AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1130530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1130530 MtrunA17_Chr7g0275711 96.645 626 20 1 1 626 1 625 0.0 1231
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1130530 AT3G61800.1 51.223 654 259 12 13 626 8 641 0.0 607
Msa1130530 AT3G61800.2 51.223 654 259 12 13 626 8 641 0.0 607

Find 151 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTATCACTACTCATATTT+TGG 0.084349 7_3:+82677583 None:intergenic
GAATATGTATAAATAAATTT+AGG 0.099260 7_3:-82679205 Msa1130530:five_prime_UTR
TGAAGAGTTCGTCAATTATT+TGG 0.177904 7_3:+82678468 None:intergenic
ACTTGCTTCTCAAACCTTAA+TGG 0.182401 7_3:-82678972 Msa1130530:CDS
TCAGTTAACTTGTATGATTT+TGG 0.224015 7_3:-82676757 Msa1130530:three_prime_UTR
GGTGGTTCATTACTCCAATT+TGG 0.240451 7_3:-82679002 Msa1130530:CDS
TTCAATTCAAAATCAGATAA+AGG 0.253513 7_3:-82679179 Msa1130530:five_prime_UTR
GCTTGAGGACTTTCGCTCTT+TGG 0.264270 7_3:-82677997 Msa1130530:CDS
TCAAGAATGGGTTTCTGTTC+TGG 0.266520 7_3:-82677844 Msa1130530:CDS
GACTCTCATTGTTGAGAGTT+TGG 0.271333 7_3:-82678426 Msa1130530:CDS
ACTTCAAGATCAGCCGCTTT+TGG 0.271514 7_3:-82676946 Msa1130530:CDS
ATGAAAATTTGTCCATTTCA+TGG 0.272246 7_3:-82677216 Msa1130530:CDS
ACGCTTCATGAGATCCATTA+AGG 0.280350 7_3:+82678958 None:intergenic
CCCCTCTCAGTTCAAATAAT+TGG 0.283562 7_3:+82676641 None:intergenic
TAACTGATTTAACACGGTTT+TGG 0.295994 7_3:+82677760 None:intergenic
AATATGTATAAATAAATTTA+GGG 0.296062 7_3:-82679204 Msa1130530:five_prime_UTR
GGGGTTCTCACTTGGATACT+TGG 0.305283 7_3:-82677440 Msa1130530:CDS
GTGCAAAACTTGCTAAAATT+CGG 0.324391 7_3:-82677011 Msa1130530:CDS
TGTCCTTGAGTGTTGGGTTT+CGG 0.338318 7_3:-82678394 Msa1130530:CDS
GAAAAGAGAAATTGATAAAC+AGG 0.344103 7_3:-82677043 Msa1130530:CDS
ATTCAGAGATTCTACTTTGA+AGG 0.352140 7_3:-82677796 Msa1130530:CDS
TGAGCTTTAGTGTATTCTTC+AGG 0.353508 7_3:+82678243 None:intergenic
AGCAAGTCGGAGCTCCAAAT+TGG 0.355542 7_3:+82678988 None:intergenic
TCCACATTAGCTTGTATGTT+AGG 0.356001 7_3:+82678215 None:intergenic
GATGCAACAGACGGAGGGGC+AGG 0.359769 7_3:+82678356 None:intergenic
TCAATTCAAAATCAGATAAA+GGG 0.362374 7_3:-82679178 Msa1130530:five_prime_UTR
GAGAAGTGGAATGTTTCGTT+TGG 0.373506 7_3:-82678302 Msa1130530:CDS
TCATCATCTCGAGGAATAAT+AGG 0.380344 7_3:+82677192 None:intergenic
CAATGGCCTTTGTACGCAAA+AGG 0.381816 7_3:+82678333 None:intergenic
AGTTAATGTCCTTGAGTGTT+GGG 0.381948 7_3:-82678400 Msa1130530:CDS
TGCAAAACTTGCTAAAATTC+GGG 0.384462 7_3:-82677010 Msa1130530:CDS
GCGGGAGCTATACAAACTTC+TGG 0.386282 7_3:-82677889 Msa1130530:CDS
AGAAGTGGAATGTTTCGTTT+GGG 0.387150 7_3:-82678301 Msa1130530:CDS
AATTTCTGAATTGAGTGTTC+CGG 0.389243 7_3:-82677322 Msa1130530:CDS
GGGTTCTCACTTGGATACTT+GGG 0.398806 7_3:-82677439 Msa1130530:CDS
CATTACAGACAGCTTAGATT+AGG 0.400928 7_3:-82678275 Msa1130530:CDS
GATTGGATCTTGAAAGTCAT+TGG 0.404975 7_3:-82677383 Msa1130530:CDS
GACAAAGAGAAGTAGTAGTT+TGG 0.405051 7_3:-82676540 Msa1130530:three_prime_UTR
TGTGAGATTGAGATTGAGAT+TGG 0.405878 7_3:-82679153 Msa1130530:five_prime_UTR
CCATCTTACCACAGGAGCTT+TGG 0.407101 7_3:+82677461 None:intergenic
GCCGTGCTCCTTTGAGAAAA+GGG 0.408275 7_3:-82677260 Msa1130530:CDS
ACAGACGGAGGGGCAGGGAG+CGG 0.413891 7_3:+82678362 None:intergenic
TGCCGTGCTCCTTTGAGAAA+AGG 0.415320 7_3:-82677261 Msa1130530:CDS
CTTGGTTTCCATTCAAGAAT+GGG 0.416261 7_3:-82677856 Msa1130530:CDS
AAGCTAATGTGGAGAGGATT+CGG 0.418840 7_3:-82678205 Msa1130530:CDS
AACACTGACAGCCTACTTCA+TGG 0.429399 7_3:-82677528 Msa1130530:CDS
CCAAAGCTCCTGTGGTAAGA+TGG 0.429788 7_3:-82677461 Msa1130530:CDS
TAAACTCATCAAAACTTGAC+GGG 0.431421 7_3:-82677704 Msa1130530:CDS
ACTTGGTTTCCATTCAAGAA+TGG 0.435377 7_3:-82677857 Msa1130530:CDS
TATGGCCAACCAGCGGGGAT+TGG 0.436674 7_3:-82677400 Msa1130530:CDS
ATTGGATCTTGAAAGTCATT+GGG 0.440525 7_3:-82677382 Msa1130530:CDS
TGGGAAGTTGATGCCACGTC+AGG 0.445034 7_3:+82677603 None:intergenic
ATGGAAAAGGAGCGAAGGTT+AGG 0.446317 7_3:-82679096 Msa1130530:CDS
CTAAACTCATCAAAACTTGA+CGG 0.453308 7_3:-82677705 Msa1130530:CDS
CACACCAGATGGGGTTTCAA+TGG 0.456189 7_3:+82677647 None:intergenic
GGAATAATAGGTCCATGAAA+TGG 0.457015 7_3:+82677204 None:intergenic
GAAGAAGGCGAAAGAGAAGA+AGG 0.458533 7_3:-82679121 Msa1130530:CDS
CAGTTAATGTCCTTGAGTGT+TGG 0.460515 7_3:-82678401 Msa1130530:CDS
ATGCAACAGACGGAGGGGCA+GGG 0.465331 7_3:+82678357 None:intergenic
CATGTTGCTATCTGCAAAGC+AGG 0.471252 7_3:+82676379 None:intergenic
CAAAGCTCCTGTGGTAAGAT+GGG 0.471408 7_3:-82677460 Msa1130530:CDS
AGGAGCAATTGAGCACGAAA+TGG 0.472494 7_3:-82679227 Msa1130530:five_prime_UTR
AGATTAATTAGGATCAGTTA+AGG 0.476107 7_3:-82676562 Msa1130530:three_prime_UTR
TAGCTAGCATTTGTCAATTG+AGG 0.481234 7_3:-82676808 Msa1130530:three_prime_UTR
TCAAAGGAGCACGGCATGGT+TGG 0.482748 7_3:+82677268 None:intergenic
AAAGGGATGCAACAGACGGA+GGG 0.483326 7_3:+82678351 None:intergenic
TTGTCTGATGACTGATTGCT+CGG 0.485123 7_3:-82676728 Msa1130530:three_prime_UTR
ACCAATTATTTGAACTGAGA+GGG 0.485433 7_3:-82676642 Msa1130530:three_prime_UTR
AATTCAGAAATTATATCTGA+TGG 0.490481 7_3:+82677333 None:intergenic
AATAAATTTGCAACATCCAC+AGG 0.493886 7_3:+82676416 None:intergenic
ACACTGACAGCCTACTTCAT+GGG 0.496310 7_3:-82677527 Msa1130530:CDS
AGATTGAGATTGGATAGGTA+TGG 0.496541 7_3:-82679143 Msa1130530:exon
AGAGAAGAAGGGAATGGAAA+AGG 0.500826 7_3:-82679109 Msa1130530:CDS
GGCGAAAGAGAAGAAGGGAA+TGG 0.503524 7_3:-82679115 Msa1130530:CDS
AACAGAAACCCATTCTTGAA+TGG 0.505019 7_3:+82677848 None:intergenic
CGTCGTGAAGCATTGAATGA+AGG 0.506233 7_3:-82677960 Msa1130530:CDS
AATGGCCTTTGTACGCAAAA+GGG 0.509485 7_3:+82678334 None:intergenic
ATTATTCCTCGAGATGATGA+AGG 0.512319 7_3:-82677189 Msa1130530:CDS
AGAGGATTCGGCAAGAGAGA+AGG 0.518182 7_3:-82678193 Msa1130530:CDS
GGTAAGATGGGGTTCTCACT+TGG 0.521435 7_3:-82677448 Msa1130530:CDS
GTCAAAAGTTTACTCCTCAG+AGG 0.527239 7_3:+82677483 None:intergenic
CGTCAATTATTTGGAGTGCA+AGG 0.528658 7_3:+82678477 None:intergenic
TCTACGATGGAGGAGATTGA+TGG 0.530605 7_3:-82678083 Msa1130530:CDS
TATTATCAGGCACACCAGAT+GGG 0.532703 7_3:+82677637 None:intergenic
ACTTCTGGTGACAAAGCACT+TGG 0.540008 7_3:-82677874 Msa1130530:CDS
AGGAGGCGGTGATCGACATC+CGG 0.540708 7_3:+82679040 None:intergenic
GGTGATGTAGGGCGCAAGTA+AGG 0.545777 7_3:-82679247 Msa1130530:five_prime_UTR
CTCATCATCTTCTCCAAAAG+CGG 0.546653 7_3:+82676933 None:intergenic
GAGGATTCGGCAAGAGAGAA+GGG 0.547375 7_3:-82678192 Msa1130530:CDS
GTCGTGAAGCATTGAATGAA+GGG 0.550115 7_3:-82677959 Msa1130530:CDS
TTAACATTCATGTCTTCTGA+AGG 0.550553 7_3:+82677147 None:intergenic
TTATTATCAGGCACACCAGA+TGG 0.551120 7_3:+82677636 None:intergenic
AAGAAGGCGAAAGAGAAGAA+GGG 0.554761 7_3:-82679120 Msa1130530:CDS
AGAGAAGGGAGAGGGAGATG+AGG 0.558791 7_3:-82678178 Msa1130530:CDS
AAAAGGGATGCAACAGACGG+AGG 0.562638 7_3:+82678350 None:intergenic
GGTTCTCACTTGGATACTTG+GGG 0.562903 7_3:-82677438 Msa1130530:CDS
CTTAGACGATGAAGAGCTTG+AGG 0.566022 7_3:-82678012 Msa1130530:CDS
TCAAAAGTTTACTCCTCAGA+GGG 0.569727 7_3:+82677484 None:intergenic
CACTGACAGCCTACTTCATG+GGG 0.569874 7_3:-82677526 Msa1130530:CDS
GTATCCATTGAAACCCCATC+TGG 0.569924 7_3:-82677651 Msa1130530:CDS
GGCAACAAATTCCACCGCAC+CGG 0.571423 7_3:-82679059 Msa1130530:CDS
GTGATCGACATCCGGTGCGG+TGG 0.573761 7_3:+82679048 None:intergenic
ATCTTGAAAGTCATTGGGGT+AGG 0.574477 7_3:-82677377 Msa1130530:CDS
TTCGGCAAGAGAGAAGGGAG+AGG 0.578002 7_3:-82678187 Msa1130530:CDS
TAATTGGTCTCATGATCCAC+AGG 0.578648 7_3:+82676657 None:intergenic
GACCAATTATTTGAACTGAG+AGG 0.582856 7_3:-82676643 Msa1130530:three_prime_UTR
GATTGAGATTGAGATTGGAT+AGG 0.582875 7_3:-82679148 Msa1130530:five_prime_UTR
TTTCAAGATCCAATCCCCGC+TGG 0.583117 7_3:+82677391 None:intergenic
AAGATCCAATCCCCGCTGGT+TGG 0.583660 7_3:+82677395 None:intergenic
GGATACTTGGGGTTCAAACA+AGG 0.586225 7_3:-82677427 Msa1130530:CDS
TCGCCGAAACCCAACACTCA+AGG 0.592782 7_3:+82678391 None:intergenic
CGCAAAAGGGATGCAACAGA+CGG 0.595656 7_3:+82678347 None:intergenic
AGGGAATGGAAAAGGAGCGA+AGG 0.595700 7_3:-82679101 Msa1130530:CDS
TCCTAACATACAAGCTAATG+TGG 0.595760 7_3:-82678216 Msa1130530:CDS
TTATGAAAGCAGTGATAACA+AGG 0.597508 7_3:-82677928 Msa1130530:CDS
TCTTGAAAGTCATTGGGGTA+GGG 0.598282 7_3:-82677376 Msa1130530:CDS
GATTGGATAGGTATGGAAGA+AGG 0.598556 7_3:-82679136 Msa1130530:exon
ATTATCAGGCACACCAGATG+GGG 0.602798 7_3:+82677638 None:intergenic
CATGAAGCGTGATCACTCCC+AGG 0.603510 7_3:-82678945 Msa1130530:intron
CCTCCTCAAAGCAATCAAAA+CGG 0.603835 7_3:-82679023 Msa1130530:CDS
TTTCTCAAAGGAGCACGGCA+TGG 0.606475 7_3:+82677264 None:intergenic
TGTTCGTGAAACAGACAAGA+AGG 0.608437 7_3:-82677073 Msa1130530:CDS
CCAATTATTTGAACTGAGAG+GGG 0.608650 7_3:-82676641 Msa1130530:three_prime_UTR
TTTGAGTAAAGCCTTGCCTG+TGG 0.609433 7_3:-82676673 Msa1130530:three_prime_UTR
CCGTGCTCCTTTGAGAAAAG+GGG 0.616217 7_3:-82677259 Msa1130530:CDS
AGCTTCCCTTCATCATCTCG+AGG 0.617559 7_3:+82677183 None:intergenic
TTATTCCTCGAGATGATGAA+GGG 0.619534 7_3:-82677188 Msa1130530:CDS
TGTCTGATGACTGATTGCTC+GGG 0.626167 7_3:-82676727 Msa1130530:three_prime_UTR
GAAGTGGAATGTTTCGTTTG+GGG 0.626587 7_3:-82678300 Msa1130530:CDS
TGAGAACCCCATCTTACCAC+AGG 0.626927 7_3:+82677453 None:intergenic
AGAGATACTGTCTACGATGG+AGG 0.627724 7_3:-82678093 Msa1130530:CDS
ACAATTTCACAGAAAATGTG+AGG 0.635813 7_3:+82676487 None:intergenic
TCGGCAAGAGAGAAGGGAGA+GGG 0.636680 7_3:-82678186 Msa1130530:CDS
GGGAGAGATACTGTCTACGA+TGG 0.642323 7_3:-82678096 Msa1130530:CDS
CGTGCTCCTTTGAGAAAAGG+GGG 0.646992 7_3:-82677258 Msa1130530:CDS
CTACGATGGAGGAGATTGAT+GGG 0.647781 7_3:-82678082 Msa1130530:CDS
TGGCAATTGATGTTGTCCTG+TGG 0.647996 7_3:-82676432 Msa1130530:three_prime_UTR
GGTCTCATGATCCACAGGCA+AGG 0.649521 7_3:+82676662 None:intergenic
TTAAGGTTTGAGAAGCAAGT+CGG 0.651226 7_3:+82678975 None:intergenic
TCGTGAAGCATTGAATGAAG+GGG 0.651545 7_3:-82677958 Msa1130530:CDS
AAAGCTCCTGTGGTAAGATG+GGG 0.652782 7_3:-82677459 Msa1130530:CDS
AAGGGATGCAACAGACGGAG+GGG 0.656411 7_3:+82678352 None:intergenic
AATCAGAGTCAAACCCTCTG+AGG 0.661720 7_3:-82677497 Msa1130530:CDS
CAATTATTTGAACTGAGAGG+GGG 0.663885 7_3:-82676640 Msa1130530:three_prime_UTR
AATATGAGTAGTGATAAACT+TGG 0.665201 7_3:-82677579 Msa1130530:CDS
ACATACAAGCTAATGTGGAG+AGG 0.665961 7_3:-82678211 Msa1130530:CDS
TTGGATCTTGAAAGTCATTG+GGG 0.668632 7_3:-82677381 Msa1130530:CDS
AAACTCATCAAAACTTGACG+GGG 0.674187 7_3:-82677703 Msa1130530:CDS
CCTCAAAGCAATCAAAACGG+TGG 0.690187 7_3:-82679020 Msa1130530:CDS
TCGTGAAACAGACAAGAAGG+TGG 0.730580 7_3:-82677070 Msa1130530:CDS
ACTGACAGCCTACTTCATGG+GGG 0.785079 7_3:-82677525 Msa1130530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATATGTATAAATAAATTT+AGG - chr7_3:82676421-82676440 Msa1130530:three_prime_UTR 10.0%
!!! TTTTTTTAACTGATTTAACA+CGG + chr7_3:82677875-82677894 None:intergenic 15.0%
!! TTCAATTCAAAATCAGATAA+AGG - chr7_3:82676447-82676466 Msa1130530:three_prime_UTR 20.0%
!! TCAATTCAAAATCAGATAAA+GGG - chr7_3:82676448-82676467 Msa1130530:three_prime_UTR 20.0%
!! AGGAATTAAATAAAATACCT+GGG + chr7_3:82676701-82676720 None:intergenic 20.0%
!!! ATCAAAAAATTGCTTTTGTT+TGG - chr7_3:82676845-82676864 Msa1130530:CDS 20.0%
!!! TAACAAAAGCAATTTTATGA+TGG + chr7_3:82676876-82676895 None:intergenic 20.0%
!! AAAACTATATCAAAGGTAAT+AGG - chr7_3:82676989-82677008 Msa1130530:CDS 20.0%
!! AGTTGATTATATCTACAATA+AGG + chr7_3:82677042-82677061 None:intergenic 20.0%
!!! AGAGAAATTTTCTTCAATAA+AGG - chr7_3:82677509-82677528 Msa1130530:CDS 20.0%
!!! GAGAAATTTTCTTCAATAAA+GGG - chr7_3:82677510-82677529 Msa1130530:CDS 20.0%
!!! TTTATCACTACTCATATTTT+GGG + chr7_3:82678045-82678064 None:intergenic 20.0%
!! AATTCAGAAATTATATCTGA+TGG + chr7_3:82678296-82678315 None:intergenic 20.0%
!!! TTTATCAATTTCTCTTTTCT+TGG + chr7_3:82678582-82678601 None:intergenic 20.0%
!! TGTAAGGAAAAATAAATGAA+TGG + chr7_3:82679027-82679046 None:intergenic 20.0%
! GAGGAATTAAATAAAATACC+TGG + chr7_3:82676702-82676721 None:intergenic 25.0%
! TTTGATTCTTATAATTGCCA+CGG - chr7_3:82676751-82676770 Msa1130530:three_prime_UTR 25.0%
!! ATGTTGAATTCTTTGGATTT+TGG - chr7_3:82676777-82676796 Msa1130530:three_prime_UTR 25.0%
! TCTAAGGAAAACTATATCAA+AGG - chr7_3:82676982-82677001 Msa1130530:CDS 25.0%
! ATCAGTTAAAAAAAGATGTG+AGG - chr7_3:82677881-82677900 Msa1130530:CDS 25.0%
!!! GGATGTTTGTTTTTATTATC+AGG + chr7_3:82678005-82678024 None:intergenic 25.0%
!! GTTTATCACTACTCATATTT+TGG + chr7_3:82678046-82678065 None:intergenic 25.0%
! AATATGAGTAGTGATAAACT+TGG - chr7_3:82678047-82678066 Msa1130530:CDS 25.0%
!!! TCAATTTGCTTTTCTTCATA+AGG + chr7_3:82678335-82678354 None:intergenic 25.0%
! ATGAAAATTTGTCCATTTCA+TGG - chr7_3:82678410-82678429 Msa1130530:CDS 25.0%
! GAAAAGAGAAATTGATAAAC+AGG - chr7_3:82678583-82678602 Msa1130530:intron 25.0%
!!! TCAGTTAACTTGTATGATTT+TGG - chr7_3:82678869-82678888 Msa1130530:intron 25.0%
! CCTAAGAAAAAATAACTGTA+AGG + chr7_3:82679043-82679062 None:intergenic 25.0%
!!! CCTTACAGTTATTTTTTCTT+AGG - chr7_3:82679040-82679059 Msa1130530:CDS 25.0%
!! TTTTCTTAGGCAGATTAATT+AGG - chr7_3:82679053-82679072 Msa1130530:CDS 25.0%
! AGATTAATTAGGATCAGTTA+AGG - chr7_3:82679064-82679083 Msa1130530:CDS 25.0%
!!! GTGAAATTGTTTTGTATAGT+AGG - chr7_3:82679152-82679171 Msa1130530:five_prime_UTR 25.0%
!! GGTTAGGTTTTTGATTGAAA+AGG - chr7_3:82676546-82676565 Msa1130530:three_prime_UTR 30.0%
ATCATGAAACTATACAAGAG+AGG - chr7_3:82676818-82676837 Msa1130530:exon 30.0%
TCATGAAACTATACAAGAGA+GGG - chr7_3:82676819-82676838 Msa1130530:exon 30.0%
CTAAAAGCGATTTCAACAAT+AGG - chr7_3:82676896-82676915 Msa1130530:CDS 30.0%
TCAATTTAGACGACTATCTA+AGG - chr7_3:82676966-82676985 Msa1130530:CDS 30.0%
TAGGATGAGAGAATAAATGA+TGG - chr7_3:82677008-82677027 Msa1130530:CDS 30.0%
ATATCAATCCATGTCAACAA+GGG + chr7_3:82677112-82677131 None:intergenic 30.0%
!! ATTGATATGTGTTTCAGGTT+AGG - chr7_3:82677124-82677143 Msa1130530:CDS 30.0%
TGAAGAGTTCGTCAATTATT+TGG + chr7_3:82677161-82677180 None:intergenic 30.0%
! TACAAAGGCCATTGAATTTT+TGG - chr7_3:82677302-82677321 Msa1130530:CDS 30.0%
! AGACATTTTGCATTCAAAAC+AGG - chr7_3:82677572-82677591 Msa1130530:CDS 30.0%
TTATGAAAGCAGTGATAACA+AGG - chr7_3:82677698-82677717 Msa1130530:CDS 30.0%
ATTCAGAGATTCTACTTTGA+AGG - chr7_3:82677830-82677849 Msa1130530:CDS 30.0%
!! TAACTGATTTAACACGGTTT+TGG + chr7_3:82677869-82677888 None:intergenic 30.0%
AGTTAAAAAAAGATGTGAGG+AGG - chr7_3:82677884-82677903 Msa1130530:CDS 30.0%
CTAAACTCATCAAAACTTGA+CGG - chr7_3:82677921-82677940 Msa1130530:CDS 30.0%
TAAACTCATCAAAACTTGAC+GGG - chr7_3:82677922-82677941 Msa1130530:CDS 30.0%
ATTGGATCTTGAAAGTCATT+GGG - chr7_3:82678244-82678263 Msa1130530:CDS 30.0%
AATTTCTGAATTGAGTGTTC+CGG - chr7_3:82678304-82678323 Msa1130530:CDS 30.0%
TTAACATTCATGTCTTCTGA+AGG + chr7_3:82678482-82678501 None:intergenic 30.0%
!! GTGCAAAACTTGCTAAAATT+CGG - chr7_3:82678615-82678634 Msa1130530:intron 30.0%
!! TGCAAAACTTGCTAAAATTC+GGG - chr7_3:82678616-82678635 Msa1130530:intron 30.0%
! AACACAATGATGCAGTTTTA+CGG - chr7_3:82678639-82678658 Msa1130530:intron 30.0%
ACCAATTATTTGAACTGAGA+GGG - chr7_3:82678984-82679003 Msa1130530:CDS 30.0%
ACAATTTCACAGAAAATGTG+AGG + chr7_3:82679142-82679161 None:intergenic 30.0%
AATAAATTTGCAACATCCAC+AGG + chr7_3:82679213-82679232 None:intergenic 30.0%
TGTGAGATTGAGATTGAGAT+TGG - chr7_3:82676473-82676492 Msa1130530:three_prime_UTR 35.0%
GATTGAGATTGAGATTGGAT+AGG - chr7_3:82676478-82676497 Msa1130530:three_prime_UTR 35.0%
AGATTGAGATTGGATAGGTA+TGG - chr7_3:82676483-82676502 Msa1130530:three_prime_UTR 35.0%
TTAAGGTTTGAGAAGCAAGT+CGG + chr7_3:82676654-82676673 None:intergenic 35.0%
ACTTGCTTCTCAAACCTTAA+TGG - chr7_3:82676654-82676673 Msa1130530:three_prime_UTR 35.0%
!! TCAACAAGGGGGTTTTATAT+TGG + chr7_3:82677099-82677118 None:intergenic 35.0%
TATCAATCCATGTCAACAAG+GGG + chr7_3:82677111-82677130 None:intergenic 35.0%
CATATCAATCCATGTCAACA+AGG + chr7_3:82677113-82677132 None:intergenic 35.0%
! CATGGATTGATATGTGTTTC+AGG - chr7_3:82677119-82677138 Msa1130530:CDS 35.0%
! TCATGCGATCAAAGCTTTTT+AGG - chr7_3:82677178-82677197 Msa1130530:CDS 35.0%
AGTTAATGTCCTTGAGTGTT+GGG - chr7_3:82677226-82677245 Msa1130530:CDS 35.0%
CCACTTCTCCAAAAATTCAA+TGG + chr7_3:82677313-82677332 None:intergenic 35.0%
!! CCATTGAATTTTTGGAGAAG+TGG - chr7_3:82677310-82677329 Msa1130530:CDS 35.0%
AGAAGTGGAATGTTTCGTTT+GGG - chr7_3:82677325-82677344 Msa1130530:CDS 35.0%
CATTACAGACAGCTTAGATT+AGG - chr7_3:82677351-82677370 Msa1130530:CDS 35.0%
! TGAGCTTTAGTGTATTCTTC+AGG + chr7_3:82677386-82677405 None:intergenic 35.0%
TCCTAACATACAAGCTAATG+TGG - chr7_3:82677410-82677429 Msa1130530:CDS 35.0%
!! TCCACATTAGCTTGTATGTT+AGG + chr7_3:82677414-82677433 None:intergenic 35.0%
! AGGTAGTTTTTGATGCATTG+CGG - chr7_3:82677718-82677737 Msa1130530:CDS 35.0%
ACTTGGTTTCCATTCAAGAA+TGG - chr7_3:82677769-82677788 Msa1130530:CDS 35.0%
CTTGGTTTCCATTCAAGAAT+GGG - chr7_3:82677770-82677789 Msa1130530:CDS 35.0%
AACAGAAACCCATTCTTGAA+TGG + chr7_3:82677781-82677800 None:intergenic 35.0%
AAACTCATCAAAACTTGACG+GGG - chr7_3:82677923-82677942 Msa1130530:CDS 35.0%
TAAAAACAAACATCCTGACG+TGG - chr7_3:82678010-82678029 Msa1130530:CDS 35.0%
TCAAAAGTTTACTCCTCAGA+GGG + chr7_3:82678145-82678164 None:intergenic 35.0%
! GGGTTCAAACAAGGTTTTTA+TGG - chr7_3:82678208-82678227 Msa1130530:CDS 35.0%
GATTGGATCTTGAAAGTCAT+TGG - chr7_3:82678243-82678262 Msa1130530:CDS 35.0%
TTGGATCTTGAAAGTCATTG+GGG - chr7_3:82678245-82678264 Msa1130530:CDS 35.0%
!!! TTTTCTTCATAAGGCATTGC+CGG + chr7_3:82678326-82678345 None:intergenic 35.0%
GGAATAATAGGTCCATGAAA+TGG + chr7_3:82678425-82678444 None:intergenic 35.0%
TCATCATCTCGAGGAATAAT+AGG + chr7_3:82678437-82678456 None:intergenic 35.0%
ATTATTCCTCGAGATGATGA+AGG - chr7_3:82678437-82678456 Msa1130530:CDS 35.0%
TTATTCCTCGAGATGATGAA+GGG - chr7_3:82678438-82678457 Msa1130530:CDS 35.0%
! ACACAATGATGCAGTTTTAC+GGG - chr7_3:82678640-82678659 Msa1130530:intron 35.0%
!!! CGTTACTTTCTTTTTCAGCA+TGG + chr7_3:82678753-82678772 None:intergenic 35.0%
TAGCTAGCATTTGTCAATTG+AGG - chr7_3:82678818-82678837 Msa1130530:intron 35.0%
GACCAATTATTTGAACTGAG+AGG - chr7_3:82678983-82679002 Msa1130530:CDS 35.0%
CCAATTATTTGAACTGAGAG+GGG - chr7_3:82678985-82679004 Msa1130530:CDS 35.0%
CAATTATTTGAACTGAGAGG+GGG - chr7_3:82678986-82679005 Msa1130530:CDS 35.0%
GACAAAGAGAAGTAGTAGTT+TGG - chr7_3:82679086-82679105 Msa1130530:CDS 35.0%
! TTGCCAAGTTTTTAATCCTC+TGG + chr7_3:82679180-82679199 None:intergenic 35.0%
GATTGGATAGGTATGGAAGA+AGG - chr7_3:82676490-82676509 Msa1130530:three_prime_UTR 40.0%
AAGAAGGCGAAAGAGAAGAA+GGG - chr7_3:82676506-82676525 Msa1130530:three_prime_UTR 40.0%
AGAGAAGAAGGGAATGGAAA+AGG - chr7_3:82676517-82676536 Msa1130530:three_prime_UTR 40.0%
!!! TTTTGATTGCTTTGAGGAGG+CGG + chr7_3:82676603-82676622 None:intergenic 40.0%
CCTCCTCAAAGCAATCAAAA+CGG - chr7_3:82676603-82676622 Msa1130530:three_prime_UTR 40.0%
GGTGGTTCATTACTCCAATT+TGG - chr7_3:82676624-82676643 Msa1130530:three_prime_UTR 40.0%
ACGCTTCATGAGATCCATTA+AGG + chr7_3:82676671-82676690 None:intergenic 40.0%
ATTCCTCTCGCTCTCTAATT+AGG - chr7_3:82676715-82676734 Msa1130530:three_prime_UTR 40.0%
TTCCTCTCGCTCTCTAATTA+GGG - chr7_3:82676716-82676735 Msa1130530:three_prime_UTR 40.0%
AAAGAATTCAACATCGACCG+TGG + chr7_3:82676771-82676790 None:intergenic 40.0%
ACGGTCGATGTTGAATTCTT+TGG - chr7_3:82676770-82676789 Msa1130530:three_prime_UTR 40.0%
!! AGGGGGTTTTATATTGGACA+TGG + chr7_3:82677093-82677112 None:intergenic 40.0%
ATAAAACCCCCTTGTTGACA+TGG - chr7_3:82677101-82677120 Msa1130530:CDS 40.0%
ATCAATCCATGTCAACAAGG+GGG + chr7_3:82677110-82677129 None:intergenic 40.0%
! CGTCAATTATTTGGAGTGCA+AGG + chr7_3:82677152-82677171 None:intergenic 40.0%
GACTCTCATTGTTGAGAGTT+TGG - chr7_3:82677200-82677219 Msa1130530:CDS 40.0%
CAGTTAATGTCCTTGAGTGT+TGG - chr7_3:82677225-82677244 Msa1130530:CDS 40.0%
AATGGCCTTTGTACGCAAAA+GGG + chr7_3:82677295-82677314 None:intergenic 40.0%
GAGAAGTGGAATGTTTCGTT+TGG - chr7_3:82677324-82677343 Msa1130530:CDS 40.0%
GAAGTGGAATGTTTCGTTTG+GGG - chr7_3:82677326-82677345 Msa1130530:CDS 40.0%
ACATACAAGCTAATGTGGAG+AGG - chr7_3:82677415-82677434 Msa1130530:CDS 40.0%
AAGCTAATGTGGAGAGGATT+CGG - chr7_3:82677421-82677440 Msa1130530:CDS 40.0%
!! GTCGTGAAGCATTGAATGAA+GGG - chr7_3:82677667-82677686 Msa1130530:CDS 40.0%
!! TCGTGAAGCATTGAATGAAG+GGG - chr7_3:82677668-82677687 Msa1130530:CDS 40.0%
! GGTAGTTTTTGATGCATTGC+GGG - chr7_3:82677719-82677738 Msa1130530:CDS 40.0%
! TCAAGAATGGGTTTCTGTTC+TGG - chr7_3:82677782-82677801 Msa1130530:CDS 40.0%
AAAAAAAGATGTGAGGAGGC+AGG - chr7_3:82677888-82677907 Msa1130530:CDS 40.0%
! TTGACGGGGAAGAAGATTTT+TGG - chr7_3:82677937-82677956 Msa1130530:CDS 40.0%
! TGACGGGGAAGAAGATTTTT+GGG - chr7_3:82677938-82677957 Msa1130530:CDS 40.0%
!! GAAGAAGATTTTTGGGAGGA+GGG - chr7_3:82677945-82677964 Msa1130530:CDS 40.0%
!! AAGAAGATTTTTGGGAGGAG+GGG - chr7_3:82677946-82677965 Msa1130530:CDS 40.0%
TATTATCAGGCACACCAGAT+GGG + chr7_3:82677992-82678011 None:intergenic 40.0%
TTATTATCAGGCACACCAGA+TGG + chr7_3:82677993-82678012 None:intergenic 40.0%
! ATTGATTTCCCCCATGAAGT+AGG + chr7_3:82678112-82678131 None:intergenic 40.0%
GTCAAAAGTTTACTCCTCAG+AGG + chr7_3:82678146-82678165 None:intergenic 40.0%
ATCTTGAAAGTCATTGGGGT+AGG - chr7_3:82678249-82678268 Msa1130530:CDS 40.0%
TCTTGAAAGTCATTGGGGTA+GGG - chr7_3:82678250-82678269 Msa1130530:CDS 40.0%
TGTTCGTGAAACAGACAAGA+AGG - chr7_3:82678553-82678572 Msa1130530:intron 40.0%
CTCATCATCTTCTCCAAAAG+CGG + chr7_3:82678696-82678715 None:intergenic 40.0%
!!! CTCAGAAGCTTTTGAGTTCA+CGG - chr7_3:82678789-82678808 Msa1130530:intron 40.0%
!!! TCAGAAGCTTTTGAGTTCAC+GGG - chr7_3:82678790-82678809 Msa1130530:intron 40.0%
TTGTCTGATGACTGATTGCT+CGG - chr7_3:82678898-82678917 Msa1130530:intron 40.0%
! TAATTGGTCTCATGATCCAC+AGG + chr7_3:82678972-82678991 None:intergenic 40.0%
CCCCTCTCAGTTCAAATAAT+TGG + chr7_3:82678988-82679007 None:intergenic 40.0%
! TTTTGTATAGTAGGTGCCAG+AGG - chr7_3:82679161-82679180 Msa1130530:five_prime_UTR 40.0%
GTGCCAGAGGATTAAAAACT+TGG - chr7_3:82679174-82679193 Msa1130530:five_prime_UTR 40.0%
AGGAGCAATTGAGCACGAAA+TGG - chr7_3:82676399-82676418 Msa1130530:three_prime_UTR 45.0%
GAAGAAGGCGAAAGAGAAGA+AGG - chr7_3:82676505-82676524 Msa1130530:three_prime_UTR 45.0%
ATGGAAAAGGAGCGAAGGTT+AGG - chr7_3:82676530-82676549 Msa1130530:three_prime_UTR 45.0%
!!! CCGTTTTGATTGCTTTGAGG+AGG + chr7_3:82676606-82676625 None:intergenic 45.0%
!!! CCACCGTTTTGATTGCTTTG+AGG + chr7_3:82676609-82676628 None:intergenic 45.0%
CCTCAAAGCAATCAAAACGG+TGG - chr7_3:82676606-82676625 Msa1130530:three_prime_UTR 45.0%
AACCCTAATTAGAGAGCGAG+AGG + chr7_3:82676721-82676740 None:intergenic 45.0%
!! TGTCCTTGAGTGTTGGGTTT+CGG - chr7_3:82677232-82677251 Msa1130530:CDS 45.0%
! TGCATCCCTTTTGCGTACAA+AGG - chr7_3:82677287-82677306 Msa1130530:CDS 45.0%
CAATGGCCTTTGTACGCAAA+AGG + chr7_3:82677296-82677315 None:intergenic 45.0%
AGAGATACTGTCTACGATGG+AGG - chr7_3:82677533-82677552 Msa1130530:CDS 45.0%
TCTACGATGGAGGAGATTGA+TGG - chr7_3:82677543-82677562 Msa1130530:CDS 45.0%
CTACGATGGAGGAGATTGAT+GGG - chr7_3:82677544-82677563 Msa1130530:CDS 45.0%
CTTAGACGATGAAGAGCTTG+AGG - chr7_3:82677614-82677633 Msa1130530:CDS 45.0%
!! CGTCGTGAAGCATTGAATGA+AGG - chr7_3:82677666-82677685 Msa1130530:CDS 45.0%
! ACTTCTGGTGACAAAGCACT+TGG - chr7_3:82677752-82677771 Msa1130530:CDS 45.0%
!! GGAAGAAGATTTTTGGGAGG+AGG - chr7_3:82677944-82677963 Msa1130530:CDS 45.0%
GTATCCATTGAAACCCCATC+TGG - chr7_3:82677975-82677994 Msa1130530:CDS 45.0%
ATTATCAGGCACACCAGATG+GGG + chr7_3:82677991-82678010 None:intergenic 45.0%
AACACTGACAGCCTACTTCA+TGG - chr7_3:82678098-82678117 Msa1130530:CDS 45.0%
ACACTGACAGCCTACTTCAT+GGG - chr7_3:82678099-82678118 Msa1130530:CDS 45.0%
AATCAGAGTCAAACCCTCTG+AGG - chr7_3:82678129-82678148 Msa1130530:CDS 45.0%
! ACTTTTGACCAAAGCTCCTG+TGG - chr7_3:82678157-82678176 Msa1130530:CDS 45.0%
CAAAGCTCCTGTGGTAAGAT+GGG - chr7_3:82678166-82678185 Msa1130530:CDS 45.0%
AAAGCTCCTGTGGTAAGATG+GGG - chr7_3:82678167-82678186 Msa1130530:CDS 45.0%
GGGTTCTCACTTGGATACTT+GGG - chr7_3:82678187-82678206 Msa1130530:CDS 45.0%
GGTTCTCACTTGGATACTTG+GGG - chr7_3:82678188-82678207 Msa1130530:CDS 45.0%
GGATACTTGGGGTTCAAACA+AGG - chr7_3:82678199-82678218 Msa1130530:CDS 45.0%
! AGGTTTTTATGGCCAACCAG+CGG - chr7_3:82678219-82678238 Msa1130530:CDS 45.0%
TCGTGAAACAGACAAGAAGG+TGG - chr7_3:82678556-82678575 Msa1130530:intron 45.0%
! AGTTTTACGGGATGCTGCAT+TGG - chr7_3:82678652-82678671 Msa1130530:intron 45.0%
!! ACTTCAAGATCAGCCGCTTT+TGG - chr7_3:82678680-82678699 Msa1130530:intron 45.0%
!! CGCTTTTGGAGAAGATGATG+AGG - chr7_3:82678694-82678713 Msa1130530:intron 45.0%
TGTCTGATGACTGATTGCTC+GGG - chr7_3:82678899-82678918 Msa1130530:intron 45.0%
TTTGAGTAAAGCCTTGCCTG+TGG - chr7_3:82678953-82678972 Msa1130530:CDS 45.0%
TTATTTGAACTGAGAGGGGG+AGG - chr7_3:82678989-82679008 Msa1130530:CDS 45.0%
TATTTGAACTGAGAGGGGGA+GGG - chr7_3:82678990-82679009 Msa1130530:CDS 45.0%
TGGCAATTGATGTTGTCCTG+TGG - chr7_3:82679194-82679213 Msa1130530:five_prime_UTR 45.0%
!! AATATGTATAAATAAATTTA+GGG - chr7_3:82676422-82676441 Msa1130530:three_prime_UTR 5.0%
GGCGAAAGAGAAGAAGGGAA+TGG - chr7_3:82676511-82676530 Msa1130530:three_prime_UTR 50.0%
AGGGAATGGAAAAGGAGCGA+AGG - chr7_3:82676525-82676544 Msa1130530:three_prime_UTR 50.0%
AGCAAGTCGGAGCTCCAAAT+TGG + chr7_3:82676641-82676660 None:intergenic 50.0%
AAAGGGATGCAACAGACGGA+GGG + chr7_3:82677278-82677297 None:intergenic 50.0%
AAAAGGGATGCAACAGACGG+AGG + chr7_3:82677279-82677298 None:intergenic 50.0%
CGCAAAAGGGATGCAACAGA+CGG + chr7_3:82677282-82677301 None:intergenic 50.0%
AGAGGATTCGGCAAGAGAGA+AGG - chr7_3:82677433-82677452 Msa1130530:CDS 50.0%
GAGGATTCGGCAAGAGAGAA+GGG - chr7_3:82677434-82677453 Msa1130530:CDS 50.0%
GGGAGAGATACTGTCTACGA+TGG - chr7_3:82677530-82677549 Msa1130530:CDS 50.0%
GCTTGAGGACTTTCGCTCTT+TGG - chr7_3:82677629-82677648 Msa1130530:CDS 50.0%
GCGGGAGCTATACAAACTTC+TGG - chr7_3:82677737-82677756 Msa1130530:CDS 50.0%
!! CGGGGAAGAAGATTTTTGGG+AGG - chr7_3:82677941-82677960 Msa1130530:CDS 50.0%
CACACCAGATGGGGTTTCAA+TGG + chr7_3:82677982-82678001 None:intergenic 50.0%
CACTGACAGCCTACTTCATG+GGG - chr7_3:82678100-82678119 Msa1130530:CDS 50.0%
ACTGACAGCCTACTTCATGG+GGG - chr7_3:82678101-82678120 Msa1130530:CDS 50.0%
CCATCTTACCACAGGAGCTT+TGG + chr7_3:82678168-82678187 None:intergenic 50.0%
CCAAAGCTCCTGTGGTAAGA+TGG - chr7_3:82678165-82678184 Msa1130530:CDS 50.0%
TGAGAACCCCATCTTACCAC+AGG + chr7_3:82678176-82678195 None:intergenic 50.0%
GGTAAGATGGGGTTCTCACT+TGG - chr7_3:82678178-82678197 Msa1130530:CDS 50.0%
GGGGTTCTCACTTGGATACT+TGG - chr7_3:82678186-82678205 Msa1130530:CDS 50.0%
! GGTTTTTATGGCCAACCAGC+GGG - chr7_3:82678220-82678239 Msa1130530:CDS 50.0%
! GTTTTTATGGCCAACCAGCG+GGG - chr7_3:82678221-82678240 Msa1130530:CDS 50.0%
TTTCAAGATCCAATCCCCGC+TGG + chr7_3:82678238-82678257 None:intergenic 50.0%
! TTTCTCAAAGGAGCACGGCA+TGG + chr7_3:82678365-82678384 None:intergenic 50.0%
! TGCCGTGCTCCTTTGAGAAA+AGG - chr7_3:82678365-82678384 Msa1130530:CDS 50.0%
! GCCGTGCTCCTTTGAGAAAA+GGG - chr7_3:82678366-82678385 Msa1130530:CDS 50.0%
! CCCCTTTTCTCAAAGGAGCA+CGG + chr7_3:82678370-82678389 None:intergenic 50.0%
! CCGTGCTCCTTTGAGAAAAG+GGG - chr7_3:82678367-82678386 Msa1130530:CDS 50.0%
! CGTGCTCCTTTGAGAAAAGG+GGG - chr7_3:82678368-82678387 Msa1130530:CDS 50.0%
! CAGAGTCCCCCTTTTCTCAA+AGG + chr7_3:82678377-82678396 None:intergenic 50.0%
TGAGAAAAGGGGGACTCTGT+CGG - chr7_3:82678378-82678397 Msa1130530:CDS 50.0%
AGCTTCCCTTCATCATCTCG+AGG + chr7_3:82678446-82678465 None:intergenic 50.0%
GGCAACAAATTCCACCGCAC+CGG - chr7_3:82676567-82676586 Msa1130530:three_prime_UTR 55.0%
CATGAAGCGTGATCACTCCC+AGG - chr7_3:82676681-82676700 Msa1130530:three_prime_UTR 55.0%
TCGCCGAAACCCAACACTCA+AGG + chr7_3:82677238-82677257 None:intergenic 55.0%
AAGGGATGCAACAGACGGAG+GGG + chr7_3:82677277-82677296 None:intergenic 55.0%
TTCGGCAAGAGAGAAGGGAG+AGG - chr7_3:82677439-82677458 Msa1130530:CDS 55.0%
TCGGCAAGAGAGAAGGGAGA+GGG - chr7_3:82677440-82677459 Msa1130530:CDS 55.0%
AGAGAAGGGAGAGGGAGATG+AGG - chr7_3:82677448-82677467 Msa1130530:CDS 55.0%
!! TGGGAAGTTGATGCCACGTC+AGG + chr7_3:82678026-82678045 None:intergenic 55.0%
AAGATCCAATCCCCGCTGGT+TGG + chr7_3:82678234-82678253 None:intergenic 55.0%
! TCAAAGGAGCACGGCATGGT+TGG + chr7_3:82678361-82678380 None:intergenic 55.0%
GGTCTCATGATCCACAGGCA+AGG + chr7_3:82678967-82678986 None:intergenic 55.0%
AGGAGGCGGTGATCGACATC+CGG + chr7_3:82676589-82676608 None:intergenic 60.0%
ATGCAACAGACGGAGGGGCA+GGG + chr7_3:82677272-82677291 None:intergenic 60.0%
TATGGCCAACCAGCGGGGAT+TGG - chr7_3:82678226-82678245 Msa1130530:CDS 60.0%
GTGATCGACATCCGGTGCGG+TGG + chr7_3:82676581-82676600 None:intergenic 65.0%
GCGGTGATCGACATCCGGTG+CGG + chr7_3:82676584-82676603 None:intergenic 65.0%
GATGCAACAGACGGAGGGGC+AGG + chr7_3:82677273-82677292 None:intergenic 65.0%
ACAGACGGAGGGGCAGGGAG+CGG + chr7_3:82677267-82677286 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 82676382 82679266 82676382 ID=Msa1130530;Name=Msa1130530
chr7_3 mRNA 82676382 82679266 82676382 ID=Msa1130530-mRNA-1;Parent=Msa1130530;Name=Msa1130530-mRNA-1;_AED=0.00;_eAED=0.00;_QI=120|1|1|1|1|1|2|446|626
chr7_3 exon 82676382 82678507 82676382 ID=Msa1130530-mRNA-1:exon:24417;Parent=Msa1130530-mRNA-1
chr7_3 exon 82678946 82679266 82678946 ID=Msa1130530-mRNA-1:exon:24416;Parent=Msa1130530-mRNA-1
chr7_3 five_prime_UTR 82679147 82679266 82679147 ID=Msa1130530-mRNA-1:five_prime_utr;Parent=Msa1130530-mRNA-1
chr7_3 CDS 82678946 82679146 82678946 ID=Msa1130530-mRNA-1:cds;Parent=Msa1130530-mRNA-1
chr7_3 CDS 82676828 82678507 82676828 ID=Msa1130530-mRNA-1:cds;Parent=Msa1130530-mRNA-1
chr7_3 three_prime_UTR 82676382 82676827 82676382 ID=Msa1130530-mRNA-1:three_prime_utr;Parent=Msa1130530-mRNA-1
Gene Sequence

>Msa1130530

ATGGAAGAAGGCGAAAGAGAAGAAGGGAATGGAAAAGGAGCGAAGGTTAGGTTTTTGATTGAAAAGGCAACAAATTCCACCGCACCGGATGTCGATCACCGCCTCCTCAAAGCAATCAAAACGGTGGTTCATTACTCCAATTTGGAGCTCCGACTTGCTTCTCAAACCTTAATGGATCTCATGAAGCGTGATCACTCCCAGGTTAGGTACCTTGCACTCCAAATAATTGACGAACTCTTCATGCGATCAAAGCTTTTTAGGACTCTCATTGTTGAGAGTTTGGAACAGTTAATGTCCTTGAGTGTTGGGTTTCGGCGAAATTTGCCGCTCCCTGCCCCTCCGTCTGTTGCATCCCTTTTGCGTACAAAGGCCATTGAATTTTTGGAGAAGTGGAATGTTTCGTTTGGGGTTCATTACAGACAGCTTAGATTAGGCTATGATTACCTGAAGAATACACTAAAGCTCAAGTTTCCTAACATACAAGCTAATGTGGAGAGGATTCGGCAAGAGAGAAGGGAGAGGGAGATGAGGTCGAAAGAGATTTTGTTGAACAAGTATGAATCTTTGAAAGAGAAATTTTCTTCAATAAAGGGAGAGATACTGTCTACGATGGAGGAGATTGATGGGTGTTTAGACATTTTGCATTCAAAACAGGAACTCGAGTCAGATGATATCTTAGACGATGAAGAGCTTGAGGACTTTCGCTCTTTGGAGCTGCAGCAGCTTCGTCGTGAAGCATTGAATGAAGGGGAGAAAGTTTATGAAAGCAGTGATAACAAGGTAGTTTTTGATGCATTGCGGGAGCTATACAAACTTCTGGTGACAAAGCACTTGGTTTCCATTCAAGAATGGGTTTCTGTTCTGGTAAGAGTTGAAGTAGCTGACAATAGATTCAGAGATTCTACTTTGAAGGAGTTCATTGATATCCAAAACCGTGTTAAATCAGTTAAAAAAAGATGTGAGGAGGCAGGTTGTTCTTTTCTAAACTCATCAAAACTTGACGGGGAAGAAGATTTTTGGGAGGAGGGGAATGTTGTATCCATTGAAACCCCATCTGGTGTGCCTGATAATAAAAACAAACATCCTGACGTGGCATCAACTTCCCAAAATATGAGTAGTGATAAACTTGGTTCATGTGCTAAAGAGTCTAAAAGCTCTAACACTGACAGCCTACTTCATGGGGGAAATCAATCAGAGTCAAACCCTCTGAGGAGTAAACTTTTGACCAAAGCTCCTGTGGTAAGATGGGGTTCTCACTTGGATACTTGGGGTTCAAACAAGGTTTTTATGGCCAACCAGCGGGGATTGGATCTTGAAAGTCATTGGGGTAGGGTAGATGATGATGCAGTTATTCCATCAGATATAATTTCTGAATTGAGTGTTCCGGCAATGCCTTATGAAGAAAAGCAAATTGAGATCCAACCATGCCGTGCTCCTTTGAGAAAAGGGGGACTCTGTCGGAGAAGAGATATGAAAATTTGTCCATTTCATGGACCTATTATTCCTCGAGATGATGAAGGGAAGCTGCTTAGTGCAAGTCCTTCAGAAGACATGAATGTTAACATAACAAAGACTGATTTAGCTGAGAAGTTAGCAAAACAAGCAGTAAAGAATGTTCGTGAAACAGACAAGAAGGTGGCCAAGAAAAGAGAAATTGATAAACAGGAATTGAAACGTGCAAAACTTGCTAAAATTCGGGAACACAATGATGCAGTTTTACGGGATGCTGCATTGGCTTCAACTTCAAGATCAGCCGCTTTTGGAGAAGATGATGAGGTAACTAACAGAGACAAGAAAGCAAGTCTCGCGTCCATGCTGAAAAAGAAAGTAACGTCAAAAGATAGAATAGCTCAGAAGCTTTTGAGTTCACGGGCAAAGTAG

Protein sequence

>Msa1130530

MEEGEREEGNGKGAKVRFLIEKATNSTAPDVDHRLLKAIKTVVHYSNLELRLASQTLMDLMKRDHSQVRYLALQIIDELFMRSKLFRTLIVESLEQLMSLSVGFRRNLPLPAPPSVASLLRTKAIEFLEKWNVSFGVHYRQLRLGYDYLKNTLKLKFPNIQANVERIRQERREREMRSKEILLNKYESLKEKFSSIKGEILSTMEEIDGCLDILHSKQELESDDILDDEELEDFRSLELQQLRREALNEGEKVYESSDNKVVFDALRELYKLLVTKHLVSIQEWVSVLVRVEVADNRFRDSTLKEFIDIQNRVKSVKKRCEEAGCSFLNSSKLDGEEDFWEEGNVVSIETPSGVPDNKNKHPDVASTSQNMSSDKLGSCAKESKSSNTDSLLHGGNQSESNPLRSKLLTKAPVVRWGSHLDTWGSNKVFMANQRGLDLESHWGRVDDDAVIPSDIISELSVPAMPYEEKQIEIQPCRAPLRKGGLCRRRDMKICPFHGPIIPRDDEGKLLSASPSEDMNVNITKTDLAEKLAKQAVKNVRETDKKVAKKREIDKQELKRAKLAKIREHNDAVLRDAALASTSRSAAFGEDDEVTNRDKKASLASMLKKKVTSKDRIAQKLLSSRAK*