AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1397950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1397950 MtrunA17_Chr8g0364251 85.595 597 20 6 1 534 1 594 0.0 977
Msa1397950 MtrunA17_Chr6g0466611 27.700 426 241 14 85 492 142 518 7.55e-35 139
Msa1397950 MtrunA17_Chr6g0449741 28.293 410 235 13 85 479 249 614 9.49e-32 129
Msa1397950 MtrunA17_Chr4g0076491 28.398 412 234 14 85 479 287 654 1.48e-29 123
Msa1397950 MtrunA17_Chr1g0176041 25.527 474 256 18 60 494 121 536 3.56e-29 121
Msa1397950 MtrunA17_Chr3g0145781 26.852 432 237 16 66 470 119 498 1.95e-28 119
Msa1397950 MtrunA17_Chr7g0236831 26.464 461 282 17 85 503 163 608 2.58e-27 116
Msa1397950 MtrunA17_Chr3g0107851 27.500 400 225 13 107 492 139 487 5.29e-26 112
Msa1397950 MtrunA17_Chr3g0121351 25.328 458 250 17 85 509 145 543 5.12e-24 106
Msa1397950 MtrunA17_Chr2g0310581 25.272 459 283 15 34 489 10 411 8.77e-24 104
Msa1397950 MtrunA17_Chr2g0330401 25.610 410 220 16 107 494 118 464 2.84e-23 103
Msa1397950 MtrunA17_Chr8g0354761 25.067 375 219 13 108 472 31 353 1.99e-22 100
Msa1397950 MtrunA17_Chr4g0063551 25.899 417 213 16 107 489 162 516 2.78e-21 97.8
Msa1397950 MtrunA17_Chr2g0309551 25.546 458 261 16 85 499 109 529 6.59e-20 93.2
Msa1397950 MtrunA17_Chr4g0074521 25.000 400 248 11 84 467 78 441 5.53e-19 89.7
Msa1397950 MtrunA17_Chr1g0192021 31.217 189 111 3 81 259 22 201 6.62e-15 77.8
Msa1397950 MtrunA17_Chr2g0307471 26.630 184 111 4 85 258 91 260 1.64e-14 76.3
Msa1397950 MtrunA17_Chr2g0307471 38.710 93 54 2 379 468 339 431 2.06e-13 72.8
Msa1397950 MtrunA17_Chr2g0300291 34.532 139 87 3 359 493 368 506 3.43e-14 75.5
Msa1397950 MtrunA17_Chr2g0300291 28.421 190 119 6 78 258 128 309 2.19e-11 66.6
Msa1397950 MtrunA17_Chr3g0098121 36.134 119 72 3 379 493 398 516 1.17e-13 73.9
Msa1397950 MtrunA17_Chr3g0098121 30.890 191 106 9 77 258 146 319 8.37e-12 68.2
Msa1397950 MtrunA17_Chr6g0483491 38.182 110 61 3 380 484 253 360 1.58e-13 72.8
Msa1397950 MtrunA17_Chr6g0483491 29.609 179 101 5 85 254 10 172 3.82e-12 68.6
Msa1397950 MtrunA17_Chr7g0236841 38.182 110 61 3 380 484 253 360 1.74e-13 72.8
Msa1397950 MtrunA17_Chr7g0236841 29.609 179 101 5 85 254 10 172 1.86e-12 69.3
Msa1397950 MtrunA17_Chr2g0301281 26.961 204 128 5 83 276 39 231 2.53e-13 72.8
Msa1397950 MtrunA17_Chr2g0301281 40.260 77 45 1 397 472 380 456 3.15e-11 65.9
Msa1397950 MtrunA17_Chr4g0029191 27.419 186 114 5 83 258 42 216 5.63e-13 71.6
Msa1397950 MtrunA17_Chr4g0029191 28.082 146 91 2 341 472 314 459 1.09e-11 67.4
Msa1397950 MtrunA17_Chr7g0247191 33.846 130 75 4 377 500 386 510 6.14e-13 71.2
Msa1397950 MtrunA17_Chr7g0247221 33.846 130 75 4 377 500 379 503 6.26e-13 71.2
Msa1397950 MtrunA17_Chr7g0247181 33.846 130 75 4 377 500 376 500 6.56e-13 71.2
Msa1397950 MtrunA17_Chr7g0271121 36.522 115 71 2 379 491 354 468 1.61e-12 70.1
Msa1397950 MtrunA17_Chr6g0449911 33.140 172 107 5 84 254 164 328 2.07e-12 69.7
Msa1397950 MtrunA17_Chr5g0409981 35.514 107 64 2 394 495 371 477 5.09e-12 68.2
Msa1397950 MtrunA17_Chr4g0062301 34.586 133 81 5 379 507 346 476 8.24e-12 67.8
Msa1397950 MtrunA17_Chr4g0062301 27.811 169 109 5 96 259 108 268 9.23e-11 64.3
Msa1397950 MtrunA17_Chr1g0193491 35.385 130 77 4 373 500 360 484 1.12e-11 67.4
Msa1397950 MtrunA17_Chr4g0039471 27.568 185 113 5 81 258 219 389 3.87e-11 65.1
Msa1397950 MtrunA17_Chr3g0095031 37.634 93 57 1 400 491 358 450 6.69e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1397950 AT1G59990.1 50.345 580 211 12 1 517 1 566 3.08e-178 514
Msa1397950 AT1G59990.2 50.172 580 212 12 1 517 1 566 6.75e-178 513
Msa1397950 AT4G09730.1 26.887 424 247 15 85 492 113 489 3.90e-32 131
Msa1397950 AT5G60990.1 26.747 415 235 13 85 484 10 370 7.77e-29 119
Msa1397950 AT2G40700.1 26.211 454 255 15 73 472 21 448 2.96e-27 116
Msa1397950 AT2G33730.1 27.650 434 253 14 70 485 297 687 1.70e-26 114
Msa1397950 AT3G18600.1 26.884 398 222 13 83 468 88 428 5.00e-24 106
Msa1397950 AT2G42520.2 25.173 433 229 17 85 485 160 529 9.78e-23 102
Msa1397950 AT2G42520.1 25.173 433 229 17 85 485 160 529 9.78e-23 102
Msa1397950 AT2G42520.3 25.173 433 229 17 85 485 160 529 9.78e-23 102
Msa1397950 AT1G16280.1 26.526 426 245 16 85 500 59 426 2.77e-22 100
Msa1397950 AT3G22330.1 24.256 437 259 16 68 491 88 465 1.43e-21 99.0
Msa1397950 AT5G14610.5 25.542 415 231 13 84 482 169 521 4.51e-21 97.4
Msa1397950 AT5G14610.2 25.542 415 231 13 84 482 161 513 6.76e-21 97.1
Msa1397950 AT5G14610.6 25.542 415 231 13 84 482 161 513 7.44e-21 96.7
Msa1397950 AT3G58570.1 23.953 430 232 16 85 482 147 513 1.14e-20 96.3
Msa1397950 AT3G58510.1 24.711 433 229 16 85 485 152 519 2.78e-20 95.1
Msa1397950 AT3G58510.3 24.711 433 229 16 85 485 152 519 2.78e-20 95.1
Msa1397950 AT3G58510.2 24.711 433 229 16 85 485 152 519 2.78e-20 95.1
Msa1397950 AT1G12770.2 23.973 438 290 15 85 498 111 529 5.60e-20 94.0
Msa1397950 AT1G12770.1 23.973 438 290 15 85 498 111 529 5.60e-20 94.0
Msa1397950 AT5G08610.1 25.641 390 230 14 97 472 395 738 2.45e-19 92.4
Msa1397950 AT3G16840.2 24.356 427 259 16 85 468 192 597 3.27e-19 92.0
Msa1397950 AT3G16840.1 24.590 427 258 17 85 468 191 596 3.70e-19 91.7
Msa1397950 AT4G34910.1 34.239 184 105 4 85 259 47 223 2.68e-18 89.0
Msa1397950 AT5G05450.1 25.253 396 220 15 100 472 34 376 1.40e-17 86.7
Msa1397950 AT5G63120.2 32.836 134 83 3 379 505 412 545 7.37e-15 77.8
Msa1397950 AT1G31970.1 36.667 150 78 6 378 518 367 508 2.10e-14 76.3
Msa1397950 AT1G55150.1 31.169 154 89 5 355 494 318 468 5.68e-14 74.7
Msa1397950 AT1G55150.2 31.169 154 89 5 355 494 343 493 7.02e-14 74.7
Msa1397950 AT4G00660.1 34.615 130 74 4 377 500 368 492 5.88e-13 71.6
Msa1397950 AT4G00660.2 34.615 130 74 4 377 500 368 492 5.88e-13 71.6
Msa1397950 AT2G45810.1 35.398 113 64 3 377 483 391 500 1.04e-12 70.9
Msa1397950 AT4G16630.1 29.000 200 109 8 70 253 148 330 1.47e-12 70.9
Msa1397950 AT4G16630.1 34.783 115 70 3 379 489 414 527 4.12e-12 69.3
Msa1397950 AT5G65900.1 31.008 129 82 4 376 500 399 524 2.75e-12 69.7
Msa1397950 AT3G61240.2 34.513 113 65 3 377 483 361 470 4.30e-12 68.9
Msa1397950 AT3G61240.1 34.513 113 65 3 377 483 361 470 4.30e-12 68.9
Msa1397950 AT5G08620.1 28.774 212 125 8 58 258 61 257 5.79e-12 68.6
Msa1397950 AT5G14610.4 23.958 384 214 13 84 451 169 490 2.08e-11 66.6
Msa1397950 AT5G26742.1 36.522 115 71 2 379 491 353 467 3.05e-11 66.6
Msa1397950 AT5G26742.2 36.522 115 71 2 379 491 353 467 3.06e-11 66.6
Msa1397950 AT3G06480.1 44.872 78 42 1 406 482 710 787 4.04e-11 66.6
Msa1397950 AT3G22310.2 32.174 115 76 2 379 491 363 477 5.00e-11 65.9
Msa1397950 AT3G22310.1 32.174 115 76 2 379 491 363 477 5.09e-11 65.9
Msa1397950 AT5G26742.3 36.522 115 71 2 379 491 260 374 5.34e-11 65.9

Find 158 sgRNAs with CRISPR-Local

Find 670 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCAGTCTCAGTAATTTA+AGG 0.067787 tig0022216:-72589 None:intergenic
TGACCCTTGCCTTTGAATAC+TGG 0.196947 tig0022216:+72367 Msa1397950:three_prime_UTR
CAGTGGCTTTCTTCTTAAAT+TGG 0.213499 tig0022216:-71975 None:intergenic
TTCAGCTTCGTTATTAATAT+TGG 0.230748 tig0022216:-65491 None:intergenic
TTTATTATATATTCACCTTA+TGG 0.255618 tig0022216:-72271 None:intergenic
AAATCGGAAGATTTGGATAA+TGG 0.257182 tig0022216:+69175 Msa1397950:CDS
ATTTGTATGGAGTTGTATCC+TGG 0.295369 tig0022216:-72653 None:intergenic
TCAGGCGGATTACTTTATTC+TGG 0.310873 tig0022216:-65297 None:intergenic
GTGAAGATATTGGGCTATGC+TGG 0.320318 tig0022216:+69256 Msa1397950:intron
CACTTCCTGTTGACAATACT+TGG 0.322662 tig0022216:+72453 Msa1397950:three_prime_UTR
CAGTTTAAAATCGGAAGATT+TGG 0.325357 tig0022216:+69168 Msa1397950:CDS
AAATGTCTCTCATGTTATTC+AGG 0.337663 tig0022216:+69405 Msa1397950:CDS
TGGACCAGGGATGGCCAATT+CGG 0.344742 tig0022216:+65025 Msa1397950:intron
AATAATTGATGGTAGCAAAT+AGG 0.357540 tig0022216:-63629 None:intergenic
AGCTAGAGGGAACTTTAATT+AGG 0.370534 tig0022216:-72125 None:intergenic
TATATAGGTGTCTTTGGAAC+CGG 0.375551 tig0022216:-72993 None:intergenic
GTCTTTGGAACCGGGCTATT+AGG 0.379584 tig0022216:-72984 None:intergenic
CAATACACCCTCTCTCGTTC+AGG 0.382589 tig0022216:+63922 Msa1397950:CDS
ATGATATCAGGTTCCCGAAT+TGG 0.387726 tig0022216:-65039 None:intergenic
CACAAGTGAAAGAGCTCATA+AGG 0.389324 tig0022216:+69134 Msa1397950:CDS
TTGAAGTAAAACTCATACTT+TGG 0.390300 tig0022216:+72009 Msa1397950:three_prime_UTR
GTAGATGCTGTTCGTCGTGC+AGG 0.390681 tig0022216:+71119 Msa1397950:CDS
TAGACATAAATTTCACCTCT+TGG 0.392192 tig0022216:+72309 Msa1397950:three_prime_UTR
GGACCAGGGATGGCCAATTC+GGG 0.395111 tig0022216:+65026 Msa1397950:intron
GAGAGAAGAAGAATAATTGA+TGG 0.397060 tig0022216:-63640 None:intergenic
CCTGATGCTGAGTGGGTTAG+TGG 0.398187 tig0022216:+65649 Msa1397950:CDS
CACTACCTGTTTCCCACAAA+TGG 0.406579 tig0022216:-64850 None:intergenic
TGCAGCCATTTGTGGGAAAC+AGG 0.410751 tig0022216:+64845 Msa1397950:CDS
GACCCTTGCCTTTGAATACT+GGG 0.411462 tig0022216:+72368 Msa1397950:three_prime_UTR
TGCTGGTAACTAGTCCGATT+TGG 0.414486 tig0022216:-71070 None:intergenic
CAGCAGACACAACCCTTTGT+TGG 0.417019 tig0022216:+63779 Msa1397950:intron
AAGCACGAGCAGAACTTTCC+TGG 0.423259 tig0022216:-64739 None:intergenic
TTCACCTCTTGGATGACATC+AGG 0.428040 tig0022216:+72320 Msa1397950:three_prime_UTR
TTAGTTGATTTCTACGACAA+AGG 0.431692 tig0022216:+69334 Msa1397950:CDS
TCTATACCATCTGTGTTGTC+AGG 0.435526 tig0022216:+64582 Msa1397950:CDS
TTTCCAGATTGAAGCAAAGA+TGG 0.439295 tig0022216:+69092 Msa1397950:intron
TGAATAACATGAGAGACATT+TGG 0.442425 tig0022216:-69403 None:intergenic
TCGTCTGACATGGCTTCAAT+TGG 0.443242 tig0022216:-65442 None:intergenic
AGAGGGTTCATTTCACCTAC+TGG 0.444022 tig0022216:-72217 None:intergenic
GTTCGTCGTGCAGGGGAACT+CGG 0.444099 tig0022216:+71128 Msa1397950:CDS
CTGGGTTTGCTTTATATCGT+GGG 0.446385 tig0022216:-72634 None:intergenic
TACAAGCTCTCTGTTGGATT+CGG 0.447095 tig0022216:-71099 None:intergenic
CCACTAACCCACTCAGCATC+AGG 0.455201 tig0022216:-65649 None:intergenic
TGTGAATCACAGTTTAAAAT+CGG 0.456195 tig0022216:+69159 Msa1397950:CDS
ATTGAAATCTTCTGATGAAA+CGG 0.462725 tig0022216:-63807 None:intergenic
TGCAGGAGACCGCATTTAGC+AGG 0.463069 tig0022216:+71394 Msa1397950:intron
ATCGACCAAGTATTGTCAAC+AGG 0.464489 tig0022216:-72458 None:intergenic
CGCTGTAAGACTCTCTTCAA+TGG 0.464885 tig0022216:-71942 None:intergenic
TTTACAAAACATCAGTAACT+TGG 0.467784 tig0022216:-72151 None:intergenic
AGTCCTTAAATTACTGAGAC+TGG 0.468283 tig0022216:+72586 Msa1397950:three_prime_UTR
GTTAGTGCTGCAGCCATTTG+TGG 0.471920 tig0022216:+64837 Msa1397950:CDS
TTGCTGAGGATAACGTTTCG+TGG 0.472795 tig0022216:+63846 Msa1397950:CDS
CAAGTATTGTCAACAGGAAG+TGG 0.474712 tig0022216:-72452 None:intergenic
CCTGGGTTTGCTTTATATCG+TGG 0.478444 tig0022216:-72635 None:intergenic
AACGTTTCGTGGAGTTCACT+TGG 0.481595 tig0022216:+63857 Msa1397950:CDS
GAAGCTGTGGTGAAGATATT+GGG 0.484895 tig0022216:+69247 Msa1397950:intron
ACAGCTAGAGCTGGCCAAAT+CGG 0.486615 tig0022216:+71056 Msa1397950:CDS
GTTTCATCAGAAGATTTCAA+TGG 0.487226 tig0022216:+63809 Msa1397950:CDS
AGAAATGACCTGAACGAGAG+AGG 0.490122 tig0022216:-63930 None:intergenic
AGCATCTACAAGCTCTCTGT+TGG 0.491017 tig0022216:-71105 None:intergenic
GGTCCTCTATTCTTCTTGAA+AGG 0.491894 tig0022216:-72425 None:intergenic
AATTGTGTGAGCAGGTAGTT+AGG 0.493726 tig0022216:+64775 Msa1397950:intron
TATTAGAGAGAGCTCGAGAA+AGG 0.494225 tig0022216:-63892 None:intergenic
GAATTGCACGTTGGATGAGC+GGG 0.497408 tig0022216:+69303 Msa1397950:CDS
TAGATGCTGTTCGTCGTGCA+GGG 0.499759 tig0022216:+71120 Msa1397950:CDS
AATCCTTTCAAGAAGAATAG+AGG 0.499760 tig0022216:+72422 Msa1397950:three_prime_UTR
GGGTACAGAGGAATATTCTC+TGG 0.503712 tig0022216:+64683 Msa1397950:CDS
GGTGTTGTCACAATGATATC+AGG 0.504804 tig0022216:-65051 None:intergenic
GCAGCTACACTTCCGGTGAA+TGG 0.505831 tig0022216:+65589 Msa1397950:intron
TTTGTATGGAGTTGTATCCT+GGG 0.514071 tig0022216:-72652 None:intergenic
TGAAGATATTGGGCTATGCT+GGG 0.514289 tig0022216:+69257 Msa1397950:intron
CGTTGATAGAAGACGCCGCA+TGG 0.515325 tig0022216:+65098 Msa1397950:CDS
GTAGTTATTGCTGCAGAGAC+CGG 0.517794 tig0022216:+64612 Msa1397950:CDS
TCAAGAAAACAAGAAGAGAC+TGG 0.518017 tig0022216:+65518 Msa1397950:CDS
CTCAGTAATTTAAGGACTGA+TGG 0.522062 tig0022216:-72581 None:intergenic
AAGAAGTCTCTCCGCCGGCC+AGG 0.524452 tig0022216:+64721 Msa1397950:CDS
TTCCTCTCATTGATAAGCTG+AGG 0.530497 tig0022216:+64661 Msa1397950:CDS
TATGCATGGTGTTAAATATG+TGG 0.531983 tig0022216:+65125 Msa1397950:CDS
TTTAAATTTCTAAAACCAGT+AGG 0.532466 tig0022216:+72202 Msa1397950:three_prime_UTR
CAGTAACTTGGGACAGCTAG+AGG 0.533390 tig0022216:-72139 None:intergenic
AAGAAAGCCGCCTAATAGCC+CGG 0.534939 tig0022216:+72974 Msa1397950:three_prime_UTR
ATCTTCATTGTCACAATCCA+AGG 0.537346 tig0022216:+65677 Msa1397950:CDS
TCCTCTCATTGATAAGCTGA+GGG 0.540186 tig0022216:+64662 Msa1397950:CDS
GTGAATGGAAAGAAAACAGC+GGG 0.540547 tig0022216:+65604 Msa1397950:CDS
GTTGGATTCGGTATACATGC+TGG 0.545852 tig0022216:-71087 None:intergenic
ATGTCAGACGAGGAGGATGA+TGG 0.547971 tig0022216:+65454 Msa1397950:CDS
TTACAAAACATCAGTAACTT+GGG 0.548520 tig0022216:-72150 None:intergenic
ATGCTATTTCTGCAGGAGGA+TGG 0.549852 tig0022216:-72679 None:intergenic
AGGAGGATGGATCATTTGTA+TGG 0.550338 tig0022216:-72666 None:intergenic
TGATGCAGCTGCTCGTGGCG+TGG 0.557135 tig0022216:+69375 Msa1397950:CDS
ACATGATTGAGAAGAGCAGC+AGG 0.557430 tig0022216:-65072 None:intergenic
ACCATCTGTGTTGTCAGGAA+AGG 0.557627 tig0022216:+64587 Msa1397950:CDS
TTCAACAGCCTCAACTGTGT+TGG 0.557717 tig0022216:-69227 None:intergenic
GAAATGACCTGAACGAGAGA+GGG 0.559297 tig0022216:-63929 None:intergenic
TTAGTGCTGCAGCCATTTGT+GGG 0.562083 tig0022216:+64838 Msa1397950:CDS
CTCACCTCAGTGAGATGTAG+TGG 0.563394 tig0022216:-72179 None:intergenic
GAAAGCTAATGTCTATCAAG+AGG 0.563963 tig0022216:-72235 None:intergenic
ACAAGTGAAAGAGCTCATAA+GGG 0.567146 tig0022216:+69135 Msa1397950:CDS
ATTAGAGAGAGCTCGAGAAA+GGG 0.568016 tig0022216:-63891 None:intergenic
CGGTGGAAGGATCTGAGTAA+TGG 0.569099 tig0022216:-72554 None:intergenic
GACTGATGGTATGCGGTGGA+AGG 0.570723 tig0022216:-72567 None:intergenic
ATCATCCTCCTCGTCTGACA+TGG 0.571316 tig0022216:-65452 None:intergenic
ATTGCTGCAGAGACCGGCAG+TGG 0.572069 tig0022216:+64618 Msa1397950:CDS
GAAACGGCGCTTCCAACAAA+GGG 0.573494 tig0022216:-63791 None:intergenic
AAAAGACACTTTCTTTGCTG+AGG 0.574216 tig0022216:+63832 Msa1397950:CDS
TGAAACGGCGCTTCCAACAA+AGG 0.574443 tig0022216:-63792 None:intergenic
ACTGTATGTCTTACCACTGC+CGG 0.574756 tig0022216:-64631 None:intergenic
AAGCCCAGTATTCAAAGGCA+AGG 0.577421 tig0022216:-72371 None:intergenic
ACGAGCAGAACTTTCCTGGC+CGG 0.577551 tig0022216:-64735 None:intergenic
CAATTTAAGAAGAAAGCCAC+TGG 0.578211 tig0022216:+71976 Msa1397950:three_prime_UTR
GAAGATTTGGATAATGGTGG+TGG 0.580546 tig0022216:+69181 Msa1397950:CDS
ATATAGGTGTCTTTGGAACC+GGG 0.582674 tig0022216:-72992 None:intergenic
TTGTCAACAGGAAGTGGGAA+AGG 0.584808 tig0022216:-72446 None:intergenic
GTGTGAGCAGGTAGTTAGGA+TGG 0.586604 tig0022216:+64779 Msa1397950:intron
CGCCGCATGGAATTTATGCA+TGG 0.588650 tig0022216:+65111 Msa1397950:CDS
AAAGCTAATGTCTATCAAGA+GGG 0.594030 tig0022216:-72234 None:intergenic
TGATAAAGAAGTCTCTCCGC+CGG 0.597198 tig0022216:+64716 Msa1397950:CDS
TCCTTTCCTGACAACACAGA+TGG 0.603340 tig0022216:-64588 None:intergenic
CCCCTCAGCTTATCAATGAG+AGG 0.603553 tig0022216:-64663 None:intergenic
CATGTTTCCTGATGCTGAGT+GGG 0.603761 tig0022216:+65642 Msa1397950:CDS
AGCCCAGTATTCAAAGGCAA+GGG 0.604903 tig0022216:-72370 None:intergenic
TCGGAAGATTTGGATAATGG+TGG 0.610027 tig0022216:+69178 Msa1397950:CDS
TGTACTGATGCAGCTGCTCG+TGG 0.611822 tig0022216:+69370 Msa1397950:CDS
AGCAGAACTTTCCTGGCCGG+CGG 0.612673 tig0022216:-64732 None:intergenic
TGAAGCCATGTCAGACGAGG+AGG 0.613709 tig0022216:+65447 Msa1397950:CDS
ATTGGTCGTACAGCTAGAGC+TGG 0.616027 tig0022216:+71047 Msa1397950:CDS
AGAATTGCACGTTGGATGAG+CGG 0.619703 tig0022216:+69302 Msa1397950:CDS
AGGATGGCTAATAGTCTTCG+TGG 0.620179 tig0022216:+64795 Msa1397950:CDS
AAGCTGATATGCTCCTCTGT+GGG 0.624872 tig0022216:+65269 Msa1397950:CDS
TGATGCTTCAGAAGGTGAAG+AGG 0.626535 tig0022216:+65414 Msa1397950:intron
AATGGCTGCAGCACTAACAA+TGG 0.628494 tig0022216:-64832 None:intergenic
TGATAAGCTGAGGGGTACAG+AGG 0.632914 tig0022216:+64671 Msa1397950:CDS
GTTGATTTCTACGACAAAGG+TGG 0.637199 tig0022216:+69337 Msa1397950:CDS
TTTGGAACCGGGCTATTAGG+CGG 0.639130 tig0022216:-72981 None:intergenic
AGTAACTTGGGACAGCTAGA+GGG 0.642530 tig0022216:-72138 None:intergenic
CTTCAATAGAGCAACTCCAG+TGG 0.645202 tig0022216:-71992 None:intergenic
CGAGGAGGATGATGGTAACG+AGG 0.645225 tig0022216:+65462 Msa1397950:CDS
AGATGCTGTTCGTCGTGCAG+GGG 0.648856 tig0022216:+71121 Msa1397950:CDS
AAGTATTGTCAACAGGAAGT+GGG 0.649121 tig0022216:-72451 None:intergenic
CCTTAAATTACTGAGACTGG+AGG 0.651395 tig0022216:+72589 Msa1397950:three_prime_UTR
AATTGAAGCCATGTCAGACG+AGG 0.652612 tig0022216:+65444 Msa1397950:CDS
AGGGGAACTCGGTCTACCTG+TGG 0.664526 tig0022216:+71139 Msa1397950:CDS
GAAGAGACTGGAGAAGAGTG+AGG 0.668144 tig0022216:+65530 Msa1397950:CDS
GAAGCTGATATGCTCCTCTG+TGG 0.669619 tig0022216:+65268 Msa1397950:CDS
AGTTGAGGCTGTTGAAGCTG+TGG 0.675682 tig0022216:+69234 Msa1397950:CDS
TAAGGACTGATGGTATGCGG+TGG 0.676183 tig0022216:-72571 None:intergenic
TTATCATAAGAATTGCACGT+TGG 0.677936 tig0022216:+69294 Msa1397950:CDS
TATTCTGGAAGCTCCCACAG+AGG 0.680409 tig0022216:-65282 None:intergenic
GAAACCTGATGTCATCCAAG+AGG 0.695502 tig0022216:-72324 None:intergenic
ACATGTTTCCTGATGCTGAG+TGG 0.696080 tig0022216:+65641 Msa1397950:CDS
ATTTAAGGACTGATGGTATG+CGG 0.696542 tig0022216:-72574 None:intergenic
CCACGATATAAAGCAAACCC+AGG 0.698006 tig0022216:+72635 Msa1397950:three_prime_UTR
CACCATGCATAAATTCCATG+CGG 0.706774 tig0022216:-65113 None:intergenic
GGTGTTTGCCAACACAGTTG+AGG 0.709075 tig0022216:+69219 Msa1397950:CDS
CCTCTCATTGATAAGCTGAG+GGG 0.726942 tig0022216:+64663 Msa1397950:CDS
TGGTGGCATTCATAGAACAA+TGG 0.741830 tig0022216:+69198 Msa1397950:CDS
CACACCACTACATCTCACTG+AGG 0.766057 tig0022216:+72175 Msa1397950:three_prime_UTR
GGTGAATGGAAAGAAAACAG+CGG 0.768400 tig0022216:+65603 Msa1397950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTAACTAATTGAAAA+TGG + tig0022216:64102-64121 Msa1397950:intron 10.0%
!! TTTATTAACTAATTGAAAAT+GGG + tig0022216:64103-64122 Msa1397950:intron 10.0%
!!! TATATTTTCTAATTTCTAAT+TGG + tig0022216:65233-65252 Msa1397950:intron 10.0%
!! TTCTATAATATAAATAACAA+AGG - tig0022216:68443-68462 None:intergenic 10.0%
!!! AAGTTCATAATATTTTTTTA+TGG + tig0022216:68529-68548 Msa1397950:intron 10.0%
!!! TAAATTTTGTAATTAATCAA+CGG - tig0022216:70607-70626 None:intergenic 10.0%
!!! TTTTATTTTTATATAACCTT+AGG + tig0022216:70930-70949 Msa1397950:intron 10.0%
!! AATTATAAAACTGTATTTAT+TGG + tig0022216:71164-71183 Msa1397950:intron 10.0%
!! ATAAAAAAAAGTTAATACAT+TGG + tig0022216:71239-71258 Msa1397950:intron 10.0%
!! TAAAAAAAAGTTAATACATT+GGG + tig0022216:71240-71259 Msa1397950:intron 10.0%
!!! TTTTTTTTTTATTTTTACCT+TGG + tig0022216:71681-71700 Msa1397950:intron 10.0%
!! ATTTATAGTTATGAAATTTG+TGG + tig0022216:64930-64949 Msa1397950:intron 15.0%
!! TAGAAAATATAAACATAACT+AGG - tig0022216:65224-65243 None:intergenic 15.0%
!! AAATTGTATTGTATGAATAT+CGG + tig0022216:67331-67350 Msa1397950:intron 15.0%
!!! TTTTTTTGTCCAAAATAAAA+AGG - tig0022216:67698-67717 None:intergenic 15.0%
!! ATTATGAAAAAAATACCAAA+TGG + tig0022216:67976-67995 Msa1397950:intron 15.0%
!! TCATATTCAAATGAATTATT+GGG - tig0022216:68104-68123 None:intergenic 15.0%
!! TTCATATTCAAATGAATTAT+TGG - tig0022216:68105-68124 None:intergenic 15.0%
!! AATTTCTTTCATCAATTTAT+CGG - tig0022216:68413-68432 None:intergenic 15.0%
!! TAATTAAACTTATAGGAATT+AGG + tig0022216:69778-69797 Msa1397950:intron 15.0%
!!! ACATTTTGACATAAATAAAT+CGG - tig0022216:70202-70221 None:intergenic 15.0%
!! ATGTAATATACATTATTTCA+TGG + tig0022216:70742-70761 Msa1397950:intron 15.0%
!! ATAATAAAATATAACACCTA+AGG - tig0022216:70949-70968 None:intergenic 15.0%
!! TTTATTATATATTCACCTTA+TGG - tig0022216:72274-72293 None:intergenic 15.0%
!! TTAAAATCATATTAACAACT+TGG + tig0022216:72886-72905 Msa1397950:intron 15.0%
!! AATAAAAACAGAAATATAGC+AGG - tig0022216:64037-64056 None:intergenic 20.0%
!!! AATCAAATTTTGAACATACA+GGG - tig0022216:64082-64101 None:intergenic 20.0%
!!! AAATCAAATTTTGAACATAC+AGG - tig0022216:64083-64102 None:intergenic 20.0%
!! TAAGGTTAGATTATATAACT+TGG + tig0022216:64420-64439 Msa1397950:intron 20.0%
!!! TTTGTTTTCATTCTTCTATT+CGG + tig0022216:64479-64498 Msa1397950:intron 20.0%
!! ACTGATAATAAGTACAAAAA+GGG - tig0022216:65716-65735 None:intergenic 20.0%
!! TACTGATAATAAGTACAAAA+AGG - tig0022216:65717-65736 None:intergenic 20.0%
!!! ATTCAATTTTATTTGCTACT+TGG + tig0022216:65741-65760 Msa1397950:intron 20.0%
!!! CTTTAAAAAATAAAACACGT+GGG + tig0022216:66565-66584 Msa1397950:intron 20.0%
!! TTTAAAAAATAAAACACGTG+GGG + tig0022216:66566-66585 Msa1397950:intron 20.0%
!!! AATAGTTTGAAGTATCTAAA+AGG + tig0022216:67193-67212 Msa1397950:intron 20.0%
!! AATTTCTTGTGAGTTATTAT+AGG + tig0022216:67364-67383 Msa1397950:intron 20.0%
!!! TTATGTATTGCATTTTCTTA+TGG - tig0022216:67416-67435 None:intergenic 20.0%
!! GATAAAAAAATTGCTTTAAC+AGG - tig0022216:67759-67778 None:intergenic 20.0%
!!! ACAATAATTTTTTGAGAGAA+GGG - tig0022216:67801-67820 None:intergenic 20.0%
!!! AACAATAATTTTTTGAGAGA+AGG - tig0022216:67802-67821 None:intergenic 20.0%
!! TAACTTGAAATGTAGAAAAA+GGG - tig0022216:67853-67872 None:intergenic 20.0%
!! ATAACTTGAAATGTAGAAAA+AGG - tig0022216:67854-67873 None:intergenic 20.0%
!!! TTTTTCATAATAGATCCAAA+AGG - tig0022216:67967-67986 None:intergenic 20.0%
!! TTCAAATGAATTTATCCATT+TGG - tig0022216:67994-68013 None:intergenic 20.0%
!! TTTAAATCACAAATACCAAA+AGG + tig0022216:68130-68149 Msa1397950:intron 20.0%
!! ATGAAGTTGAAATTATGTAT+GGG + tig0022216:68241-68260 Msa1397950:intron 20.0%
!! TACTATTGTATTAGTAAGTA+AGG + tig0022216:68353-68372 Msa1397950:intron 20.0%
!! ATAATATAAATAACAAAGGC+TGG - tig0022216:68439-68458 None:intergenic 20.0%
!!! GAAATTTTATTCATACTTGA+TGG + tig0022216:68469-68488 Msa1397950:intron 20.0%
!! AGAATAAAATAGAAAGAGTA+TGG - tig0022216:68813-68832 None:intergenic 20.0%
!!! TTTTCCTTATACATGTTATA+AGG + tig0022216:69433-69452 Msa1397950:intron 20.0%
!! TATACCTTATAACATGTATA+AGG - tig0022216:69440-69459 None:intergenic 20.0%
!!! CTTAAATTTTGAAAGTTCTA+GGG + tig0022216:69500-69519 Msa1397950:intron 20.0%
!!! TAGACAATTTTCTTTGTAAT+TGG + tig0022216:70036-70055 Msa1397950:intron 20.0%
!! ACAAAAGTAAAATTGTTTGT+TGG + tig0022216:70161-70180 Msa1397950:intron 20.0%
!! CAAAAGTAAAATTGTTTGTT+GGG + tig0022216:70162-70181 Msa1397950:intron 20.0%
!! ATATTACATAACATGATTTG+AGG - tig0022216:70731-70750 None:intergenic 20.0%
!!! ATATTAATGACTTGTATAGT+TGG - tig0022216:71332-71351 None:intergenic 20.0%
!!! CTTTCTTTTTTATCTTGTTA+CGG - tig0022216:71431-71450 None:intergenic 20.0%
!!! TTTTGATTTTTAAAGCTCTA+TGG - tig0022216:71474-71493 None:intergenic 20.0%
!!! TATTGATTTTTAAAGCTCTA+TGG - tig0022216:71525-71544 None:intergenic 20.0%
!!! TTTTTTTATTTTTACCTTGG+AGG + tig0022216:71684-71703 Msa1397950:intron 20.0%
!!! GATTAGTTTTCATATTACTT+AGG + tig0022216:71715-71734 Msa1397950:intron 20.0%
!!! TTTAAATTTCTAAAACCAGT+AGG + tig0022216:72202-72221 Msa1397950:three_prime_UTR 20.0%
!!! ATTTTTGAAGTAATTTCATG+TGG + tig0022216:72736-72755 Msa1397950:intron 20.0%
!! TCATTTCACAAAACATTAAA+AGG - tig0022216:72801-72820 None:intergenic 20.0%
!!! AATATGATTTTAACTATGAC+CGG - tig0022216:72879-72898 None:intergenic 20.0%
!! ATGTTTCTTGAACAAAAAAT+TGG + tig0022216:72949-72968 Msa1397950:three_prime_UTR 20.0%
!!! AAATAGGTGAATTTTGAAGA+TGG - tig0022216:63616-63635 None:intergenic 25.0%
!! AATAATTGATGGTAGCAAAT+AGG - tig0022216:63632-63651 None:intergenic 25.0%
! ATTGAAATCTTCTGATGAAA+CGG - tig0022216:63810-63829 None:intergenic 25.0%
!!! TGATTTATTAGCTTTAGTCA+AGG + tig0022216:64132-64151 Msa1397950:intron 25.0%
!!! CTCGGACTTTTTTTTTTTAT+TGG + tig0022216:64203-64222 Msa1397950:intron 25.0%
!! TTGTTTTCATTCTTCTATTC+GGG + tig0022216:64480-64499 Msa1397950:intron 25.0%
!!! TCAGCACTAAAAATCTTTTT+TGG + tig0022216:65005-65024 Msa1397950:intron 25.0%
!!! TAAAAATCTTTTTTGGACCA+GGG + tig0022216:65012-65031 Msa1397950:intron 25.0%
!! TTTTCTAATTTCTAATTGGC+AGG + tig0022216:65237-65256 Msa1397950:intron 25.0%
! TTCAGCTTCGTTATTAATAT+TGG - tig0022216:65494-65513 None:intergenic 25.0%
! TGATAATAAGTACAAAAAGG+GGG - tig0022216:65714-65733 None:intergenic 25.0%
! CTGATAATAAGTACAAAAAG+GGG - tig0022216:65715-65734 None:intergenic 25.0%
! TAATTTACCAAGGTAAAAGA+TGG + tig0022216:65928-65947 Msa1397950:intron 25.0%
!! TGGGCAATAAATTTTAAACT+TGG - tig0022216:65972-65991 None:intergenic 25.0%
! TTCTTCAATTTAAGTAAACC+TGG - tig0022216:66060-66079 None:intergenic 25.0%
!!! TGATTGTTTTTCAGTTTGAA+TGG + tig0022216:66121-66140 Msa1397950:intron 25.0%
!!! GCTTTAAAAAATAAAACACG+TGG + tig0022216:66564-66583 Msa1397950:intron 25.0%
!! AAGTAAAAGTACAAGTACAA+AGG + tig0022216:66825-66844 Msa1397950:intron 25.0%
!! AGTAAAAGTACAAGTACAAA+GGG + tig0022216:66826-66845 Msa1397950:intron 25.0%
! TAGATAGTAACTCAATCATT+AGG - tig0022216:66959-66978 None:intergenic 25.0%
! ATTGAGTTACTATCTAATCT+AGG + tig0022216:66963-66982 Msa1397950:intron 25.0%
! TAGATAGTAACTCAATCATT+AGG - tig0022216:66959-66978 None:intergenic 25.0%
! ATTGAGTTACTATCTAATCT+AGG + tig0022216:66963-66982 Msa1397950:intron 25.0%
!!! ACACCTTCTAAAATTAACAT+GGG - tig0022216:67659-67678 None:intergenic 25.0%
!!! AACACCTTCTAAAATTAACA+TGG - tig0022216:67660-67679 None:intergenic 25.0%
!!! CATCATACACCTTTTTATTT+TGG + tig0022216:67686-67705 Msa1397950:intron 25.0%
!!! CAATAATTTTTTGAGAGAAG+GGG - tig0022216:67800-67819 None:intergenic 25.0%
! ACAGTGAAGATTAATTAAGT+GGG - tig0022216:67884-67903 None:intergenic 25.0%
! AACAGTGAAGATTAATTAAG+TGG - tig0022216:67885-67904 None:intergenic 25.0%
!! TGTTAGAAAATTCATCCTTT+TGG - tig0022216:68148-68167 None:intergenic 25.0%
! CATACATAATTTCAACTTCA+TGG - tig0022216:68242-68261 None:intergenic 25.0%
! CATGAAGTTGAAATTATGTA+TGG + tig0022216:68240-68259 Msa1397950:intron 25.0%
! TGAAGTTGAAATTATGTATG+GGG + tig0022216:68242-68261 Msa1397950:intron 25.0%
!! ACACACTAGTTTGATTTAAA+GGG - tig0022216:68321-68340 None:intergenic 25.0%
!! TACACACTAGTTTGATTTAA+AGG - tig0022216:68322-68341 None:intergenic 25.0%
! TATTGTATTAGTAAGTAAGG+TGG + tig0022216:68356-68375 Msa1397950:intron 25.0%
! AACTAATTGCATGCTAATAA+TGG - tig0022216:68702-68721 None:intergenic 25.0%
! TTCTTATACAAATACCACAT+AGG + tig0022216:68741-68760 Msa1397950:intron 25.0%
! AATAGTATGTTAGTAGTTGT+TGG - tig0022216:68862-68881 None:intergenic 25.0%
!! TGTGAATCACAGTTTAAAAT+CGG + tig0022216:69159-69178 Msa1397950:CDS 25.0%
!!! GCTTAAATTTTGAAAGTTCT+AGG + tig0022216:69499-69518 Msa1397950:intron 25.0%
!!! CATTTTGCAGTTTTATTTCT+GGG - tig0022216:69979-69998 None:intergenic 25.0%
! TCTATAAAAATGCACAAACT+CGG - tig0022216:70020-70039 None:intergenic 25.0%
! CAAATCCAAAGAAATGATTA+GGG - tig0022216:70256-70275 None:intergenic 25.0%
! ACAAATCCAAAGAAATGATT+AGG - tig0022216:70257-70276 None:intergenic 25.0%
!! GTTTATAATTAAGGGTACAA+TGG - tig0022216:70574-70593 None:intergenic 25.0%
! CGGATTGAGTTTATAATTAA+GGG - tig0022216:70582-70601 None:intergenic 25.0%
! CCTTAATTATAAACTCAATC+CGG + tig0022216:70580-70599 Msa1397950:intron 25.0%
!!! AAATTTAAAAAGCACTTGCA+AGG + tig0022216:70620-70639 Msa1397950:intron 25.0%
!!! ACAGTTTTATAATTTACCAC+AGG - tig0022216:71158-71177 None:intergenic 25.0%
! TTCAAATATCTCAATGTGTA+TGG - tig0022216:71211-71230 None:intergenic 25.0%
!! TTTGATAGATTCCAACATTT+TGG + tig0022216:71351-71370 Msa1397950:intron 25.0%
! CGTAACAAGATAAAAAAGAA+AGG + tig0022216:71429-71448 Msa1397950:CDS 25.0%
!! AGTCTTGTATCCTTATAAAT+AGG + tig0022216:71738-71757 Msa1397950:intron 25.0%
! GTCTTGTATCCTTATAAATA+GGG + tig0022216:71739-71758 Msa1397950:intron 25.0%
! TCTTGTATCCTTATAAATAG+GGG + tig0022216:71740-71759 Msa1397950:intron 25.0%
! AATAGAAACCCCTATTTATA+AGG - tig0022216:71751-71770 None:intergenic 25.0%
! TTGAAGTAAAACTCATACTT+TGG + tig0022216:72009-72028 Msa1397950:three_prime_UTR 25.0%
! AAAACTGATGTTCGAAAAAA+AGG + tig0022216:72052-72071 Msa1397950:three_prime_UTR 25.0%
! TTACAAAACATCAGTAACTT+GGG - tig0022216:72153-72172 None:intergenic 25.0%
! TTTACAAAACATCAGTAACT+TGG - tig0022216:72154-72173 None:intergenic 25.0%
!!! TCTTATTTTCGTAATCCATA+AGG + tig0022216:72256-72275 Msa1397950:three_prime_UTR 25.0%
!! TAATTATCATGTTTTCTGAG+TGG - tig0022216:72511-72530 None:intergenic 25.0%
! CAAAACATTAAAAGGAAAGA+AGG - tig0022216:72793-72812 None:intergenic 25.0%
!!! ATATGATTTTAACTATGACC+GGG - tig0022216:72878-72897 None:intergenic 25.0%
! ATCATATTAACAACTTGGAA+AGG + tig0022216:72891-72910 Msa1397950:intron 25.0%
GAGAGAAGAAGAATAATTGA+TGG - tig0022216:63643-63662 None:intergenic 30.0%
AAGAAGAAGAAGAAGACAAA+GGG - tig0022216:63694-63713 None:intergenic 30.0%
GTTTCATCAGAAGATTTCAA+TGG + tig0022216:63809-63828 Msa1397950:CDS 30.0%
AAGCAAATGTTGATATTGCT+AGG - tig0022216:64306-64325 None:intergenic 30.0%
!! AAGTCACAACTCTAAAACTA+TGG - tig0022216:64380-64399 None:intergenic 30.0%
AGAATCATTTATCACTTCTC+AGG - tig0022216:64453-64472 None:intergenic 30.0%
! TGTTTTCATTCTTCTATTCG+GGG + tig0022216:64481-64500 Msa1397950:intron 30.0%
!!! TTATTTCCTGATGCTGTTTT+TGG + tig0022216:64895-64914 Msa1397950:intron 30.0%
!!! CTAAAAATCTTTTTTGGACC+AGG + tig0022216:65011-65030 Msa1397950:intron 30.0%
! TATGCATGGTGTTAAATATG+TGG + tig0022216:65125-65144 Msa1397950:CDS 30.0%
! ACAAGAGTTTTTCATCATAG+CGG - tig0022216:65333-65352 None:intergenic 30.0%
CGAACATTACTAATTTACCA+AGG + tig0022216:65918-65937 Msa1397950:intron 30.0%
!! TGTTTTTGCGAATTTCATCA+AGG - tig0022216:66088-66107 None:intergenic 30.0%
AGCATGATGAGCAAATAATT+GGG - tig0022216:66388-66407 None:intergenic 30.0%
AAGCATGATGAGCAAATAAT+TGG - tig0022216:66389-66408 None:intergenic 30.0%
AAATAGTTCTCCATCAAGAA+TGG - tig0022216:66431-66450 None:intergenic 30.0%
TATGACGCATTTATAGCAAA+TGG + tig0022216:66473-66492 Msa1397950:intron 30.0%
!! GGTTTCAAATTTGGTTTGAA+GGG - tig0022216:66762-66781 None:intergenic 30.0%
!! TGGTTTCAAATTTGGTTTGA+AGG - tig0022216:66763-66782 None:intergenic 30.0%
! TCAAACCAAATTTGAAACCA+AGG + tig0022216:66763-66782 Msa1397950:intron 30.0%
AGATTCCTTGGTTTCAAATT+TGG - tig0022216:66771-66790 None:intergenic 30.0%
! AATTTGAAACCAAGGAATCT+TGG + tig0022216:66771-66790 Msa1397950:intron 30.0%
ATCAAATAACCAAGATTCCT+TGG - tig0022216:66783-66802 None:intergenic 30.0%
! TTATTTGATGTTTTTCCCCT+GGG + tig0022216:66794-66813 Msa1397950:intron 30.0%
! GTAAAAGTACAAGTACAAAG+GGG + tig0022216:66827-66846 Msa1397950:intron 30.0%
TATCTAATCTAGGAACGTAT+TGG + tig0022216:66973-66992 Msa1397950:intron 30.0%
GAAATATTTGGACATGTCAT+GGG - tig0022216:67106-67125 None:intergenic 30.0%
CTTACACGAAAGGAAATATT+TGG - tig0022216:67118-67137 None:intergenic 30.0%
! ATTCCGTTGAAGTTTTCATT+GGG + tig0022216:67159-67178 Msa1397950:intron 30.0%
! CTTTTAGATACCTCAAATCA+TGG - tig0022216:67226-67245 None:intergenic 30.0%
! CATGATTTGAGGTATCTAAA+AGG + tig0022216:67224-67243 Msa1397950:intron 30.0%
AAAAGGAATAACTTGACAGT+TGG + tig0022216:67278-67297 Msa1397950:intron 30.0%
AAGAACAAAATCTAGTAGCA+AGG + tig0022216:67307-67326 Msa1397950:intron 30.0%
! GCATTTTCTTATGGAACATT+GGG - tig0022216:67407-67426 None:intergenic 30.0%
! TGCATTTTCTTATGGAACAT+TGG - tig0022216:67408-67427 None:intergenic 30.0%
TACATAAGCAATTTACCTCT+AGG + tig0022216:67429-67448 Msa1397950:intron 30.0%
TGTGAATAAGCTGAACTATT+TGG + tig0022216:67455-67474 Msa1397950:intron 30.0%
GTGAATAAGCTGAACTATTT+GGG + tig0022216:67456-67475 Msa1397950:intron 30.0%
TGAACTATTTGGGAACAAAT+CGG + tig0022216:67466-67485 Msa1397950:intron 30.0%
ACAACCTCAAACTTAAGATT+AGG + tig0022216:67537-67556 Msa1397950:intron 30.0%
!! CTTCTAAAATTAACATGGGT+GGG - tig0022216:67655-67674 None:intergenic 30.0%
ACAACTGAAGAAAGAGAAAA+AGG - tig0022216:67723-67742 None:intergenic 30.0%
AAAATTATTGTTGCACGAAC+CGG + tig0022216:67810-67829 Msa1397950:intron 30.0%
CAGTGAAGATTAATTAAGTG+GGG - tig0022216:67883-67902 None:intergenic 30.0%
TCATAATAGATCCAAAAGGA+AGG - tig0022216:67963-67982 None:intergenic 30.0%
AACAAAATTGCATAGCTATG+AGG + tig0022216:68164-68183 Msa1397950:intron 30.0%
AATAGTCTCCTTCAAAATGT+TGG - tig0022216:68387-68406 None:intergenic 30.0%
TTTATGGACTTTAATCTGCT+CGG + tig0022216:68545-68564 Msa1397950:intron 30.0%
!! TAGTATGTCACTTTGTAACA+AGG + tig0022216:68630-68649 Msa1397950:intron 30.0%
CGTTAAACATGAATTTGAGT+GGG - tig0022216:68789-68808 None:intergenic 30.0%
CCACTCAAATTCATGTTTAA+CGG + tig0022216:68787-68806 Msa1397950:intron 30.0%
! TTAGTAGTTGTTGGTTAGAA+GGG - tig0022216:68853-68872 None:intergenic 30.0%
TTTCCTCTTTACATGTCTAA+TGG + tig0022216:68933-68952 Msa1397950:intron 30.0%
TTCCTCTTTACATGTCTAAT+GGG + tig0022216:68934-68953 Msa1397950:intron 30.0%
TCAAAGATGTTGTGCATATA+TGG - tig0022216:68973-68992 None:intergenic 30.0%
! CAGTTTAAAATCGGAAGATT+TGG + tig0022216:69168-69187 Msa1397950:CDS 30.0%
AAATCGGAAGATTTGGATAA+TGG + tig0022216:69175-69194 Msa1397950:CDS 30.0%
TTATCATAAGAATTGCACGT+TGG + tig0022216:69294-69313 Msa1397950:CDS 30.0%
! TTAGTTGATTTCTACGACAA+AGG + tig0022216:69334-69353 Msa1397950:CDS 30.0%
TGAATAACATGAGAGACATT+TGG - tig0022216:69406-69425 None:intergenic 30.0%
AAATGTCTCTCATGTTATTC+AGG + tig0022216:69405-69424 Msa1397950:CDS 30.0%
AATGATTGACAAACGACAAA+GGG - tig0022216:69950-69969 None:intergenic 30.0%
AAATGATTGACAAACGACAA+AGG - tig0022216:69951-69970 None:intergenic 30.0%
! TGTCGTTTGTCAATCATTTA+TGG + tig0022216:69952-69971 Msa1397950:intron 30.0%
!!! GCATTTTGCAGTTTTATTTC+TGG - tig0022216:69980-69999 None:intergenic 30.0%
GGATTCAGCTAAAATAAGAA+CGG + tig0022216:70057-70076 Msa1397950:intron 30.0%
AATGTTTATCAGTGTTTCTC+TGG + tig0022216:70217-70236 Msa1397950:intron 30.0%
TTGTTCCCTAATCATTTCTT+TGG + tig0022216:70248-70267 Msa1397950:intron 30.0%
TTGAAGATCTTAGGTGAAAA+GGG - tig0022216:70301-70320 None:intergenic 30.0%
ATTGAAGATCTTAGGTGAAA+AGG - tig0022216:70302-70321 None:intergenic 30.0%
AAGATTGCATTGAAGATCTT+AGG - tig0022216:70310-70329 None:intergenic 30.0%
CCGGATTGAGTTTATAATTA+AGG - tig0022216:70583-70602 None:intergenic 30.0%
TTTGTAATTAATCAACGGTC+CGG - tig0022216:70602-70621 None:intergenic 30.0%
!! GTTTGATAATTTTCACACGA+TGG + tig0022216:70667-70686 Msa1397950:intron 30.0%
AATGAAGTGACTCAAATAAG+AGG - tig0022216:70777-70796 None:intergenic 30.0%
! TTTATTGGCTGTAGTAATCT+TGG + tig0022216:71179-71198 Msa1397950:intron 30.0%
!! ATGATGAGAGCATTAACTAT+AGG + tig0022216:71284-71303 Msa1397950:intron 30.0%
TAACAATCACTCCAAAATGT+TGG - tig0022216:71365-71384 None:intergenic 30.0%
GATTGTTACACTATTAATGC+AGG + tig0022216:71377-71396 Msa1397950:intron 30.0%
TGTGTTCGAAATAGAAAATG+CGG + tig0022216:71606-71625 Msa1397950:intron 30.0%
AAGTACAAAATGATGGTTAC+TGG - tig0022216:71888-71907 None:intergenic 30.0%
TTGCTACAAGTACAAAATGA+TGG - tig0022216:71895-71914 None:intergenic 30.0%
GATGTTCGAAAAAAAGGAAA+AGG + tig0022216:72058-72077 Msa1397950:three_prime_UTR 30.0%
AAAGCTAATGTCTATCAAGA+GGG - tig0022216:72237-72256 None:intergenic 30.0%
TAGACATAAATTTCACCTCT+TGG + tig0022216:72309-72328 Msa1397950:three_prime_UTR 30.0%
AATCCTTTCAAGAAGAATAG+AGG + tig0022216:72422-72441 Msa1397950:three_prime_UTR 30.0%
AAATAGCATAGGAAATCAAC+AGG + tig0022216:72693-72712 Msa1397950:intron 30.0%
! GTTTTGTGAAATGAAGAGTT+AGG + tig0022216:72807-72826 Msa1397950:intron 30.0%
AAATGAAGAGTTAGGATACT+TGG + tig0022216:72815-72834 Msa1397950:intron 30.0%
!! TGTTGATGATGCCAATTAAT+GGG - tig0022216:72849-72868 None:intergenic 30.0%
!! TTGTTGATGATGCCAATTAA+TGG - tig0022216:72850-72869 None:intergenic 30.0%
CTTCAGTTACATAACTTACT+TGG + tig0022216:72921-72940 Msa1397950:intron 30.0%
GAAGAAGAAGAAGAAGACAA+AGG - tig0022216:63695-63714 None:intergenic 35.0%
AAAAGACACTTTCTTTGCTG+AGG + tig0022216:63832-63851 Msa1397950:CDS 35.0%
! AAAGTTCGAAATTGGTTCTC+GGG - tig0022216:64168-64187 None:intergenic 35.0%
! CAAAGTTCGAAATTGGTTCT+CGG - tig0022216:64169-64188 None:intergenic 35.0%
GAACCAATTTCGAACTTTGT+TGG + tig0022216:64170-64189 Msa1397950:intron 35.0%
GTTCCAACAAAGTTCGAAAT+TGG - tig0022216:64176-64195 None:intergenic 35.0%
TTTGTTGGAACAACTTCACT+CGG + tig0022216:64185-64204 Msa1397950:intron 35.0%
TTGTAGTTGTCAGTTTCAAG+TGG - tig0022216:64250-64269 None:intergenic 35.0%
ACAATGTCTTAGTTCAAACC+CGG + tig0022216:64266-64285 Msa1397950:intron 35.0%
AAATGTTGATATTGCTAGGC+TGG - tig0022216:64302-64321 None:intergenic 35.0%
!! CACAACTCTAAAACTATGGT+TGG - tig0022216:64376-64395 None:intergenic 35.0%
ACTTGTGTCAAGAACGAAAT+TGG + tig0022216:64396-64415 Msa1397950:intron 35.0%
CTTGTGTCAAGAACGAAATT+GGG + tig0022216:64397-64416 Msa1397950:intron 35.0%
TACACACACAGAACAAGAAA+CGG - tig0022216:64553-64572 None:intergenic 35.0%
AGATAACCAAAAACAGCATC+AGG - tig0022216:64904-64923 None:intergenic 35.0%
GGTTTACTACACTATATCTC+TGG + tig0022216:64951-64970 Msa1397950:intron 35.0%
TCAAGAAAACAAGAAGAGAC+TGG + tig0022216:65518-65537 Msa1397950:CDS 35.0%
ATCTTCATTGTCACAATCCA+AGG + tig0022216:65677-65696 Msa1397950:CDS 35.0%
CAATTAGGACATATATCCAC+CGG + tig0022216:65784-65803 Msa1397950:intron 35.0%
AATTAGGACATATATCCACC+GGG + tig0022216:65785-65804 Msa1397950:intron 35.0%
ACTTTCCTAATTTGATGTCC+CGG - tig0022216:65806-65825 None:intergenic 35.0%
! TCAGTGGTCGTATATCTTTT+TGG + tig0022216:65836-65855 Msa1397950:intron 35.0%
TATTGACAGTGCACAATCAA+TGG - tig0022216:65865-65884 None:intergenic 35.0%
TAATGTGACAGGAATGTGTA+TGG + tig0022216:65883-65902 Msa1397950:intron 35.0%
! GTTCTTACCATCTTTTACCT+TGG - tig0022216:65938-65957 None:intergenic 35.0%
GGTATTCATCTAAGTCTCAT+GGG - tig0022216:65991-66010 None:intergenic 35.0%
AGGTATTCATCTAAGTCTCA+TGG - tig0022216:65992-66011 None:intergenic 35.0%
TGAGACTTAGATGAATACCT+AGG + tig0022216:65992-66011 Msa1397950:intron 35.0%
CACTTATGATCATACTTCCT+AGG - tig0022216:66012-66031 None:intergenic 35.0%
! CTAGGAAGTATGATCATAAG+TGG + tig0022216:66010-66029 Msa1397950:intron 35.0%
GGATCTGTTTGACTAACTTA+AGG - tig0022216:66039-66058 None:intergenic 35.0%
TAAGTTAGTCAAACAGATCC+AGG + tig0022216:66039-66058 Msa1397950:intron 35.0%
!! TGACTGTTATTGAGTTGGTT+AGG - tig0022216:66219-66238 None:intergenic 35.0%
ACTCATGACTGTTATTGAGT+TGG - tig0022216:66224-66243 None:intergenic 35.0%
TAATTGGGACCAGTACATAT+AGG - tig0022216:66373-66392 None:intergenic 35.0%
TGTCGTTGAAGAGTAATTAC+TGG + tig0022216:66542-66561 Msa1397950:intron 35.0%
ATAAGTCTGAGCATAACCTT+TGG - tig0022216:66651-66670 None:intergenic 35.0%
ATAGAAGCCAACTTAGCTAT+AGG - tig0022216:66698-66717 None:intergenic 35.0%
! GTTATTTGATGTTTTTCCCC+TGG + tig0022216:66793-66812 Msa1397950:intron 35.0%
! TTTTACTTGCTTCAATCCCA+GGG - tig0022216:66813-66832 None:intergenic 35.0%
! CAAAGGGGATTTTTCTCATT+TGG + tig0022216:66842-66861 Msa1397950:intron 35.0%
AACTGCAACTTCTGATACTT+TGG + tig0022216:66914-66933 Msa1397950:intron 35.0%
! TTAGGAGCGTGTTTAACATT+TGG - tig0022216:67021-67040 None:intergenic 35.0%
GGAAATATTTGGACATGTCA+TGG - tig0022216:67107-67126 None:intergenic 35.0%
! CATTCCGTTGAAGTTTTCAT+TGG + tig0022216:67158-67177 Msa1397950:intron 35.0%
CATCCCAATGAAAACTTCAA+CGG - tig0022216:67165-67184 None:intergenic 35.0%
! TTGAAGTTTTCATTGGGATG+TGG + tig0022216:67165-67184 Msa1397950:intron 35.0%
! GGGTTCTAACTAAACACAAA+AGG + tig0022216:67261-67280 Msa1397950:intron 35.0%
GAACTATTTGGGAACAAATC+GGG + tig0022216:67467-67486 Msa1397950:intron 35.0%
TGAGCCTAATCTTAAGTTTG+AGG - tig0022216:67544-67563 None:intergenic 35.0%
!! CCTTCTAAAATTAACATGGG+TGG - tig0022216:67656-67675 None:intergenic 35.0%
! CCACCCATGTTAATTTTAGA+AGG + tig0022216:67653-67672 Msa1397950:intron 35.0%
AAATTATTGTTGCACGAACC+GGG + tig0022216:67811-67830 Msa1397950:intron 35.0%
TAATAGATCCAAAAGGAAGG+TGG - tig0022216:67960-67979 None:intergenic 35.0%
TCATTTGAATATCCACGTAC+AGG + tig0022216:68005-68024 Msa1397950:intron 35.0%
CATTTGAATATCCACGTACA+GGG + tig0022216:68006-68025 Msa1397950:intron 35.0%
ATTAATTCATACCCTGTACG+TGG - tig0022216:68020-68039 None:intergenic 35.0%
ATGAGGATCAGAAACTCAAT+CGG + tig0022216:68181-68200 Msa1397950:intron 35.0%
ATGGGGAAACTAAAAGCAAA+TGG + tig0022216:68259-68278 Msa1397950:intron 35.0%
! GTCCTTCATGAATCTTTTCT+GGG - tig0022216:68583-68602 None:intergenic 35.0%
! AGTCCTTCATGAATCTTTTC+TGG - tig0022216:68584-68603 None:intergenic 35.0%
!! ATGTCACTTTGTAACAAGGT+CGG + tig0022216:68634-68653 Msa1397950:intron 35.0%
CCGTTAAACATGAATTTGAG+TGG - tig0022216:68790-68809 None:intergenic 35.0%
! GTTAGTAGTTGTTGGTTAGA+AGG - tig0022216:68854-68873 None:intergenic 35.0%
GAGTGAGAGGAAATTAGTAA+AGG - tig0022216:68898-68917 None:intergenic 35.0%
! TCTCACTCCTTACTCTTTTT+CGG + tig0022216:68910-68929 Msa1397950:intron 35.0%
TTCCCATTAGACATGTAAAG+AGG - tig0022216:68939-68958 None:intergenic 35.0%
TTTCCAGATTGAAGCAAAGA+TGG + tig0022216:69092-69111 Msa1397950:intron 35.0%
TATCCATCTTTGCTTCAATC+TGG - tig0022216:69098-69117 None:intergenic 35.0%
ACAAGTGAAAGAGCTCATAA+GGG + tig0022216:69135-69154 Msa1397950:CDS 35.0%
GGTTGAGAACAAACAGAAAA+GGG + tig0022216:69521-69540 Msa1397950:intron 35.0%
TCAGTGATGCATGTATACAT+TGG + tig0022216:69851-69870 Msa1397950:intron 35.0%
CAGTGATGCATGTATACATT+GGG + tig0022216:69852-69871 Msa1397950:intron 35.0%
ATAAAAATGCACAAACTCGG+AGG - tig0022216:70017-70036 None:intergenic 35.0%
TTTGTTGGGAGAATGAACTA+TGG + tig0022216:70176-70195 Msa1397950:intron 35.0%
TGAAGATCTTAGGTGAAAAG+GGG - tig0022216:70300-70319 None:intergenic 35.0%
AGAATTGTCAGAAGAAGCAA+AGG - tig0022216:70342-70361 None:intergenic 35.0%
TCTTCTGACAATTCTTCAGA+CGG + tig0022216:70347-70366 Msa1397950:intron 35.0%
AAGAGTCGCAATGTCATATA+GGG - tig0022216:70800-70819 None:intergenic 35.0%
TAAGAGTCGCAATGTCATAT+AGG - tig0022216:70801-70820 None:intergenic 35.0%
GACTATGAAAGTAAGAGAGT+TGG - tig0022216:70849-70868 None:intergenic 35.0%
AAACAGTACAGTTGAAAGCA+TGG - tig0022216:70897-70916 None:intergenic 35.0%
! GTAGACTTTTTGCATAGGAT+TGG + tig0022216:71029-71048 Msa1397950:CDS 35.0%
TTATCGTTGTCGAAGTTACA+AGG - tig0022216:71854-71873 None:intergenic 35.0%
! CAAAATGATGGTTACTGGTT+AGG - tig0022216:71883-71902 None:intergenic 35.0%
CAGTGGCTTTCTTCTTAAAT+TGG - tig0022216:71978-71997 None:intergenic 35.0%
CAATTTAAGAAGAAAGCCAC+TGG + tig0022216:71976-71995 Msa1397950:three_prime_UTR 35.0%
AGCTAGAGGGAACTTTAATT+AGG - tig0022216:72128-72147 None:intergenic 35.0%
GAAAGCTAATGTCTATCAAG+AGG - tig0022216:72238-72257 None:intergenic 35.0%
! GTCAAAAGTTTTTGCTCAGA+TGG - tig0022216:72351-72370 None:intergenic 35.0%
TGAAAAAGCCCAGTATTCAA+AGG - tig0022216:72379-72398 None:intergenic 35.0%
!!! ATACTGGGCTTTTTCAATGA+TGG + tig0022216:72383-72402 Msa1397950:three_prime_UTR 35.0%
! AAGTATTGTCAACAGGAAGT+GGG - tig0022216:72454-72473 None:intergenic 35.0%
ATTTAAGGACTGATGGTATG+CGG - tig0022216:72577-72596 None:intergenic 35.0%
CTCAGTAATTTAAGGACTGA+TGG - tig0022216:72584-72603 None:intergenic 35.0%
AGTCCTTAAATTACTGAGAC+TGG + tig0022216:72586-72605 Msa1397950:three_prime_UTR 35.0%
TTTGTATGGAGTTGTATCCT+GGG - tig0022216:72655-72674 None:intergenic 35.0%
ATTTGTATGGAGTTGTATCC+TGG - tig0022216:72656-72675 None:intergenic 35.0%
!! ATTTCCTATGCTATTTCTGC+AGG - tig0022216:72689-72708 None:intergenic 35.0%
AAGGAAAGAAGGAAATCTAG+AGG - tig0022216:72782-72801 None:intergenic 35.0%
TGGAAATGAACCCCATTAAT+TGG + tig0022216:72835-72854 Msa1397950:intron 35.0%
!! GTTGATGATGCCAATTAATG+GGG - tig0022216:72848-72867 None:intergenic 35.0%
ATTAGAGAGAGCTCGAGAAA+GGG - tig0022216:63894-63913 None:intergenic 40.0%
TATTAGAGAGAGCTCGAGAA+AGG - tig0022216:63895-63914 None:intergenic 40.0%
TGGTATTTGTCGCTAGCATA+CGG - tig0022216:64230-64249 None:intergenic 40.0%
GTCAAGAACGAAATTGGGTA+AGG + tig0022216:64402-64421 Msa1397950:intron 40.0%
TTCTTGTTCTGTGTGTGTAC+AGG + tig0022216:64554-64573 Msa1397950:intron 40.0%
TCTATACCATCTGTGTTGTC+AGG + tig0022216:64582-64601 Msa1397950:CDS 40.0%
TTCCTCTCATTGATAAGCTG+AGG + tig0022216:64661-64680 Msa1397950:CDS 40.0%
TCCTCTCATTGATAAGCTGA+GGG + tig0022216:64662-64681 Msa1397950:CDS 40.0%
TGCTCACACAATTGCACATT+CGG - tig0022216:64768-64787 None:intergenic 40.0%
AATTGTGTGAGCAGGTAGTT+AGG + tig0022216:64775-64794 Msa1397950:intron 40.0%
!!! AATCTTTTTTGGACCAGGGA+TGG + tig0022216:65016-65035 Msa1397950:intron 40.0%
ATGATATCAGGTTCCCGAAT+TGG - tig0022216:65042-65061 None:intergenic 40.0%
! GGTGTTGTCACAATGATATC+AGG - tig0022216:65054-65073 None:intergenic 40.0%
CACCATGCATAAATTCCATG+CGG - tig0022216:65116-65135 None:intergenic 40.0%
!! TCAGGCGGATTACTTTATTC+TGG - tig0022216:65300-65319 None:intergenic 40.0%
ATCAGAGTTACCAGTGACAT+CGG + tig0022216:65372-65391 Msa1397950:intron 40.0%
AAAGAAGATTCCGATGTCAC+TGG - tig0022216:65385-65404 None:intergenic 40.0%
! TTTTGTTGCAGCTACACTTC+CGG + tig0022216:65582-65601 Msa1397950:intron 40.0%
!! GCTGTTTTCTTTCCATTCAC+CGG - tig0022216:65604-65623 None:intergenic 40.0%
GGTGAATGGAAAGAAAACAG+CGG + tig0022216:65603-65622 Msa1397950:CDS 40.0%
GTGAATGGAAAGAAAACAGC+GGG + tig0022216:65604-65623 Msa1397950:CDS 40.0%
TTGGTATTCAGCTTCTGTCA+TGG + tig0022216:65760-65779 Msa1397950:intron 40.0%
AGCTTCTGTCATGGTCAATT+AGG + tig0022216:65769-65788 Msa1397950:intron 40.0%
GGGACATCAAATTAGGAAAG+TGG + tig0022216:65805-65824 Msa1397950:intron 40.0%
! GTGGTCGTATATCTTTTTGG+TGG + tig0022216:65839-65858 Msa1397950:intron 40.0%
TGCACTGTCAATAATGTGAC+AGG + tig0022216:65872-65891 Msa1397950:intron 40.0%
TGTGATTCAGCTACAAGAGA+GGG - tig0022216:66263-66282 None:intergenic 40.0%
TCTCTTGTAGCTGAATCACA+CGG + tig0022216:66263-66282 Msa1397950:intron 40.0%
AGTCTATACTGGGAGAAAGA+GGG - tig0022216:66336-66355 None:intergenic 40.0%
AAGTCTATACTGGGAGAAAG+AGG - tig0022216:66337-66356 None:intergenic 40.0%
GCATCTGGAAAGTCTATACT+GGG - tig0022216:66346-66365 None:intergenic 40.0%
AGCATCTGGAAAGTCTATAC+TGG - tig0022216:66347-66366 None:intergenic 40.0%
AGTATAGACTTTCCAGATGC+TGG + tig0022216:66346-66365 Msa1397950:intron 40.0%
GTATAGACTTTCCAGATGCT+GGG + tig0022216:66347-66366 Msa1397950:intron 40.0%
! TCATCATGCTTGTTAATCCC+AGG + tig0022216:66398-66417 Msa1397950:intron 40.0%
! CATCATGCTTGTTAATCCCA+GGG + tig0022216:66399-66418 Msa1397950:intron 40.0%
! ATCATGCTTGTTAATCCCAG+GGG + tig0022216:66400-66419 Msa1397950:intron 40.0%
AGTTCTCCATCAAGAATGGT+AGG - tig0022216:66427-66446 None:intergenic 40.0%
AACCTGTCCTATAGCTAAGT+TGG + tig0022216:66688-66707 Msa1397950:intron 40.0%
TTTACTTGCTTCAATCCCAG+GGG - tig0022216:66812-66831 None:intergenic 40.0%
! CTTTTACTTGCTTCAATCCC+AGG - tig0022216:66814-66833 None:intergenic 40.0%
! AGGGGATTTTTCTCATTTGG+TGG + tig0022216:66845-66864 Msa1397950:intron 40.0%
TGTTCTCGATGTCCTATCTA+AGG + tig0022216:66873-66892 Msa1397950:intron 40.0%
ATAGCATGCCAACCTTAGAT+AGG - tig0022216:66888-66907 None:intergenic 40.0%
TGCAACTTCTGATACTTTGG+TGG + tig0022216:66917-66936 Msa1397950:intron 40.0%
TATCTAATCTAGGCACGTAC+TGG + tig0022216:67053-67072 Msa1397950:intron 40.0%
ACTGACACATCTTACACGAA+AGG - tig0022216:67128-67147 None:intergenic 40.0%
AGATACCTCAAATCATGGTC+TGG - tig0022216:67221-67240 None:intergenic 40.0%
TTTCTTATGGAACATTGGGC+TGG - tig0022216:67403-67422 None:intergenic 40.0%
AGCTTATTCACAGTTCCTAG+AGG - tig0022216:67447-67466 None:intergenic 40.0%
CCATTAAGGTAGAGTCTGTA+AGG - tig0022216:67592-67611 None:intergenic 40.0%
CCTTACAGACTCTACCTTAA+TGG + tig0022216:67589-67608 Msa1397950:intron 40.0%
GGTTTAGATTTCTGCATACC+CGG - tig0022216:67832-67851 None:intergenic 40.0%
GGTGGATATGATGCTAAAGA+TGG - tig0022216:67942-67961 None:intergenic 40.0%
! CATCATATCCACCTTCCTTT+TGG + tig0022216:67949-67968 Msa1397950:intron 40.0%
GGTGAAATGTTAAGAACCAG+GGG - tig0022216:68083-68102 None:intergenic 40.0%
GGGTGAAATGTTAAGAACCA+GGG - tig0022216:68084-68103 None:intergenic 40.0%
TGGGTGAAATGTTAAGAACC+AGG - tig0022216:68085-68104 None:intergenic 40.0%
TATTAGTAAGTAAGGTGGCC+TGG + tig0022216:68361-68380 Msa1397950:intron 40.0%
CTCCCAGAAAAGATTCATGA+AGG + tig0022216:68578-68597 Msa1397950:intron 40.0%
AATACCACATAGGTAGTTCG+AGG + tig0022216:68751-68770 Msa1397950:intron 40.0%
GAAGGGAGACTATCAGTAAT+AGG - tig0022216:68836-68855 None:intergenic 40.0%
GAAAAAGAGTAAGGAGTGAG+AGG - tig0022216:68911-68930 None:intergenic 40.0%
GAGGAAACCGAAAAAGAGTA+AGG - tig0022216:68920-68939 None:intergenic 40.0%
! GAAGACACTGTTTTCCAGTA+GGG - tig0022216:69030-69049 None:intergenic 40.0%
! TGAAGACACTGTTTTCCAGT+AGG - tig0022216:69031-69050 None:intergenic 40.0%
CACAAGTGAAAGAGCTCATA+AGG + tig0022216:69134-69153 Msa1397950:CDS 40.0%
! TCGGAAGATTTGGATAATGG+TGG + tig0022216:69178-69197 Msa1397950:CDS 40.0%
! GAAGATTTGGATAATGGTGG+TGG + tig0022216:69181-69200 Msa1397950:CDS 40.0%
TGGTGGCATTCATAGAACAA+TGG + tig0022216:69198-69217 Msa1397950:CDS 40.0%
TGAAGCTGTGGTGAAGATAT+TGG + tig0022216:69246-69265 Msa1397950:intron 40.0%
GAAGCTGTGGTGAAGATATT+GGG + tig0022216:69247-69266 Msa1397950:intron 40.0%
TGAAGATATTGGGCTATGCT+GGG + tig0022216:69257-69276 Msa1397950:intron 40.0%
! GTTGATTTCTACGACAAAGG+TGG + tig0022216:69337-69356 Msa1397950:CDS 40.0%
GGGTTGAGAACAAACAGAAA+AGG + tig0022216:69520-69539 Msa1397950:intron 40.0%
TGAGAACAAACAGAAAAGGG+AGG + tig0022216:69524-69543 Msa1397950:intron 40.0%
! GTGGAAAAGGTGGTGTTAAT+TGG - tig0022216:69665-69684 None:intergenic 40.0%
!! TAGGAAAGCATCTCCTACAT+AGG + tig0022216:69797-69816 Msa1397950:intron 40.0%
!! AGGAAAGCATCTCCTACATA+GGG + tig0022216:69798-69817 Msa1397950:intron 40.0%
AACTCACCTATTCCCTATGT+AGG - tig0022216:69813-69832 None:intergenic 40.0%
TACATGCATCACTGAGCAAA+TGG - tig0022216:69846-69865 None:intergenic 40.0%
TCTTCATGATCAGAGCTAGT+TGG + tig0022216:70111-70130 Msa1397950:intron 40.0%
TGGAGAAGGGAAAGGAAATT+GGG + tig0022216:70381-70400 Msa1397950:intron 40.0%
GAGAGATGGGATAGAAGAAA+AGG + tig0022216:70542-70561 Msa1397950:intron 40.0%
AAGAGAGTTGGATACATGCA+TGG - tig0022216:70837-70856 None:intergenic 40.0%
CAATGTTGTGCATGTGTTTC+AGG + tig0022216:70986-71005 Msa1397950:intron 40.0%
! CTGCTGTAGACTTTTTGCAT+AGG + tig0022216:71024-71043 Msa1397950:CDS 40.0%
TACAAGCTCTCTGTTGGATT+CGG - tig0022216:71102-71121 None:intergenic 40.0%
! GCTTCTTTTCCTGCTAAATG+CGG - tig0022216:71406-71425 None:intergenic 40.0%
CTAATCTTAGAGATCCTCCA+AGG - tig0022216:71701-71720 None:intergenic 40.0%
!!! GGCTTTTTCAATGATGGAAG+TGG + tig0022216:72389-72408 Msa1397950:three_prime_UTR 40.0%
GGTCCTCTATTCTTCTTGAA+AGG - tig0022216:72428-72447 None:intergenic 40.0%
! CAAGTATTGTCAACAGGAAG+TGG - tig0022216:72455-72474 None:intergenic 40.0%
CACTTCCTGTTGACAATACT+TGG + tig0022216:72453-72472 Msa1397950:three_prime_UTR 40.0%
! ATCGACCAAGTATTGTCAAC+AGG - tig0022216:72461-72480 None:intergenic 40.0%
CCTCCAGTCTCAGTAATTTA+AGG - tig0022216:72592-72611 None:intergenic 40.0%
CCTTAAATTACTGAGACTGG+AGG + tig0022216:72589-72608 Msa1397950:three_prime_UTR 40.0%
! CTGGGTTTGCTTTATATCGT+GGG - tig0022216:72637-72656 None:intergenic 40.0%
AGGAGGATGGATCATTTGTA+TGG - tig0022216:72669-72688 None:intergenic 40.0%
GCATCATCAACAATGTTACC+CGG + tig0022216:72857-72876 Msa1397950:intron 40.0%
TTGCTGAGGATAACGTTTCG+TGG + tig0022216:63846-63865 Msa1397950:CDS 45.0%
AACGTTTCGTGGAGTTCACT+TGG + tig0022216:63857-63876 Msa1397950:CDS 45.0%
GAAATGACCTGAACGAGAGA+GGG - tig0022216:63932-63951 None:intergenic 45.0%
AGAAATGACCTGAACGAGAG+AGG - tig0022216:63933-63952 None:intergenic 45.0%
TAGGCTGGACATCTTTATCC+GGG - tig0022216:64287-64306 None:intergenic 45.0%
CTAGGCTGGACATCTTTATC+CGG - tig0022216:64288-64307 None:intergenic 45.0%
ACCATCTGTGTTGTCAGGAA+AGG + tig0022216:64587-64606 Msa1397950:CDS 45.0%
TCCTTTCCTGACAACACAGA+TGG - tig0022216:64591-64610 None:intergenic 45.0%
GTAGTTATTGCTGCAGAGAC+CGG + tig0022216:64612-64631 Msa1397950:CDS 45.0%
ACTGTATGTCTTACCACTGC+CGG - tig0022216:64634-64653 None:intergenic 45.0%
CCTCTCATTGATAAGCTGAG+GGG + tig0022216:64663-64682 Msa1397950:CDS 45.0%
GGGTACAGAGGAATATTCTC+TGG + tig0022216:64683-64702 Msa1397950:CDS 45.0%
TGATAAAGAAGTCTCTCCGC+CGG + tig0022216:64716-64735 Msa1397950:CDS 45.0%
GAATGTGCAATTGTGTGAGC+AGG + tig0022216:64767-64786 Msa1397950:intron 45.0%
AGGATGGCTAATAGTCTTCG+TGG + tig0022216:64795-64814 Msa1397950:CDS 45.0%
AATGGCTGCAGCACTAACAA+TGG - tig0022216:64835-64854 None:intergenic 45.0%
TTAGTGCTGCAGCCATTTGT+GGG + tig0022216:64838-64857 Msa1397950:CDS 45.0%
CACTACCTGTTTCCCACAAA+TGG - tig0022216:64853-64872 None:intergenic 45.0%
ACATGATTGAGAAGAGCAGC+AGG - tig0022216:65075-65094 None:intergenic 45.0%
AAGCTGATATGCTCCTCTGT+GGG + tig0022216:65269-65288 Msa1397950:CDS 45.0%
! CATAGCGGAGCAAGTTAATC+AGG - tig0022216:65318-65337 None:intergenic 45.0%
TGATGCTTCAGAAGGTGAAG+AGG + tig0022216:65414-65433 Msa1397950:intron 45.0%
TCGTCTGACATGGCTTCAAT+TGG - tig0022216:65445-65464 None:intergenic 45.0%
AATTGAAGCCATGTCAGACG+AGG + tig0022216:65444-65463 Msa1397950:CDS 45.0%
ACATGTTTCCTGATGCTGAG+TGG + tig0022216:65641-65660 Msa1397950:CDS 45.0%
CATGTTTCCTGATGCTGAGT+GGG + tig0022216:65642-65661 Msa1397950:CDS 45.0%
AGGGGGAAAATATAGCACCT+TGG - tig0022216:65697-65716 None:intergenic 45.0%
ATCCACCGGGACATCAAATT+AGG + tig0022216:65798-65817 Msa1397950:intron 45.0%
TTCCTAATTTGATGTCCCGG+TGG - tig0022216:65803-65822 None:intergenic 45.0%
GGAGAGAATATCTCCTGGTT+AGG - tig0022216:66198-66217 None:intergenic 45.0%
GGTTAGGAGAGAATATCTCC+TGG - tig0022216:66203-66222 None:intergenic 45.0%
TTCAGCTACAAGAGAGGGAA+GGG - tig0022216:66258-66277 None:intergenic 45.0%
ATTCAGCTACAAGAGAGGGA+AGG - tig0022216:66259-66278 None:intergenic 45.0%
GTGTGATTCAGCTACAAGAG+AGG - tig0022216:66264-66283 None:intergenic 45.0%
TATACTGGGAGAAAGAGGGT+GGG - tig0022216:66332-66351 None:intergenic 45.0%
!!! TGTGACTTTTAGCTCACGAC+AGG + tig0022216:66511-66530 Msa1397950:intron 45.0%
ATGTTTACTCGATGGAAGGG+AGG - tig0022216:66597-66616 None:intergenic 45.0%
GGCATGTTTACTCGATGGAA+GGG - tig0022216:66600-66619 None:intergenic 45.0%
TGGCATGTTTACTCGATGGA+AGG - tig0022216:66601-66620 None:intergenic 45.0%
CGAATGGCATGTTTACTCGA+TGG - tig0022216:66605-66624 None:intergenic 45.0%
ACATGCCATTCGTTGTCTCT+TGG + tig0022216:66613-66632 Msa1397950:intron 45.0%
TTGAGCCAAGAGACAACGAA+TGG - tig0022216:66621-66640 None:intergenic 45.0%
! TTGGCTCAACTAGTCTCCAA+AGG + tig0022216:66632-66651 Msa1397950:intron 45.0%
AGCCAACTTAGCTATAGGAC+AGG - tig0022216:66693-66712 None:intergenic 45.0%
!! CTCGCTGCTTTGGAGAATTT+GGG + tig0022216:66734-66753 Msa1397950:intron 45.0%
! CTCGATGTCCTATCTAAGGT+TGG + tig0022216:66877-66896 Msa1397950:intron 45.0%
TAAGGTTGGCATGCTATGCT+AGG + tig0022216:66891-66910 Msa1397950:intron 45.0%
! TGAGGTATCTAAAAGGAGCC+AGG + tig0022216:67231-67250 Msa1397950:intron 45.0%
TGTTTAGTTAGAACCCCCCA+TGG - tig0022216:67257-67276 None:intergenic 45.0%
AGGTAGAGTCTGTAAGGCTT+GGG - tig0022216:67586-67605 None:intergenic 45.0%
AAGGTAGAGTCTGTAAGGCT+TGG - tig0022216:67587-67606 None:intergenic 45.0%
TGTGTCTGTGTGTGTGGAAT+GGG - tig0022216:67615-67634 None:intergenic 45.0%
ATGTGTCTGTGTGTGTGGAA+TGG - tig0022216:67616-67635 None:intergenic 45.0%
TCCACACACACAGACACATA+TGG + tig0022216:67617-67636 Msa1397950:intron 45.0%
CCACACACACAGACACATAT+GGG + tig0022216:67618-67637 Msa1397950:intron 45.0%
CACACACACAGACACATATG+GGG + tig0022216:67619-67638 Msa1397950:intron 45.0%
GGGGAGAAATTGAAGGTTGT+GGG - tig0022216:67781-67800 None:intergenic 45.0%
AGGGGAGAAATTGAAGGTTG+TGG - tig0022216:67782-67801 None:intergenic 45.0%
GAGAGAAGGGGAGAAATTGA+AGG - tig0022216:67788-67807 None:intergenic 45.0%
ATGTTAAGAACCAGGGGCAA+TGG - tig0022216:68077-68096 None:intergenic 45.0%
AGGATCAGAAACTCAATCGG+TGG + tig0022216:68184-68203 Msa1397950:intron 45.0%
GGATCAGAAACTCAATCGGT+GGG + tig0022216:68185-68204 Msa1397950:intron 45.0%
TCTCCTTCAAAATGTTGGCC+AGG - tig0022216:68382-68401 None:intergenic 45.0%
! TTAGCTCTCGACACTCAAGT+TGG - tig0022216:68679-68698 None:intergenic 45.0%
AGTTCCTCGAACTACCTATG+TGG - tig0022216:68758-68777 None:intergenic 45.0%
TTGTGATATCCAACCCATCC+CGG + tig0022216:69004-69023 Msa1397950:intron 45.0%
TTCAACAGCCTCAACTGTGT+TGG - tig0022216:69230-69249 None:intergenic 45.0%
GTGAAGATATTGGGCTATGC+TGG + tig0022216:69256-69275 Msa1397950:intron 45.0%
AGAATTGCACGTTGGATGAG+CGG + tig0022216:69302-69321 Msa1397950:CDS 45.0%
! AACACCACCTTTTCCACTTG+CGG + tig0022216:69668-69687 Msa1397950:intron 45.0%
TCAATGTCCGCAAGTGGAAA+AGG - tig0022216:69678-69697 None:intergenic 45.0%
TCACAATCAATGTCCGCAAG+TGG - tig0022216:69684-69703 None:intergenic 45.0%
GCATCTCCTACATAGGGAAT+AGG + tig0022216:69804-69823 Msa1397950:intron 45.0%
ATCACTGAGCAAATGGTGCA+CGG - tig0022216:69839-69858 None:intergenic 45.0%
AAACGACAAAGGGTGGTGAA+GGG - tig0022216:69940-69959 None:intergenic 45.0%
GATTGACAAACGACAAAGGG+TGG - tig0022216:69947-69966 None:intergenic 45.0%
AAACCTGCTTCTTTCGCTCA+CGG - tig0022216:70085-70104 None:intergenic 45.0%
GCGAAAGAAGCAGGTTTCTA+CGG + tig0022216:70088-70107 Msa1397950:intron 45.0%
ATTTCCTTTCCCTTCTCCAC+TGG - tig0022216:70380-70399 None:intergenic 45.0%
GTGGAGAAGGGAAAGGAAAT+TGG + tig0022216:70380-70399 Msa1397950:intron 45.0%
GGAGAAGGGAAAGGAAATTG+GGG + tig0022216:70382-70401 Msa1397950:intron 45.0%
ATCATGCTTGTACAGAGACG+AGG + tig0022216:70423-70442 Msa1397950:intron 45.0%
GGAGATGGAGTTGTGATTGT+GGG + tig0022216:70520-70539 Msa1397950:intron 45.0%
AGTTGTGATTGTGGGAGAGA+TGG + tig0022216:70528-70547 Msa1397950:intron 45.0%
GTTGTGATTGTGGGAGAGAT+GGG + tig0022216:70529-70548 Msa1397950:intron 45.0%
! TCACACGATGGTCTCTCTTT+TGG + tig0022216:70679-70698 Msa1397950:intron 45.0%
TGCTGGTAACTAGTCCGATT+TGG - tig0022216:71073-71092 None:intergenic 45.0%
! GTTGGATTCGGTATACATGC+TGG - tig0022216:71090-71109 None:intergenic 45.0%
AGCATCTACAAGCTCTCTGT+TGG - tig0022216:71108-71127 None:intergenic 45.0%
CGCTGTAAGACTCTCTTCAA+TGG - tig0022216:71945-71964 None:intergenic 45.0%
CTTCAATAGAGCAACTCCAG+TGG - tig0022216:71995-72014 None:intergenic 45.0%
AGTAACTTGGGACAGCTAGA+GGG - tig0022216:72141-72160 None:intergenic 45.0%
AGAGGGTTCATTTCACCTAC+TGG - tig0022216:72220-72239 None:intergenic 45.0%
TTCACCTCTTGGATGACATC+AGG + tig0022216:72320-72339 Msa1397950:three_prime_UTR 45.0%
GAAACCTGATGTCATCCAAG+AGG - tig0022216:72327-72346 None:intergenic 45.0%
TGACCCTTGCCTTTGAATAC+TGG + tig0022216:72367-72386 Msa1397950:three_prime_UTR 45.0%
GACCCTTGCCTTTGAATACT+GGG + tig0022216:72368-72387 Msa1397950:three_prime_UTR 45.0%
AGCCCAGTATTCAAAGGCAA+GGG - tig0022216:72373-72392 None:intergenic 45.0%
AAGCCCAGTATTCAAAGGCA+AGG - tig0022216:72374-72393 None:intergenic 45.0%
TTGTCAACAGGAAGTGGGAA+AGG - tig0022216:72449-72468 None:intergenic 45.0%
! CCTGGGTTTGCTTTATATCG+TGG - tig0022216:72638-72657 None:intergenic 45.0%
CCACGATATAAAGCAAACCC+AGG + tig0022216:72635-72654 Msa1397950:three_prime_UTR 45.0%
!! ATGCTATTTCTGCAGGAGGA+TGG - tig0022216:72682-72701 None:intergenic 45.0%
TCCTCCTGCAGAAATAGCAT+AGG + tig0022216:72682-72701 Msa1397950:intron 45.0%
!! TCCTATGCTATTTCTGCAGG+AGG - tig0022216:72686-72705 None:intergenic 45.0%
!! AAGTTTAATTATAAAAATAT+GGG - tig0022216:69769-69788 None:intergenic 5.0%
!! TAAGTTTAATTATAAAAATA+TGG - tig0022216:69770-69789 None:intergenic 5.0%
!!! ATTTTTATAATTAAACTTAT+AGG + tig0022216:69771-69790 Msa1397950:intron 5.0%
CTGCTGTGTTTGACGTGGAA+GGG - tig0022216:63765-63784 None:intergenic 50.0%
TCTGCTGTGTTTGACGTGGA+AGG - tig0022216:63766-63785 None:intergenic 50.0%
TGTGTCTGCTGTGTTTGACG+TGG - tig0022216:63770-63789 None:intergenic 50.0%
CAGCAGACACAACCCTTTGT+TGG + tig0022216:63779-63798 Msa1397950:intron 50.0%
GAAACGGCGCTTCCAACAAA+GGG - tig0022216:63794-63813 None:intergenic 50.0%
TGAAACGGCGCTTCCAACAA+AGG - tig0022216:63795-63814 None:intergenic 50.0%
CAATACACCCTCTCTCGTTC+AGG + tig0022216:63922-63941 Msa1397950:CDS 50.0%
CCCCTCAGCTTATCAATGAG+AGG - tig0022216:64666-64685 None:intergenic 50.0%
! TGATAAGCTGAGGGGTACAG+AGG + tig0022216:64671-64690 Msa1397950:CDS 50.0%
AAGCACGAGCAGAACTTTCC+TGG - tig0022216:64742-64761 None:intergenic 50.0%
GTGTGAGCAGGTAGTTAGGA+TGG + tig0022216:64779-64798 Msa1397950:intron 50.0%
GTTAGTGCTGCAGCCATTTG+TGG + tig0022216:64837-64856 Msa1397950:CDS 50.0%
TGCAGCCATTTGTGGGAAAC+AGG + tig0022216:64845-64864 Msa1397950:CDS 50.0%
CGCCGCATGGAATTTATGCA+TGG + tig0022216:65111-65130 Msa1397950:CDS 50.0%
GAAGCTGATATGCTCCTCTG+TGG + tig0022216:65268-65287 Msa1397950:CDS 50.0%
! TATTCTGGAAGCTCCCACAG+AGG - tig0022216:65285-65304 None:intergenic 50.0%
AGCGGAGCAAGTTAATCAGG+CGG - tig0022216:65315-65334 None:intergenic 50.0%
TCGTCGCATGATGCTTCAGA+AGG + tig0022216:65406-65425 Msa1397950:intron 50.0%
ATCATCCTCCTCGTCTGACA+TGG - tig0022216:65455-65474 None:intergenic 50.0%
ATGTCAGACGAGGAGGATGA+TGG + tig0022216:65454-65473 Msa1397950:CDS 50.0%
GAAGAGACTGGAGAAGAGTG+AGG + tig0022216:65530-65549 Msa1397950:CDS 50.0%
GAAAGTGGTCAGTGCATCAG+TGG + tig0022216:65820-65839 Msa1397950:intron 50.0%
TGGTTAGGAGTCTCAGACTC+TGG - tig0022216:66183-66202 None:intergenic 50.0%
! AGAGTCTGAGACTCCTAACC+AGG + tig0022216:66182-66201 Msa1397950:intron 50.0%
AGAAAGAGGGTGGGACTGAA+GGG - tig0022216:66323-66342 None:intergenic 50.0%
CTATACTGGGAGAAAGAGGG+TGG - tig0022216:66333-66352 None:intergenic 50.0%
GTACATATAGGCCCAGCATC+TGG - tig0022216:66361-66380 None:intergenic 50.0%
GATGCTGGGCCTATATGTAC+TGG + tig0022216:66361-66380 Msa1397950:intron 50.0%
TCAAGAATGGTAGGACCCCT+GGG - tig0022216:66418-66437 None:intergenic 50.0%
ATCAAGAATGGTAGGACCCC+TGG - tig0022216:66419-66438 None:intergenic 50.0%
AGGGGTCCTACCATTCTTGA+TGG + tig0022216:66418-66437 Msa1397950:intron 50.0%
!!! GACTTTTAGCTCACGACAGG+TGG + tig0022216:66514-66533 Msa1397950:intron 50.0%
!!! TTTTAGCTCACGACAGGTGG+TGG + tig0022216:66517-66536 Msa1397950:intron 50.0%
!! GCTCGCTGCTTTGGAGAATT+TGG + tig0022216:66733-66752 Msa1397950:intron 50.0%
AGGAGCCAGACCATGATTTG+AGG + tig0022216:67213-67232 Msa1397950:intron 50.0%
ATCTAAAAGGAGCCAGGCCA+TGG + tig0022216:67237-67256 Msa1397950:intron 50.0%
TCTAAAAGGAGCCAGGCCAT+GGG + tig0022216:67238-67257 Msa1397950:intron 50.0%
! GGTTTGACTCGTTGAGCGTT+TGG + tig0022216:67488-67507 Msa1397950:intron 50.0%
GTGTGTGGAATGGGCCATTA+AGG - tig0022216:67606-67625 None:intergenic 50.0%
CCCATATGTGTCTGTGTGTG+TGG - tig0022216:67621-67640 None:intergenic 50.0%
TAAGAACCAGGGGCAATGGA+AGG - tig0022216:68073-68092 None:intergenic 50.0%
GAAACTCAATCGGTGGGACA+TGG + tig0022216:68191-68210 Msa1397950:intron 50.0%
! TGGCCTGGCCAACATTTTGA+AGG + tig0022216:68376-68395 Msa1397950:intron 50.0%
! ACACTGTTTTCCAGTAGGGC+CGG - tig0022216:69026-69045 None:intergenic 50.0%
GGTGTTTGCCAACACAGTTG+AGG + tig0022216:69219-69238 Msa1397950:CDS 50.0%
AGTTGAGGCTGTTGAAGCTG+TGG + tig0022216:69234-69253 Msa1397950:CDS 50.0%
GAATTGCACGTTGGATGAGC+GGG + tig0022216:69303-69322 Msa1397950:CDS 50.0%
ATGTCCGCAAGTGGAAAAGG+TGG - tig0022216:69675-69694 None:intergenic 50.0%
TCACTGAGCAAATGGTGCAC+GGG - tig0022216:69838-69857 None:intergenic 50.0%
ACAAAGGGTGGTGAAGGGAA+TGG - tig0022216:69935-69954 None:intergenic 50.0%
CAAACGACAAAGGGTGGTGA+AGG - tig0022216:69941-69960 None:intergenic 50.0%
AGGGAAAGGAAATTGGGGAG+TGG + tig0022216:70387-70406 Msa1397950:intron 50.0%
AGATGGAGTTGTACGAGGCA+GGG + tig0022216:70475-70494 Msa1397950:intron 50.0%
AGCACGGAGGGATGATTGAA+GGG + tig0022216:70499-70518 Msa1397950:intron 50.0%
GAGGGATGATTGAAGGGAGA+TGG + tig0022216:70505-70524 Msa1397950:intron 50.0%
GGGAGATGGAGTTGTGATTG+TGG + tig0022216:70519-70538 Msa1397950:intron 50.0%
ATTGGTCGTACAGCTAGAGC+TGG + tig0022216:71047-71066 Msa1397950:CDS 50.0%
ACAGCTAGAGCTGGCCAAAT+CGG + tig0022216:71056-71075 Msa1397950:CDS 50.0%
TAGATGCTGTTCGTCGTGCA+GGG + tig0022216:71120-71139 Msa1397950:CDS 50.0%
CAGTAACTTGGGACAGCTAG+AGG - tig0022216:72142-72161 None:intergenic 50.0%
CACACCACTACATCTCACTG+AGG + tig0022216:72175-72194 Msa1397950:three_prime_UTR 50.0%
CTCACCTCAGTGAGATGTAG+TGG - tig0022216:72182-72201 None:intergenic 50.0%
CGGTGGAAGGATCTGAGTAA+TGG - tig0022216:72557-72576 None:intergenic 50.0%
TAAGGACTGATGGTATGCGG+TGG - tig0022216:72574-72593 None:intergenic 50.0%
AAGAAAGCCGCCTAATAGCC+CGG + tig0022216:72974-72993 Msa1397950:three_prime_UTR 50.0%
ACGAGCAGAACTTTCCTGGC+CGG - tig0022216:64738-64757 None:intergenic 55.0%
TGGACCAGGGATGGCCAATT+CGG + tig0022216:65025-65044 Msa1397950:intron 55.0%
! CGTTGATAGAAGACGCCGCA+TGG + tig0022216:65098-65117 Msa1397950:CDS 55.0%
TGAAGCCATGTCAGACGAGG+AGG + tig0022216:65447-65466 Msa1397950:CDS 55.0%
! CGAGGAGGATGATGGTAACG+AGG + tig0022216:65462-65481 Msa1397950:CDS 55.0%
GCAGCTACACTTCCGGTGAA+TGG + tig0022216:65589-65608 Msa1397950:intron 55.0%
CCACTAACCCACTCAGCATC+AGG - tig0022216:65652-65671 None:intergenic 55.0%
!! CCTGATGCTGAGTGGGTTAG+TGG + tig0022216:65649-65668 Msa1397950:CDS 55.0%
GAAAGAGGGTGGGACTGAAG+GGG - tig0022216:66322-66341 None:intergenic 55.0%
GAGAAAGAGGGTGGGACTGA+AGG - tig0022216:66324-66343 None:intergenic 55.0%
CTAAAAGGAGCCAGGCCATG+GGG + tig0022216:67239-67258 Msa1397950:intron 55.0%
TAAAAGGAGCCAGGCCATGG+GGG + tig0022216:67240-67259 Msa1397950:intron 55.0%
GAGTCTGTAAGGCTTGGGCT+AGG - tig0022216:67581-67600 None:intergenic 55.0%
AACCAGGGGCAATGGAAGGT+GGG - tig0022216:68069-68088 None:intergenic 55.0%
ACATGGCAGTGATCGTGCGT+TGG + tig0022216:68208-68227 Msa1397950:intron 55.0%
! TTTTCCAGTAGGGCCGGGAT+GGG - tig0022216:69020-69039 None:intergenic 55.0%
! CACTGTTTTCCAGTAGGGCC+GGG - tig0022216:69025-69044 None:intergenic 55.0%
! TGTACTGATGCAGCTGCTCG+TGG + tig0022216:69370-69389 Msa1397950:CDS 55.0%
AGAGCTGGGGAAGGAGTTAG+CGG - tig0022216:69901-69920 None:intergenic 55.0%
TGAAGGGAATGGAGAGGAGG+AGG - tig0022216:69924-69943 None:intergenic 55.0%
TGGTGAAGGGAATGGAGAGG+AGG - tig0022216:69927-69946 None:intergenic 55.0%
TTCAGACGGTGAGAGTCCAG+TGG + tig0022216:70361-70380 Msa1397950:intron 55.0%
GGTGAGAGTCCAGTGGAGAA+GGG + tig0022216:70368-70387 Msa1397950:intron 55.0%
GAGTCCAGTGGAGAAGGGAA+AGG + tig0022216:70373-70392 Msa1397950:intron 55.0%
TGCTTGTACAGAGACGAGGC+AGG + tig0022216:70427-70446 Msa1397950:intron 55.0%
GCTTGTACAGAGACGAGGCA+GGG + tig0022216:70428-70447 Msa1397950:intron 55.0%
CAGCACGGAGGGATGATTGA+GGG + tig0022216:70451-70470 Msa1397950:intron 55.0%
AGCACGGAGGGATGATTGAG+GGG + tig0022216:70452-70471 Msa1397950:intron 55.0%
GAGGGATGATTGAGGGGAGA+TGG + tig0022216:70458-70477 Msa1397950:intron 55.0%
AGGGGAGATGGAGTTGTACG+AGG + tig0022216:70470-70489 Msa1397950:intron 55.0%
GAGATGGAGTTGTACGAGGC+AGG + tig0022216:70474-70493 Msa1397950:intron 55.0%
CAGCACGGAGGGATGATTGA+AGG + tig0022216:70451-70470 Msa1397950:intron 55.0%
GTAGATGCTGTTCGTCGTGC+AGG + tig0022216:71119-71138 Msa1397950:CDS 55.0%
AGATGCTGTTCGTCGTGCAG+GGG + tig0022216:71121-71140 Msa1397950:CDS 55.0%
TGCAGGAGACCGCATTTAGC+AGG + tig0022216:71394-71413 Msa1397950:intron 55.0%
GACTGATGGTATGCGGTGGA+AGG - tig0022216:72570-72589 None:intergenic 55.0%
!! ATTCGGGGTGCTGACTGCTG+AGG + tig0022216:64496-64515 Msa1397950:intron 60.0%
ATTGCTGCAGAGACCGGCAG+TGG + tig0022216:64618-64637 Msa1397950:CDS 60.0%
AGCAGAACTTTCCTGGCCGG+CGG - tig0022216:64735-64754 None:intergenic 60.0%
GGACCAGGGATGGCCAATTC+GGG + tig0022216:65026-65045 Msa1397950:intron 60.0%
GTTCCCGAATTGGCCATCCC+TGG - tig0022216:65032-65051 None:intergenic 60.0%
GCTCATCTCGCTCGCTGCTT+TGG + tig0022216:66724-66743 Msa1397950:intron 60.0%
AAAAGGAGCCAGGCCATGGG+GGG + tig0022216:67241-67260 Msa1397950:intron 60.0%
AGTTAGAACCCCCCATGGCC+TGG - tig0022216:67252-67271 None:intergenic 60.0%
TACCCACCTTCCATTGCCCC+TGG + tig0022216:68064-68083 Msa1397950:intron 60.0%
GAACCAGGGGCAATGGAAGG+TGG - tig0022216:68070-68089 None:intergenic 60.0%
! GTTTTCCAGTAGGGCCGGGA+TGG - tig0022216:69021-69040 None:intergenic 60.0%
TGGGGAAGGAGTTAGCGGAG+AGG - tig0022216:69896-69915 None:intergenic 60.0%
TGGAGAGGAGGAGGAGAGCT+GGG - tig0022216:69915-69934 None:intergenic 60.0%
ATGGAGAGGAGGAGGAGAGC+TGG - tig0022216:69916-69935 None:intergenic 60.0%
GGGTGGTGAAGGGAATGGAG+AGG - tig0022216:69930-69949 None:intergenic 60.0%
GAGCCGTGAGCGAAAGAAGC+AGG + tig0022216:70079-70098 Msa1397950:intron 60.0%
CGGTGAGAGTCCAGTGGAGA+AGG + tig0022216:70367-70386 Msa1397950:intron 60.0%
GCAGCACGGAGGGATGATTG+AGG + tig0022216:70450-70469 Msa1397950:intron 60.0%
TTGTACGAGGCAGGGCAGCA+CGG + tig0022216:70483-70502 Msa1397950:intron 60.0%
GTTCGTCGTGCAGGGGAACT+CGG + tig0022216:71128-71147 Msa1397950:CDS 60.0%
AGGGGAACTCGGTCTACCTG+TGG + tig0022216:71139-71158 Msa1397950:CDS 60.0%
AAGAAGTCTCTCCGCCGGCC+AGG + tig0022216:64721-64740 Msa1397950:CDS 65.0%
TGATGCAGCTGCTCGTGGCG+TGG + tig0022216:69375-69394 Msa1397950:CDS 65.0%
AGGAGGAGGAGAGCTGGGGA+AGG - tig0022216:69910-69929 None:intergenic 65.0%
GGAGAGGAGGAGGAGAGCTG+GGG - tig0022216:69914-69933 None:intergenic 65.0%
AGAGACGAGGCAGGGCAGCA+CGG + tig0022216:70436-70455 Msa1397950:intron 65.0%
CCAGTAGGGCCGGGATGGGT+TGG - tig0022216:69016-69035 None:intergenic 70.0%
CCAACCCATCCCGGCCCTAC+TGG + tig0022216:69013-69032 Msa1397950:intron 70.0%
ACGAGGCAGGGCAGCACGGA+GGG + tig0022216:70440-70459 Msa1397950:intron 70.0%
TACGAGGCAGGGCAGCACGG+AGG + tig0022216:70486-70505 Msa1397950:intron 70.0%
ACGAGGCAGGGCAGCACGGA+GGG + tig0022216:70440-70459 Msa1397950:intron 70.0%
GACGAGGCAGGGCAGCACGG+AGG + tig0022216:70439-70458 Msa1397950:intron 75.0%
Chromosome Type Strat End Strand Name
tig0022216 gene 63584 73002 63584 ID=Msa1397950;Name=Msa1397950
tig0022216 mRNA 63584 73002 63584 ID=Msa1397950-mRNA-1;Parent=Msa1397950;Name=Msa1397950-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.57|0.33|1|0.42|0.26|15|782|534
tig0022216 exon 63584 63757 63584 ID=Msa1397950-mRNA-1:exon:16332;Parent=Msa1397950-mRNA-1
tig0022216 exon 63785 63943 63785 ID=Msa1397950-mRNA-1:exon:16333;Parent=Msa1397950-mRNA-1
tig0022216 exon 64576 64770 64576 ID=Msa1397950-mRNA-1:exon:16334;Parent=Msa1397950-mRNA-1
tig0022216 exon 64789 64866 64789 ID=Msa1397950-mRNA-1:exon:16335;Parent=Msa1397950-mRNA-1
tig0022216 exon 65033 65146 65033 ID=Msa1397950-mRNA-1:exon:16336;Parent=Msa1397950-mRNA-1
tig0022216 exon 65259 65306 65259 ID=Msa1397950-mRNA-1:exon:16337;Parent=Msa1397950-mRNA-1
tig0022216 exon 65371 65377 65371 ID=Msa1397950-mRNA-1:exon:16338;Parent=Msa1397950-mRNA-1
tig0022216 exon 65428 65568 65428 ID=Msa1397950-mRNA-1:exon:16339;Parent=Msa1397950-mRNA-1
tig0022216 exon 65593 65698 65593 ID=Msa1397950-mRNA-1:exon:16340;Parent=Msa1397950-mRNA-1
tig0022216 exon 69099 69255 69099 ID=Msa1397950-mRNA-1:exon:16341;Parent=Msa1397950-mRNA-1
tig0022216 exon 69262 69426 69262 ID=Msa1397950-mRNA-1:exon:16342;Parent=Msa1397950-mRNA-1
tig0022216 exon 71008 71160 71008 ID=Msa1397950-mRNA-1:exon:16343;Parent=Msa1397950-mRNA-1
tig0022216 exon 71399 71450 71399 ID=Msa1397950-mRNA-1:exon:16344;Parent=Msa1397950-mRNA-1
tig0022216 exon 71912 72686 71912 ID=Msa1397950-mRNA-1:exon:16345;Parent=Msa1397950-mRNA-1
tig0022216 exon 72940 73002 72940 ID=Msa1397950-mRNA-1:exon:16346;Parent=Msa1397950-mRNA-1
tig0022216 CDS 63584 63757 63584 ID=Msa1397950-mRNA-1:cds;Parent=Msa1397950-mRNA-1
tig0022216 CDS 63785 63943 63785 ID=Msa1397950-mRNA-1:cds;Parent=Msa1397950-mRNA-1
tig0022216 CDS 64576 64770 64576 ID=Msa1397950-mRNA-1:cds;Parent=Msa1397950-mRNA-1
tig0022216 CDS 64789 64866 64789 ID=Msa1397950-mRNA-1:cds;Parent=Msa1397950-mRNA-1
tig0022216 CDS 65033 65146 65033 ID=Msa1397950-mRNA-1:cds;Parent=Msa1397950-mRNA-1
tig0022216 CDS 65259 65306 65259 ID=Msa1397950-mRNA-1:cds;Parent=Msa1397950-mRNA-1
tig0022216 CDS 65371 65377 65371 ID=Msa1397950-mRNA-1:cds;Parent=Msa1397950-mRNA-1
tig0022216 CDS 65428 65568 65428 ID=Msa1397950-mRNA-1:cds;Parent=Msa1397950-mRNA-1
tig0022216 CDS 65593 65698 65593 ID=Msa1397950-mRNA-1:cds;Parent=Msa1397950-mRNA-1
tig0022216 CDS 69099 69255 69099 ID=Msa1397950-mRNA-1:cds;Parent=Msa1397950-mRNA-1
tig0022216 CDS 69262 69426 69262 ID=Msa1397950-mRNA-1:cds;Parent=Msa1397950-mRNA-1
tig0022216 CDS 71008 71160 71008 ID=Msa1397950-mRNA-1:cds;Parent=Msa1397950-mRNA-1
tig0022216 CDS 71399 71450 71399 ID=Msa1397950-mRNA-1:cds;Parent=Msa1397950-mRNA-1
tig0022216 CDS 71912 71967 71912 ID=Msa1397950-mRNA-1:cds;Parent=Msa1397950-mRNA-1
tig0022216 three_prime_UTR 71968 72686 71968 ID=Msa1397950-mRNA-1:three_prime_utr;Parent=Msa1397950-mRNA-1
tig0022216 three_prime_UTR 72940 73002 72940 ID=Msa1397950-mRNA-1:three_prime_utr;Parent=Msa1397950-mRNA-1
Gene Sequence

>Msa1397950

ATGAACGTTACTCGTTCTGCTCTGAAGCTCCATCTTCAAAATTCACCTATTTGCTACCATCAATTATTCTTCTTCTCTCGATTCAACAATGCTCTTATTCACAATCTCCCTTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTTCAATTTCAATGCAACGCGATTCTTTTCTACACAACCCTTTGTTGGAAGCGCCGTTTCATCAGAAGATTTCAATGGAAAAGACACTTTCTTTGCTGAGGATAACGTTTCGTGGAGTTCACTTGGTCTTTCTCATACCCTTTCTCGAGCTCTCTCTAATATTGCTCTCAATACACCCTCTCTCGTTCAGGCTTCTTCTATACCATCTGTGTTGTCAGGAAAGGATGTAGTTATTGCTGCAGAGACCGGCAGTGGTAAGACATACAGTTATCTGCTTCCTCTCATTGATAAGCTGAGGGGTACAGAGGAATATTCTCTGGATGTTGTATCTGATAAAGAAGTCTCTCCGCCGGCCAGGAAAGTTCTGCTCGTGCTTTGTCCGAATGTAGTTAGGATGGCTAATAGTCTTCGTGGAGACAATGATGAAACCATTGTTAGTGCTGCAGCCATTTGTGGGAAACAGGGATGGCCAATTCGGGAACCTGATATCATTGTGACAACACCTGCTGCTCTTCTCAATCATGTTGACGTTGATAGAAGACGCCGCATGGAATTTATGCATGGTGTTAAATATGTGGTGTTTGATGAAGCTGATATGCTCCTCTGTGGGAGCTTCCAGAATAAATATCAGAGTGAAGAGGAATTTCCAATTGAAGCCATGTCAGACGAGGAGGATGATGGTAACGAGGATATTGCCAATATTAATAACGAAGCTGAATCTGTCAAGAAAACAAGAAGAGACTGGAGAAGAGTGAGGAAATATTTTGAGCGTACTACACTTCCGGTGAATGGAAAGAAAACAGCGGGAGCATTATTGAAACACATGTTTCCTGATGCTGAGTGGGTTAGTGGAAACTATCTTCATTGTCACAATCCAAGATTGAAGCAAAGATGGATAGAAGTGACTGTTGATACACAAGTGAAAGAGCTCATAAGGGCTGTGAATCACAGTTTAAAATCGGAAGATTTGGATAATGGTGGTGGCATTCATAGAACAATGGTGTTTGCCAACACAGTTGAGGCTGTTGAAGCTGTGATATTGGGCTATGCTGGGCTTGAATGTTTACGTTATCATAAGAATTGCACGTTGGATGAGCGGGCACAAACTTTAGTTGATTTCTACGACAAAGGTGGTGTTCTTGTATGTACTGATGCAGCTGCTCGTGGCGTGGATATTCCAAATGTCTCTCATGTTATTCAGGCAGATTTTGCTACTTCTGCTGTAGACTTTTTGCATAGGATTGGTCGTACAGCTAGAGCTGGCCAAATCGGACTAGTTACCAGCATGTATACCGAATCCAACAGAGAGCTTGTAGATGCTGTTCGTCGTGCAGGGGAACTCGGTCTACCTGTGGAGACCGCATTTAGCAGGAAAAGAAGCTTCCGTAACAAGATAAAAAAGAAAGCAAGTGCTAACAAAGTCAGAGATTCAGCAACCATTGAAGAGAGTCTTACAGCGTGA
Protein sequence

>Msa1397950

MNVTRSALKLHLQNSPICYHQLFFFSRFNNALIHNLPLSSSSSSSSSLFNFNATRFFSTQPFVGSAVSSEDFNGKDTFFAEDNVSWSSLGLSHTLSRALSNIALNTPSLVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLIDKLRGTEEYSLDVVSDKEVSPPARKVLLVLCPNVVRMANSLRGDNDETIVSAAAICGKQGWPIREPDIIVTTPAALLNHVDVDRRRRMEFMHGVKYVVFDEADMLLCGSFQNKYQSEEEFPIEAMSDEEDDGNEDIANINNEAESVKKTRRDWRRVRKYFERTTLPVNGKKTAGALLKHMFPDAEWVSGNYLHCHNPRLKQRWIEVTVDTQVKELIRAVNHSLKSEDLDNGGGIHRTMVFANTVEAVEAVILGYAGLECLRYHKNCTLDERAQTLVDFYDKGGVLVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTARAGQIGLVTSMYTESNRELVDAVRRAGELGLPVETAFSRKRSFRNKIKKKASANKVRDSATIEESLTA*