AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0468160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0468160 MtrunA17_Chr3g0116321 98.495 465 7 0 1 465 1 465 0.0 945
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0468160 AT3G48500.1 69.915 472 129 4 1 465 1 466 0.0 681
Msa0468160 AT3G48500.2 65.868 501 129 5 1 465 1 495 0.0 665

Find 147 sgRNAs with CRISPR-Local

Find 545 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAGAGGGTTTAAGGTTTA+AGG 0.114801 3_3:+69697487 None:intergenic
GGAATAAGGGAGAGGGTTTA+AGG 0.214064 3_3:+69697480 None:intergenic
GGTACTAATGCATTCTTATA+AGG 0.230750 3_3:+69690819 None:intergenic
TGGTGGATGACGGTGGAATA+AGG 0.231461 3_3:+69697466 None:intergenic
GGAAGCTAATAAGGATTTAT+TGG 0.236286 3_3:-69696844 Msa0468160:CDS
GGCGAAGCAGTTTGAGATTA+AGG 0.241674 3_3:-69697114 Msa0468160:CDS
AACCAATCATTGTTCTTTAT+AGG 0.253075 3_3:+69695134 None:intergenic
TAAAGAACAATGATTGGTTT+TGG 0.254290 3_3:-69695130 Msa0468160:CDS
TACATCAGATGATCTATATT+TGG 0.254545 3_3:+69693474 None:intergenic
GGTTTAAGGTTTAAGGGTTT+AGG 0.271336 3_3:+69697494 None:intergenic
GAAGAAGAAGATTGAGGAAA+TGG 0.271584 3_3:-69697159 Msa0468160:CDS
TGCTTCGTCTTCAGATTCTT+TGG 0.272263 3_3:+69697340 None:intergenic
ATTGGAAGAGGAATCTTATA+AGG 0.274488 3_3:-69696826 Msa0468160:intron
AGTGACGGAAGAGGAGTATT+TGG 0.296475 3_3:-69697135 Msa0468160:CDS
TCTTCCTCTGGCTTGTCTCC+TGG 0.300554 3_3:+69692995 None:intergenic
GAAAGTGAAGAGATAAGAAT+TGG 0.303313 3_3:+69697517 None:intergenic
CGGAGGAGTTGAAGACTAAA+TGG 0.307855 3_3:-69697082 Msa0468160:CDS
GTTTAAGGTTTAAGGGTTTA+GGG 0.321489 3_3:+69697495 None:intergenic
GTCCGCGCGAATTCGGCTTC+AGG 0.329940 3_3:+69697263 None:intergenic
GGAGAGGGTTTAAGGTTTAA+GGG 0.330041 3_3:+69697488 None:intergenic
TGAGTGGGTGGAAGCTAATA+AGG 0.337017 3_3:-69696853 Msa0468160:CDS
ATTAATCCTGATAAATATAA+AGG 0.347698 3_3:-69690912 Msa0468160:CDS
GACCGTCATTGTTGAAATTA+CGG 0.356334 3_3:-69695081 Msa0468160:intron
GGAGGCGAAGAGAGTGAGGT+TGG 0.363629 3_3:-69696955 Msa0468160:CDS
TCTTCGTCACGGTGAAATAT+TGG 0.368899 3_3:+69693310 None:intergenic
TGAGATTAAGGAAGATGTTC+CGG 0.369550 3_3:-69697102 Msa0468160:CDS
AGCGAGATCCTTATCGCTTC+CGG 0.369751 3_3:-69693524 Msa0468160:CDS
TTGGCCTCCAAGAGGGTGGG+AGG 0.370988 3_3:-69697021 Msa0468160:CDS
TTCCTATAAAGAACAATGAT+TGG 0.376316 3_3:-69695136 Msa0468160:CDS
ACGAAGCACGTCGCCGCAAC+TGG 0.379056 3_3:-69697325 Msa0468160:CDS
GAATGTTGAACCCTAGGTAT+AGG 0.380725 3_3:-69697181 Msa0468160:CDS
TGGAGGAAGGTTTCGTCGAC+GGG 0.384013 3_3:+69697380 None:intergenic
TACTAATCCAGATGAATTGC+GGG 0.389911 3_3:-69693287 Msa0468160:intron
GAGACTCGTCCGCGCGAATT+CGG 0.391123 3_3:+69697256 None:intergenic
GGTGGATGACGGTGGAATAA+GGG 0.391608 3_3:+69697467 None:intergenic
GTGCAAACCCGCAATTCATC+TGG 0.394940 3_3:+69693280 None:intergenic
AAAGTGAAGAGATAAGAATT+GGG 0.395883 3_3:+69697518 None:intergenic
CGATCCACCTCCCACCCTCT+TGG 0.399413 3_3:+69697014 None:intergenic
TCCTCCCAGGGTGATAATCT+TGG 0.407958 3_3:+69696692 None:intergenic
AGTTGGTTCCGCCGAGGGAT+TGG 0.408224 3_3:-69697040 Msa0468160:CDS
AACGAAGTTCGATCGGGAAC+CGG 0.411671 3_3:+69693505 None:intergenic
GAAAATAGAGGTTCTTCCTC+TGG 0.426046 3_3:+69692983 None:intergenic
AGGTTGGAGGATATTGAAAA+TGG 0.426184 3_3:-69696939 Msa0468160:CDS
AAGAAGAAGATTGAGGAAAT+GGG 0.426271 3_3:-69697158 Msa0468160:CDS
CAACTGGATCGAACGCGGTT+GGG 0.427640 3_3:-69697309 Msa0468160:CDS
TGAAACTGATGATGTGTGTT+TGG 0.437905 3_3:-69696907 Msa0468160:CDS
TCGAACGCGGTTGGGCTCCA+TGG 0.438642 3_3:-69697301 Msa0468160:CDS
ATCGGGAACCGGAAGCGATA+AGG 0.446047 3_3:+69693516 None:intergenic
TAATCACCCATATGTTGAAA+AGG 0.454207 3_3:-69692960 Msa0468160:intron
TATTCGTGAAGCGCATAAGA+TGG 0.461672 3_3:-69696976 Msa0468160:CDS
TCCACCTCCCACCCTCTTGG+AGG 0.462311 3_3:+69697017 None:intergenic
GTGAAATAGCTTACTTGGCC+AGG 0.463440 3_3:+69696509 None:intergenic
TCTTCTTCTTCCTATACCTA+GGG 0.467526 3_3:+69697171 None:intergenic
GGGGCATTTGTTGACATTGG+TGG 0.468311 3_3:-69695860 Msa0468160:CDS
CATTTAGTCTTCAACTCCTC+CGG 0.473037 3_3:+69697083 None:intergenic
ACAACTTTGCATCTCTATCA+AGG 0.473424 3_3:-69695881 Msa0468160:CDS
GCCTCCAAGAGGGTGGGAGG+TGG 0.474279 3_3:-69697018 Msa0468160:CDS
GGCGAAGAGAGTGAGGTTGG+AGG 0.479470 3_3:-69696952 Msa0468160:CDS
TAATAAGGATTTATTGGAAG+AGG 0.483601 3_3:-69696838 Msa0468160:CDS
GACTAAATGGGCAGGACCGT+TGG 0.493791 3_3:-69697069 Msa0468160:CDS
GGGGAATTCATCGGAGGTGA+AGG 0.497266 3_3:+69697400 None:intergenic
GGAAATGGGAGTGACGGAAG+AGG 0.499634 3_3:-69697144 Msa0468160:CDS
GCAACTGGATCGAACGCGGT+TGG 0.499741 3_3:-69697310 Msa0468160:CDS
CGAACGCGGTTGGGCTCCAT+GGG 0.501706 3_3:-69697300 Msa0468160:CDS
GGTGGTTTGCGGTGGAGTAG+AGG 0.501768 3_3:+69697443 None:intergenic
GGTGAAGTTGGTTCCGCCGA+GGG 0.501884 3_3:-69697045 Msa0468160:CDS
TTGGAGGAAGGTTTCGTCGA+CGG 0.503010 3_3:+69697379 None:intergenic
AGGACCGTTGGTGGTGAAGT+TGG 0.505436 3_3:-69697057 Msa0468160:CDS
ATCTTCTTCTTCCTATACCT+AGG 0.506020 3_3:+69697170 None:intergenic
CAAGGGGCATTTGTTGACAT+TGG 0.506627 3_3:-69695863 Msa0468160:CDS
GATTGAGGAAATGGGAGTGA+CGG 0.512092 3_3:-69697150 Msa0468160:CDS
CGGTGGTGAGAGGTGGTTTG+CGG 0.516980 3_3:+69697432 None:intergenic
GTATAGGAAGAAGAAGATTG+AGG 0.517620 3_3:-69697165 Msa0468160:CDS
GAGCTACCATTCTATTATCC+TGG 0.521386 3_3:-69696527 Msa0468160:CDS
AAGATTATCACCCTGGGAGG+AGG 0.522356 3_3:-69696690 Msa0468160:CDS
GGAGTAGAGGTGGTGGATGA+CGG 0.524591 3_3:+69697456 None:intergenic
TCCACAAAACGAAGTTCGAT+CGG 0.527234 3_3:+69693498 None:intergenic
GATTCGCCATCACATAAAAG+TGG 0.529030 3_3:-69695108 Msa0468160:CDS
TATGGGTGATTAGAAAATAG+AGG 0.529683 3_3:+69692971 None:intergenic
GGGATTGGCCTCCAAGAGGG+TGG 0.530355 3_3:-69697025 Msa0468160:CDS
TGTGTGTTTGGATAGGTATA+AGG 0.534464 3_3:-69696895 Msa0468160:CDS
TTGCGGTGGAGTAGAGGTGG+TGG 0.538797 3_3:+69697449 None:intergenic
AGGGCCGAAGGTTTGGAGGA+AGG 0.539281 3_3:+69697367 None:intergenic
CACCCTGGGAGGAGGAAAAG+AGG 0.541138 3_3:-69696682 Msa0468160:CDS
GAAAAGAGGCAAGGATTACA+AGG 0.542147 3_3:-69696668 Msa0468160:CDS
CCACAAAACGAAGTTCGATC+GGG 0.542762 3_3:+69693499 None:intergenic
CCTCTTGGAGGCCAATCCCT+CGG 0.551566 3_3:+69697029 None:intergenic
GGATTGGCCTCCAAGAGGGT+GGG 0.552876 3_3:-69697024 Msa0468160:CDS
GGAGGAGTTGAAGACTAAAT+GGG 0.553677 3_3:-69697081 Msa0468160:CDS
TGGTGAGAGGTGGTTTGCGG+TGG 0.553772 3_3:+69697435 None:intergenic
ATTTGCAGCGTGACTGTGGA+AGG 0.554574 3_3:-69693039 Msa0468160:intron
CGAGGGATTGGCCTCCAAGA+GGG 0.557359 3_3:-69697028 Msa0468160:CDS
TTCGTCGACGGGGAATTCAT+CGG 0.563473 3_3:+69697391 None:intergenic
CAACTTTGCATCTCTATCAA+GGG 0.567918 3_3:-69695880 Msa0468160:CDS
AAGTGAAGAGATAAGAATTG+GGG 0.569311 3_3:+69697519 None:intergenic
CCTATTCCTAGAAAAGATCC+AGG 0.570936 3_3:-69693013 Msa0468160:CDS
ATTGCAGATTTGTGTGGGGA+AGG 0.573789 3_3:-69695906 Msa0468160:intron
TAAATGGGCAGGACCGTTGG+TGG 0.575306 3_3:-69697066 Msa0468160:CDS
ACTTGGCCAGGATAATAGAA+TGG 0.577181 3_3:+69696521 None:intergenic
AGAGGCAAGGATTACAAGGA+TGG 0.582813 3_3:-69696664 Msa0468160:CDS
TCGTCACGGTGAAATATTGG+TGG 0.584435 3_3:+69693313 None:intergenic
TTAGCGACGGTGGTGAGAGG+TGG 0.586163 3_3:+69697425 None:intergenic
GAAACCTTCCTCCAAACCTT+CGG 0.586186 3_3:-69697371 Msa0468160:CDS
GGTTTGCGGTGGAGTAGAGG+TGG 0.586982 3_3:+69697446 None:intergenic
GAGTTGAAGACTAAATGGGC+AGG 0.587356 3_3:-69697077 Msa0468160:CDS
AGAAGTTCCTCTGAGCTCGC+CGG 0.588098 3_3:-69697222 Msa0468160:CDS
GGAACCAACTTCACCACCAA+CGG 0.589853 3_3:+69697053 None:intergenic
ATGACGGTGGAATAAGGGAG+AGG 0.591429 3_3:+69697472 None:intergenic
CACCGTAATTTCAACAATGA+CGG 0.593948 3_3:+69695079 None:intergenic
TTTGAAACAGTATAATGAGT+GGG 0.596431 3_3:-69696868 Msa0468160:CDS
TAAAATTTGCAGCGTGACTG+TGG 0.599739 3_3:-69693043 Msa0468160:intron
CTAAAAGCTTCAATCGACTC+CGG 0.600045 3_3:+69697203 None:intergenic
GGAGTGAGAATCTCTTCCCA+TGG 0.601535 3_3:+69697284 None:intergenic
AGATGGAGGCGAAGAGAGTG+AGG 0.602803 3_3:-69696959 Msa0468160:CDS
TGGTGAAGTTGGTTCCGCCG+AGG 0.603337 3_3:-69697046 Msa0468160:CDS
CTGATGATGTGTGTTTGGAT+AGG 0.603876 3_3:-69696902 Msa0468160:CDS
AACCGCGTTCGATCCAGTTG+CGG 0.604282 3_3:+69697312 None:intergenic
ATACTAATCCAGATGAATTG+CGG 0.608071 3_3:-69693288 Msa0468160:CDS
GTAGAGGTGGTGGATGACGG+TGG 0.611103 3_3:+69697459 None:intergenic
CGCCGCAACTGGATCGAACG+CGG 0.614662 3_3:-69697314 Msa0468160:CDS
GATTTAGCGACGGTGGTGAG+AGG 0.616242 3_3:+69697422 None:intergenic
CGTCACGGTGAAATATTGGT+GGG 0.618017 3_3:+69693314 None:intergenic
CTCCTGAAGCCGAATTCGCG+CGG 0.619073 3_3:-69697265 Msa0468160:CDS
AACTTTGCATCTCTATCAAG+GGG 0.623804 3_3:-69695879 Msa0468160:CDS
CAAGGATTACAAGGATGGCA+TGG 0.624035 3_3:-69696659 Msa0468160:intron
TGACGGTGGAATAAGGGAGA+GGG 0.624820 3_3:+69697473 None:intergenic
GGAGGAAGGTTTCGTCGACG+GGG 0.625945 3_3:+69697381 None:intergenic
CCGAGGGATTGGCCTCCAAG+AGG 0.628072 3_3:-69697029 Msa0468160:CDS
CTGGATTAGTATCTTCGTCA+CGG 0.631090 3_3:+69693299 None:intergenic
TAGACCAAGATTATCACCCT+GGG 0.632469 3_3:-69696696 Msa0468160:CDS
GAAACAGTATAATGAGTGGG+TGG 0.642722 3_3:-69696865 Msa0468160:CDS
CTTGGAGGCCAATCCCTCGG+CGG 0.651664 3_3:+69697032 None:intergenic
TGGGAGGAGGAAAAGAGGCA+AGG 0.652268 3_3:-69696677 Msa0468160:CDS
TTAGACCAAGATTATCACCC+TGG 0.654734 3_3:-69696697 Msa0468160:CDS
TCGTGAAGCGCATAAGATGG+AGG 0.656006 3_3:-69696973 Msa0468160:CDS
GTCGACGGGGAATTCATCGG+AGG 0.657587 3_3:+69697394 None:intergenic
ATTCGCCATCACATAAAAGT+GGG 0.657615 3_3:-69695107 Msa0468160:CDS
AGATCCAGGAGACAAGCCAG+AGG 0.658333 3_3:-69692999 Msa0468160:CDS
ACATTGGTGGAGTATACGAT+GGG 0.660404 3_3:-69695847 Msa0468160:intron
TTTCATTGCAGATTTGTGTG+GGG 0.663073 3_3:-69695910 Msa0468160:intron
ATCGACTCCGGCGAGCTCAG+AGG 0.664940 3_3:+69697215 None:intergenic
GATTAAGGAAGATGTTCCGG+AGG 0.668281 3_3:-69697099 Msa0468160:CDS
GGTGAAGGATTTAGCGACGG+TGG 0.677063 3_3:+69697415 None:intergenic
GGAGGTGAAGGATTTAGCGA+CGG 0.690162 3_3:+69697412 None:intergenic
ACCAAGATTATCACCCTGGG+AGG 0.694247 3_3:-69696693 Msa0468160:CDS
GACATTGGTGGAGTATACGA+TGG 0.698114 3_3:-69695848 Msa0468160:CDS
GCGCGGACGAGTCTCAACGA+AGG 0.736916 3_3:-69697248 Msa0468160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAGTAAATAAATATGT+AGG - chr3_3:69692372-69692391 Msa0468160:intron 10.0%
!! AGTTAAAAAAAACTACAATT+TGG + chr3_3:69693395-69693414 None:intergenic 15.0%
!! GTTGCAATTTATATAATATT+TGG - chr3_3:69694011-69694030 Msa0468160:intron 15.0%
!!! TTTCAAAGTATTTATGTATT+TGG - chr3_3:69694168-69694187 Msa0468160:intron 15.0%
!!! CTTTTTTGCATTTTTTTTAT+AGG - chr3_3:69694650-69694669 Msa0468160:intron 15.0%
!! ATTAATCCTGATAAATATAA+AGG - chr3_3:69697432-69697451 Msa0468160:CDS 15.0%
!! TAAATAAATATGTAGGATTG+AGG - chr3_3:69692379-69692398 Msa0468160:intron 20.0%
!! AATGTTTAATCAATATCATG+TGG - chr3_3:69692677-69692696 Msa0468160:intron 20.0%
!!! TTTGTTAGAAAAAAAAGTAC+TGG - chr3_3:69692846-69692865 Msa0468160:intron 20.0%
!! ACTGTATTATCAAGTATATA+AGG + chr3_3:69693342-69693361 None:intergenic 20.0%
!!! TTATGTTCATGTTTTGAAAT+AGG - chr3_3:69693458-69693477 Msa0468160:intron 20.0%
!! ATAAAGAAAAATTTCAAGGA+GGG + chr3_3:69694195-69694214 None:intergenic 20.0%
!! AAGGATAAAGAAAAATTTCA+AGG + chr3_3:69694199-69694218 None:intergenic 20.0%
!!! ATTTTTTTTATAGGCAATGT+AGG - chr3_3:69694659-69694678 Msa0468160:intron 20.0%
!! TTTGTACTTCTTTATTAGAA+TGG + chr3_3:69695717-69695736 None:intergenic 20.0%
!!! AATCTATTCAATTAGTTTTG+TGG + chr3_3:69695882-69695901 None:intergenic 20.0%
!! AAAACTAATTGAATAGATTG+AGG - chr3_3:69695883-69695902 Msa0468160:CDS 20.0%
!! CATAATATTGTGTGATAATA+TGG - chr3_3:69696105-69696124 Msa0468160:intron 20.0%
!!! TAATTTTAGTCAGGAAATAA+TGG + chr3_3:69696167-69696186 None:intergenic 20.0%
!! TCTCAATATCTATTGAATAT+AGG + chr3_3:69696298-69696317 None:intergenic 20.0%
!! AAAGGCAAAAAATCAAATAA+AGG + chr3_3:69696486-69696505 None:intergenic 20.0%
!! ACAATTTATAATGATTCTAC+TGG - chr3_3:69696964-69696983 Msa0468160:CDS 20.0%
!! CAATTTATAATGATTCTACT+GGG - chr3_3:69696965-69696984 Msa0468160:CDS 20.0%
!! ACTAAGAAATAGAATTAAGA+GGG - chr3_3:69697052-69697071 Msa0468160:CDS 20.0%
!!! AAAAAAAAGTATTCTTGTGA+TGG + chr3_3:69697348-69697367 None:intergenic 20.0%
!!! TTTTTTTTTTTTTGCAGTTG+TGG - chr3_3:69697367-69697386 Msa0468160:CDS 20.0%
!!! TTTTTGCCTTTATATTTATC+AGG + chr3_3:69697441-69697460 None:intergenic 20.0%
!! ATTAGTACCAAAAATAACTA+TGG - chr3_3:69697539-69697558 Msa0468160:exon 20.0%
! AAAGTGAAGAGATAAGAATT+GGG + chr3_3:69690829-69690848 None:intergenic 25.0%
!!! TTTTGAAACAGTATAATGAG+TGG - chr3_3:69691475-69691494 Msa0468160:intron 25.0%
!! TTTGAAACAGTATAATGAGT+GGG - chr3_3:69691476-69691495 Msa0468160:intron 25.0%
! TAATAAGGATTTATTGGAAG+AGG - chr3_3:69691506-69691525 Msa0468160:intron 25.0%
!!! GCATTCATAGTTTTTTGATT+TGG - chr3_3:69691581-69691600 Msa0468160:intron 25.0%
!!! GTTTTTTGATTTGGTTTATG+TGG - chr3_3:69691590-69691609 Msa0468160:intron 25.0%
!!! GATTCTTTTTTTACGTTTGT+AGG - chr3_3:69691727-69691746 Msa0468160:intron 25.0%
!! TTTTTACGTTTGTAGGTATT+TGG - chr3_3:69691734-69691753 Msa0468160:intron 25.0%
! TTCTTAGTTCATACTCATTA+TGG - chr3_3:69691860-69691879 Msa0468160:intron 25.0%
!!! TCACAGTTTTTTCTTCTTTT+TGG - chr3_3:69692229-69692248 Msa0468160:intron 25.0%
! ACAAAAATAGGATCATCTAA+TGG + chr3_3:69692300-69692319 None:intergenic 25.0%
!!! TAGATGATCCTATTTTTGTT+TGG - chr3_3:69692301-69692320 Msa0468160:intron 25.0%
! AAATGAAGCCAAACAAAAAT+AGG + chr3_3:69692312-69692331 None:intergenic 25.0%
! CTTGTTAAATCTTTAGACTT+TGG - chr3_3:69692814-69692833 Msa0468160:intron 25.0%
!! TGAATAGTTTTCAGTAAACT+GGG + chr3_3:69692930-69692949 None:intergenic 25.0%
!! TTGAATAGTTTTCAGTAAAC+TGG + chr3_3:69692931-69692950 None:intergenic 25.0%
! TTCCTATAAAGAACAATGAT+TGG - chr3_3:69693208-69693227 Msa0468160:intron 25.0%
! AACCAATCATTGTTCTTTAT+AGG + chr3_3:69693213-69693232 None:intergenic 25.0%
!!! TAAAGAACAATGATTGGTTT+TGG - chr3_3:69693214-69693233 Msa0468160:intron 25.0%
!! TATACTTGATAATACAGTGA+TGG - chr3_3:69693344-69693363 Msa0468160:intron 25.0%
! AAAAAAAACTACAATTTGGC+AGG + chr3_3:69693391-69693410 None:intergenic 25.0%
!!! GTTTTTTTTAACTCATCGAT+AGG - chr3_3:69693402-69693421 Msa0468160:intron 25.0%
! AGCTCAAATTGTATTATACA+AGG - chr3_3:69693487-69693506 Msa0468160:CDS 25.0%
! ATGAACTGGAAAAATGAAAA+TGG + chr3_3:69693612-69693631 None:intergenic 25.0%
!! TTCTTTTATTCGTCCATTTT+TGG - chr3_3:69693765-69693784 Msa0468160:intron 25.0%
!! TGCAATTTAAAATCTACTTG+TGG - chr3_3:69694052-69694071 Msa0468160:intron 25.0%
!! GCAATTTAAAATCTACTTGT+GGG - chr3_3:69694053-69694072 Msa0468160:intron 25.0%
! GATAAAGAAAAATTTCAAGG+AGG + chr3_3:69694196-69694215 None:intergenic 25.0%
! TGAGGAAGATCTATAAAAAA+AGG + chr3_3:69694218-69694237 None:intergenic 25.0%
! CTAACAAAGTTACAAATTTG+AGG + chr3_3:69694236-69694255 None:intergenic 25.0%
! ATGCAAAAAAGCTTAAAGTA+AGG + chr3_3:69694641-69694660 None:intergenic 25.0%
! AGTTCAATTATATCCTTGTT+TGG - chr3_3:69694725-69694744 Msa0468160:intron 25.0%
!! CATTCACATTTTTACTTTGT+AGG - chr3_3:69694794-69694813 Msa0468160:intron 25.0%
! TACATCAGATGATCTATATT+TGG + chr3_3:69694873-69694892 None:intergenic 25.0%
! AAAAATCTGCAAAAAGATTG+AGG + chr3_3:69695104-69695123 None:intergenic 25.0%
!! AACATACCTTTTCAACATAT+GGG + chr3_3:69695393-69695412 None:intergenic 25.0%
! TTAGAATGTTCGTTCTTATT+TGG + chr3_3:69695614-69695633 None:intergenic 25.0%
! AATAAGAACGAACATTCTAA+AGG - chr3_3:69695614-69695633 Msa0468160:intron 25.0%
!!! ATATGCTATTTTTTGTCACT+AGG - chr3_3:69695764-69695783 Msa0468160:intron 25.0%
! TTAAGAGTCAAAATCAACAA+AGG + chr3_3:69696081-69696100 None:intergenic 25.0%
! AATATGGATCCCAAATAAAT+TGG - chr3_3:69696121-69696140 Msa0468160:intron 25.0%
!!! CAGTTATACTAATTTTAGTC+AGG + chr3_3:69696176-69696195 None:intergenic 25.0%
! TAAAATTAGTATAACTGCTC+TGG - chr3_3:69696179-69696198 Msa0468160:intron 25.0%
! CAATATCTATTGAATATAGG+TGG + chr3_3:69696295-69696314 None:intergenic 25.0%
! ATAACATACTTACTATAGCA+TGG - chr3_3:69696370-69696389 Msa0468160:intron 25.0%
! ATGGCAATGCAATTATAATA+TGG - chr3_3:69696389-69696408 Msa0468160:intron 25.0%
! AATGCAATTATAATATGGAC+TGG - chr3_3:69696394-69696413 Msa0468160:intron 25.0%
! TTTCATTGTTTAGACATCAA+AGG + chr3_3:69696504-69696523 None:intergenic 25.0%
! TGATGTCTAAACAATGAAAT+AGG - chr3_3:69696505-69696524 Msa0468160:intron 25.0%
! GATGTCTAAACAATGAAATA+GGG - chr3_3:69696506-69696525 Msa0468160:intron 25.0%
! TTTCATAGTGATGTAGTTAT+AGG + chr3_3:69696571-69696590 None:intergenic 25.0%
! ACATCACTATGAAAATAGAA+TGG - chr3_3:69696577-69696596 Msa0468160:intron 25.0%
! AAAAATGTTACCACAATACT+CGG + chr3_3:69696683-69696702 None:intergenic 25.0%
! CACTAAGAAATAGAATTAAG+AGG - chr3_3:69697051-69697070 Msa0468160:CDS 25.0%
! CTAAGAAATAGAATTAAGAG+GGG - chr3_3:69697053-69697072 Msa0468160:CDS 25.0%
!!! ATTATCCAATCATTGATTTC+AGG + chr3_3:69697315-69697334 None:intergenic 25.0%
!! GCAAATGATTTTGAATGATA+TGG - chr3_3:69697407-69697426 Msa0468160:CDS 25.0%
AAGTGAAGAGATAAGAATTG+GGG + chr3_3:69690828-69690847 None:intergenic 30.0%
GAAAGTGAAGAGATAAGAAT+TGG + chr3_3:69690830-69690849 None:intergenic 30.0%
! GTTTAAGGTTTAAGGGTTTA+GGG + chr3_3:69690852-69690871 None:intergenic 30.0%
!!! CTTCAGATTCTTTGGTTTTA+GGG + chr3_3:69690999-69691018 None:intergenic 30.0%
!!! TCTTCAGATTCTTTGGTTTT+AGG + chr3_3:69691000-69691019 None:intergenic 30.0%
AAGAAGAAGATTGAGGAAAT+GGG - chr3_3:69691186-69691205 Msa0468160:intron 30.0%
GGAAGCTAATAAGGATTTAT+TGG - chr3_3:69691500-69691519 Msa0468160:intron 30.0%
ATTGGAAGAGGAATCTTATA+AGG - chr3_3:69691518-69691537 Msa0468160:intron 30.0%
GAATTGTGAAATAGCTTACT+TGG + chr3_3:69691843-69691862 None:intergenic 30.0%
TGAAAACAGACTAATACCAT+AGG + chr3_3:69691956-69691975 None:intergenic 30.0%
GTTTCGAATTACTGCTATTA+TGG - chr3_3:69691989-69692008 Msa0468160:intron 30.0%
!!! CTATTATGGTTTTATGCACA+CGG - chr3_3:69692003-69692022 Msa0468160:intron 30.0%
!!! TATTATGGTTTTATGCACAC+GGG - chr3_3:69692004-69692023 Msa0468160:intron 30.0%
! TGGAAGAAACTGATTTCATA+TGG - chr3_3:69692058-69692077 Msa0468160:intron 30.0%
! AAGAAACTGATTTCATATGG+CGG - chr3_3:69692061-69692080 Msa0468160:intron 30.0%
!! TACATTTTTCAATTGCTGAC+TGG - chr3_3:69692145-69692164 Msa0468160:intron 30.0%
TAACCGAATTTACCCTTTAA+TGG - chr3_3:69692193-69692212 Msa0468160:intron 30.0%
CTTCCATTAAAGGGTAAATT+CGG + chr3_3:69692199-69692218 None:intergenic 30.0%
AACATGATGCTTCCATTAAA+GGG + chr3_3:69692208-69692227 None:intergenic 30.0%
CAAATACAGTTGTCCAATTA+GGG + chr3_3:69692273-69692292 None:intergenic 30.0%
ACAAATACAGTTGTCCAATT+AGG + chr3_3:69692274-69692293 None:intergenic 30.0%
! TTTTTCATTGCAGATTTGTG+TGG - chr3_3:69692432-69692451 Msa0468160:intron 30.0%
! TTTTCATTGCAGATTTGTGT+GGG - chr3_3:69692433-69692452 Msa0468160:intron 30.0%
TTAAGGGAACACTTAAAAGA+TGG + chr3_3:69692542-69692561 None:intergenic 30.0%
!! TCCCTTAACTTTTTCTGTAT+TGG - chr3_3:69692554-69692573 Msa0468160:intron 30.0%
CCCAATACAGAAAAAGTTAA+GGG + chr3_3:69692558-69692577 None:intergenic 30.0%
!! CCCTTAACTTTTTCTGTATT+GGG - chr3_3:69692555-69692574 Msa0468160:intron 30.0%
ACCCAATACAGAAAAAGTTA+AGG + chr3_3:69692559-69692578 None:intergenic 30.0%
! TGTTCATTTCCTCATTGTTT+TGG - chr3_3:69692578-69692597 Msa0468160:intron 30.0%
ACTTAGCAAGAATATCATTG+TGG + chr3_3:69692633-69692652 None:intergenic 30.0%
TATCATGTGGTGCAATAAAT+TGG - chr3_3:69692690-69692709 Msa0468160:intron 30.0%
ATCATGTGGTGCAATAAATT+GGG - chr3_3:69692691-69692710 Msa0468160:intron 30.0%
CTAAAGATTTAACAAGTCTC+AGG + chr3_3:69692810-69692829 None:intergenic 30.0%
AGAAAATATGCAATAACCCA+TGG + chr3_3:69693019-69693038 None:intergenic 30.0%
TGTTATCACGAGTAACTTAT+AGG - chr3_3:69693077-69693096 Msa0468160:intron 30.0%
! CTTTTATGCAAGTTTTCTTC+TGG - chr3_3:69693152-69693171 Msa0468160:intron 30.0%
TAAGTATTAAGTGACAAGTG+TGG + chr3_3:69693319-69693338 None:intergenic 30.0%
AATGGACGAATAAAAGAAAG+AGG + chr3_3:69693763-69693782 None:intergenic 30.0%
!!! TCCATTTTTGGTACTAAGAA+AGG - chr3_3:69693777-69693796 Msa0468160:intron 30.0%
TTCATCATTTAAGAAGTGAG+GGG + chr3_3:69693844-69693863 None:intergenic 30.0%
GTTCATCATTTAAGAAGTGA+GGG + chr3_3:69693845-69693864 None:intergenic 30.0%
!! GTTACATACTTGACTTGTAT+TGG - chr3_3:69694135-69694154 Msa0468160:intron 30.0%
! ATAGTGGAAAGTTGAAACAA+GGG + chr3_3:69694561-69694580 None:intergenic 30.0%
! TATAGTGGAAAGTTGAAACA+AGG + chr3_3:69694562-69694581 None:intergenic 30.0%
GGTTAAATGGTGAATTATAG+TGG + chr3_3:69694577-69694596 None:intergenic 30.0%
! TTTTTATAGGCAATGTAGGT+AGG - chr3_3:69694663-69694682 Msa0468160:intron 30.0%
CATTACAAGAAAACCACTTA+TGG + chr3_3:69694751-69694770 None:intergenic 30.0%
ATACTAATCCAGATGAATTG+CGG - chr3_3:69695056-69695075 Msa0468160:intron 30.0%
AAAAAGATTGAGGTGGTTTA+GGG + chr3_3:69695094-69695113 None:intergenic 30.0%
ACTCGTTAAAAACAAAAGCA+TGG + chr3_3:69695192-69695211 None:intergenic 30.0%
TATGGGTGATTAGAAAATAG+AGG + chr3_3:69695376-69695395 None:intergenic 30.0%
TAATCACCCATATGTTGAAA+AGG - chr3_3:69695384-69695403 Msa0468160:intron 30.0%
! GAACATACCTTTTCAACATA+TGG + chr3_3:69695394-69695413 None:intergenic 30.0%
! GTTGAAAAGGTATGTTCTTA+TGG - chr3_3:69695397-69695416 Msa0468160:intron 30.0%
TGTAAATAGGATCTTGAATG+GGG + chr3_3:69695574-69695593 None:intergenic 30.0%
GTGTAAATAGGATCTTGAAT+GGG + chr3_3:69695575-69695594 None:intergenic 30.0%
ACATTTATGCAGGTGTAAAT+AGG + chr3_3:69695587-69695606 None:intergenic 30.0%
!! TGATCTCATCAACCTTATTT+TGG - chr3_3:69695819-69695838 Msa0468160:intron 30.0%
AGTTGATCAGTACCAAAATA+AGG + chr3_3:69695834-69695853 None:intergenic 30.0%
! GTGCCATTGTAAAAAATATG+AGG - chr3_3:69695856-69695875 Msa0468160:CDS 30.0%
!!! TGGCCTCATATTTTTTACAA+TGG + chr3_3:69695862-69695881 None:intergenic 30.0%
TGCTTATGATTCAGTCATTA+TGG - chr3_3:69695910-69695929 Msa0468160:intron 30.0%
ATTATGGTAACAATGTTCCT+GGG - chr3_3:69695926-69695945 Msa0468160:intron 30.0%
! TGTAATGGAATTATCAGAGT+GGG + chr3_3:69695998-69696017 None:intergenic 30.0%
! ATGTAATGGAATTATCAGAG+TGG + chr3_3:69695999-69696018 None:intergenic 30.0%
TATATGAGCTAGTCATGTAA+TGG + chr3_3:69696013-69696032 None:intergenic 30.0%
AAAAAGCGGCCAATTTATTT+GGG + chr3_3:69696133-69696152 None:intergenic 30.0%
TAAAAAGCGGCCAATTTATT+TGG + chr3_3:69696134-69696153 None:intergenic 30.0%
TATCTATTGAATATAGGTGG+TGG + chr3_3:69696292-69696311 None:intergenic 30.0%
!! CAATTATAATATGGACTGGT+AGG - chr3_3:69696398-69696417 Msa0468160:intron 30.0%
ACTAAGTAATCTGTACTGTT+AGG - chr3_3:69696436-69696455 Msa0468160:intron 30.0%
GGCAAAAAATCAAATAAAGG+AGG + chr3_3:69696483-69696502 None:intergenic 30.0%
AATAGGGCAATAAGTAACAA+AGG - chr3_3:69696522-69696541 Msa0468160:intron 30.0%
! GCAATAAGTAACAAAGGTAT+TGG - chr3_3:69696528-69696547 Msa0468160:CDS 30.0%
!! AAGTAACAAAGGTATTGGTT+AGG - chr3_3:69696533-69696552 Msa0468160:CDS 30.0%
!! TATTTTATGTCCGAGTATTG+TGG - chr3_3:69696670-69696689 Msa0468160:CDS 30.0%
GTTTCATGACGAATGAAATT+TGG - chr3_3:69696854-69696873 Msa0468160:CDS 30.0%
TGAAACTTAATGATATGCGA+CGG - chr3_3:69696897-69696916 Msa0468160:CDS 30.0%
ATAAATTGTGACGCAAAGTA+TGG + chr3_3:69696953-69696972 None:intergenic 30.0%
TCTTTCCTGAAATCAATGAT+TGG - chr3_3:69697307-69697326 Msa0468160:CDS 30.0%
GGTACTAATGCATTCTTATA+AGG + chr3_3:69697528-69697547 None:intergenic 30.0%
!! GAACTCACCATAGTTATTTT+TGG + chr3_3:69697549-69697568 None:intergenic 30.0%
! GGTTTAAGGTTTAAGGGTTT+AGG + chr3_3:69690853-69690872 None:intergenic 35.0%
!!! CTTTTAGAATGTTGAACCCT+AGG - chr3_3:69691157-69691176 Msa0468160:intron 35.0%
TCTTCTTCTTCCTATACCTA+GGG + chr3_3:69691176-69691195 None:intergenic 35.0%
ATCTTCTTCTTCCTATACCT+AGG + chr3_3:69691177-69691196 None:intergenic 35.0%
GTATAGGAAGAAGAAGATTG+AGG - chr3_3:69691179-69691198 Msa0468160:intron 35.0%
GAAGAAGAAGATTGAGGAAA+TGG - chr3_3:69691185-69691204 Msa0468160:intron 35.0%
TGAGATTAAGGAAGATGTTC+CGG - chr3_3:69691242-69691261 Msa0468160:intron 35.0%
AGGTTGGAGGATATTGAAAA+TGG - chr3_3:69691405-69691424 Msa0468160:intron 35.0%
! TGAAACTGATGATGTGTGTT+TGG - chr3_3:69691437-69691456 Msa0468160:intron 35.0%
TGTGTGTTTGGATAGGTATA+AGG - chr3_3:69691449-69691468 Msa0468160:intron 35.0%
TGAGAGAGTAAAATTGTCCT+GGG - chr3_3:69691761-69691780 Msa0468160:intron 35.0%
!!! GGGCTAACTACTTTTTTGAA+TGG - chr3_3:69691782-69691801 Msa0468160:intron 35.0%
! AGTCTGTTTTCATATTCACC+TGG - chr3_3:69691964-69691983 Msa0468160:intron 35.0%
!! TTCTATCATTTTGTGCTGCT+TGG - chr3_3:69692038-69692057 Msa0468160:intron 35.0%
! AGAAACTGATTTCATATGGC+GGG - chr3_3:69692062-69692081 Msa0468160:intron 35.0%
CAACATGATGCTTCCATTAA+AGG + chr3_3:69692209-69692228 None:intergenic 35.0%
TCAGTTATGATGTCCCTAAT+TGG - chr3_3:69692257-69692276 Msa0468160:intron 35.0%
TTTCATTGCAGATTTGTGTG+GGG - chr3_3:69692434-69692453 Msa0468160:intron 35.0%
ACAACTTTGCATCTCTATCA+AGG - chr3_3:69692463-69692482 Msa0468160:intron 35.0%
CAACTTTGCATCTCTATCAA+GGG - chr3_3:69692464-69692483 Msa0468160:intron 35.0%
AACTTTGCATCTCTATCAAG+GGG - chr3_3:69692465-69692484 Msa0468160:intron 35.0%
ACACTTAAAAGATGGACAGA+GGG + chr3_3:69692534-69692553 None:intergenic 35.0%
AACACTTAAAAGATGGACAG+AGG + chr3_3:69692535-69692554 None:intergenic 35.0%
!!! TACTTGTTTTGTTTCTGCCA+TGG + chr3_3:69692773-69692792 None:intergenic 35.0%
! ACTGTCTCTTTTGTATCATG+TGG - chr3_3:69692901-69692920 Msa0468160:intron 35.0%
TCTTTCTTTGATCCTTGACT+AGG - chr3_3:69692967-69692986 Msa0468160:CDS 35.0%
AAAACAATGTCTCCTAGTCA+AGG + chr3_3:69692982-69693001 None:intergenic 35.0%
TTTCTCTTTATATGCTGCCA+TGG - chr3_3:69692999-69693018 Msa0468160:CDS 35.0%
TTCTCTTTATATGCTGCCAT+GGG - chr3_3:69693000-69693019 Msa0468160:CDS 35.0%
ATTCGCCATCACATAAAAGT+GGG - chr3_3:69693237-69693256 Msa0468160:intron 35.0%
!! TCATACCCACTTTTATGTGA+TGG + chr3_3:69693245-69693264 None:intergenic 35.0%
GACCGTCATTGTTGAAATTA+CGG - chr3_3:69693263-69693282 Msa0468160:intron 35.0%
CACCGTAATTTCAACAATGA+CGG + chr3_3:69693268-69693287 None:intergenic 35.0%
! AGCCTTATCCATCAATATGT+TGG - chr3_3:69693694-69693713 Msa0468160:intron 35.0%
! GACCAACATATTGATGGATA+AGG + chr3_3:69693699-69693718 None:intergenic 35.0%
GCCTTTCTTAGTACCAAAAA+TGG + chr3_3:69693781-69693800 None:intergenic 35.0%
!! TTTTTGGTACTAAGAAAGGC+AGG - chr3_3:69693781-69693800 Msa0468160:intron 35.0%
! TTTTGGTACTAAGAAAGGCA+GGG - chr3_3:69693782-69693801 Msa0468160:intron 35.0%
TCATCATTTAAGAAGTGAGG+GGG + chr3_3:69693843-69693862 None:intergenic 35.0%
GGTTCATCATTTAAGAAGTG+AGG + chr3_3:69693846-69693865 None:intergenic 35.0%
ACTAGCAACTACAAAGTGAA+AGG + chr3_3:69693906-69693925 None:intergenic 35.0%
AACTAGTTGTAGTCTGTCAT+TGG + chr3_3:69693970-69693989 None:intergenic 35.0%
AGTATGTAACTTCAACTCAC+TGG + chr3_3:69694125-69694144 None:intergenic 35.0%
!!! CTTGACTTGTATTGGTTTTG+AGG - chr3_3:69694143-69694162 Msa0468160:intron 35.0%
TCACCATTTAACCATGTCAT+TGG - chr3_3:69694584-69694603 Msa0468160:intron 35.0%
CAACCAATGACATGGTTAAA+TGG + chr3_3:69694590-69694609 None:intergenic 35.0%
!! TATGAAGCGCTGTTTATAGA+AGG + chr3_3:69694920-69694939 None:intergenic 35.0%
TACTAATCCAGATGAATTGC+GGG - chr3_3:69695057-69695076 Msa0468160:intron 35.0%
CAAAAAGATTGAGGTGGTTT+AGG + chr3_3:69695095-69695114 None:intergenic 35.0%
AATCTGCAAAAAGATTGAGG+TGG + chr3_3:69695101-69695120 None:intergenic 35.0%
TTGATGTCTATTGTTCCTTG+TGG + chr3_3:69695427-69695446 None:intergenic 35.0%
GGTGTAAATAGGATCTTGAA+TGG + chr3_3:69695576-69695595 None:intergenic 35.0%
! ATTTGGCTTCACATTTATGC+AGG + chr3_3:69695597-69695616 None:intergenic 35.0%
TTGGATCTTGCACAAACAAT+GGG - chr3_3:69695675-69695694 Msa0468160:intron 35.0%
CATTATGGTAACAATGTTCC+TGG - chr3_3:69695925-69695944 Msa0468160:intron 35.0%
ACACAACCCTTTATCTTCTA+TGG + chr3_3:69695961-69695980 None:intergenic 35.0%
! GTAATGGAATTATCAGAGTG+GGG + chr3_3:69695997-69696016 None:intergenic 35.0%
GAGTCAAAATCAACAAAGGA+CGG + chr3_3:69696077-69696096 None:intergenic 35.0%
TGGACAAAGCTAGTAAAAAG+CGG + chr3_3:69696147-69696166 None:intergenic 35.0%
TTCAACATTCACCGAACAAA+GGG + chr3_3:69696322-69696341 None:intergenic 35.0%
TTTCAACATTCACCGAACAA+AGG + chr3_3:69696323-69696342 None:intergenic 35.0%
! AAGTTCTTGGTTAGTCCTAT+TGG - chr3_3:69696611-69696630 Msa0468160:intron 35.0%
TTTCTCGTAGAACTTTGTCT+TGG - chr3_3:69696702-69696721 Msa0468160:intron 35.0%
GAAACTTAATGATATGCGAC+GGG - chr3_3:69696898-69696917 Msa0468160:CDS 35.0%
GGAAAGTAACACAATGAAAG+AGG + chr3_3:69696932-69696951 None:intergenic 35.0%
CCTAAATAATCCCAGTAACA+GGG + chr3_3:69696993-69697012 None:intergenic 35.0%
CCTGTTACTGGGATTATTTA+GGG - chr3_3:69696991-69697010 Msa0468160:CDS 35.0%
TTCTTTGGTACATCTGAACA+GGG + chr3_3:69697017-69697036 None:intergenic 35.0%
TTTCTTTGGTACATCTGAAC+AGG + chr3_3:69697018-69697037 None:intergenic 35.0%
AGATGTACCAAAGAAAGTAG+AGG - chr3_3:69697022-69697041 Msa0468160:CDS 35.0%
GATGTACCAAAGAAAGTAGA+GGG - chr3_3:69697023-69697042 Msa0468160:CDS 35.0%
ATGTACCAAAGAAAGTAGAG+GGG - chr3_3:69697024-69697043 Msa0468160:CDS 35.0%
TAAGAGGGGTAGTAATGATA+AGG - chr3_3:69697067-69697086 Msa0468160:CDS 35.0%
AAGAGGGGTAGTAATGATAA+GGG - chr3_3:69697068-69697087 Msa0468160:CDS 35.0%
TAGAAAGGAACCTAACAGAA+TGG - chr3_3:69697122-69697141 Msa0468160:CDS 35.0%
AGAAAGGAACCTAACAGAAT+GGG - chr3_3:69697123-69697142 Msa0468160:CDS 35.0%
! GGAGAGGGTTTAAGGTTTAA+GGG + chr3_3:69690859-69690878 None:intergenic 40.0%
TGCTTCGTCTTCAGATTCTT+TGG + chr3_3:69691007-69691026 None:intergenic 40.0%
! CTAAAAGCTTCAATCGACTC+CGG + chr3_3:69691144-69691163 None:intergenic 40.0%
GAATGTTGAACCCTAGGTAT+AGG - chr3_3:69691163-69691182 Msa0468160:intron 40.0%
! CATTTAGTCTTCAACTCCTC+CGG + chr3_3:69691264-69691283 None:intergenic 40.0%
GGAGGAGTTGAAGACTAAAT+GGG - chr3_3:69691263-69691282 Msa0468160:intron 40.0%
TATTCGTGAAGCGCATAAGA+TGG - chr3_3:69691368-69691387 Msa0468160:intron 40.0%
! CTGATGATGTGTGTTTGGAT+AGG - chr3_3:69691442-69691461 Msa0468160:intron 40.0%
GAAACAGTATAATGAGTGGG+TGG - chr3_3:69691479-69691498 Msa0468160:intron 40.0%
TTAGACCAAGATTATCACCC+TGG - chr3_3:69691647-69691666 Msa0468160:intron 40.0%
TAGACCAAGATTATCACCCT+GGG - chr3_3:69691648-69691667 Msa0468160:intron 40.0%
GAAAAGAGGCAAGGATTACA+AGG - chr3_3:69691676-69691695 Msa0468160:intron 40.0%
GTGAGAGAGTAAAATTGTCC+TGG - chr3_3:69691760-69691779 Msa0468160:intron 40.0%
GAGAGAGTAAAATTGTCCTG+GGG - chr3_3:69691762-69691781 Msa0468160:intron 40.0%
TCAAAAAAGTAGTTAGCCCC+AGG + chr3_3:69691781-69691800 None:intergenic 40.0%
GAGCTACCATTCTATTATCC+TGG - chr3_3:69691817-69691836 Msa0468160:intron 40.0%
ACTTGGCCAGGATAATAGAA+TGG + chr3_3:69691826-69691845 None:intergenic 40.0%
AGCAGTAATTCGAAACAACC+AGG + chr3_3:69691985-69692004 None:intergenic 40.0%
ACATTGGTGGAGTATACGAT+GGG - chr3_3:69692497-69692516 Msa0468160:intron 40.0%
TAAAAGATGGACAGAGGGAT+TGG + chr3_3:69692529-69692548 None:intergenic 40.0%
!!! TTCCTCATTGTTTTGGATGC+TGG - chr3_3:69692585-69692604 Msa0468160:intron 40.0%
! GTAATGAAGCATTTCAGTGC+TGG + chr3_3:69692742-69692761 None:intergenic 40.0%
CTTCATTACATCCAAAGCCA+TGG - chr3_3:69692753-69692772 Msa0468160:intron 40.0%
!!! TTTTGTTTCTGCCATGGCTT+TGG + chr3_3:69692767-69692786 None:intergenic 40.0%
TGTTTACAGACTAGAGCTAC+AGG - chr3_3:69692870-69692889 Msa0468160:intron 40.0%
GTTTACAGACTAGAGCTACA+GGG - chr3_3:69692871-69692890 Msa0468160:intron 40.0%
! GTCTCTTTTGTATCATGTGG+TGG - chr3_3:69692904-69692923 Msa0468160:intron 40.0%
!! ATAACAGTATGAAGTGCTGC+TGG + chr3_3:69693063-69693082 None:intergenic 40.0%
CATCTACTGTAACGTGTTCT+AGG - chr3_3:69693181-69693200 Msa0468160:intron 40.0%
! TACTGTAACGTGTTCTAGGT+GGG - chr3_3:69693185-69693204 Msa0468160:intron 40.0%
GATTCGCCATCACATAAAAG+TGG - chr3_3:69693236-69693255 Msa0468160:intron 40.0%
AATTTGGCAGGTAACAGTAC+GGG + chr3_3:69693379-69693398 None:intergenic 40.0%
CAATTTGGCAGGTAACAGTA+CGG + chr3_3:69693380-69693399 None:intergenic 40.0%
CTCATCGATAGGAAACTAGT+TGG - chr3_3:69693413-69693432 Msa0468160:intron 40.0%
TGAAAATGGACACCTGATGT+GGG + chr3_3:69693598-69693617 None:intergenic 40.0%
ATGAAAATGGACACCTGATG+TGG + chr3_3:69693599-69693618 None:intergenic 40.0%
TTGAGATTGGGTCTTCAGTT+GGG + chr3_3:69693675-69693694 None:intergenic 40.0%
GATGGATAAGGCTTGAGATT+GGG + chr3_3:69693687-69693706 None:intergenic 40.0%
! TGATGGATAAGGCTTGAGAT+TGG + chr3_3:69693688-69693707 None:intergenic 40.0%
CACTCAGACCAACATATTGA+TGG + chr3_3:69693705-69693724 None:intergenic 40.0%
TTTGGTACTAAGAAAGGCAG+GGG - chr3_3:69693783-69693802 Msa0468160:intron 40.0%
ATGATGAACCCCCTCAAATT+TGG - chr3_3:69693856-69693875 Msa0468160:intron 40.0%
TGCAATGTCCAAATTTGAGG+GGG + chr3_3:69693867-69693886 None:intergenic 40.0%
GTGCAATGTCCAAATTTGAG+GGG + chr3_3:69693868-69693887 None:intergenic 40.0%
GGTGCAATGTCCAAATTTGA+GGG + chr3_3:69693869-69693888 None:intergenic 40.0%
TGGTGCAATGTCCAAATTTG+AGG + chr3_3:69693870-69693889 None:intergenic 40.0%
CAACTACAAAGTGAAAGGAG+AGG + chr3_3:69693901-69693920 None:intergenic 40.0%
GAACCAGGTTAGGTTATGTA+GGG - chr3_3:69694080-69694099 Msa0468160:intron 40.0%
TTTCCCTACATAACCTAACC+TGG + chr3_3:69694086-69694105 None:intergenic 40.0%
TAACTTCAACTCACTGGCAA+TGG + chr3_3:69694119-69694138 None:intergenic 40.0%
CAATCTTCATGCATTAGCGA+GGG + chr3_3:69694385-69694404 None:intergenic 40.0%
ACAATCTTCATGCATTAGCG+AGG + chr3_3:69694386-69694405 None:intergenic 40.0%
! TATCCTTGTTTGGCCATAAG+TGG - chr3_3:69694735-69694754 Msa0468160:intron 40.0%
AAACCACTTATGGCCAAACA+AGG + chr3_3:69694741-69694760 None:intergenic 40.0%
TCCACAAAACGAAGTTCGAT+CGG + chr3_3:69694849-69694868 None:intergenic 40.0%
TCTTCGTCACGGTGAAATAT+TGG + chr3_3:69695037-69695056 None:intergenic 40.0%
!! CTGGATTAGTATCTTCGTCA+CGG + chr3_3:69695048-69695067 None:intergenic 40.0%
TCAAGACATATCTGACAGCA+TGG + chr3_3:69695233-69695252 None:intergenic 40.0%
TAAAATTTGCAGCGTGACTG+TGG - chr3_3:69695301-69695320 Msa0468160:intron 40.0%
!! GGATCTTTTCTAGGAATAGG+AGG + chr3_3:69695331-69695350 None:intergenic 40.0%
!! CCTGGATCTTTTCTAGGAAT+AGG + chr3_3:69695334-69695353 None:intergenic 40.0%
CCTATTCCTAGAAAAGATCC+AGG - chr3_3:69695331-69695350 Msa0468160:intron 40.0%
! TTGTCTCCTGGATCTTTTCT+AGG + chr3_3:69695340-69695359 None:intergenic 40.0%
GAAAATAGAGGTTCTTCCTC+TGG + chr3_3:69695364-69695383 None:intergenic 40.0%
TGTTCTTATGGACTTCCACA+AGG - chr3_3:69695409-69695428 Msa0468160:intron 40.0%
GGAACAATAGACATCAATGC+TGG - chr3_3:69695430-69695449 Msa0468160:intron 40.0%
!! TAGACATCAATGCTGGTTCT+AGG - chr3_3:69695437-69695456 Msa0468160:intron 40.0%
!! TCAATGCTGGTTCTAGGTTA+TGG - chr3_3:69695443-69695462 Msa0468160:intron 40.0%
TCTCTTATACAAGCAGACAG+TGG - chr3_3:69695472-69695491 Msa0468160:intron 40.0%
! TGTCTGTGTTGATGTTCAGT+TGG - chr3_3:69695656-69695675 Msa0468160:intron 40.0%
GTTGGATCTTGCACAAACAA+TGG - chr3_3:69695674-69695693 Msa0468160:intron 40.0%
AACCCTTTATCTTCTATGGC+CGG + chr3_3:69695957-69695976 None:intergenic 40.0%
!! CAGATGCTGAATTAGCTTTG+TGG - chr3_3:69696043-69696062 Msa0468160:intron 40.0%
GATATTGAGAGCCCTTTGTT+CGG - chr3_3:69696308-69696327 Msa0468160:intron 40.0%
GTAGTTATAGGATGCCAAAG+TGG + chr3_3:69696559-69696578 None:intergenic 40.0%
GGTTGTCTTTCACAAGTTCT+TGG - chr3_3:69696598-69696617 Msa0468160:intron 40.0%
AACTTTGTCTTGGAGATGCA+AGG - chr3_3:69696712-69696731 Msa0468160:intron 40.0%
ACTTTGTCTTGGAGATGCAA+GGG - chr3_3:69696713-69696732 Msa0468160:intron 40.0%
GTAAACTGGAACACAGCAAA+AGG + chr3_3:69696832-69696851 None:intergenic 40.0%
! TTTGCTGTGTTCCAGTTTAC+TGG - chr3_3:69696832-69696851 Msa0468160:CDS 40.0%
TCGTCATGAAACCAGTAAAC+TGG + chr3_3:69696846-69696865 None:intergenic 40.0%
!! ACGAATGAAATTTGGTGTGC+TGG - chr3_3:69696862-69696881 Msa0468160:CDS 40.0%
CCCTGTTACTGGGATTATTT+AGG - chr3_3:69696990-69697009 Msa0468160:CDS 40.0%
CCCTAAATAATCCCAGTAAC+AGG + chr3_3:69696994-69697013 None:intergenic 40.0%
CATGATCACACAATTGAGGT+GGG - chr3_3:69697091-69697110 Msa0468160:CDS 40.0%
ATGATCACACAATTGAGGTG+GGG - chr3_3:69697092-69697111 Msa0468160:CDS 40.0%
GAAAGGAACCTAACAGAATG+GGG - chr3_3:69697124-69697143 Msa0468160:CDS 40.0%
ATGCACCCTTCATGATTGAT+TGG + chr3_3:69697159-69697178 None:intergenic 40.0%
! ATGAAGGGTGCATAGATATG+AGG - chr3_3:69697166-69697185 Msa0468160:CDS 40.0%
! TGAAGGGTGCATAGATATGA+GGG - chr3_3:69697167-69697186 Msa0468160:CDS 40.0%
ACGGAATCTGTTGGAATTCT+AGG - chr3_3:69697210-69697229 Msa0468160:CDS 40.0%
! GTTGGAATTCTAGGAAGCTT+AGG - chr3_3:69697219-69697238 Msa0468160:CDS 40.0%
AGGCAAAAAGCTATCAGACT+TGG - chr3_3:69697452-69697471 Msa0468160:CDS 40.0%
! GGGAGAGGGTTTAAGGTTTA+AGG + chr3_3:69690860-69690879 None:intergenic 45.0%
GGAATAAGGGAGAGGGTTTA+AGG + chr3_3:69690867-69690886 None:intergenic 45.0%
GAAACCTTCCTCCAAACCTT+CGG - chr3_3:69690973-69690992 Msa0468160:intron 45.0%
!!! TTCTTTGGTTTTAGGGCCGA+AGG + chr3_3:69690992-69691011 None:intergenic 45.0%
GATTGAGGAAATGGGAGTGA+CGG - chr3_3:69691194-69691213 Msa0468160:intron 45.0%
!! AGTGACGGAAGAGGAGTATT+TGG - chr3_3:69691209-69691228 Msa0468160:intron 45.0%
! GGCGAAGCAGTTTGAGATTA+AGG - chr3_3:69691230-69691249 Msa0468160:intron 45.0%
GATTAAGGAAGATGTTCCGG+AGG - chr3_3:69691245-69691264 Msa0468160:intron 45.0%
CGGAGGAGTTGAAGACTAAA+TGG - chr3_3:69691262-69691281 Msa0468160:intron 45.0%
GAGTTGAAGACTAAATGGGC+AGG - chr3_3:69691267-69691286 Msa0468160:intron 45.0%
TGAGTGGGTGGAAGCTAATA+AGG - chr3_3:69691491-69691510 Msa0468160:intron 45.0%
AGAGGCAAGGATTACAAGGA+TGG - chr3_3:69691680-69691699 Msa0468160:intron 45.0%
CAAGGATTACAAGGATGGCA+TGG - chr3_3:69691685-69691704 Msa0468160:intron 45.0%
GATTACAAGGATGGCATGGT+AGG - chr3_3:69691689-69691708 Msa0468160:intron 45.0%
GTGAAATAGCTTACTTGGCC+AGG + chr3_3:69691838-69691857 None:intergenic 45.0%
CGCGCTCTTAAGATTTCCTA+TGG - chr3_3:69691937-69691956 Msa0468160:intron 45.0%
! TGATTTCATATGGCGGGACT+AGG - chr3_3:69692068-69692087 Msa0468160:intron 45.0%
!! GGACTAGGCTAGTCTTCATT+AGG - chr3_3:69692083-69692102 Msa0468160:intron 45.0%
ATTGCAGATTTGTGTGGGGA+AGG - chr3_3:69692438-69692457 Msa0468160:intron 45.0%
!! CAAGGGGCATTTGTTGACAT+TGG - chr3_3:69692481-69692500 Msa0468160:intron 45.0%
GACATTGGTGGAGTATACGA+TGG - chr3_3:69692496-69692515 Msa0468160:intron 45.0%
CTCCAGCATCCAAAACAATG+AGG + chr3_3:69692590-69692609 None:intergenic 45.0%
AGTCTCAGGTGTGTTTCTCT+AGG + chr3_3:69692796-69692815 None:intergenic 45.0%
! CTACTGTAACGTGTTCTAGG+TGG - chr3_3:69693184-69693203 Msa0468160:intron 45.0%
! CAGGTAACAGTACGGGTTAA+AGG + chr3_3:69693372-69693391 None:intergenic 45.0%
TCTCTCTAGTGTGCAACAAC+TGG - chr3_3:69693519-69693538 Msa0468160:CDS 45.0%
CTCTCTAGTGTGCAACAACT+GGG - chr3_3:69693520-69693539 Msa0468160:CDS 45.0%
TCTCTAGTGTGCAACAACTG+GGG - chr3_3:69693521-69693540 Msa0468160:CDS 45.0%
GGGGATACCAACAGAAACTA+GGG + chr3_3:69693578-69693597 None:intergenic 45.0%
TGGGGATACCAACAGAAACT+AGG + chr3_3:69693579-69693598 None:intergenic 45.0%
GAAAATGGACACCTGATGTG+GGG + chr3_3:69693597-69693616 None:intergenic 45.0%
ATTGCTCACCCCATTCCAAA+GGG - chr3_3:69693630-69693649 Msa0468160:intron 45.0%
CTTGAGATTGGGTCTTCAGT+TGG + chr3_3:69693676-69693695 None:intergenic 45.0%
TTGGTCTGAGTGTCAAACCT+GGG - chr3_3:69693713-69693732 Msa0468160:intron 45.0%
GTAGTTGCTAGTTAGTACGC+TGG - chr3_3:69693914-69693933 Msa0468160:intron 45.0%
CGAACCAGGTTAGGTTATGT+AGG - chr3_3:69694079-69694098 Msa0468160:intron 45.0%
AAGGGTAGACCTTTCTTCAG+TGG + chr3_3:69694543-69694562 None:intergenic 45.0%
GTCACATGCAACCAATGACA+TGG + chr3_3:69694598-69694617 None:intergenic 45.0%
CAATGTAGGTAGGACACACA+AGG - chr3_3:69694673-69694692 Msa0468160:intron 45.0%
CCACAAAACGAAGTTCGATC+GGG + chr3_3:69694848-69694867 None:intergenic 45.0%
CGTCACGGTGAAATATTGGT+GGG + chr3_3:69695033-69695052 None:intergenic 45.0%
TCGTCACGGTGAAATATTGG+TGG + chr3_3:69695034-69695053 None:intergenic 45.0%
GATTGAGGTGGTTTAGGGAA+AGG + chr3_3:69695089-69695108 None:intergenic 45.0%
CTATGCACACACAAGGGATT+TGG + chr3_3:69695500-69695519 None:intergenic 45.0%
CAAATCCCTTGTGTGTGCAT+AGG - chr3_3:69695498-69695517 Msa0468160:intron 45.0%
AACAGCCTATGCACACACAA+GGG + chr3_3:69695506-69695525 None:intergenic 45.0%
AAACAGCCTATGCACACACA+AGG + chr3_3:69695507-69695526 None:intergenic 45.0%
CATAACCACACGAAGGATGA+GGG + chr3_3:69695549-69695568 None:intergenic 45.0%
ACAGACAGACACAGGTTCAT+AGG + chr3_3:69695643-69695662 None:intergenic 45.0%
ACATCAACACAGACAGACAC+AGG + chr3_3:69695651-69695670 None:intergenic 45.0%
ACTCCGGCCATAGAAGATAA+AGG - chr3_3:69695951-69695970 Msa0468160:intron 45.0%
CTCCGGCCATAGAAGATAAA+GGG - chr3_3:69695952-69695971 Msa0468160:intron 45.0%
AATTATCAGAGTGGGGCAGT+CGG + chr3_3:69695990-69696009 None:intergenic 45.0%
!! AGGTATTGGTTAGGCCACTT+TGG - chr3_3:69696542-69696561 Msa0468160:intron 45.0%
CGCTTGTAACAGATGCCAAT+AGG + chr3_3:69696629-69696648 None:intergenic 45.0%
!! GGTGGGCTAATGTGAAATCA+GGG - chr3_3:69696734-69696753 Msa0468160:intron 45.0%
AAATCAGGGTGACCCTGTTA+TGG - chr3_3:69696748-69696767 Msa0468160:intron 45.0%
AATCAGGGTGACCCTGTTAT+GGG - chr3_3:69696749-69696768 Msa0468160:intron 45.0%
GACTGCTTGATCCCATAACA+GGG + chr3_3:69696763-69696782 None:intergenic 45.0%
TGACTGCTTGATCCCATAAC+AGG + chr3_3:69696764-69696783 None:intergenic 45.0%
GCAATCCCCTCTACTTTCTT+TGG + chr3_3:69697032-69697051 None:intergenic 45.0%
AGGGCATGATCACACAATTG+AGG - chr3_3:69697087-69697106 Msa0468160:CDS 45.0%
GCATGATCACACAATTGAGG+TGG - chr3_3:69697090-69697109 Msa0468160:CDS 45.0%
TGGCTGCCAATCAATCATGA+AGG - chr3_3:69697150-69697169 Msa0468160:CDS 45.0%
GGCTGCCAATCAATCATGAA+GGG - chr3_3:69697151-69697170 Msa0468160:CDS 45.0%
CATAGATATGAGGGAGGGAA+TGG - chr3_3:69697176-69697195 Msa0468160:CDS 45.0%
TAGAATGCTTCACTTCCGTC+AGG + chr3_3:69697245-69697264 None:intergenic 45.0%
TGACGGTGGAATAAGGGAGA+GGG + chr3_3:69690874-69690893 None:intergenic 50.0%
ATGACGGTGGAATAAGGGAG+AGG + chr3_3:69690875-69690894 None:intergenic 50.0%
! GGTGGATGACGGTGGAATAA+GGG + chr3_3:69690880-69690899 None:intergenic 50.0%
! TGGTGGATGACGGTGGAATA+AGG + chr3_3:69690881-69690900 None:intergenic 50.0%
GGAGGTGAAGGATTTAGCGA+CGG + chr3_3:69690935-69690954 None:intergenic 50.0%
TTCGTCGACGGGGAATTCAT+CGG + chr3_3:69690956-69690975 None:intergenic 50.0%
TTGGAGGAAGGTTTCGTCGA+CGG + chr3_3:69690968-69690987 None:intergenic 50.0%
!!! TTTTAGGGCCGAAGGTTTGG+AGG + chr3_3:69690984-69691003 None:intergenic 50.0%
!!! TGGTTTTAGGGCCGAAGGTT+TGG + chr3_3:69690987-69691006 None:intergenic 50.0%
GGAGTGAGAATCTCTTCCCA+TGG + chr3_3:69691063-69691082 None:intergenic 50.0%
GGAACCAACTTCACCACCAA+CGG + chr3_3:69691294-69691313 None:intergenic 50.0%
TCGTGAAGCGCATAAGATGG+AGG - chr3_3:69691371-69691390 Msa0468160:intron 50.0%
ACCAAGATTATCACCCTGGG+AGG - chr3_3:69691651-69691670 Msa0468160:intron 50.0%
TCCTCCCAGGGTGATAATCT+TGG + chr3_3:69691655-69691674 None:intergenic 50.0%
AAGATTATCACCCTGGGAGG+AGG - chr3_3:69691654-69691673 Msa0468160:intron 50.0%
! GGGGCATTTGTTGACATTGG+TGG - chr3_3:69692484-69692503 Msa0468160:intron 50.0%
! AGTGCCTCTGATGGGTAAGT+GGG + chr3_3:69693553-69693572 None:intergenic 50.0%
GCACTGTCCCTAGTTTCTGT+TGG - chr3_3:69693568-69693587 Msa0468160:intron 50.0%
TCTGTTGGTATCCCCACATC+AGG - chr3_3:69693583-69693602 Msa0468160:intron 50.0%
GAATGGGGTGAGCAATGAAC+TGG + chr3_3:69693626-69693645 None:intergenic 50.0%
CATTGCTCACCCCATTCCAA+AGG - chr3_3:69693629-69693648 Msa0468160:intron 50.0%
TCACCCCATTCCAAAGGGAA+GGG - chr3_3:69693635-69693654 Msa0468160:intron 50.0%
ACATATCACCCCCTTCCCTT+TGG + chr3_3:69693648-69693667 None:intergenic 50.0%
! GTTGGTCTGAGTGTCAAACC+TGG - chr3_3:69693712-69693731 Msa0468160:intron 50.0%
! TGAAAGGAGAGGTGCAAGTG+TGG + chr3_3:69693890-69693909 None:intergenic 50.0%
AGTTTGAACCCCCTGATTCC+AGG - chr3_3:69694506-69694525 Msa0468160:intron 50.0%
AGCGAGATCCTTATCGCTTC+CGG - chr3_3:69694820-69694839 Msa0468160:intron 50.0%
AACGAAGTTCGATCGGGAAC+CGG + chr3_3:69694842-69694861 None:intergenic 50.0%
! CCCGATCGAACTTCGTTTTG+TGG - chr3_3:69694845-69694864 Msa0468160:intron 50.0%
GTGCAAACCCGCAATTCATC+TGG + chr3_3:69695067-69695086 None:intergenic 50.0%
ATTTGCAGCGTGACTGTGGA+AGG - chr3_3:69695305-69695324 Msa0468160:intron 50.0%
CCATAACCACACGAAGGATG+AGG + chr3_3:69695550-69695569 None:intergenic 50.0%
CCTCATCCTTCGTGTGGTTA+TGG - chr3_3:69695547-69695566 Msa0468160:intron 50.0%
ACAATGTTCCTGGGCAACTC+CGG - chr3_3:69695935-69695954 Msa0468160:intron 50.0%
TTGTCTTGGAGATGCAAGGG+TGG - chr3_3:69696716-69696735 Msa0468160:intron 50.0%
TGTCTTGGAGATGCAAGGGT+GGG - chr3_3:69696717-69696736 Msa0468160:intron 50.0%
!! GGGTGGGCTAATGTGAAATC+AGG - chr3_3:69696733-69696752 Msa0468160:intron 50.0%
AGGTGGGGAGTCTGTTAGAA+AGG - chr3_3:69697107-69697126 Msa0468160:CDS 50.0%
AGGAACCTAACAGAATGGGG+AGG - chr3_3:69697127-69697146 Msa0468160:CDS 50.0%
AACCTAACAGAATGGGGAGG+TGG - chr3_3:69697130-69697149 Msa0468160:CDS 50.0%
AGGGTGCATAGATATGAGGG+AGG - chr3_3:69697170-69697189 Msa0468160:CDS 50.0%
GGGTGCATAGATATGAGGGA+GGG - chr3_3:69697171-69697190 Msa0468160:CDS 50.0%
GGGAATGGAAGCGAAAGAGA+CGG - chr3_3:69697191-69697210 Msa0468160:CDS 50.0%
GCGAAAGAGACGGAATCTGT+TGG - chr3_3:69697201-69697220 Msa0468160:CDS 50.0%
TCTAGGAAGCTTAGGCCTGA+CGG - chr3_3:69697227-69697246 Msa0468160:CDS 50.0%
!! GGAGTAGAGGTGGTGGATGA+CGG + chr3_3:69690891-69690910 None:intergenic 55.0%
GATTTAGCGACGGTGGTGAG+AGG + chr3_3:69690925-69690944 None:intergenic 55.0%
GGTGAAGGATTTAGCGACGG+TGG + chr3_3:69690932-69690951 None:intergenic 55.0%
GGGGAATTCATCGGAGGTGA+AGG + chr3_3:69690947-69690966 None:intergenic 55.0%
TGGAGGAAGGTTTCGTCGAC+GGG + chr3_3:69690967-69690986 None:intergenic 55.0%
AACCGCGTTCGATCCAGTTG+CGG + chr3_3:69691035-69691054 None:intergenic 55.0%
CAACTGGATCGAACGCGGTT+GGG - chr3_3:69691035-69691054 Msa0468160:intron 55.0%
AGAAGTTCCTCTGAGCTCGC+CGG - chr3_3:69691122-69691141 Msa0468160:intron 55.0%
! GGAAATGGGAGTGACGGAAG+AGG - chr3_3:69691200-69691219 Msa0468160:intron 55.0%
GACTAAATGGGCAGGACCGT+TGG - chr3_3:69691275-69691294 Msa0468160:intron 55.0%
TAAATGGGCAGGACCGTTGG+TGG - chr3_3:69691278-69691297 Msa0468160:intron 55.0%
!! AGGACCGTTGGTGGTGAAGT+TGG - chr3_3:69691287-69691306 Msa0468160:intron 55.0%
AGATGGAGGCGAAGAGAGTG+AGG - chr3_3:69691385-69691404 Msa0468160:intron 55.0%
! TGCCTCTTTTCCTCCTCCCA+GGG + chr3_3:69691667-69691686 None:intergenic 55.0%
! TTGCCTCTTTTCCTCCTCCC+AGG + chr3_3:69691668-69691687 None:intergenic 55.0%
TGGGAGGAGGAAAAGAGGCA+AGG - chr3_3:69691667-69691686 Msa0468160:intron 55.0%
AGCTCCCACTTACCCATCAG+AGG - chr3_3:69693546-69693565 Msa0468160:intron 55.0%
! CAGTGCCTCTGATGGGTAAG+TGG + chr3_3:69693554-69693573 None:intergenic 55.0%
CTAGGGACAGTGCCTCTGAT+GGG + chr3_3:69693561-69693580 None:intergenic 55.0%
ACTAGGGACAGTGCCTCTGA+TGG + chr3_3:69693562-69693581 None:intergenic 55.0%
CTCACCCCATTCCAAAGGGA+AGG - chr3_3:69693634-69693653 Msa0468160:intron 55.0%
CACCCCATTCCAAAGGGAAG+GGG - chr3_3:69693636-69693655 Msa0468160:intron 55.0%
ACCCCATTCCAAAGGGAAGG+GGG - chr3_3:69693637-69693656 Msa0468160:intron 55.0%
!! ACCCCCTTCCCTTTGGAATG+GGG + chr3_3:69693641-69693660 None:intergenic 55.0%
!! CACCCCCTTCCCTTTGGAAT+GGG + chr3_3:69693642-69693661 None:intergenic 55.0%
! TCACCCCCTTCCCTTTGGAA+TGG + chr3_3:69693643-69693662 None:intergenic 55.0%
!! GAAAGAGGCATCAACCACCG+AGG + chr3_3:69693748-69693767 None:intergenic 55.0%
GGTACTAAGAAAGGCAGGGG+CGG - chr3_3:69693786-69693805 Msa0468160:intron 55.0%
CTACTTGTGGGAGTCGAACC+AGG - chr3_3:69694065-69694084 Msa0468160:intron 55.0%
TGTGGGAGTCGAACCAGGTT+AGG - chr3_3:69694070-69694089 Msa0468160:intron 55.0%
TAGCCAGGACCTGGAATCAG+GGG + chr3_3:69694518-69694537 None:intergenic 55.0%
GTAGCCAGGACCTGGAATCA+GGG + chr3_3:69694519-69694538 None:intergenic 55.0%
CTTTCTTCAGTGGCGTAGCC+AGG + chr3_3:69694533-69694552 None:intergenic 55.0%
CTGGCTACGCCACTGAAGAA+AGG - chr3_3:69694531-69694550 Msa0468160:intron 55.0%
ATCGGGAACCGGAAGCGATA+AGG + chr3_3:69694831-69694850 None:intergenic 55.0%
AGATCCAGGAGACAAGCCAG+AGG - chr3_3:69695345-69695364 Msa0468160:intron 55.0%
! TCTTCCTCTGGCTTGTCTCC+TGG + chr3_3:69695352-69695371 None:intergenic 55.0%
CGAAGGATGAGGGTGGAAAC+AGG + chr3_3:69695539-69695558 None:intergenic 55.0%
TTCCACCCTCATCCTTCGTG+TGG - chr3_3:69695541-69695560 Msa0468160:intron 55.0%
AACCACACGAAGGATGAGGG+TGG + chr3_3:69695546-69695565 None:intergenic 55.0%
TGGGGTCCATAACCACACGA+AGG + chr3_3:69695556-69695575 None:intergenic 55.0%
TCTACTGGGCACCCTGTTAC+TGG - chr3_3:69696979-69696998 Msa0468160:CDS 55.0%
CTACTGGGCACCCTGTTACT+GGG - chr3_3:69696980-69696999 Msa0468160:CDS 55.0%
AGCCACCTCCCCATTCTGTT+AGG + chr3_3:69697135-69697154 None:intergenic 55.0%
!! GTAGAGGTGGTGGATGACGG+TGG + chr3_3:69690888-69690907 None:intergenic 60.0%
TTGCGGTGGAGTAGAGGTGG+TGG + chr3_3:69690898-69690917 None:intergenic 60.0%
GGTTTGCGGTGGAGTAGAGG+TGG + chr3_3:69690901-69690920 None:intergenic 60.0%
! GGTGGTTTGCGGTGGAGTAG+AGG + chr3_3:69690904-69690923 None:intergenic 60.0%
! TGGTGAGAGGTGGTTTGCGG+TGG + chr3_3:69690912-69690931 None:intergenic 60.0%
CGGTGGTGAGAGGTGGTTTG+CGG + chr3_3:69690915-69690934 None:intergenic 60.0%
TTAGCGACGGTGGTGAGAGG+TGG + chr3_3:69690922-69690941 None:intergenic 60.0%
GTCGACGGGGAATTCATCGG+AGG + chr3_3:69690953-69690972 None:intergenic 60.0%
GGAGGAAGGTTTCGTCGACG+GGG + chr3_3:69690966-69690985 None:intergenic 60.0%
AGGGCCGAAGGTTTGGAGGA+AGG + chr3_3:69690980-69690999 None:intergenic 60.0%
GCAACTGGATCGAACGCGGT+TGG - chr3_3:69691034-69691053 Msa0468160:intron 60.0%
CTCCTGAAGCCGAATTCGCG+CGG - chr3_3:69691079-69691098 Msa0468160:intron 60.0%
GAGACTCGTCCGCGCGAATT+CGG + chr3_3:69691091-69691110 None:intergenic 60.0%
! TGGTGAAGTTGGTTCCGCCG+AGG - chr3_3:69691298-69691317 Msa0468160:intron 60.0%
! GGTGAAGTTGGTTCCGCCGA+GGG - chr3_3:69691299-69691318 Msa0468160:intron 60.0%
! AGTTGGTTCCGCCGAGGGAT+TGG - chr3_3:69691304-69691323 Msa0468160:intron 60.0%
CCTCTTGGAGGCCAATCCCT+CGG + chr3_3:69691318-69691337 None:intergenic 60.0%
!! CGAGGGATTGGCCTCCAAGA+GGG - chr3_3:69691316-69691335 Msa0468160:intron 60.0%
!! GGATTGGCCTCCAAGAGGGT+GGG - chr3_3:69691320-69691339 Msa0468160:intron 60.0%
GGAGGCGAAGAGAGTGAGGT+TGG - chr3_3:69691389-69691408 Msa0468160:intron 60.0%
GGCGAAGAGAGTGAGGTTGG+AGG - chr3_3:69691392-69691411 Msa0468160:intron 60.0%
CACCCTGGGAGGAGGAAAAG+AGG - chr3_3:69691662-69691681 Msa0468160:intron 60.0%
GTGTCAAACCTGGGCACCTC+TGG - chr3_3:69693722-69693741 Msa0468160:intron 60.0%
GAACACCCAGACCCCTACGT+GGG + chr3_3:69693813-69693832 None:intergenic 60.0%
TGAACACCCAGACCCCTACG+TGG + chr3_3:69693814-69693833 None:intergenic 60.0%
AACCCCCTGATTCCAGGTCC+TGG - chr3_3:69694512-69694531 Msa0468160:intron 60.0%
AGCCAGGACCTGGAATCAGG+GGG + chr3_3:69694517-69694536 None:intergenic 60.0%
CGTAGCCAGGACCTGGAATC+AGG + chr3_3:69694520-69694539 None:intergenic 60.0%
TTCTATGGCCGGAGTTGCCC+AGG + chr3_3:69695946-69695965 None:intergenic 60.0%
ACGAAGCACGTCGCCGCAAC+TGG - chr3_3:69691019-69691038 Msa0468160:intron 65.0%
CGCCGCAACTGGATCGAACG+CGG - chr3_3:69691030-69691049 Msa0468160:intron 65.0%
TCGAACGCGGTTGGGCTCCA+TGG - chr3_3:69691043-69691062 Msa0468160:intron 65.0%
CGAACGCGGTTGGGCTCCAT+GGG - chr3_3:69691044-69691063 Msa0468160:intron 65.0%
GTCCGCGCGAATTCGGCTTC+AGG + chr3_3:69691084-69691103 None:intergenic 65.0%
GCGCGGACGAGTCTCAACGA+AGG - chr3_3:69691096-69691115 Msa0468160:intron 65.0%
! ATCGACTCCGGCGAGCTCAG+AGG + chr3_3:69691132-69691151 None:intergenic 65.0%
CTTGGAGGCCAATCCCTCGG+CGG + chr3_3:69691315-69691334 None:intergenic 65.0%
!! CCGAGGGATTGGCCTCCAAG+AGG - chr3_3:69691315-69691334 Msa0468160:intron 65.0%
!! GGGATTGGCCTCCAAGAGGG+TGG - chr3_3:69691319-69691338 Msa0468160:intron 65.0%
TTGGCCTCCAAGAGGGTGGG+AGG - chr3_3:69691323-69691342 Msa0468160:intron 65.0%
TCCACCTCCCACCCTCTTGG+AGG + chr3_3:69691330-69691349 None:intergenic 65.0%
CGATCCACCTCCCACCCTCT+TGG + chr3_3:69691333-69691352 None:intergenic 65.0%
AACCTGGGCACCTCTGGCCT+CGG - chr3_3:69693728-69693747 Msa0468160:intron 65.0%
GCATCAACCACCGAGGCCAG+AGG + chr3_3:69693741-69693760 None:intergenic 65.0%
TCAGTGGCGTAGCCAGGACC+TGG + chr3_3:69694527-69694546 None:intergenic 65.0%
GCCTCCAAGAGGGTGGGAGG+TGG - chr3_3:69691326-69691345 Msa0468160:intron 70.0%
GCGGACCCACGTAGGGGTCT+GGG - chr3_3:69693805-69693824 Msa0468160:intron 70.0%
!! CACCGAGGCCAGAGGTGCCC+AGG + chr3_3:69693733-69693752 None:intergenic 75.0%
CTGGGCACCTCTGGCCTCGG+TGG - chr3_3:69693731-69693750 Msa0468160:intron 75.0%
AGGCAGGGGCGGACCCACGT+AGG - chr3_3:69693797-69693816 Msa0468160:intron 75.0%
GGCAGGGGCGGACCCACGTA+GGG - chr3_3:69693798-69693817 Msa0468160:intron 75.0%
GCAGGGGCGGACCCACGTAG+GGG - chr3_3:69693799-69693818 Msa0468160:intron 75.0%
GGCGGACCCACGTAGGGGTC+TGG - chr3_3:69693804-69693823 Msa0468160:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 69690788 69697578 69690788 ID=Msa0468160;Name=Msa0468160
chr3_3 mRNA 69690788 69697578 69690788 ID=Msa0468160-mRNA-1;Parent=Msa0468160;Name=Msa0468160-mRNA-1;_AED=0.05;_eAED=0.05;_QI=26|1|0.88|1|0.62|0.88|9|0|467
chr3_3 exon 69690788 69690982 69690788 ID=Msa0468160-mRNA-1:exon:16555;Parent=Msa0468160-mRNA-1
chr3_3 exon 69692961 69693053 69692961 ID=Msa0468160-mRNA-1:exon:16554;Parent=Msa0468160-mRNA-1
chr3_3 exon 69693288 69693354 69693288 ID=Msa0468160-mRNA-1:exon:16553;Parent=Msa0468160-mRNA-1
chr3_3 exon 69693477 69693550 69693477 ID=Msa0468160-mRNA-1:exon:16552;Parent=Msa0468160-mRNA-1
chr3_3 exon 69695082 69695163 69695082 ID=Msa0468160-mRNA-1:exon:16551;Parent=Msa0468160-mRNA-1
chr3_3 exon 69695848 69695921 69695848 ID=Msa0468160-mRNA-1:exon:16550;Parent=Msa0468160-mRNA-1
chr3_3 exon 69696523 69696552 69696523 ID=Msa0468160-mRNA-1:exon:16549;Parent=Msa0468160-mRNA-1
chr3_3 exon 69696660 69696719 69696660 ID=Msa0468160-mRNA-1:exon:16548;Parent=Msa0468160-mRNA-1
chr3_3 exon 69696827 69697578 69696827 ID=Msa0468160-mRNA-1:exon:16547;Parent=Msa0468160-mRNA-1
chr3_3 five_prime_UTR 69697553 69697578 69697553 ID=Msa0468160-mRNA-1:five_prime_utr;Parent=Msa0468160-mRNA-1
chr3_3 CDS 69696827 69697552 69696827 ID=Msa0468160-mRNA-1:cds;Parent=Msa0468160-mRNA-1
chr3_3 CDS 69696660 69696719 69696660 ID=Msa0468160-mRNA-1:cds;Parent=Msa0468160-mRNA-1
chr3_3 CDS 69696523 69696552 69696523 ID=Msa0468160-mRNA-1:cds;Parent=Msa0468160-mRNA-1
chr3_3 CDS 69695848 69695921 69695848 ID=Msa0468160-mRNA-1:cds;Parent=Msa0468160-mRNA-1
chr3_3 CDS 69695082 69695163 69695082 ID=Msa0468160-mRNA-1:cds;Parent=Msa0468160-mRNA-1
chr3_3 CDS 69693477 69693550 69693477 ID=Msa0468160-mRNA-1:cds;Parent=Msa0468160-mRNA-1
chr3_3 CDS 69693288 69693354 69693288 ID=Msa0468160-mRNA-1:cds;Parent=Msa0468160-mRNA-1
chr3_3 CDS 69692961 69693053 69692961 ID=Msa0468160-mRNA-1:cds;Parent=Msa0468160-mRNA-1
chr3_3 CDS 69690788 69690982 69690788 ID=Msa0468160-mRNA-1:cds;Parent=Msa0468160-mRNA-1
Gene Sequence

>Msa0468160

ATGCAAGTCTTCCCCAATTCTTATCTCTTCACTTTCCCTAAACCCTTAAACCTTAAACCCTCTCCCTTATTCCACCGTCATCCACCACCTCTACTCCACCGCAAACCACCTCTCACCACCGTCGCTAAATCCTTCACCTCCGATGAATTCCCCGTCGACGAAACCTTCCTCCAAACCTTCGGCCCTAAAACCAAAGAATCTGAAGACGAAGCACGTCGCCGCAACTGGATCGAACGCGGTTGGGCTCCATGGGAAGAGATTCTCACTCCTGAAGCCGAATTCGCGCGGACGAGTCTCAACGAAGGTGAAGAAGTTCCTCTGAGCTCGCCGGAGTCGATTGAAGCTTTTAGAATGTTGAACCCTAGGTATAGGAAGAAGAAGATTGAGGAAATGGGAGTGACGGAAGAGGAGTATTTGGCGAAGCAGTTTGAGATTAAGGAAGATGTTCCGGAGGAGTTGAAGACTAAATGGGCAGGACCGTTGGTGGTGAAGTTGGTTCCGCCGAGGGATTGGCCTCCAAGAGGGTGGGAGGTGGATCGAGAAGAGCTTGCGTTTATTCGTGAAGCGCATAAGATGGAGGCGAAGAGAGTGAGGTTGGAGGATATTGAAAATGGTGTTAGAACTGAAACTGATGATGTGTGTTTGGATAGGTATAAGGTGTTTTTGAAACAGTATAATGAGTGGGTGGAAGCTAATAAGGATTTATTGGAAGAGGAATCTTATAAGTTAGACCAAGATTATCACCCTGGGAGGAGGAAAAGAGGCAAGGATTACAAGGATGGCATGTACGAGCTACCATTCTATTATCCTGGCCAAATTTGTGTGGGGAAGGTGACAACTTTGCATCTCTATCAAGGGGCATTTGTTGACATTGGTGGAGTATACGATGGGTGGGTTCCTATAAAGAACAATGATTGGTTTTGGATTCGCCATCACATAAAAGTGGGTATGACCGTCATTGTTGAAATTACGGCAAAGCGAGATCCTTATCGCTTCCGGTTCCCGATCGAACTTCGTTTTGTGGATCCAAATATAGATCATCTGATCTTTAACAGATTTGACTTCCCACCAATATTTCACCGTGACGAAGATACTAATCCAGATGAATTGCGGCGTGACTGTGGAAGGCCTCCTATTCCTAGAAAAGATCCAGGAGACAAGCCAGAGGAAGAACCTCTATTTTCTAATCACCCATATGTTGAAAAGTTGTGGCAGATTAATGTAGCTGAGCAAATGATTTTGAATGATATGGATATTAATCCTGATAAATATAAAGGCAAAAAGCTATCAGACTTGGTTGACGAAGATGATTTTGATGAAGAAAAATCAGTTCAGCAGACAAAAGTTCCTTATAAGAATGCATTAGTACCAAAAATAACTATGGTGAGTTCTATTCTTATT
Protein sequence

>Msa0468160

MQVFPNSYLFTFPKPLNLKPSPLFHRHPPPLLHRKPPLTTVAKSFTSDEFPVDETFLQTFGPKTKESEDEARRRNWIERGWAPWEEILTPEAEFARTSLNEGEEVPLSSPESIEAFRMLNPRYRKKKIEEMGVTEEEYLAKQFEIKEDVPEELKTKWAGPLVVKLVPPRDWPPRGWEVDREELAFIREAHKMEAKRVRLEDIENGVRTETDDVCLDRYKVFLKQYNEWVEANKDLLEEESYKLDQDYHPGRRKRGKDYKDGMYELPFYYPGQICVGKVTTLHLYQGAFVDIGGVYDGWVPIKNNDWFWIRHHIKVGMTVIVEITAKRDPYRFRFPIELRFVDPNIDHLIFNRFDFPPIFHRDEDTNPDELRRDCGRPPIPRKDPGDKPEEEPLFSNHPYVEKLWQINVAEQMILNDMDINPDKYKGKKLSDLVDEDDFDEEKSVQQTKVPYKNALVPKITMVSSILI