AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1387200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1387200 MtrunA17_Chr8g0364251 85.859 594 19 6 1 529 1 594 0.0 978
Msa1387200 MtrunA17_Chr6g0466611 27.700 426 241 14 80 487 142 518 1.03e-34 139
Msa1387200 MtrunA17_Chr6g0449741 28.293 410 235 13 80 474 249 614 9.37e-32 129
Msa1387200 MtrunA17_Chr4g0076491 28.398 412 234 14 80 474 287 654 1.14e-29 123
Msa1387200 MtrunA17_Chr1g0176041 25.527 474 256 18 55 489 121 536 3.29e-29 121
Msa1387200 MtrunA17_Chr3g0145781 26.852 432 237 16 61 465 119 498 1.71e-28 119
Msa1387200 MtrunA17_Chr7g0236831 26.464 461 282 17 80 498 163 608 3.39e-27 116
Msa1387200 MtrunA17_Chr3g0107851 27.500 400 225 13 102 487 139 487 7.95e-26 111
Msa1387200 MtrunA17_Chr3g0121351 25.328 458 250 17 80 504 145 543 6.06e-24 105
Msa1387200 MtrunA17_Chr2g0330401 25.610 410 220 16 102 489 118 464 2.75e-23 103
Msa1387200 MtrunA17_Chr2g0310581 25.658 456 280 15 34 484 10 411 3.61e-23 102
Msa1387200 MtrunA17_Chr8g0354761 25.067 375 219 13 103 467 31 353 1.73e-22 100
Msa1387200 MtrunA17_Chr4g0063551 25.899 417 213 16 102 484 162 516 3.74e-21 97.4
Msa1387200 MtrunA17_Chr2g0309551 25.546 458 261 16 80 494 109 529 6.58e-20 93.2
Msa1387200 MtrunA17_Chr1g0192021 31.217 189 111 3 76 254 22 201 7.19e-15 77.4
Msa1387200 MtrunA17_Chr2g0307471 26.630 184 111 4 80 253 91 260 1.55e-14 76.3
Msa1387200 MtrunA17_Chr2g0307471 38.710 93 54 2 374 463 339 431 2.24e-13 72.8
Msa1387200 MtrunA17_Chr2g0300291 34.532 139 87 3 354 488 368 506 3.79e-14 75.5
Msa1387200 MtrunA17_Chr2g0300291 28.421 190 119 6 73 253 128 309 2.15e-11 66.6
Msa1387200 MtrunA17_Chr3g0098121 36.134 119 72 3 374 488 398 516 1.30e-13 73.6
Msa1387200 MtrunA17_Chr3g0098121 30.890 191 106 9 72 253 146 319 8.43e-12 67.8
Msa1387200 MtrunA17_Chr6g0483491 38.182 110 61 3 375 479 253 360 1.42e-13 72.8
Msa1387200 MtrunA17_Chr6g0483491 29.609 179 101 5 80 249 10 172 3.82e-12 68.6
Msa1387200 MtrunA17_Chr7g0236841 38.182 110 61 3 375 479 253 360 1.77e-13 72.4
Msa1387200 MtrunA17_Chr7g0236841 29.609 179 101 5 80 249 10 172 1.83e-12 69.3
Msa1387200 MtrunA17_Chr2g0301281 26.961 204 128 5 78 271 39 231 2.31e-13 72.8
Msa1387200 MtrunA17_Chr2g0301281 40.260 77 45 1 392 467 380 456 3.18e-11 65.9
Msa1387200 MtrunA17_Chr4g0029191 27.419 186 114 5 78 253 42 216 5.57e-13 71.6
Msa1387200 MtrunA17_Chr4g0029191 28.082 146 91 2 336 467 314 459 1.08e-11 67.4
Msa1387200 MtrunA17_Chr7g0247221 33.846 130 75 4 372 495 379 503 6.83e-13 70.9
Msa1387200 MtrunA17_Chr7g0247181 33.846 130 75 4 372 495 376 500 7.15e-13 70.9
Msa1387200 MtrunA17_Chr7g0247191 33.846 130 75 4 372 495 386 510 7.24e-13 70.9
Msa1387200 MtrunA17_Chr7g0271121 36.522 115 71 2 374 486 354 468 1.75e-12 70.1
Msa1387200 MtrunA17_Chr6g0449911 33.140 172 107 5 79 249 164 328 2.03e-12 69.7
Msa1387200 MtrunA17_Chr5g0409981 35.514 107 64 2 389 490 371 477 4.70e-12 68.6
Msa1387200 MtrunA17_Chr4g0062301 34.586 133 81 5 374 502 346 476 9.38e-12 67.4
Msa1387200 MtrunA17_Chr4g0062301 27.811 169 109 5 91 254 108 268 9.89e-11 64.3
Msa1387200 MtrunA17_Chr1g0193491 35.385 130 77 4 368 495 360 484 1.21e-11 67.4
Msa1387200 MtrunA17_Chr4g0039471 26.111 180 122 3 76 253 219 389 3.84e-11 65.1
Msa1387200 MtrunA17_Chr3g0095031 37.634 93 57 1 395 486 358 450 6.87e-11 64.7
Msa1387200 MtrunA17_Chr5g0442191 33.043 115 75 2 374 486 327 441 9.15e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1387200 AT1G59990.1 54.635 507 157 11 69 512 70 566 8.09e-177 511
Msa1387200 AT1G59990.2 50.346 578 209 13 1 512 1 566 3.85e-176 508
Msa1387200 AT4G09730.1 26.950 423 246 15 81 487 114 489 4.23e-32 130
Msa1387200 AT5G60990.1 26.747 415 235 13 80 479 10 370 9.69e-29 119
Msa1387200 AT2G40700.1 26.211 454 255 15 68 467 21 448 2.85e-27 116
Msa1387200 AT2G33730.1 27.650 434 253 14 65 480 297 687 1.21e-26 114
Msa1387200 AT3G18600.1 26.884 398 222 13 78 463 88 428 5.42e-24 106
Msa1387200 AT2G42520.2 25.173 433 229 17 80 480 160 529 1.15e-22 102
Msa1387200 AT2G42520.1 25.173 433 229 17 80 480 160 529 1.15e-22 102
Msa1387200 AT2G42520.3 25.173 433 229 17 80 480 160 529 1.15e-22 102
Msa1387200 AT1G16280.1 26.526 426 245 16 80 495 59 426 2.39e-22 100
Msa1387200 AT3G22330.1 24.256 437 259 16 63 486 88 465 1.31e-21 99.0
Msa1387200 AT5G14610.5 25.542 415 231 13 79 477 169 521 7.51e-21 96.7
Msa1387200 AT5G14610.6 25.542 415 231 13 79 477 161 513 9.75e-21 96.3
Msa1387200 AT5G14610.2 25.542 415 231 13 79 477 161 513 9.94e-21 96.3
Msa1387200 AT3G58570.1 23.953 430 232 16 80 477 147 513 1.74e-20 95.5
Msa1387200 AT3G58510.1 24.711 433 229 16 80 480 152 519 2.63e-20 95.1
Msa1387200 AT3G58510.3 24.711 433 229 16 80 480 152 519 2.63e-20 95.1
Msa1387200 AT3G58510.2 24.711 433 229 16 80 480 152 519 2.63e-20 95.1
Msa1387200 AT1G12770.2 23.973 438 290 15 80 493 111 529 4.27e-20 94.0
Msa1387200 AT1G12770.1 23.973 438 290 15 80 493 111 529 4.27e-20 94.0
Msa1387200 AT5G08610.1 25.641 390 230 14 92 467 395 738 2.61e-19 92.4
Msa1387200 AT3G16840.2 24.356 427 259 16 80 463 192 597 3.88e-19 91.7
Msa1387200 AT3G16840.1 24.590 427 258 17 80 463 191 596 4.39e-19 91.7
Msa1387200 AT4G34910.1 34.239 184 105 4 80 254 47 223 2.15e-18 89.0
Msa1387200 AT5G05450.1 25.253 396 220 15 95 467 34 376 1.22e-17 86.7
Msa1387200 AT5G63120.2 32.836 134 83 3 374 500 412 545 8.59e-15 77.8
Msa1387200 AT1G31970.1 36.667 150 78 6 373 513 367 508 2.09e-14 76.3
Msa1387200 AT1G55150.1 31.169 154 89 5 350 489 318 468 5.92e-14 74.7
Msa1387200 AT1G55150.2 31.169 154 89 5 350 489 343 493 6.58e-14 74.7
Msa1387200 AT4G00660.1 34.646 127 78 3 372 495 368 492 7.00e-13 71.2
Msa1387200 AT4G00660.2 34.646 127 78 3 372 495 368 492 7.00e-13 71.2
Msa1387200 AT2G45810.1 35.455 110 68 2 372 478 391 500 1.05e-12 70.9
Msa1387200 AT4G16630.1 29.000 200 109 8 65 248 148 330 1.51e-12 70.9
Msa1387200 AT4G16630.1 34.783 115 70 3 374 484 414 527 4.22e-12 69.3
Msa1387200 AT5G65900.1 31.008 129 82 4 371 495 399 524 2.99e-12 69.7
Msa1387200 AT3G61240.2 34.545 110 69 2 372 478 361 470 4.29e-12 68.9
Msa1387200 AT3G61240.1 34.545 110 69 2 372 478 361 470 4.29e-12 68.9
Msa1387200 AT5G08620.1 28.774 212 125 8 53 253 61 257 6.09e-12 68.6
Msa1387200 AT5G14610.4 23.958 384 214 13 79 446 169 490 2.21e-11 66.6
Msa1387200 AT5G26742.1 36.522 115 71 2 374 486 353 467 2.89e-11 66.6
Msa1387200 AT5G26742.2 36.522 115 71 2 374 486 353 467 2.90e-11 66.6
Msa1387200 AT3G06480.1 44.872 78 42 1 401 477 710 787 4.75e-11 66.2
Msa1387200 AT5G26742.3 36.522 115 71 2 374 486 260 374 4.98e-11 65.9
Msa1387200 AT3G22310.2 32.174 115 76 2 374 486 363 477 5.75e-11 65.5
Msa1387200 AT3G22310.1 32.174 115 76 2 374 486 363 477 5.85e-11 65.5

Find 161 sgRNAs with CRISPR-Local

Find 668 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCAGTCTCAGTAATTTA+AGG 0.067787 tig0020882:-100429 None:intergenic
TGACCCTTGCCTTTGAATAC+TGG 0.196947 tig0020882:+100207 Msa1387200:three_prime_UTR
CAGTGGCTTTCTTCTTAAAT+TGG 0.213499 tig0020882:-99815 None:intergenic
TTCAGCTTCGTTATTAATAT+TGG 0.230748 tig0020882:-93331 None:intergenic
TTTATTATATATTCACCTTA+TGG 0.255618 tig0020882:-100111 None:intergenic
AAATCGGAAGATTTGGATAA+TGG 0.257182 tig0020882:+97015 Msa1387200:CDS
ATTTGTATGGAGTTGTATCC+TGG 0.295369 tig0020882:-100493 None:intergenic
TCAGGCGGATTACTTTATTC+TGG 0.310873 tig0020882:-93137 None:intergenic
GTGAAGATATTGGGCTATGC+TGG 0.320318 tig0020882:+97096 Msa1387200:intron
CACTTCCTGTTGACAATACT+TGG 0.322662 tig0020882:+100293 Msa1387200:three_prime_UTR
CAGTTTAAAATCGGAAGATT+TGG 0.325357 tig0020882:+97008 Msa1387200:CDS
GAGAGAAGAAGAAGAATTGA+TGG 0.327665 tig0020882:-91517 None:intergenic
AAATGTCTCTCATGTTATTC+AGG 0.337663 tig0020882:+97245 Msa1387200:CDS
TGGACCAGGGATGGCCAATT+CGG 0.344742 tig0020882:+92865 Msa1387200:intron
AAGAATTGATGGTAGCAAAT+AGG 0.357540 tig0020882:-91506 None:intergenic
AGCTAGAGGGAACTTTAATT+AGG 0.370534 tig0020882:-99965 None:intergenic
TATATAGGTGTCTTTGGAAC+CGG 0.375551 tig0020882:-100833 None:intergenic
GTCTTTGGAACCGGGCTATT+AGG 0.379584 tig0020882:-100824 None:intergenic
CAATACACCCTCTCTCGTTC+AGG 0.382589 tig0020882:+91784 Msa1387200:CDS
ATGATATCAGGTTCCCGAAT+TGG 0.387726 tig0020882:-92879 None:intergenic
CACAAGTGAAAGAGCTCATA+AGG 0.389324 tig0020882:+96974 Msa1387200:CDS
TTGAAGTAAAACTCATACTT+TGG 0.390300 tig0020882:+99849 Msa1387200:three_prime_UTR
GTAGATGCTGTTCGTCGTGC+AGG 0.390681 tig0020882:+98959 Msa1387200:CDS
TAGACATAAATTTCACCTCT+TGG 0.392192 tig0020882:+100149 Msa1387200:three_prime_UTR
GGACCAGGGATGGCCAATTC+GGG 0.395111 tig0020882:+92866 Msa1387200:intron
CCTGATGCTGAGTGGGTTAG+TGG 0.398187 tig0020882:+93489 Msa1387200:CDS
CACTACCTGTTTCCCACAAA+TGG 0.406579 tig0020882:-92690 None:intergenic
TGCAGCCATTTGTGGGAAAC+AGG 0.410751 tig0020882:+92685 Msa1387200:CDS
GACCCTTGCCTTTGAATACT+GGG 0.411462 tig0020882:+100208 Msa1387200:three_prime_UTR
TGCTGGTAACTAGTCCGATT+TGG 0.414486 tig0020882:-98910 None:intergenic
CAGCAGACACAACCCTTTGT+TGG 0.417019 tig0020882:+91641 Msa1387200:intron
AAGCACGAGCAGAACTTTCC+TGG 0.423259 tig0020882:-92579 None:intergenic
TTCACCTCTTGGATGACATC+AGG 0.428040 tig0020882:+100160 Msa1387200:three_prime_UTR
TTAGTTGATTTCTACGACAA+AGG 0.431692 tig0020882:+97174 Msa1387200:CDS
TCTATACCATCTGTGTTGTC+AGG 0.435526 tig0020882:+92422 Msa1387200:CDS
TTTCCAGATTGAAGCAAAGA+TGG 0.439295 tig0020882:+96932 Msa1387200:intron
TGAATAACATGAGAGACATT+TGG 0.442425 tig0020882:-97243 None:intergenic
TCGTCTGACATGGCTTCAAT+TGG 0.443242 tig0020882:-93282 None:intergenic
AGAGGGTTCATTTCACCTAC+TGG 0.444022 tig0020882:-100057 None:intergenic
GTTCGTCGTGCAGGGGAACT+CGG 0.444099 tig0020882:+98968 Msa1387200:CDS
CTGGGTTTGCTTTATATCGT+GGG 0.446385 tig0020882:-100474 None:intergenic
TACAAGCTCTCTGTTGGATT+CGG 0.447095 tig0020882:-98939 None:intergenic
CCACTAACCCACTCAGCATC+AGG 0.455201 tig0020882:-93489 None:intergenic
TGTGAATCACAGTTTAAAAT+CGG 0.456195 tig0020882:+96999 Msa1387200:CDS
ATTGAAATCTTCTGATGAAA+CGG 0.462725 tig0020882:-91669 None:intergenic
TGCAGGAGACCGCATTTAGC+AGG 0.463069 tig0020882:+99234 Msa1387200:intron
ATCGACCAAGTATTGTCAAC+AGG 0.464489 tig0020882:-100298 None:intergenic
CGCTGTAAGACTCTCTTCAA+TGG 0.464885 tig0020882:-99782 None:intergenic
TTTACAAAACATCAGTAACT+TGG 0.467784 tig0020882:-99991 None:intergenic
AGTCCTTAAATTACTGAGAC+TGG 0.468283 tig0020882:+100426 Msa1387200:three_prime_UTR
GTTAGTGCTGCAGCCATTTG+TGG 0.471920 tig0020882:+92677 Msa1387200:CDS
CAAGTATTGTCAACAGGAAG+TGG 0.474712 tig0020882:-100292 None:intergenic
AGAGAGAAGAAGAAGACAAA+GGG 0.477821 tig0020882:-91568 None:intergenic
CCTGGGTTTGCTTTATATCG+TGG 0.478444 tig0020882:-100475 None:intergenic
TTGCCGAGGATAACGTTTCG+TGG 0.478904 tig0020882:+91708 Msa1387200:CDS
AACGTTTCGTGGAGTTCACT+TGG 0.481595 tig0020882:+91719 Msa1387200:CDS
GAAGCTGTGGTGAAGATATT+GGG 0.484895 tig0020882:+97087 Msa1387200:intron
ACAGCTAGAGCTGGCCAAAT+CGG 0.486615 tig0020882:+98896 Msa1387200:CDS
GTTTCATCAGAAGATTTCAA+TGG 0.487226 tig0020882:+91671 Msa1387200:CDS
AGCATCTACAAGCTCTCTGT+TGG 0.491017 tig0020882:-98945 None:intergenic
GGTCCTCTATTCTTCTTGAA+AGG 0.491894 tig0020882:-100265 None:intergenic
AATTGTGTGAGCAGGTAGTT+AGG 0.493726 tig0020882:+92615 Msa1387200:intron
TATTAGAGAGAGCTCGAGAA+AGG 0.494225 tig0020882:-91754 None:intergenic
GAATTGCACGTTGGATGAGC+GGG 0.497408 tig0020882:+97143 Msa1387200:CDS
TAGATGCTGTTCGTCGTGCA+GGG 0.499759 tig0020882:+98960 Msa1387200:CDS
AATCCTTTCAAGAAGAATAG+AGG 0.499760 tig0020882:+100262 Msa1387200:three_prime_UTR
GGGTACAGAGGAATATTCTC+TGG 0.503712 tig0020882:+92523 Msa1387200:CDS
GGTGTTGTCACAATGATATC+AGG 0.504804 tig0020882:-92891 None:intergenic
GCAGCTACACTTCCGGTGAA+TGG 0.505831 tig0020882:+93429 Msa1387200:intron
AGAAATGACCTGAACGAGAG+AGG 0.509381 tig0020882:-91792 None:intergenic
TTTGTATGGAGTTGTATCCT+GGG 0.514071 tig0020882:-100492 None:intergenic
TGAAGATATTGGGCTATGCT+GGG 0.514289 tig0020882:+97097 Msa1387200:intron
CGTTGATAGAAGACGCCGCA+TGG 0.515325 tig0020882:+92938 Msa1387200:CDS
GTAGTTATTGCTGCAGAGAC+CGG 0.517794 tig0020882:+92452 Msa1387200:CDS
TCAAGAAAACAAGAAGAGAC+TGG 0.518017 tig0020882:+93358 Msa1387200:CDS
CTCAGTAATTTAAGGACTGA+TGG 0.522062 tig0020882:-100421 None:intergenic
AAGAAGTCTCTCCGCCGGCC+AGG 0.524452 tig0020882:+92561 Msa1387200:CDS
TTCCTCTCATTGATAAGCTG+AGG 0.530497 tig0020882:+92501 Msa1387200:CDS
TATGCATGGTGTTAAATATG+TGG 0.531983 tig0020882:+92965 Msa1387200:CDS
TTTAAATTTCTAAAACCAGT+AGG 0.532466 tig0020882:+100042 Msa1387200:three_prime_UTR
CAGTAACTTGGGACAGCTAG+AGG 0.533390 tig0020882:-99979 None:intergenic
AAGAAAGCCGCCTAATAGCC+CGG 0.534939 tig0020882:+100814 Msa1387200:three_prime_UTR
ATCTTCATTGTCACAATCCA+AGG 0.537346 tig0020882:+93517 Msa1387200:CDS
TCCTCTCATTGATAAGCTGA+GGG 0.540186 tig0020882:+92502 Msa1387200:CDS
GTGAATGGAAAGAAAACAGC+GGG 0.540547 tig0020882:+93444 Msa1387200:CDS
AAGAGAGAAGAAGAAGACAA+AGG 0.545582 tig0020882:-91569 None:intergenic
GTTGGATTCGGTATACATGC+TGG 0.545852 tig0020882:-98927 None:intergenic
ATGTCAGACGAGGAGGATGA+TGG 0.547971 tig0020882:+93294 Msa1387200:CDS
TTACAAAACATCAGTAACTT+GGG 0.548520 tig0020882:-99990 None:intergenic
ATGCTATTTCTGCAGGAGGA+TGG 0.549852 tig0020882:-100519 None:intergenic
AGGAGGATGGATCATTTGTA+TGG 0.550338 tig0020882:-100506 None:intergenic
TGATGCAGCTGCTCGTGGCG+TGG 0.557135 tig0020882:+97215 Msa1387200:CDS
ACATGATTGAGAAGAGCAGC+AGG 0.557430 tig0020882:-92912 None:intergenic
ACCATCTGTGTTGTCAGGAA+AGG 0.557627 tig0020882:+92427 Msa1387200:CDS
TTCAACAGCCTCAACTGTGT+TGG 0.557717 tig0020882:-97067 None:intergenic
GAAATGACCTGAACGAGAGA+GGG 0.559297 tig0020882:-91791 None:intergenic
TTAGTGCTGCAGCCATTTGT+GGG 0.562083 tig0020882:+92678 Msa1387200:CDS
CTCACCTCAGTGAGATGTAG+TGG 0.563394 tig0020882:-100019 None:intergenic
GAAAGCTAATGTCTATCAAG+AGG 0.563963 tig0020882:-100075 None:intergenic
ACAAGTGAAAGAGCTCATAA+GGG 0.567146 tig0020882:+96975 Msa1387200:CDS
ATTAGAGAGAGCTCGAGAAA+GGG 0.568016 tig0020882:-91753 None:intergenic
CGGTGGAAGGATCTGAGTAA+TGG 0.569099 tig0020882:-100394 None:intergenic
GACTGATGGTATGCGGTGGA+AGG 0.570723 tig0020882:-100407 None:intergenic
ATCATCCTCCTCGTCTGACA+TGG 0.571316 tig0020882:-93292 None:intergenic
ATTGCTGCAGAGACCGGCAG+TGG 0.572069 tig0020882:+92458 Msa1387200:CDS
GAAACGGCGCTTCCAACAAA+GGG 0.573494 tig0020882:-91653 None:intergenic
TGAAACGGCGCTTCCAACAA+AGG 0.574443 tig0020882:-91654 None:intergenic
ACTGTATGTCTTACCACTGC+CGG 0.574756 tig0020882:-92471 None:intergenic
AAGCCCAGTATTCAAAGGCA+AGG 0.577421 tig0020882:-100211 None:intergenic
ACGAGCAGAACTTTCCTGGC+CGG 0.577551 tig0020882:-92575 None:intergenic
CAATTTAAGAAGAAAGCCAC+TGG 0.578211 tig0020882:+99816 Msa1387200:three_prime_UTR
GAAGATTTGGATAATGGTGG+TGG 0.580546 tig0020882:+97021 Msa1387200:CDS
ATATAGGTGTCTTTGGAACC+GGG 0.582674 tig0020882:-100832 None:intergenic
TTGTCAACAGGAAGTGGGAA+AGG 0.584808 tig0020882:-100286 None:intergenic
GTGTGAGCAGGTAGTTAGGA+TGG 0.586604 tig0020882:+92619 Msa1387200:intron
CGCCGCATGGAATTTATGCA+TGG 0.588650 tig0020882:+92951 Msa1387200:CDS
AAAGCTAATGTCTATCAAGA+GGG 0.594030 tig0020882:-100074 None:intergenic
TGATAAAGAAGTCTCTCCGC+CGG 0.597198 tig0020882:+92556 Msa1387200:CDS
TCCTTTCCTGACAACACAGA+TGG 0.603340 tig0020882:-92428 None:intergenic
CCCCTCAGCTTATCAATGAG+AGG 0.603553 tig0020882:-92503 None:intergenic
CATGTTTCCTGATGCTGAGT+GGG 0.603761 tig0020882:+93482 Msa1387200:CDS
AGCCCAGTATTCAAAGGCAA+GGG 0.604903 tig0020882:-100210 None:intergenic
TCGGAAGATTTGGATAATGG+TGG 0.610027 tig0020882:+97018 Msa1387200:CDS
TGTACTGATGCAGCTGCTCG+TGG 0.611822 tig0020882:+97210 Msa1387200:CDS
AGCAGAACTTTCCTGGCCGG+CGG 0.612673 tig0020882:-92572 None:intergenic
TGAAGCCATGTCAGACGAGG+AGG 0.613709 tig0020882:+93287 Msa1387200:CDS
ATTGGTCGTACAGCTAGAGC+TGG 0.616027 tig0020882:+98887 Msa1387200:CDS
AGAATTGCACGTTGGATGAG+CGG 0.619703 tig0020882:+97142 Msa1387200:CDS
AGGATGGCTAATAGTCTTCG+TGG 0.620179 tig0020882:+92635 Msa1387200:CDS
AAAAGACACTTTCTTTGCCG+AGG 0.622396 tig0020882:+91694 Msa1387200:CDS
AAGCTGATATGCTCCTCTGT+GGG 0.624872 tig0020882:+93109 Msa1387200:CDS
TGATGCTTCAGAAGGTGAAG+AGG 0.626535 tig0020882:+93254 Msa1387200:intron
AATGGCTGCAGCACTAACAA+TGG 0.628494 tig0020882:-92672 None:intergenic
TGATAAGCTGAGGGGTACAG+AGG 0.632914 tig0020882:+92511 Msa1387200:CDS
GTTGATTTCTACGACAAAGG+TGG 0.637199 tig0020882:+97177 Msa1387200:CDS
TTTGGAACCGGGCTATTAGG+CGG 0.639130 tig0020882:-100821 None:intergenic
AGTAACTTGGGACAGCTAGA+GGG 0.642530 tig0020882:-99978 None:intergenic
CTTCAATAGAGCAACTCCAG+TGG 0.645202 tig0020882:-99832 None:intergenic
CGAGGAGGATGATGGTAACG+AGG 0.645225 tig0020882:+93302 Msa1387200:CDS
AGATGCTGTTCGTCGTGCAG+GGG 0.648856 tig0020882:+98961 Msa1387200:CDS
AAGTATTGTCAACAGGAAGT+GGG 0.649121 tig0020882:-100291 None:intergenic
CCTTAAATTACTGAGACTGG+AGG 0.651395 tig0020882:+100429 Msa1387200:three_prime_UTR
ACTCCACGAAACGTTATCCT+CGG 0.651707 tig0020882:-91711 None:intergenic
AATTGAAGCCATGTCAGACG+AGG 0.652612 tig0020882:+93284 Msa1387200:CDS
AGGGGAACTCGGTCTACCTG+TGG 0.664526 tig0020882:+98979 Msa1387200:CDS
GAAGAGACTGGAGAAGAGTG+AGG 0.668144 tig0020882:+93370 Msa1387200:CDS
GAAGCTGATATGCTCCTCTG+TGG 0.669619 tig0020882:+93108 Msa1387200:CDS
AGTTGAGGCTGTTGAAGCTG+TGG 0.675682 tig0020882:+97074 Msa1387200:CDS
TAAGGACTGATGGTATGCGG+TGG 0.676183 tig0020882:-100411 None:intergenic
TTATCATAAGAATTGCACGT+TGG 0.677936 tig0020882:+97134 Msa1387200:CDS
TATTCTGGAAGCTCCCACAG+AGG 0.680409 tig0020882:-93122 None:intergenic
GAAACCTGATGTCATCCAAG+AGG 0.695502 tig0020882:-100164 None:intergenic
ACATGTTTCCTGATGCTGAG+TGG 0.696080 tig0020882:+93481 Msa1387200:CDS
ATTTAAGGACTGATGGTATG+CGG 0.696542 tig0020882:-100414 None:intergenic
CCACGATATAAAGCAAACCC+AGG 0.698006 tig0020882:+100475 Msa1387200:three_prime_UTR
CACCATGCATAAATTCCATG+CGG 0.706774 tig0020882:-92953 None:intergenic
GGTGTTTGCCAACACAGTTG+AGG 0.709075 tig0020882:+97059 Msa1387200:CDS
CCTCTCATTGATAAGCTGAG+GGG 0.726942 tig0020882:+92503 Msa1387200:CDS
TGGTGGCATTCATAGAACAA+TGG 0.741830 tig0020882:+97038 Msa1387200:CDS
CACACCACTACATCTCACTG+AGG 0.766057 tig0020882:+100015 Msa1387200:three_prime_UTR
GGTGAATGGAAAGAAAACAG+CGG 0.768400 tig0020882:+93443 Msa1387200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTAACTAATTGAAAA+TGG + tig0020882:91942-91961 Msa1387200:intron 10.0%
!! TTTATTAACTAATTGAAAAT+GGG + tig0020882:91943-91962 Msa1387200:intron 10.0%
!!! TATATTTTCTAATTTCTAAT+TGG + tig0020882:93073-93092 Msa1387200:intron 10.0%
!! TTCTATAATATAAATAACAA+AGG - tig0020882:96283-96302 None:intergenic 10.0%
!!! AAGTTCATAATATTTTTTTA+TGG + tig0020882:96369-96388 Msa1387200:intron 10.0%
!!! TAAATTTTGTAATTAATCAA+CGG - tig0020882:98447-98466 None:intergenic 10.0%
!!! TTTTATTTTTATATAACCTT+AGG + tig0020882:98770-98789 Msa1387200:intron 10.0%
!! AATTATAAAACTGTATTTAT+TGG + tig0020882:99004-99023 Msa1387200:intron 10.0%
!! ATAAAAAAAAGTTAATACAT+TGG + tig0020882:99079-99098 Msa1387200:intron 10.0%
!! TAAAAAAAAGTTAATACATT+GGG + tig0020882:99080-99099 Msa1387200:intron 10.0%
!!! TTTTTTTTTTATTTTTACCT+TGG + tig0020882:99521-99540 Msa1387200:intron 10.0%
!! ATTTATAGTTATGAAATTTG+TGG + tig0020882:92770-92789 Msa1387200:intron 15.0%
!! TAGAAAATATAAACATAACT+AGG - tig0020882:93064-93083 None:intergenic 15.0%
!! AAATTGTATTGTATGAATAT+CGG + tig0020882:95171-95190 Msa1387200:intron 15.0%
!!! TTTTTTTGTCCAAAATAAAA+AGG - tig0020882:95538-95557 None:intergenic 15.0%
!! ATTATGAAAAAAATACCAAA+TGG + tig0020882:95816-95835 Msa1387200:intron 15.0%
!! TCATATTCAAATGAATTATT+GGG - tig0020882:95944-95963 None:intergenic 15.0%
!! TTCATATTCAAATGAATTAT+TGG - tig0020882:95945-95964 None:intergenic 15.0%
!! AATTTCTTTCATCAATTTAT+CGG - tig0020882:96253-96272 None:intergenic 15.0%
!! TAATTAAACTTATAGGAATT+AGG + tig0020882:97618-97637 Msa1387200:intron 15.0%
!!! ACATTTTGACATAAATAAAT+CGG - tig0020882:98042-98061 None:intergenic 15.0%
!! ATGTAATATACATTATTTCA+TGG + tig0020882:98582-98601 Msa1387200:intron 15.0%
!! ATAATAAAATATAACACCTA+AGG - tig0020882:98789-98808 None:intergenic 15.0%
!! TTTATTATATATTCACCTTA+TGG - tig0020882:100114-100133 None:intergenic 15.0%
!! TTAAAATCATATTAACAACT+TGG + tig0020882:100726-100745 Msa1387200:intron 15.0%
!! AATAAAAACAGAAATATAGC+AGG - tig0020882:91877-91896 None:intergenic 20.0%
!!! AATCAAATTTTGAACATACA+GGG - tig0020882:91922-91941 None:intergenic 20.0%
!!! AAATCAAATTTTGAACATAC+AGG - tig0020882:91923-91942 None:intergenic 20.0%
!! TAAGGTTAGATTATATAACT+TGG + tig0020882:92260-92279 Msa1387200:intron 20.0%
!!! TTTGTTTTCATTCTTCTATT+CGG + tig0020882:92319-92338 Msa1387200:intron 20.0%
!! ACTGATAATAAGTACAAAAA+GGG - tig0020882:93556-93575 None:intergenic 20.0%
!! TACTGATAATAAGTACAAAA+AGG - tig0020882:93557-93576 None:intergenic 20.0%
!!! ATTCAATTTTATTTGCTACT+TGG + tig0020882:93581-93600 Msa1387200:intron 20.0%
!!! CTTTAAAAAATAAAACACGT+GGG + tig0020882:94405-94424 Msa1387200:intron 20.0%
!! TTTAAAAAATAAAACACGTG+GGG + tig0020882:94406-94425 Msa1387200:intron 20.0%
!!! AATAGTTTGAAGTATCTAAA+AGG + tig0020882:95033-95052 Msa1387200:intron 20.0%
!! AATTTCTTGTGAGTTATTAT+AGG + tig0020882:95204-95223 Msa1387200:intron 20.0%
!!! TTATGTATTGCATTTTCTTA+TGG - tig0020882:95256-95275 None:intergenic 20.0%
!! GATAAAAAAATTGCTTTAAC+AGG - tig0020882:95599-95618 None:intergenic 20.0%
!!! ACAATAATTTTTTGAGAGAA+GGG - tig0020882:95641-95660 None:intergenic 20.0%
!!! AACAATAATTTTTTGAGAGA+AGG - tig0020882:95642-95661 None:intergenic 20.0%
!! TAACTTGAAATGTAGAAAAA+GGG - tig0020882:95693-95712 None:intergenic 20.0%
!! ATAACTTGAAATGTAGAAAA+AGG - tig0020882:95694-95713 None:intergenic 20.0%
!!! TTTTTCATAATAGATCCAAA+AGG - tig0020882:95807-95826 None:intergenic 20.0%
!! TTCAAATGAATTTATCCATT+TGG - tig0020882:95834-95853 None:intergenic 20.0%
!! TTTAAATCACAAATACCAAA+AGG + tig0020882:95970-95989 Msa1387200:intron 20.0%
!! ATGAAGTTGAAATTATGTAT+GGG + tig0020882:96081-96100 Msa1387200:intron 20.0%
!! TACTATTGTATTAGTAAGTA+AGG + tig0020882:96193-96212 Msa1387200:intron 20.0%
!! ATAATATAAATAACAAAGGC+TGG - tig0020882:96279-96298 None:intergenic 20.0%
!!! GAAATTTTATTCATACTTGA+TGG + tig0020882:96309-96328 Msa1387200:intron 20.0%
!! AGAATAAAATAGAAAGAGTA+TGG - tig0020882:96653-96672 None:intergenic 20.0%
!!! TTTTCCTTATACATGTTATA+AGG + tig0020882:97273-97292 Msa1387200:intron 20.0%
!! TATACCTTATAACATGTATA+AGG - tig0020882:97280-97299 None:intergenic 20.0%
!!! CTTAAATTTTGAAAGTTCTA+GGG + tig0020882:97340-97359 Msa1387200:intron 20.0%
!!! TAGACAATTTTCTTTGTAAT+TGG + tig0020882:97876-97895 Msa1387200:intron 20.0%
!! ACAAAAGTAAAATTGTTTGT+TGG + tig0020882:98001-98020 Msa1387200:intron 20.0%
!! CAAAAGTAAAATTGTTTGTT+GGG + tig0020882:98002-98021 Msa1387200:intron 20.0%
!! ATATTACATAACATGATTTG+AGG - tig0020882:98571-98590 None:intergenic 20.0%
!!! ATATTAATGACTTGTATAGT+TGG - tig0020882:99172-99191 None:intergenic 20.0%
!!! CTTTCTTTTTTATCTTGTTA+CGG - tig0020882:99271-99290 None:intergenic 20.0%
!!! TTTTGATTTTTAAAGCTCTA+TGG - tig0020882:99314-99333 None:intergenic 20.0%
!!! TATTGATTTTTAAAGCTCTA+TGG - tig0020882:99365-99384 None:intergenic 20.0%
!!! TTTTTTTATTTTTACCTTGG+AGG + tig0020882:99524-99543 Msa1387200:intron 20.0%
!!! GATTAGTTTTCATATTACTT+AGG + tig0020882:99555-99574 Msa1387200:intron 20.0%
!!! TTTAAATTTCTAAAACCAGT+AGG + tig0020882:100042-100061 Msa1387200:three_prime_UTR 20.0%
!!! ATTTTTGAAGTAATTTCATG+TGG + tig0020882:100576-100595 Msa1387200:intron 20.0%
!! TCATTTCACAAAACATTAAA+AGG - tig0020882:100641-100660 None:intergenic 20.0%
!!! AATATGATTTTAACTATGAC+CGG - tig0020882:100719-100738 None:intergenic 20.0%
!! ATGTTTCTTGAACAAAAAAT+TGG + tig0020882:100789-100808 Msa1387200:three_prime_UTR 20.0%
!!! AAATAGGTGAATTTTGAAGA+TGG - tig0020882:91493-91512 None:intergenic 25.0%
! ATTGAAATCTTCTGATGAAA+CGG - tig0020882:91672-91691 None:intergenic 25.0%
!!! TGATTTATTAGCTTTAGTCA+AGG + tig0020882:91972-91991 Msa1387200:intron 25.0%
!!! CTCGGACTTTTTTTTTTTAT+TGG + tig0020882:92043-92062 Msa1387200:intron 25.0%
!! TTGTTTTCATTCTTCTATTC+GGG + tig0020882:92320-92339 Msa1387200:intron 25.0%
!!! TCAGCACTAAAAATCTTTTT+TGG + tig0020882:92845-92864 Msa1387200:intron 25.0%
!!! TAAAAATCTTTTTTGGACCA+GGG + tig0020882:92852-92871 Msa1387200:intron 25.0%
!! TTTTCTAATTTCTAATTGGC+AGG + tig0020882:93077-93096 Msa1387200:intron 25.0%
! TTCAGCTTCGTTATTAATAT+TGG - tig0020882:93334-93353 None:intergenic 25.0%
! TGATAATAAGTACAAAAAGG+GGG - tig0020882:93554-93573 None:intergenic 25.0%
! CTGATAATAAGTACAAAAAG+GGG - tig0020882:93555-93574 None:intergenic 25.0%
! TAATTTACCAAGGTAAAAGA+TGG + tig0020882:93768-93787 Msa1387200:intron 25.0%
!! TGGGCAATAAATTTTAAACT+TGG - tig0020882:93812-93831 None:intergenic 25.0%
! TTCTTCAATTTAAGTAAACC+TGG - tig0020882:93900-93919 None:intergenic 25.0%
!!! TGATTGTTTTTCAGTTTGAA+TGG + tig0020882:93961-93980 Msa1387200:intron 25.0%
!!! GCTTTAAAAAATAAAACACG+TGG + tig0020882:94404-94423 Msa1387200:intron 25.0%
!! AAGTAAAAGTACAAGTACAA+AGG + tig0020882:94665-94684 Msa1387200:intron 25.0%
!! AGTAAAAGTACAAGTACAAA+GGG + tig0020882:94666-94685 Msa1387200:intron 25.0%
! TAGATAGTAACTCAATCATT+AGG - tig0020882:94799-94818 None:intergenic 25.0%
! ATTGAGTTACTATCTAATCT+AGG + tig0020882:94803-94822 Msa1387200:intron 25.0%
! TAGATAGTAACTCAATCATT+AGG - tig0020882:94799-94818 None:intergenic 25.0%
! ATTGAGTTACTATCTAATCT+AGG + tig0020882:94803-94822 Msa1387200:intron 25.0%
!!! ACACCTTCTAAAATTAACAT+GGG - tig0020882:95499-95518 None:intergenic 25.0%
!!! AACACCTTCTAAAATTAACA+TGG - tig0020882:95500-95519 None:intergenic 25.0%
!!! CATCATACACCTTTTTATTT+TGG + tig0020882:95526-95545 Msa1387200:intron 25.0%
!!! CAATAATTTTTTGAGAGAAG+GGG - tig0020882:95640-95659 None:intergenic 25.0%
! ACAGTGAAGATTAATTAAGT+GGG - tig0020882:95724-95743 None:intergenic 25.0%
! AACAGTGAAGATTAATTAAG+TGG - tig0020882:95725-95744 None:intergenic 25.0%
!! TGTTAGAAAATTCATCCTTT+TGG - tig0020882:95988-96007 None:intergenic 25.0%
! CATACATAATTTCAACTTCA+TGG - tig0020882:96082-96101 None:intergenic 25.0%
! CATGAAGTTGAAATTATGTA+TGG + tig0020882:96080-96099 Msa1387200:intron 25.0%
! TGAAGTTGAAATTATGTATG+GGG + tig0020882:96082-96101 Msa1387200:intron 25.0%
! TATTGTATTAGTAAGTAAGG+TGG + tig0020882:96196-96215 Msa1387200:intron 25.0%
! AACTAATTGCATGCTAATAA+TGG - tig0020882:96542-96561 None:intergenic 25.0%
! TTCTTATACAAATACCACAT+AGG + tig0020882:96581-96600 Msa1387200:intron 25.0%
! AATAGTATGTTAGTAGTTGT+TGG - tig0020882:96702-96721 None:intergenic 25.0%
!! TGTGAATCACAGTTTAAAAT+CGG + tig0020882:96999-97018 Msa1387200:CDS 25.0%
!!! GCTTAAATTTTGAAAGTTCT+AGG + tig0020882:97339-97358 Msa1387200:intron 25.0%
!!! CATTTTGCAGTTTTATTTCT+GGG - tig0020882:97819-97838 None:intergenic 25.0%
! TCTATAAAAATGCACAAACT+CGG - tig0020882:97860-97879 None:intergenic 25.0%
! CAAATCCAAAGAAATGATTA+GGG - tig0020882:98096-98115 None:intergenic 25.0%
! ACAAATCCAAAGAAATGATT+AGG - tig0020882:98097-98116 None:intergenic 25.0%
!! GTTTATAATTAAGGGTACAA+TGG - tig0020882:98414-98433 None:intergenic 25.0%
! CGGATTGAGTTTATAATTAA+GGG - tig0020882:98422-98441 None:intergenic 25.0%
! CCTTAATTATAAACTCAATC+CGG + tig0020882:98420-98439 Msa1387200:intron 25.0%
!!! AAATTTAAAAAGCACTTGCA+AGG + tig0020882:98460-98479 Msa1387200:intron 25.0%
!!! ACAGTTTTATAATTTACCAC+AGG - tig0020882:98998-99017 None:intergenic 25.0%
! TTCAAATATCTCAATGTGTA+TGG - tig0020882:99051-99070 None:intergenic 25.0%
!! TTTGATAGATTCCAACATTT+TGG + tig0020882:99191-99210 Msa1387200:intron 25.0%
! CGTAACAAGATAAAAAAGAA+AGG + tig0020882:99269-99288 Msa1387200:CDS 25.0%
!! AGTCTTGTATCCTTATAAAT+AGG + tig0020882:99578-99597 Msa1387200:intron 25.0%
! GTCTTGTATCCTTATAAATA+GGG + tig0020882:99579-99598 Msa1387200:intron 25.0%
! TCTTGTATCCTTATAAATAG+GGG + tig0020882:99580-99599 Msa1387200:intron 25.0%
! AATAGAAACCCCTATTTATA+AGG - tig0020882:99591-99610 None:intergenic 25.0%
! TTGAAGTAAAACTCATACTT+TGG + tig0020882:99849-99868 Msa1387200:three_prime_UTR 25.0%
! AAAACTGATGTTCGAAAAAA+AGG + tig0020882:99892-99911 Msa1387200:three_prime_UTR 25.0%
! TTACAAAACATCAGTAACTT+GGG - tig0020882:99993-100012 None:intergenic 25.0%
! TTTACAAAACATCAGTAACT+TGG - tig0020882:99994-100013 None:intergenic 25.0%
!!! TCTTATTTTCGTAATCCATA+AGG + tig0020882:100096-100115 Msa1387200:three_prime_UTR 25.0%
!! TAATTATCATGTTTTCTGAG+TGG - tig0020882:100351-100370 None:intergenic 25.0%
! CAAAACATTAAAAGGAAAGA+AGG - tig0020882:100633-100652 None:intergenic 25.0%
!!! ATATGATTTTAACTATGACC+GGG - tig0020882:100718-100737 None:intergenic 25.0%
! ATCATATTAACAACTTGGAA+AGG + tig0020882:100731-100750 Msa1387200:intron 25.0%
! AAGAATTGATGGTAGCAAAT+AGG - tig0020882:91509-91528 None:intergenic 30.0%
GTTTCATCAGAAGATTTCAA+TGG + tig0020882:91671-91690 Msa1387200:CDS 30.0%
TTTGTTGGAACAACTTTACT+CGG + tig0020882:92025-92044 Msa1387200:intron 30.0%
AAGCAAATGTTGATATTGCT+AGG - tig0020882:92146-92165 None:intergenic 30.0%
!! AAGTCACAACTCTAAAACTA+TGG - tig0020882:92220-92239 None:intergenic 30.0%
AGAATCATTTATCACTTCTC+AGG - tig0020882:92293-92312 None:intergenic 30.0%
! TGTTTTCATTCTTCTATTCG+GGG + tig0020882:92321-92340 Msa1387200:intron 30.0%
!!! TTATTTCCTGATGCTGTTTT+TGG + tig0020882:92735-92754 Msa1387200:intron 30.0%
!!! CTAAAAATCTTTTTTGGACC+AGG + tig0020882:92851-92870 Msa1387200:intron 30.0%
! TATGCATGGTGTTAAATATG+TGG + tig0020882:92965-92984 Msa1387200:CDS 30.0%
! ACAAGAGTTTTTCATCATAG+CGG - tig0020882:93173-93192 None:intergenic 30.0%
CGAACATTACTAATTTACCA+AGG + tig0020882:93758-93777 Msa1387200:intron 30.0%
!! TGTTTTTGCGAATTTCATCA+AGG - tig0020882:93928-93947 None:intergenic 30.0%
AGCATGATGAGCAAATAATT+GGG - tig0020882:94228-94247 None:intergenic 30.0%
AAGCATGATGAGCAAATAAT+TGG - tig0020882:94229-94248 None:intergenic 30.0%
AAATAGTTCTCCATCAAGAA+TGG - tig0020882:94271-94290 None:intergenic 30.0%
TATGACGCATTTATAGCAAA+TGG + tig0020882:94313-94332 Msa1387200:intron 30.0%
!! GGTTTCAAATTTGGTTTGAA+GGG - tig0020882:94602-94621 None:intergenic 30.0%
!! TGGTTTCAAATTTGGTTTGA+AGG - tig0020882:94603-94622 None:intergenic 30.0%
! TCAAACCAAATTTGAAACCA+AGG + tig0020882:94603-94622 Msa1387200:intron 30.0%
AGATTCCTTGGTTTCAAATT+TGG - tig0020882:94611-94630 None:intergenic 30.0%
! AATTTGAAACCAAGGAATCT+TGG + tig0020882:94611-94630 Msa1387200:intron 30.0%
ATCAAATAACCAAGATTCCT+TGG - tig0020882:94623-94642 None:intergenic 30.0%
! TTATTTGATGTTTTTCCCCT+GGG + tig0020882:94634-94653 Msa1387200:intron 30.0%
! GTAAAAGTACAAGTACAAAG+GGG + tig0020882:94667-94686 Msa1387200:intron 30.0%
TATCTAATCTAGGAACGTAT+TGG + tig0020882:94813-94832 Msa1387200:intron 30.0%
GAAATATTTGGACATGTCAT+GGG - tig0020882:94946-94965 None:intergenic 30.0%
CTTACACGAAAGGAAATATT+TGG - tig0020882:94958-94977 None:intergenic 30.0%
! ATTCCGTTGAAGTTTTCATT+GGG + tig0020882:94999-95018 Msa1387200:intron 30.0%
! CTTTTAGATACCTCAAATCA+TGG - tig0020882:95066-95085 None:intergenic 30.0%
! CATGATTTGAGGTATCTAAA+AGG + tig0020882:95064-95083 Msa1387200:intron 30.0%
GGTTTCTAACTAAACACAAA+AGG + tig0020882:95101-95120 Msa1387200:intron 30.0%
AAAAGGAATAACTTGACAGT+TGG + tig0020882:95118-95137 Msa1387200:intron 30.0%
AAGAACAAAATCTAGTAGCA+AGG + tig0020882:95147-95166 Msa1387200:intron 30.0%
! GCATTTTCTTATGGAACATT+GGG - tig0020882:95247-95266 None:intergenic 30.0%
! TGCATTTTCTTATGGAACAT+TGG - tig0020882:95248-95267 None:intergenic 30.0%
TACATAAGCAATTTACCTCT+AGG + tig0020882:95269-95288 Msa1387200:intron 30.0%
TGTGAATAAGCTGAACTATT+TGG + tig0020882:95295-95314 Msa1387200:intron 30.0%
GTGAATAAGCTGAACTATTT+GGG + tig0020882:95296-95315 Msa1387200:intron 30.0%
TGAACTATTTGGGAACAAAT+CGG + tig0020882:95306-95325 Msa1387200:intron 30.0%
ACAACCTCAAACTTAAGATT+AGG + tig0020882:95377-95396 Msa1387200:intron 30.0%
!! CTTCTAAAATTAACATGGGT+GGG - tig0020882:95495-95514 None:intergenic 30.0%
ACAACTGAAGAAAGAGAAAA+AGG - tig0020882:95563-95582 None:intergenic 30.0%
AAAATTATTGTTGCACGAAC+CGG + tig0020882:95650-95669 Msa1387200:intron 30.0%
CAGTGAAGATTAATTAAGTG+GGG - tig0020882:95723-95742 None:intergenic 30.0%
TCATAATAGATCCAAAAGGA+AGG - tig0020882:95803-95822 None:intergenic 30.0%
AACAAAATTGCATAGCTATG+AGG + tig0020882:96004-96023 Msa1387200:intron 30.0%
AATAGTCTCCTTCAAAATGT+TGG - tig0020882:96227-96246 None:intergenic 30.0%
TTTATGGACTTTAATCTGCT+CGG + tig0020882:96385-96404 Msa1387200:intron 30.0%
!! TAGTATGTCACTTTGTAACA+AGG + tig0020882:96470-96489 Msa1387200:intron 30.0%
CGTTAAACATGAATTTGAGT+GGG - tig0020882:96629-96648 None:intergenic 30.0%
CCACTCAAATTCATGTTTAA+CGG + tig0020882:96627-96646 Msa1387200:intron 30.0%
! TTAGTAGTTGTTGGTTAGAA+GGG - tig0020882:96693-96712 None:intergenic 30.0%
TTTCCTCTTTACATGTCTAA+TGG + tig0020882:96773-96792 Msa1387200:intron 30.0%
TTCCTCTTTACATGTCTAAT+GGG + tig0020882:96774-96793 Msa1387200:intron 30.0%
TCAAAGATGTTGTGCATATA+TGG - tig0020882:96813-96832 None:intergenic 30.0%
! CAGTTTAAAATCGGAAGATT+TGG + tig0020882:97008-97027 Msa1387200:CDS 30.0%
AAATCGGAAGATTTGGATAA+TGG + tig0020882:97015-97034 Msa1387200:CDS 30.0%
TTATCATAAGAATTGCACGT+TGG + tig0020882:97134-97153 Msa1387200:CDS 30.0%
! TTAGTTGATTTCTACGACAA+AGG + tig0020882:97174-97193 Msa1387200:CDS 30.0%
TGAATAACATGAGAGACATT+TGG - tig0020882:97246-97265 None:intergenic 30.0%
AAATGTCTCTCATGTTATTC+AGG + tig0020882:97245-97264 Msa1387200:CDS 30.0%
AATGATTGACAAACGACAAA+GGG - tig0020882:97790-97809 None:intergenic 30.0%
AAATGATTGACAAACGACAA+AGG - tig0020882:97791-97810 None:intergenic 30.0%
! TGTCGTTTGTCAATCATTTA+TGG + tig0020882:97792-97811 Msa1387200:intron 30.0%
!!! GCATTTTGCAGTTTTATTTC+TGG - tig0020882:97820-97839 None:intergenic 30.0%
GGATTCAGCTAAAATAAGAA+CGG + tig0020882:97897-97916 Msa1387200:intron 30.0%
AATGTTTATCAGTGTTTCTC+TGG + tig0020882:98057-98076 Msa1387200:intron 30.0%
TTGTTCCCTAATCATTTCTT+TGG + tig0020882:98088-98107 Msa1387200:intron 30.0%
TTGAAGATCTTAGGTGAAAA+GGG - tig0020882:98141-98160 None:intergenic 30.0%
ATTGAAGATCTTAGGTGAAA+AGG - tig0020882:98142-98161 None:intergenic 30.0%
AAGATTGCATTGAAGATCTT+AGG - tig0020882:98150-98169 None:intergenic 30.0%
CCGGATTGAGTTTATAATTA+AGG - tig0020882:98423-98442 None:intergenic 30.0%
TTTGTAATTAATCAACGGTC+CGG - tig0020882:98442-98461 None:intergenic 30.0%
!! GTTTGATAATTTTCACACGA+TGG + tig0020882:98507-98526 Msa1387200:intron 30.0%
AATGAAGTGACTCAAATAAG+AGG - tig0020882:98617-98636 None:intergenic 30.0%
! TTTATTGGCTGTAGTAATCT+TGG + tig0020882:99019-99038 Msa1387200:intron 30.0%
!! ATGATGAGAGCATTAACTAT+AGG + tig0020882:99124-99143 Msa1387200:intron 30.0%
TAACAATCACTCCAAAATGT+TGG - tig0020882:99205-99224 None:intergenic 30.0%
GATTGTTACACTATTAATGC+AGG + tig0020882:99217-99236 Msa1387200:intron 30.0%
TGTGTTCGAAATAGAAAATG+CGG + tig0020882:99446-99465 Msa1387200:intron 30.0%
AAGTACAAAATGATGGTTAC+TGG - tig0020882:99728-99747 None:intergenic 30.0%
TTGCTACAAGTACAAAATGA+TGG - tig0020882:99735-99754 None:intergenic 30.0%
GATGTTCGAAAAAAAGGAAA+AGG + tig0020882:99898-99917 Msa1387200:three_prime_UTR 30.0%
AAAGCTAATGTCTATCAAGA+GGG - tig0020882:100077-100096 None:intergenic 30.0%
TAGACATAAATTTCACCTCT+TGG + tig0020882:100149-100168 Msa1387200:three_prime_UTR 30.0%
AATCCTTTCAAGAAGAATAG+AGG + tig0020882:100262-100281 Msa1387200:three_prime_UTR 30.0%
AAATAGCATAGGAAATCAAC+AGG + tig0020882:100533-100552 Msa1387200:intron 30.0%
! GTTTTGTGAAATGAAGACTT+AGG + tig0020882:100647-100666 Msa1387200:intron 30.0%
AAATGAAGACTTAGGATACT+TGG + tig0020882:100655-100674 Msa1387200:intron 30.0%
!! TGTTGATGATGCCAATTAAT+GGG - tig0020882:100689-100708 None:intergenic 30.0%
!! TTGTTGATGATGCCAATTAA+TGG - tig0020882:100690-100709 None:intergenic 30.0%
CTTCAGTTACATAACTTACT+TGG + tig0020882:100761-100780 Msa1387200:intron 30.0%
GAGAGAAGAAGAAGAATTGA+TGG - tig0020882:91520-91539 None:intergenic 35.0%
AGAGAGAAGAAGAAGACAAA+GGG - tig0020882:91571-91590 None:intergenic 35.0%
AAGAGAGAAGAAGAAGACAA+AGG - tig0020882:91572-91591 None:intergenic 35.0%
! AAAGTTCGAAATTGGTTCTC+GGG - tig0020882:92008-92027 None:intergenic 35.0%
! CAAAGTTCGAAATTGGTTCT+CGG - tig0020882:92009-92028 None:intergenic 35.0%
GAACCAATTTCGAACTTTGT+TGG + tig0020882:92010-92029 Msa1387200:intron 35.0%
GTTCCAACAAAGTTCGAAAT+TGG - tig0020882:92016-92035 None:intergenic 35.0%
TTGTAGTTGTCAGTTTCAAG+TGG - tig0020882:92090-92109 None:intergenic 35.0%
ACAATGTCTTAGTTCAAACC+CGG + tig0020882:92106-92125 Msa1387200:intron 35.0%
AAATGTTGATATTGCTAGGC+TGG - tig0020882:92142-92161 None:intergenic 35.0%
!! CACAACTCTAAAACTATGGT+TGG - tig0020882:92216-92235 None:intergenic 35.0%
ACTTGTGTCAAGAACGAAAT+TGG + tig0020882:92236-92255 Msa1387200:intron 35.0%
CTTGTGTCAAGAACGAAATT+GGG + tig0020882:92237-92256 Msa1387200:intron 35.0%
TACACACACAGAACAAGAAA+CGG - tig0020882:92393-92412 None:intergenic 35.0%
AGATAACCAAAAACAGCATC+AGG - tig0020882:92744-92763 None:intergenic 35.0%
GGTTTACTACACTATATCTC+TGG + tig0020882:92791-92810 Msa1387200:intron 35.0%
TCAAGAAAACAAGAAGAGAC+TGG + tig0020882:93358-93377 Msa1387200:CDS 35.0%
ATCTTCATTGTCACAATCCA+AGG + tig0020882:93517-93536 Msa1387200:CDS 35.0%
CAATTAGGACATATATCCAC+CGG + tig0020882:93624-93643 Msa1387200:intron 35.0%
AATTAGGACATATATCCACC+GGG + tig0020882:93625-93644 Msa1387200:intron 35.0%
ACTTTCCTAATTTGATGTCC+CGG - tig0020882:93646-93665 None:intergenic 35.0%
! TCAGTGGTCGTATATCTTTT+TGG + tig0020882:93676-93695 Msa1387200:intron 35.0%
TATTGACAGTGCACAATCAA+TGG - tig0020882:93705-93724 None:intergenic 35.0%
TAATGTGACAGGAATGTGTA+TGG + tig0020882:93723-93742 Msa1387200:intron 35.0%
! GTTCTTACCATCTTTTACCT+TGG - tig0020882:93778-93797 None:intergenic 35.0%
GGTATTCATCTAAGTCTCAT+GGG - tig0020882:93831-93850 None:intergenic 35.0%
AGGTATTCATCTAAGTCTCA+TGG - tig0020882:93832-93851 None:intergenic 35.0%
TGAGACTTAGATGAATACCT+AGG + tig0020882:93832-93851 Msa1387200:intron 35.0%
CACTTATGATCATACTTCCT+AGG - tig0020882:93852-93871 None:intergenic 35.0%
! CTAGGAAGTATGATCATAAG+TGG + tig0020882:93850-93869 Msa1387200:intron 35.0%
GGATCTGTTTGACTAACTTA+AGG - tig0020882:93879-93898 None:intergenic 35.0%
TAAGTTAGTCAAACAGATCC+AGG + tig0020882:93879-93898 Msa1387200:intron 35.0%
!! TGACTGTTATTGAGTTGGTT+AGG - tig0020882:94059-94078 None:intergenic 35.0%
ACTCATGACTGTTATTGAGT+TGG - tig0020882:94064-94083 None:intergenic 35.0%
TAATTGGGACCAGTACATAT+AGG - tig0020882:94213-94232 None:intergenic 35.0%
TGTCGTTGAAGAGTAATTAC+TGG + tig0020882:94382-94401 Msa1387200:intron 35.0%
ATAAGTCTGAGCATAACCTT+TGG - tig0020882:94491-94510 None:intergenic 35.0%
ATAGAAGCCAACTTAGCTAT+AGG - tig0020882:94538-94557 None:intergenic 35.0%
! GTTATTTGATGTTTTTCCCC+TGG + tig0020882:94633-94652 Msa1387200:intron 35.0%
! TTTTACTTGCTTCAATCCCA+GGG - tig0020882:94653-94672 None:intergenic 35.0%
! CAAAGGGGATTTTTCTCATT+TGG + tig0020882:94682-94701 Msa1387200:intron 35.0%
AACTGCAACTTCTGATACTT+TGG + tig0020882:94754-94773 Msa1387200:intron 35.0%
! TTAGGAGCGTGTTTAACATT+TGG - tig0020882:94861-94880 None:intergenic 35.0%
GGAAATATTTGGACATGTCA+TGG - tig0020882:94947-94966 None:intergenic 35.0%
! CATTCCGTTGAAGTTTTCAT+TGG + tig0020882:94998-95017 Msa1387200:intron 35.0%
CATCCCAATGAAAACTTCAA+CGG - tig0020882:95005-95024 None:intergenic 35.0%
! TTGAAGTTTTCATTGGGATG+TGG + tig0020882:95005-95024 Msa1387200:intron 35.0%
GAACTATTTGGGAACAAATC+GGG + tig0020882:95307-95326 Msa1387200:intron 35.0%
TGAGCCTAATCTTAAGTTTG+AGG - tig0020882:95384-95403 None:intergenic 35.0%
!! CCTTCTAAAATTAACATGGG+TGG - tig0020882:95496-95515 None:intergenic 35.0%
! CCACCCATGTTAATTTTAGA+AGG + tig0020882:95493-95512 Msa1387200:intron 35.0%
AAATTATTGTTGCACGAACC+GGG + tig0020882:95651-95670 Msa1387200:intron 35.0%
TAATAGATCCAAAAGGAAGG+TGG - tig0020882:95800-95819 None:intergenic 35.0%
TCATTTGAATATCCACGTAC+AGG + tig0020882:95845-95864 Msa1387200:intron 35.0%
CATTTGAATATCCACGTACA+GGG + tig0020882:95846-95865 Msa1387200:intron 35.0%
ATTAATTCATACCCTGTACG+TGG - tig0020882:95860-95879 None:intergenic 35.0%
ATGAGGATCAGAAACTCAAT+CGG + tig0020882:96021-96040 Msa1387200:intron 35.0%
ATGGGGAAACTAAAAGCAAA+TGG + tig0020882:96099-96118 Msa1387200:intron 35.0%
! GTCCTTCATGAATCTTTTCT+GGG - tig0020882:96423-96442 None:intergenic 35.0%
! AGTCCTTCATGAATCTTTTC+TGG - tig0020882:96424-96443 None:intergenic 35.0%
!! ATGTCACTTTGTAACAAGGT+CGG + tig0020882:96474-96493 Msa1387200:intron 35.0%
CCGTTAAACATGAATTTGAG+TGG - tig0020882:96630-96649 None:intergenic 35.0%
! GTTAGTAGTTGTTGGTTAGA+AGG - tig0020882:96694-96713 None:intergenic 35.0%
GAGTGAGAGGAAATTAGTAA+AGG - tig0020882:96738-96757 None:intergenic 35.0%
! TCTCACTCCTTACTCTTTTT+CGG + tig0020882:96750-96769 Msa1387200:intron 35.0%
TTCCCATTAGACATGTAAAG+AGG - tig0020882:96779-96798 None:intergenic 35.0%
TTTCCAGATTGAAGCAAAGA+TGG + tig0020882:96932-96951 Msa1387200:intron 35.0%
TATCCATCTTTGCTTCAATC+TGG - tig0020882:96938-96957 None:intergenic 35.0%
ACAAGTGAAAGAGCTCATAA+GGG + tig0020882:96975-96994 Msa1387200:CDS 35.0%
GGTTGAGAACAAACAGAAAA+GGG + tig0020882:97361-97380 Msa1387200:intron 35.0%
TCAGTGATGCATGTATACAT+TGG + tig0020882:97691-97710 Msa1387200:intron 35.0%
CAGTGATGCATGTATACATT+GGG + tig0020882:97692-97711 Msa1387200:intron 35.0%
ATAAAAATGCACAAACTCGG+AGG - tig0020882:97857-97876 None:intergenic 35.0%
TTTGTTGGGAGAATGAACTA+TGG + tig0020882:98016-98035 Msa1387200:intron 35.0%
TGAAGATCTTAGGTGAAAAG+GGG - tig0020882:98140-98159 None:intergenic 35.0%
AGAATTGTCAGAAGAAGCAA+AGG - tig0020882:98182-98201 None:intergenic 35.0%
TCTTCTGACAATTCTTCAGA+CGG + tig0020882:98187-98206 Msa1387200:intron 35.0%
AAGAGTCGCAATGTCATATA+GGG - tig0020882:98640-98659 None:intergenic 35.0%
TAAGAGTCGCAATGTCATAT+AGG - tig0020882:98641-98660 None:intergenic 35.0%
GACTATGAAAGTAAGAGAGT+TGG - tig0020882:98689-98708 None:intergenic 35.0%
AAACAGTACAGTTGAAAGCA+TGG - tig0020882:98737-98756 None:intergenic 35.0%
! GTAGACTTTTTGCATAGGAT+TGG + tig0020882:98869-98888 Msa1387200:CDS 35.0%
TTATCGTTGTCGAAGTTACA+AGG - tig0020882:99694-99713 None:intergenic 35.0%
! CAAAATGATGGTTACTGGTT+AGG - tig0020882:99723-99742 None:intergenic 35.0%
CAGTGGCTTTCTTCTTAAAT+TGG - tig0020882:99818-99837 None:intergenic 35.0%
CAATTTAAGAAGAAAGCCAC+TGG + tig0020882:99816-99835 Msa1387200:three_prime_UTR 35.0%
AGCTAGAGGGAACTTTAATT+AGG - tig0020882:99968-99987 None:intergenic 35.0%
GAAAGCTAATGTCTATCAAG+AGG - tig0020882:100078-100097 None:intergenic 35.0%
! GTCAAAAGTTTTTGCTCAGA+TGG - tig0020882:100191-100210 None:intergenic 35.0%
TGAAAAAGCCCAGTATTCAA+AGG - tig0020882:100219-100238 None:intergenic 35.0%
!!! ATACTGGGCTTTTTCAATGA+TGG + tig0020882:100223-100242 Msa1387200:three_prime_UTR 35.0%
! AAGTATTGTCAACAGGAAGT+GGG - tig0020882:100294-100313 None:intergenic 35.0%
ATTTAAGGACTGATGGTATG+CGG - tig0020882:100417-100436 None:intergenic 35.0%
CTCAGTAATTTAAGGACTGA+TGG - tig0020882:100424-100443 None:intergenic 35.0%
AGTCCTTAAATTACTGAGAC+TGG + tig0020882:100426-100445 Msa1387200:three_prime_UTR 35.0%
TTTGTATGGAGTTGTATCCT+GGG - tig0020882:100495-100514 None:intergenic 35.0%
ATTTGTATGGAGTTGTATCC+TGG - tig0020882:100496-100515 None:intergenic 35.0%
!! ATTTCCTATGCTATTTCTGC+AGG - tig0020882:100529-100548 None:intergenic 35.0%
AAGGAAAGAAGGAAATCTAG+AGG - tig0020882:100622-100641 None:intergenic 35.0%
TGGAAATGAACCCCATTAAT+TGG + tig0020882:100675-100694 Msa1387200:intron 35.0%
!! GTTGATGATGCCAATTAATG+GGG - tig0020882:100688-100707 None:intergenic 35.0%
AAAAGACACTTTCTTTGCCG+AGG + tig0020882:91694-91713 Msa1387200:CDS 40.0%
ATTAGAGAGAGCTCGAGAAA+GGG - tig0020882:91756-91775 None:intergenic 40.0%
TATTAGAGAGAGCTCGAGAA+AGG - tig0020882:91757-91776 None:intergenic 40.0%
TGGTATTTGTCGCTAGCATA+CGG - tig0020882:92070-92089 None:intergenic 40.0%
GTCAAGAACGAAATTGGGTA+AGG + tig0020882:92242-92261 Msa1387200:intron 40.0%
TTCTTGTTCTGTGTGTGTAC+AGG + tig0020882:92394-92413 Msa1387200:intron 40.0%
TCTATACCATCTGTGTTGTC+AGG + tig0020882:92422-92441 Msa1387200:CDS 40.0%
TTCCTCTCATTGATAAGCTG+AGG + tig0020882:92501-92520 Msa1387200:CDS 40.0%
TCCTCTCATTGATAAGCTGA+GGG + tig0020882:92502-92521 Msa1387200:CDS 40.0%
TGCTCACACAATTGCACATT+CGG - tig0020882:92608-92627 None:intergenic 40.0%
AATTGTGTGAGCAGGTAGTT+AGG + tig0020882:92615-92634 Msa1387200:intron 40.0%
!!! AATCTTTTTTGGACCAGGGA+TGG + tig0020882:92856-92875 Msa1387200:intron 40.0%
ATGATATCAGGTTCCCGAAT+TGG - tig0020882:92882-92901 None:intergenic 40.0%
! GGTGTTGTCACAATGATATC+AGG - tig0020882:92894-92913 None:intergenic 40.0%
CACCATGCATAAATTCCATG+CGG - tig0020882:92956-92975 None:intergenic 40.0%
!! TCAGGCGGATTACTTTATTC+TGG - tig0020882:93140-93159 None:intergenic 40.0%
ATCAGAGTTACCAGTGACAT+CGG + tig0020882:93212-93231 Msa1387200:intron 40.0%
AAAGAAGATTCCGATGTCAC+TGG - tig0020882:93225-93244 None:intergenic 40.0%
! TTTTGTTGCAGCTACACTTC+CGG + tig0020882:93422-93441 Msa1387200:intron 40.0%
!! GCTGTTTTCTTTCCATTCAC+CGG - tig0020882:93444-93463 None:intergenic 40.0%
GGTGAATGGAAAGAAAACAG+CGG + tig0020882:93443-93462 Msa1387200:CDS 40.0%
GTGAATGGAAAGAAAACAGC+GGG + tig0020882:93444-93463 Msa1387200:CDS 40.0%
TTGGTATTCAGCTTCTGTCA+TGG + tig0020882:93600-93619 Msa1387200:intron 40.0%
AGCTTCTGTCATGGTCAATT+AGG + tig0020882:93609-93628 Msa1387200:intron 40.0%
GGGACATCAAATTAGGAAAG+TGG + tig0020882:93645-93664 Msa1387200:intron 40.0%
! GTGGTCGTATATCTTTTTGG+TGG + tig0020882:93679-93698 Msa1387200:intron 40.0%
TGCACTGTCAATAATGTGAC+AGG + tig0020882:93712-93731 Msa1387200:intron 40.0%
TGTGATTCAGCTACAAGAGA+GGG - tig0020882:94103-94122 None:intergenic 40.0%
TCTCTTGTAGCTGAATCACA+CGG + tig0020882:94103-94122 Msa1387200:intron 40.0%
AGTCTATACTGGGAGAAAGA+GGG - tig0020882:94176-94195 None:intergenic 40.0%
AAGTCTATACTGGGAGAAAG+AGG - tig0020882:94177-94196 None:intergenic 40.0%
GCATCTGGAAAGTCTATACT+GGG - tig0020882:94186-94205 None:intergenic 40.0%
AGCATCTGGAAAGTCTATAC+TGG - tig0020882:94187-94206 None:intergenic 40.0%
AGTATAGACTTTCCAGATGC+TGG + tig0020882:94186-94205 Msa1387200:intron 40.0%
GTATAGACTTTCCAGATGCT+GGG + tig0020882:94187-94206 Msa1387200:intron 40.0%
! TCATCATGCTTGTTAATCCC+AGG + tig0020882:94238-94257 Msa1387200:intron 40.0%
! CATCATGCTTGTTAATCCCA+GGG + tig0020882:94239-94258 Msa1387200:intron 40.0%
! ATCATGCTTGTTAATCCCAG+GGG + tig0020882:94240-94259 Msa1387200:intron 40.0%
AGTTCTCCATCAAGAATGGT+AGG - tig0020882:94267-94286 None:intergenic 40.0%
AACCTGTCCTATAGCTAAGT+TGG + tig0020882:94528-94547 Msa1387200:intron 40.0%
TTTACTTGCTTCAATCCCAG+GGG - tig0020882:94652-94671 None:intergenic 40.0%
! CTTTTACTTGCTTCAATCCC+AGG - tig0020882:94654-94673 None:intergenic 40.0%
! AGGGGATTTTTCTCATTTGG+TGG + tig0020882:94685-94704 Msa1387200:intron 40.0%
TGTTCTCGATGTCCTATCTA+AGG + tig0020882:94713-94732 Msa1387200:intron 40.0%
ATAGCATGCCAACCTTAGAT+AGG - tig0020882:94728-94747 None:intergenic 40.0%
TGCAACTTCTGATACTTTGG+TGG + tig0020882:94757-94776 Msa1387200:intron 40.0%
TATCTAATCTAGGCACGTAC+TGG + tig0020882:94893-94912 Msa1387200:intron 40.0%
ACTGACACATCTTACACGAA+AGG - tig0020882:94968-94987 None:intergenic 40.0%
AGATACCTCAAATCATGGTC+TGG - tig0020882:95061-95080 None:intergenic 40.0%
TGTTTAGTTAGAAACCCCCA+TGG - tig0020882:95097-95116 None:intergenic 40.0%
TTTCTTATGGAACATTGGGC+TGG - tig0020882:95243-95262 None:intergenic 40.0%
AGCTTATTCACAGTTCCTAG+AGG - tig0020882:95287-95306 None:intergenic 40.0%
CCATTAAGGTAGAGTCTGTA+AGG - tig0020882:95432-95451 None:intergenic 40.0%
CCTTACAGACTCTACCTTAA+TGG + tig0020882:95429-95448 Msa1387200:intron 40.0%
GGTTTAGATTTCTGCATACC+CGG - tig0020882:95672-95691 None:intergenic 40.0%
GGTGGATATGATGCTAAAGA+TGG - tig0020882:95782-95801 None:intergenic 40.0%
! CATCATATCCACCTTCCTTT+TGG + tig0020882:95789-95808 Msa1387200:intron 40.0%
GGTGAAATGTTAAGAACCAG+GGG - tig0020882:95923-95942 None:intergenic 40.0%
GGGTGAAATGTTAAGAACCA+GGG - tig0020882:95924-95943 None:intergenic 40.0%
TGGGTGAAATGTTAAGAACC+AGG - tig0020882:95925-95944 None:intergenic 40.0%
TATTAGTAAGTAAGGTGGCC+TGG + tig0020882:96201-96220 Msa1387200:intron 40.0%
CTCCCAGAAAAGATTCATGA+AGG + tig0020882:96418-96437 Msa1387200:intron 40.0%
AATACCACATAGGTAGTTCG+AGG + tig0020882:96591-96610 Msa1387200:intron 40.0%
GAAGGGAGACTATCAGTAAT+AGG - tig0020882:96676-96695 None:intergenic 40.0%
GAAAAAGAGTAAGGAGTGAG+AGG - tig0020882:96751-96770 None:intergenic 40.0%
GAGGAAACCGAAAAAGAGTA+AGG - tig0020882:96760-96779 None:intergenic 40.0%
! GAAGACACTGTTTTCCAGTA+GGG - tig0020882:96870-96889 None:intergenic 40.0%
! TGAAGACACTGTTTTCCAGT+AGG - tig0020882:96871-96890 None:intergenic 40.0%
CACAAGTGAAAGAGCTCATA+AGG + tig0020882:96974-96993 Msa1387200:CDS 40.0%
! TCGGAAGATTTGGATAATGG+TGG + tig0020882:97018-97037 Msa1387200:CDS 40.0%
! GAAGATTTGGATAATGGTGG+TGG + tig0020882:97021-97040 Msa1387200:CDS 40.0%
TGGTGGCATTCATAGAACAA+TGG + tig0020882:97038-97057 Msa1387200:CDS 40.0%
TGAAGCTGTGGTGAAGATAT+TGG + tig0020882:97086-97105 Msa1387200:intron 40.0%
GAAGCTGTGGTGAAGATATT+GGG + tig0020882:97087-97106 Msa1387200:intron 40.0%
TGAAGATATTGGGCTATGCT+GGG + tig0020882:97097-97116 Msa1387200:intron 40.0%
! GTTGATTTCTACGACAAAGG+TGG + tig0020882:97177-97196 Msa1387200:CDS 40.0%
GGGTTGAGAACAAACAGAAA+AGG + tig0020882:97360-97379 Msa1387200:intron 40.0%
TGAGAACAAACAGAAAAGGG+AGG + tig0020882:97364-97383 Msa1387200:intron 40.0%
! GTGGAAAAGGTGGTGTTAAT+TGG - tig0020882:97505-97524 None:intergenic 40.0%
!! TAGGAAAGCATCTCCTACAT+AGG + tig0020882:97637-97656 Msa1387200:intron 40.0%
!! AGGAAAGCATCTCCTACATA+GGG + tig0020882:97638-97657 Msa1387200:intron 40.0%
AACTCACCTATTCCCTATGT+AGG - tig0020882:97653-97672 None:intergenic 40.0%
TACATGCATCACTGAGCAAA+TGG - tig0020882:97686-97705 None:intergenic 40.0%
TCTTCATGATCAGAGCTAGT+TGG + tig0020882:97951-97970 Msa1387200:intron 40.0%
TGGAGAAGGGAAAGGAAATT+GGG + tig0020882:98221-98240 Msa1387200:intron 40.0%
GAGAGATGGGATAGAAGAAA+AGG + tig0020882:98382-98401 Msa1387200:intron 40.0%
AAGAGAGTTGGATACATGCA+TGG - tig0020882:98677-98696 None:intergenic 40.0%
CAATGTTGTGCATGTGTTTC+AGG + tig0020882:98826-98845 Msa1387200:intron 40.0%
! CTGCTGTAGACTTTTTGCAT+AGG + tig0020882:98864-98883 Msa1387200:CDS 40.0%
TACAAGCTCTCTGTTGGATT+CGG - tig0020882:98942-98961 None:intergenic 40.0%
! GCTTCTTTTCCTGCTAAATG+CGG - tig0020882:99246-99265 None:intergenic 40.0%
CTAATCTTAGAGATCCTCCA+AGG - tig0020882:99541-99560 None:intergenic 40.0%
!!! GGCTTTTTCAATGATGGAAG+TGG + tig0020882:100229-100248 Msa1387200:three_prime_UTR 40.0%
GGTCCTCTATTCTTCTTGAA+AGG - tig0020882:100268-100287 None:intergenic 40.0%
! CAAGTATTGTCAACAGGAAG+TGG - tig0020882:100295-100314 None:intergenic 40.0%
CACTTCCTGTTGACAATACT+TGG + tig0020882:100293-100312 Msa1387200:three_prime_UTR 40.0%
! ATCGACCAAGTATTGTCAAC+AGG - tig0020882:100301-100320 None:intergenic 40.0%
CCTCCAGTCTCAGTAATTTA+AGG - tig0020882:100432-100451 None:intergenic 40.0%
CCTTAAATTACTGAGACTGG+AGG + tig0020882:100429-100448 Msa1387200:three_prime_UTR 40.0%
! CTGGGTTTGCTTTATATCGT+GGG - tig0020882:100477-100496 None:intergenic 40.0%
AGGAGGATGGATCATTTGTA+TGG - tig0020882:100509-100528 None:intergenic 40.0%
GCATCATCAACAATGTTACC+CGG + tig0020882:100697-100716 Msa1387200:intron 40.0%
ACTCCACGAAACGTTATCCT+CGG - tig0020882:91714-91733 None:intergenic 45.0%
AACGTTTCGTGGAGTTCACT+TGG + tig0020882:91719-91738 Msa1387200:CDS 45.0%
GAAATGACCTGAACGAGAGA+GGG - tig0020882:91794-91813 None:intergenic 45.0%
AGAAATGACCTGAACGAGAG+AGG - tig0020882:91795-91814 None:intergenic 45.0%
TAGGCTGGACATCTTTATCC+GGG - tig0020882:92127-92146 None:intergenic 45.0%
CTAGGCTGGACATCTTTATC+CGG - tig0020882:92128-92147 None:intergenic 45.0%
ACCATCTGTGTTGTCAGGAA+AGG + tig0020882:92427-92446 Msa1387200:CDS 45.0%
TCCTTTCCTGACAACACAGA+TGG - tig0020882:92431-92450 None:intergenic 45.0%
GTAGTTATTGCTGCAGAGAC+CGG + tig0020882:92452-92471 Msa1387200:CDS 45.0%
ACTGTATGTCTTACCACTGC+CGG - tig0020882:92474-92493 None:intergenic 45.0%
CCTCTCATTGATAAGCTGAG+GGG + tig0020882:92503-92522 Msa1387200:CDS 45.0%
GGGTACAGAGGAATATTCTC+TGG + tig0020882:92523-92542 Msa1387200:CDS 45.0%
TGATAAAGAAGTCTCTCCGC+CGG + tig0020882:92556-92575 Msa1387200:CDS 45.0%
GAATGTGCAATTGTGTGAGC+AGG + tig0020882:92607-92626 Msa1387200:intron 45.0%
AGGATGGCTAATAGTCTTCG+TGG + tig0020882:92635-92654 Msa1387200:CDS 45.0%
AATGGCTGCAGCACTAACAA+TGG - tig0020882:92675-92694 None:intergenic 45.0%
TTAGTGCTGCAGCCATTTGT+GGG + tig0020882:92678-92697 Msa1387200:CDS 45.0%
CACTACCTGTTTCCCACAAA+TGG - tig0020882:92693-92712 None:intergenic 45.0%
ACATGATTGAGAAGAGCAGC+AGG - tig0020882:92915-92934 None:intergenic 45.0%
AAGCTGATATGCTCCTCTGT+GGG + tig0020882:93109-93128 Msa1387200:CDS 45.0%
! CATAGCGGAGCAAGTTAATC+AGG - tig0020882:93158-93177 None:intergenic 45.0%
TGATGCTTCAGAAGGTGAAG+AGG + tig0020882:93254-93273 Msa1387200:intron 45.0%
TCGTCTGACATGGCTTCAAT+TGG - tig0020882:93285-93304 None:intergenic 45.0%
AATTGAAGCCATGTCAGACG+AGG + tig0020882:93284-93303 Msa1387200:CDS 45.0%
ACATGTTTCCTGATGCTGAG+TGG + tig0020882:93481-93500 Msa1387200:CDS 45.0%
CATGTTTCCTGATGCTGAGT+GGG + tig0020882:93482-93501 Msa1387200:CDS 45.0%
AGGGGGAAAATATAGCACCT+TGG - tig0020882:93537-93556 None:intergenic 45.0%
ATCCACCGGGACATCAAATT+AGG + tig0020882:93638-93657 Msa1387200:intron 45.0%
TTCCTAATTTGATGTCCCGG+TGG - tig0020882:93643-93662 None:intergenic 45.0%
GGAGAGAATATCTCCTGGTT+AGG - tig0020882:94038-94057 None:intergenic 45.0%
GGTTAGGAGAGAATATCTCC+TGG - tig0020882:94043-94062 None:intergenic 45.0%
TTCAGCTACAAGAGAGGGAA+GGG - tig0020882:94098-94117 None:intergenic 45.0%
ATTCAGCTACAAGAGAGGGA+AGG - tig0020882:94099-94118 None:intergenic 45.0%
GTGTGATTCAGCTACAAGAG+AGG - tig0020882:94104-94123 None:intergenic 45.0%
TATACTGGGAGAAAGAGGGT+GGG - tig0020882:94172-94191 None:intergenic 45.0%
!!! TGTGACTTTTAGCTCACGAC+AGG + tig0020882:94351-94370 Msa1387200:intron 45.0%
ATGTTTACTCGATGGAAGGG+AGG - tig0020882:94437-94456 None:intergenic 45.0%
GGCATGTTTACTCGATGGAA+GGG - tig0020882:94440-94459 None:intergenic 45.0%
TGGCATGTTTACTCGATGGA+AGG - tig0020882:94441-94460 None:intergenic 45.0%
CGAATGGCATGTTTACTCGA+TGG - tig0020882:94445-94464 None:intergenic 45.0%
ACATGCCATTCGTTGTCTCT+TGG + tig0020882:94453-94472 Msa1387200:intron 45.0%
TTGAGCCAAGAGACAACGAA+TGG - tig0020882:94461-94480 None:intergenic 45.0%
! TTGGCTCAACTAGTCTCCAA+AGG + tig0020882:94472-94491 Msa1387200:intron 45.0%
AGCCAACTTAGCTATAGGAC+AGG - tig0020882:94533-94552 None:intergenic 45.0%
!! CTCGCTGCTTTGGAGAATTT+GGG + tig0020882:94574-94593 Msa1387200:intron 45.0%
! CTCGATGTCCTATCTAAGGT+TGG + tig0020882:94717-94736 Msa1387200:intron 45.0%
TAAGGTTGGCATGCTATGCT+AGG + tig0020882:94731-94750 Msa1387200:intron 45.0%
! TGAGGTATCTAAAAGGAGCC+AGG + tig0020882:95071-95090 Msa1387200:intron 45.0%
AGGTAGAGTCTGTAAGGCTT+GGG - tig0020882:95426-95445 None:intergenic 45.0%
AAGGTAGAGTCTGTAAGGCT+TGG - tig0020882:95427-95446 None:intergenic 45.0%
TGTGTCTGTGTGTGTGGAAT+GGG - tig0020882:95455-95474 None:intergenic 45.0%
ATGTGTCTGTGTGTGTGGAA+TGG - tig0020882:95456-95475 None:intergenic 45.0%
TCCACACACACAGACACATA+TGG + tig0020882:95457-95476 Msa1387200:intron 45.0%
CCACACACACAGACACATAT+GGG + tig0020882:95458-95477 Msa1387200:intron 45.0%
CACACACACAGACACATATG+GGG + tig0020882:95459-95478 Msa1387200:intron 45.0%
GGGGAGAAATTGAAGGTTGT+GGG - tig0020882:95621-95640 None:intergenic 45.0%
AGGGGAGAAATTGAAGGTTG+TGG - tig0020882:95622-95641 None:intergenic 45.0%
GAGAGAAGGGGAGAAATTGA+AGG - tig0020882:95628-95647 None:intergenic 45.0%
ATGTTAAGAACCAGGGGCAA+TGG - tig0020882:95917-95936 None:intergenic 45.0%
AGGATCAGAAACTCAATCGG+TGG + tig0020882:96024-96043 Msa1387200:intron 45.0%
GGATCAGAAACTCAATCGGT+GGG + tig0020882:96025-96044 Msa1387200:intron 45.0%
TCTCCTTCAAAATGTTGGCC+AGG - tig0020882:96222-96241 None:intergenic 45.0%
! TTAGCTCTCGACACTCAAGT+TGG - tig0020882:96519-96538 None:intergenic 45.0%
AGTTCCTCGAACTACCTATG+TGG - tig0020882:96598-96617 None:intergenic 45.0%
TTGTGATATCCAACCCATCC+CGG + tig0020882:96844-96863 Msa1387200:intron 45.0%
TTCAACAGCCTCAACTGTGT+TGG - tig0020882:97070-97089 None:intergenic 45.0%
GTGAAGATATTGGGCTATGC+TGG + tig0020882:97096-97115 Msa1387200:intron 45.0%
AGAATTGCACGTTGGATGAG+CGG + tig0020882:97142-97161 Msa1387200:CDS 45.0%
! AACACCACCTTTTCCACTTG+CGG + tig0020882:97508-97527 Msa1387200:intron 45.0%
TCAATGTCCGCAAGTGGAAA+AGG - tig0020882:97518-97537 None:intergenic 45.0%
TCACAATCAATGTCCGCAAG+TGG - tig0020882:97524-97543 None:intergenic 45.0%
GCATCTCCTACATAGGGAAT+AGG + tig0020882:97644-97663 Msa1387200:intron 45.0%
ATCACTGAGCAAATGGTGCA+CGG - tig0020882:97679-97698 None:intergenic 45.0%
AAACGACAAAGGGTGGTGAA+GGG - tig0020882:97780-97799 None:intergenic 45.0%
GATTGACAAACGACAAAGGG+TGG - tig0020882:97787-97806 None:intergenic 45.0%
AAACCTGCTTCTTTCGCTCA+CGG - tig0020882:97925-97944 None:intergenic 45.0%
GCGAAAGAAGCAGGTTTCTA+CGG + tig0020882:97928-97947 Msa1387200:intron 45.0%
ATTTCCTTTCCCTTCTCCAC+TGG - tig0020882:98220-98239 None:intergenic 45.0%
GTGGAGAAGGGAAAGGAAAT+TGG + tig0020882:98220-98239 Msa1387200:intron 45.0%
GGAGAAGGGAAAGGAAATTG+GGG + tig0020882:98222-98241 Msa1387200:intron 45.0%
ATCATGCTTGTACAGAGACG+AGG + tig0020882:98263-98282 Msa1387200:intron 45.0%
GGAGATGGAGTTGTGATTGT+GGG + tig0020882:98360-98379 Msa1387200:intron 45.0%
AGTTGTGATTGTGGGAGAGA+TGG + tig0020882:98368-98387 Msa1387200:intron 45.0%
GTTGTGATTGTGGGAGAGAT+GGG + tig0020882:98369-98388 Msa1387200:intron 45.0%
! TCACACGATGGTCTCTCTTT+TGG + tig0020882:98519-98538 Msa1387200:intron 45.0%
TGCTGGTAACTAGTCCGATT+TGG - tig0020882:98913-98932 None:intergenic 45.0%
! GTTGGATTCGGTATACATGC+TGG - tig0020882:98930-98949 None:intergenic 45.0%
AGCATCTACAAGCTCTCTGT+TGG - tig0020882:98948-98967 None:intergenic 45.0%
CGCTGTAAGACTCTCTTCAA+TGG - tig0020882:99785-99804 None:intergenic 45.0%
CTTCAATAGAGCAACTCCAG+TGG - tig0020882:99835-99854 None:intergenic 45.0%
AGTAACTTGGGACAGCTAGA+GGG - tig0020882:99981-100000 None:intergenic 45.0%
AGAGGGTTCATTTCACCTAC+TGG - tig0020882:100060-100079 None:intergenic 45.0%
TTCACCTCTTGGATGACATC+AGG + tig0020882:100160-100179 Msa1387200:three_prime_UTR 45.0%
GAAACCTGATGTCATCCAAG+AGG - tig0020882:100167-100186 None:intergenic 45.0%
TGACCCTTGCCTTTGAATAC+TGG + tig0020882:100207-100226 Msa1387200:three_prime_UTR 45.0%
GACCCTTGCCTTTGAATACT+GGG + tig0020882:100208-100227 Msa1387200:three_prime_UTR 45.0%
AGCCCAGTATTCAAAGGCAA+GGG - tig0020882:100213-100232 None:intergenic 45.0%
AAGCCCAGTATTCAAAGGCA+AGG - tig0020882:100214-100233 None:intergenic 45.0%
TTGTCAACAGGAAGTGGGAA+AGG - tig0020882:100289-100308 None:intergenic 45.0%
! CCTGGGTTTGCTTTATATCG+TGG - tig0020882:100478-100497 None:intergenic 45.0%
CCACGATATAAAGCAAACCC+AGG + tig0020882:100475-100494 Msa1387200:three_prime_UTR 45.0%
!! ATGCTATTTCTGCAGGAGGA+TGG - tig0020882:100522-100541 None:intergenic 45.0%
TCCTCCTGCAGAAATAGCAT+AGG + tig0020882:100522-100541 Msa1387200:intron 45.0%
!! TCCTATGCTATTTCTGCAGG+AGG - tig0020882:100526-100545 None:intergenic 45.0%
!! AAGTTTAATTATAAAAATAT+GGG - tig0020882:97609-97628 None:intergenic 5.0%
!! TAAGTTTAATTATAAAAATA+TGG - tig0020882:97610-97629 None:intergenic 5.0%
!!! ATTTTTATAATTAAACTTAT+AGG + tig0020882:97611-97630 Msa1387200:intron 5.0%
CTGCTGTGTTTGACGTGGAA+GGG - tig0020882:91627-91646 None:intergenic 50.0%
TCTGCTGTGTTTGACGTGGA+AGG - tig0020882:91628-91647 None:intergenic 50.0%
TGTGTCTGCTGTGTTTGACG+TGG - tig0020882:91632-91651 None:intergenic 50.0%
CAGCAGACACAACCCTTTGT+TGG + tig0020882:91641-91660 Msa1387200:intron 50.0%
GAAACGGCGCTTCCAACAAA+GGG - tig0020882:91656-91675 None:intergenic 50.0%
TGAAACGGCGCTTCCAACAA+AGG - tig0020882:91657-91676 None:intergenic 50.0%
TTGCCGAGGATAACGTTTCG+TGG + tig0020882:91708-91727 Msa1387200:CDS 50.0%
CAATACACCCTCTCTCGTTC+AGG + tig0020882:91784-91803 Msa1387200:CDS 50.0%
CCCCTCAGCTTATCAATGAG+AGG - tig0020882:92506-92525 None:intergenic 50.0%
! TGATAAGCTGAGGGGTACAG+AGG + tig0020882:92511-92530 Msa1387200:CDS 50.0%
AAGCACGAGCAGAACTTTCC+TGG - tig0020882:92582-92601 None:intergenic 50.0%
GTGTGAGCAGGTAGTTAGGA+TGG + tig0020882:92619-92638 Msa1387200:intron 50.0%
GTTAGTGCTGCAGCCATTTG+TGG + tig0020882:92677-92696 Msa1387200:CDS 50.0%
TGCAGCCATTTGTGGGAAAC+AGG + tig0020882:92685-92704 Msa1387200:CDS 50.0%
CGCCGCATGGAATTTATGCA+TGG + tig0020882:92951-92970 Msa1387200:CDS 50.0%
GAAGCTGATATGCTCCTCTG+TGG + tig0020882:93108-93127 Msa1387200:CDS 50.0%
! TATTCTGGAAGCTCCCACAG+AGG - tig0020882:93125-93144 None:intergenic 50.0%
AGCGGAGCAAGTTAATCAGG+CGG - tig0020882:93155-93174 None:intergenic 50.0%
TCGTCGCATGATGCTTCAGA+AGG + tig0020882:93246-93265 Msa1387200:intron 50.0%
ATCATCCTCCTCGTCTGACA+TGG - tig0020882:93295-93314 None:intergenic 50.0%
ATGTCAGACGAGGAGGATGA+TGG + tig0020882:93294-93313 Msa1387200:CDS 50.0%
GAAGAGACTGGAGAAGAGTG+AGG + tig0020882:93370-93389 Msa1387200:CDS 50.0%
GAAAGTGGTCAGTGCATCAG+TGG + tig0020882:93660-93679 Msa1387200:intron 50.0%
TGGTTAGGAGTCTCAGACTC+TGG - tig0020882:94023-94042 None:intergenic 50.0%
! AGAGTCTGAGACTCCTAACC+AGG + tig0020882:94022-94041 Msa1387200:intron 50.0%
AGAAAGAGGGTGGGACTGAA+GGG - tig0020882:94163-94182 None:intergenic 50.0%
CTATACTGGGAGAAAGAGGG+TGG - tig0020882:94173-94192 None:intergenic 50.0%
GTACATATAGGCCCAGCATC+TGG - tig0020882:94201-94220 None:intergenic 50.0%
GATGCTGGGCCTATATGTAC+TGG + tig0020882:94201-94220 Msa1387200:intron 50.0%
TCAAGAATGGTAGGACCCCT+GGG - tig0020882:94258-94277 None:intergenic 50.0%
ATCAAGAATGGTAGGACCCC+TGG - tig0020882:94259-94278 None:intergenic 50.0%
AGGGGTCCTACCATTCTTGA+TGG + tig0020882:94258-94277 Msa1387200:intron 50.0%
!!! GACTTTTAGCTCACGACAGG+TGG + tig0020882:94354-94373 Msa1387200:intron 50.0%
!!! TTTTAGCTCACGACAGGTGG+TGG + tig0020882:94357-94376 Msa1387200:intron 50.0%
!! GCTCGCTGCTTTGGAGAATT+TGG + tig0020882:94573-94592 Msa1387200:intron 50.0%
AGGAGCCAGACCATGATTTG+AGG + tig0020882:95053-95072 Msa1387200:intron 50.0%
ATCTAAAAGGAGCCAGGCCA+TGG + tig0020882:95077-95096 Msa1387200:intron 50.0%
TCTAAAAGGAGCCAGGCCAT+GGG + tig0020882:95078-95097 Msa1387200:intron 50.0%
! GGTTTGACTCGTTGAGCGTT+TGG + tig0020882:95328-95347 Msa1387200:intron 50.0%
GTGTGTGGAATGGGCCATTA+AGG - tig0020882:95446-95465 None:intergenic 50.0%
CCCATATGTGTCTGTGTGTG+TGG - tig0020882:95461-95480 None:intergenic 50.0%
TAAGAACCAGGGGCAATGGA+AGG - tig0020882:95913-95932 None:intergenic 50.0%
GAAACTCAATCGGTGGGACA+TGG + tig0020882:96031-96050 Msa1387200:intron 50.0%
! TGGCCTGGCCAACATTTTGA+AGG + tig0020882:96216-96235 Msa1387200:intron 50.0%
! ACACTGTTTTCCAGTAGGGC+CGG - tig0020882:96866-96885 None:intergenic 50.0%
GGTGTTTGCCAACACAGTTG+AGG + tig0020882:97059-97078 Msa1387200:CDS 50.0%
AGTTGAGGCTGTTGAAGCTG+TGG + tig0020882:97074-97093 Msa1387200:CDS 50.0%
GAATTGCACGTTGGATGAGC+GGG + tig0020882:97143-97162 Msa1387200:CDS 50.0%
ATGTCCGCAAGTGGAAAAGG+TGG - tig0020882:97515-97534 None:intergenic 50.0%
TCACTGAGCAAATGGTGCAC+GGG - tig0020882:97678-97697 None:intergenic 50.0%
ACAAAGGGTGGTGAAGGGAA+TGG - tig0020882:97775-97794 None:intergenic 50.0%
CAAACGACAAAGGGTGGTGA+AGG - tig0020882:97781-97800 None:intergenic 50.0%
AGGGAAAGGAAATTGGGGAG+TGG + tig0020882:98227-98246 Msa1387200:intron 50.0%
AGATGGAGTTGTACGAGGCA+GGG + tig0020882:98315-98334 Msa1387200:intron 50.0%
AGCACGGAGGGATGATTGAA+GGG + tig0020882:98339-98358 Msa1387200:intron 50.0%
GAGGGATGATTGAAGGGAGA+TGG + tig0020882:98345-98364 Msa1387200:intron 50.0%
GGGAGATGGAGTTGTGATTG+TGG + tig0020882:98359-98378 Msa1387200:intron 50.0%
ATTGGTCGTACAGCTAGAGC+TGG + tig0020882:98887-98906 Msa1387200:CDS 50.0%
ACAGCTAGAGCTGGCCAAAT+CGG + tig0020882:98896-98915 Msa1387200:CDS 50.0%
TAGATGCTGTTCGTCGTGCA+GGG + tig0020882:98960-98979 Msa1387200:CDS 50.0%
CAGTAACTTGGGACAGCTAG+AGG - tig0020882:99982-100001 None:intergenic 50.0%
CACACCACTACATCTCACTG+AGG + tig0020882:100015-100034 Msa1387200:three_prime_UTR 50.0%
CTCACCTCAGTGAGATGTAG+TGG - tig0020882:100022-100041 None:intergenic 50.0%
CGGTGGAAGGATCTGAGTAA+TGG - tig0020882:100397-100416 None:intergenic 50.0%
TAAGGACTGATGGTATGCGG+TGG - tig0020882:100414-100433 None:intergenic 50.0%
AAGAAAGCCGCCTAATAGCC+CGG + tig0020882:100814-100833 Msa1387200:three_prime_UTR 50.0%
ACGAGCAGAACTTTCCTGGC+CGG - tig0020882:92578-92597 None:intergenic 55.0%
TGGACCAGGGATGGCCAATT+CGG + tig0020882:92865-92884 Msa1387200:intron 55.0%
! CGTTGATAGAAGACGCCGCA+TGG + tig0020882:92938-92957 Msa1387200:CDS 55.0%
TGAAGCCATGTCAGACGAGG+AGG + tig0020882:93287-93306 Msa1387200:CDS 55.0%
! CGAGGAGGATGATGGTAACG+AGG + tig0020882:93302-93321 Msa1387200:CDS 55.0%
GCAGCTACACTTCCGGTGAA+TGG + tig0020882:93429-93448 Msa1387200:intron 55.0%
CCACTAACCCACTCAGCATC+AGG - tig0020882:93492-93511 None:intergenic 55.0%
!! CCTGATGCTGAGTGGGTTAG+TGG + tig0020882:93489-93508 Msa1387200:CDS 55.0%
GAAAGAGGGTGGGACTGAAG+GGG - tig0020882:94162-94181 None:intergenic 55.0%
GAGAAAGAGGGTGGGACTGA+AGG - tig0020882:94164-94183 None:intergenic 55.0%
CTAAAAGGAGCCAGGCCATG+GGG + tig0020882:95079-95098 Msa1387200:intron 55.0%
TAAAAGGAGCCAGGCCATGG+GGG + tig0020882:95080-95099 Msa1387200:intron 55.0%
AGTTAGAAACCCCCATGGCC+TGG - tig0020882:95092-95111 None:intergenic 55.0%
GAGTCTGTAAGGCTTGGGCT+AGG - tig0020882:95421-95440 None:intergenic 55.0%
AACCAGGGGCAATGGAAGGT+GGG - tig0020882:95909-95928 None:intergenic 55.0%
ACATGGCAGTGATCGTGCGT+TGG + tig0020882:96048-96067 Msa1387200:intron 55.0%
! TTTTCCAGTAGGGCCGGGAT+GGG - tig0020882:96860-96879 None:intergenic 55.0%
! CACTGTTTTCCAGTAGGGCC+GGG - tig0020882:96865-96884 None:intergenic 55.0%
! TGTACTGATGCAGCTGCTCG+TGG + tig0020882:97210-97229 Msa1387200:CDS 55.0%
AGAGCTGGGGAAGGAGTTAG+CGG - tig0020882:97741-97760 None:intergenic 55.0%
TGAAGGGAATGGAGAGGAGG+AGG - tig0020882:97764-97783 None:intergenic 55.0%
TGGTGAAGGGAATGGAGAGG+AGG - tig0020882:97767-97786 None:intergenic 55.0%
TTCAGACGGTGAGAGTCCAG+TGG + tig0020882:98201-98220 Msa1387200:intron 55.0%
GGTGAGAGTCCAGTGGAGAA+GGG + tig0020882:98208-98227 Msa1387200:intron 55.0%
GAGTCCAGTGGAGAAGGGAA+AGG + tig0020882:98213-98232 Msa1387200:intron 55.0%
TGCTTGTACAGAGACGAGGC+AGG + tig0020882:98267-98286 Msa1387200:intron 55.0%
GCTTGTACAGAGACGAGGCA+GGG + tig0020882:98268-98287 Msa1387200:intron 55.0%
CAGCACGGAGGGATGATTGA+GGG + tig0020882:98291-98310 Msa1387200:intron 55.0%
AGCACGGAGGGATGATTGAG+GGG + tig0020882:98292-98311 Msa1387200:intron 55.0%
GAGGGATGATTGAGGGGAGA+TGG + tig0020882:98298-98317 Msa1387200:intron 55.0%
AGGGGAGATGGAGTTGTACG+AGG + tig0020882:98310-98329 Msa1387200:intron 55.0%
GAGATGGAGTTGTACGAGGC+AGG + tig0020882:98314-98333 Msa1387200:intron 55.0%
CAGCACGGAGGGATGATTGA+AGG + tig0020882:98291-98310 Msa1387200:intron 55.0%
GTAGATGCTGTTCGTCGTGC+AGG + tig0020882:98959-98978 Msa1387200:CDS 55.0%
AGATGCTGTTCGTCGTGCAG+GGG + tig0020882:98961-98980 Msa1387200:CDS 55.0%
TGCAGGAGACCGCATTTAGC+AGG + tig0020882:99234-99253 Msa1387200:intron 55.0%
GACTGATGGTATGCGGTGGA+AGG - tig0020882:100410-100429 None:intergenic 55.0%
!! ATTCGGGGTGCTGACTGCTG+AGG + tig0020882:92336-92355 Msa1387200:intron 60.0%
ATTGCTGCAGAGACCGGCAG+TGG + tig0020882:92458-92477 Msa1387200:CDS 60.0%
AGCAGAACTTTCCTGGCCGG+CGG - tig0020882:92575-92594 None:intergenic 60.0%
GGACCAGGGATGGCCAATTC+GGG + tig0020882:92866-92885 Msa1387200:intron 60.0%
GTTCCCGAATTGGCCATCCC+TGG - tig0020882:92872-92891 None:intergenic 60.0%
GCTCATCTCGCTCGCTGCTT+TGG + tig0020882:94564-94583 Msa1387200:intron 60.0%
TACCCACCTTCCATTGCCCC+TGG + tig0020882:95904-95923 Msa1387200:intron 60.0%
GAACCAGGGGCAATGGAAGG+TGG - tig0020882:95910-95929 None:intergenic 60.0%
! GTTTTCCAGTAGGGCCGGGA+TGG - tig0020882:96861-96880 None:intergenic 60.0%
TGGGGAAGGAGTTAGCGGAG+AGG - tig0020882:97736-97755 None:intergenic 60.0%
TGGAGAGGAGGAGGAGAGCT+GGG - tig0020882:97755-97774 None:intergenic 60.0%
ATGGAGAGGAGGAGGAGAGC+TGG - tig0020882:97756-97775 None:intergenic 60.0%
GGGTGGTGAAGGGAATGGAG+AGG - tig0020882:97770-97789 None:intergenic 60.0%
GAGCCGTGAGCGAAAGAAGC+AGG + tig0020882:97919-97938 Msa1387200:intron 60.0%
CGGTGAGAGTCCAGTGGAGA+AGG + tig0020882:98207-98226 Msa1387200:intron 60.0%
GCAGCACGGAGGGATGATTG+AGG + tig0020882:98290-98309 Msa1387200:intron 60.0%
TTGTACGAGGCAGGGCAGCA+CGG + tig0020882:98323-98342 Msa1387200:intron 60.0%
GTTCGTCGTGCAGGGGAACT+CGG + tig0020882:98968-98987 Msa1387200:CDS 60.0%
AGGGGAACTCGGTCTACCTG+TGG + tig0020882:98979-98998 Msa1387200:CDS 60.0%
AAGAAGTCTCTCCGCCGGCC+AGG + tig0020882:92561-92580 Msa1387200:CDS 65.0%
TGATGCAGCTGCTCGTGGCG+TGG + tig0020882:97215-97234 Msa1387200:CDS 65.0%
AGGAGGAGGAGAGCTGGGGA+AGG - tig0020882:97750-97769 None:intergenic 65.0%
GGAGAGGAGGAGGAGAGCTG+GGG - tig0020882:97754-97773 None:intergenic 65.0%
AGAGACGAGGCAGGGCAGCA+CGG + tig0020882:98276-98295 Msa1387200:intron 65.0%
CCAGTAGGGCCGGGATGGGT+TGG - tig0020882:96856-96875 None:intergenic 70.0%
CCAACCCATCCCGGCCCTAC+TGG + tig0020882:96853-96872 Msa1387200:intron 70.0%
ACGAGGCAGGGCAGCACGGA+GGG + tig0020882:98280-98299 Msa1387200:intron 70.0%
TACGAGGCAGGGCAGCACGG+AGG + tig0020882:98326-98345 Msa1387200:intron 70.0%
ACGAGGCAGGGCAGCACGGA+GGG + tig0020882:98280-98299 Msa1387200:intron 70.0%
GACGAGGCAGGGCAGCACGG+AGG + tig0020882:98279-98298 Msa1387200:intron 75.0%
Chromosome Type Strat End Strand Name
tig0020882 gene 91461 100842 91461 ID=Msa1387200;Name=Msa1387200
tig0020882 mRNA 91461 100842 91461 ID=Msa1387200-mRNA-1;Parent=Msa1387200;Name=Msa1387200-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.57|0.33|1|0.42|0.26|15|782|529
tig0020882 exon 91461 91619 91461 ID=Msa1387200-mRNA-1:exon:10460;Parent=Msa1387200-mRNA-1
tig0020882 exon 91647 91805 91647 ID=Msa1387200-mRNA-1:exon:10461;Parent=Msa1387200-mRNA-1
tig0020882 exon 92416 92610 92416 ID=Msa1387200-mRNA-1:exon:10462;Parent=Msa1387200-mRNA-1
tig0020882 exon 92629 92706 92629 ID=Msa1387200-mRNA-1:exon:10463;Parent=Msa1387200-mRNA-1
tig0020882 exon 92873 92986 92873 ID=Msa1387200-mRNA-1:exon:10464;Parent=Msa1387200-mRNA-1
tig0020882 exon 93099 93146 93099 ID=Msa1387200-mRNA-1:exon:10465;Parent=Msa1387200-mRNA-1
tig0020882 exon 93211 93217 93211 ID=Msa1387200-mRNA-1:exon:10466;Parent=Msa1387200-mRNA-1
tig0020882 exon 93268 93408 93268 ID=Msa1387200-mRNA-1:exon:10467;Parent=Msa1387200-mRNA-1
tig0020882 exon 93433 93538 93433 ID=Msa1387200-mRNA-1:exon:10468;Parent=Msa1387200-mRNA-1
tig0020882 exon 96939 97095 96939 ID=Msa1387200-mRNA-1:exon:10469;Parent=Msa1387200-mRNA-1
tig0020882 exon 97102 97266 97102 ID=Msa1387200-mRNA-1:exon:10470;Parent=Msa1387200-mRNA-1
tig0020882 exon 98848 99000 98848 ID=Msa1387200-mRNA-1:exon:10471;Parent=Msa1387200-mRNA-1
tig0020882 exon 99239 99290 99239 ID=Msa1387200-mRNA-1:exon:10472;Parent=Msa1387200-mRNA-1
tig0020882 exon 99752 100526 99752 ID=Msa1387200-mRNA-1:exon:10473;Parent=Msa1387200-mRNA-1
tig0020882 exon 100780 100842 100780 ID=Msa1387200-mRNA-1:exon:10474;Parent=Msa1387200-mRNA-1
tig0020882 CDS 91461 91619 91461 ID=Msa1387200-mRNA-1:cds;Parent=Msa1387200-mRNA-1
tig0020882 CDS 91647 91805 91647 ID=Msa1387200-mRNA-1:cds;Parent=Msa1387200-mRNA-1
tig0020882 CDS 92416 92610 92416 ID=Msa1387200-mRNA-1:cds;Parent=Msa1387200-mRNA-1
tig0020882 CDS 92629 92706 92629 ID=Msa1387200-mRNA-1:cds;Parent=Msa1387200-mRNA-1
tig0020882 CDS 92873 92986 92873 ID=Msa1387200-mRNA-1:cds;Parent=Msa1387200-mRNA-1
tig0020882 CDS 93099 93146 93099 ID=Msa1387200-mRNA-1:cds;Parent=Msa1387200-mRNA-1
tig0020882 CDS 93211 93217 93211 ID=Msa1387200-mRNA-1:cds;Parent=Msa1387200-mRNA-1
tig0020882 CDS 93268 93408 93268 ID=Msa1387200-mRNA-1:cds;Parent=Msa1387200-mRNA-1
tig0020882 CDS 93433 93538 93433 ID=Msa1387200-mRNA-1:cds;Parent=Msa1387200-mRNA-1
tig0020882 CDS 96939 97095 96939 ID=Msa1387200-mRNA-1:cds;Parent=Msa1387200-mRNA-1
tig0020882 CDS 97102 97266 97102 ID=Msa1387200-mRNA-1:cds;Parent=Msa1387200-mRNA-1
tig0020882 CDS 98848 99000 98848 ID=Msa1387200-mRNA-1:cds;Parent=Msa1387200-mRNA-1
tig0020882 CDS 99239 99290 99239 ID=Msa1387200-mRNA-1:cds;Parent=Msa1387200-mRNA-1
tig0020882 CDS 99752 99807 99752 ID=Msa1387200-mRNA-1:cds;Parent=Msa1387200-mRNA-1
tig0020882 three_prime_UTR 99808 100526 99808 ID=Msa1387200-mRNA-1:three_prime_utr;Parent=Msa1387200-mRNA-1
tig0020882 three_prime_UTR 100780 100842 100780 ID=Msa1387200-mRNA-1:three_prime_utr;Parent=Msa1387200-mRNA-1
Gene Sequence

>Msa1387200

ATGAACGTTACTCGTTCTGCTCTGAAGCTCCATCTTCAAAATTCACCTATTTGCTACCATCAATTCTTCTTCTTCTCTCGATTCAACAATGCTCTTATTCACAATCTCCCTTTGTCTTCTTCTTCTCTCTTCAATTTCAATGCAACGCGATTCTTTTCTACACAACCCTTTGTTGGAAGCGCCGTTTCATCAGAAGATTTCAATGGAAAAGACACTTTCTTTGCCGAGGATAACGTTTCGTGGAGTTCACTTGGTCTTTCTCATACCCTTTCTCGAGCTCTCTCTAATATTGCTCTCAATACACCCTCTCTCGTTCAGGCTTCTTCTATACCATCTGTGTTGTCAGGAAAGGATGTAGTTATTGCTGCAGAGACCGGCAGTGGTAAGACATACAGTTATCTGCTTCCTCTCATTGATAAGCTGAGGGGTACAGAGGAATATTCTCTGGATGTTGTATCTGATAAAGAAGTCTCTCCGCCGGCCAGGAAAGTTCTGCTCGTGCTTTGTCCGAATGTAGTTAGGATGGCTAATAGTCTTCGTGGAGACAATGATGAAACCATTGTTAGTGCTGCAGCCATTTGTGGGAAACAGGGATGGCCAATTCGGGAACCTGATATCATTGTGACAACACCTGCTGCTCTTCTCAATCATGTTGACGTTGATAGAAGACGCCGCATGGAATTTATGCATGGTGTTAAATATGTGGTGTTTGATGAAGCTGATATGCTCCTCTGTGGGAGCTTCCAGAATAAATATCAGAGTGAAGAGGAATTTCCAATTGAAGCCATGTCAGACGAGGAGGATGATGGTAACGAGGATATTGCCAATATTAATAACGAAGCTGAATCTGTCAAGAAAACAAGAAGAGACTGGAGAAGAGTGAGGAAATATTTTGAGCGTACTACACTTCCGGTGAATGGAAAGAAAACAGCGGGAGCATTATTGAAACACATGTTTCCTGATGCTGAGTGGGTTAGTGGAAACTATCTTCATTGTCACAATCCAAGATTGAAGCAAAGATGGATAGAAGTGACTGTTGATACACAAGTGAAAGAGCTCATAAGGGCTGTGAATCACAGTTTAAAATCGGAAGATTTGGATAATGGTGGTGGCATTCATAGAACAATGGTGTTTGCCAACACAGTTGAGGCTGTTGAAGCTGTGATATTGGGCTATGCTGGGCTTGAATGTTTACGTTATCATAAGAATTGCACGTTGGATGAGCGGGCACAAACTTTAGTTGATTTCTACGACAAAGGTGGTGTTCTTGTATGTACTGATGCAGCTGCTCGTGGCGTGGATATTCCAAATGTCTCTCATGTTATTCAGGCAGATTTTGCTACTTCTGCTGTAGACTTTTTGCATAGGATTGGTCGTACAGCTAGAGCTGGCCAAATCGGACTAGTTACCAGCATGTATACCGAATCCAACAGAGAGCTTGTAGATGCTGTTCGTCGTGCAGGGGAACTCGGTCTACCTGTGGAGACCGCATTTAGCAGGAAAAGAAGCTTCCGTAACAAGATAAAAAAGAAAGCAAGTGCTAACAAAGTCAGAGATTCAGCAACCATTGAAGAGAGTCTTACAGCGTGA
Protein sequence

>Msa1387200

MNVTRSALKLHLQNSPICYHQFFFFSRFNNALIHNLPLSSSSLFNFNATRFFSTQPFVGSAVSSEDFNGKDTFFAEDNVSWSSLGLSHTLSRALSNIALNTPSLVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLIDKLRGTEEYSLDVVSDKEVSPPARKVLLVLCPNVVRMANSLRGDNDETIVSAAAICGKQGWPIREPDIIVTTPAALLNHVDVDRRRRMEFMHGVKYVVFDEADMLLCGSFQNKYQSEEEFPIEAMSDEEDDGNEDIANINNEAESVKKTRRDWRRVRKYFERTTLPVNGKKTAGALLKHMFPDAEWVSGNYLHCHNPRLKQRWIEVTVDTQVKELIRAVNHSLKSEDLDNGGGIHRTMVFANTVEAVEAVILGYAGLECLRYHKNCTLDERAQTLVDFYDKGGVLVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTARAGQIGLVTSMYTESNRELVDAVRRAGELGLPVETAFSRKRSFRNKIKKKASANKVRDSATIEESLTA*