AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0313410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0313410 MtrunA17_Chr2g0282961 84.897 682 32 6 1 680 1 613 0.0 1086
Msa0313410 MtrunA17_Chr4g0046371 66.667 696 168 18 1 678 2 651 0.0 848
Msa0313410 MtrunA17_Chr4g0029671 51.464 478 212 9 52 512 53 527 4.19e-149 452
Msa0313410 MtrunA17_Chr2g0326281 40.701 656 323 16 52 672 55 679 2.94e-142 435
Msa0313410 MtrunA17_Chr8g0385791 48.157 407 191 3 47 442 53 450 2.15e-121 381
Msa0313410 MtrunA17_Chr2g0276781 49.448 362 166 3 53 407 23 374 6.14e-113 354
Msa0313410 MtrunA17_Chr4g0009751 45.432 405 196 7 53 448 19 407 2.90e-110 346
Msa0313410 MtrunA17_Chr5g0433301 48.837 387 158 7 51 416 20 387 3.73e-108 347
Msa0313410 MtrunA17_Chr4g0070181 50.862 348 153 3 49 388 19 356 2.36e-107 350
Msa0313410 MtrunA17_Chr2g0285461 50.000 370 154 9 35 388 4 358 3.38e-107 346
Msa0313410 MtrunA17_Chr2g0301251 51.020 343 152 2 53 388 23 356 9.97e-107 349
Msa0313410 MtrunA17_Chr8g0376771 49.041 365 164 7 35 388 4 357 1.55e-106 344
Msa0313410 MtrunA17_Chr3g0109391 48.187 386 162 7 51 416 22 389 3.75e-106 342
Msa0313410 MtrunA17_Chr1g0156321 50.000 364 158 7 53 405 43 393 2.17e-105 340
Msa0313410 MtrunA17_Chr8g0346711 47.107 363 170 7 53 407 29 377 1.35e-101 325
Msa0313410 MtrunA17_Chr8g0389081 49.858 351 156 5 48 388 27 367 8.14e-101 332
Msa0313410 MtrunA17_Chr7g0239061 42.963 405 200 9 53 447 14 397 2.28e-95 308
Msa0313410 MtrunA17_Chr2g0326761 39.706 408 184 11 53 418 11 398 6.02e-84 279
Msa0313410 MtrunA17_Chr4g0028971 36.285 463 230 7 47 465 6 447 1.02e-82 275
Msa0313410 MtrunA17_Chr1g0199681 39.604 404 190 11 27 387 65 457 4.30e-82 274
Msa0313410 MtrunA17_Chr1g0181211 37.413 433 207 10 51 432 23 442 4.67e-80 268
Msa0313410 MtrunA17_Chr7g0264171 37.018 389 186 9 49 387 27 406 4.64e-71 242
Msa0313410 MtrunA17_Chr3g0115271 36.207 406 211 7 39 407 5 399 5.81e-68 233
Msa0313410 MtrunA17_Chr7g0264161 39.677 310 174 5 62 367 1 301 6.28e-65 216
Msa0313410 MtrunA17_Chr5g0424931 34.015 391 198 11 32 387 2 367 1.47e-64 223
Msa0313410 MtrunA17_Chr5g0417281 35.674 356 185 11 47 387 5 331 3.46e-61 213
Msa0313410 MtrunA17_Chr8g0356211 41.353 266 142 5 166 429 2 255 2.17e-60 205
Msa0313410 MtrunA17_Chr5g0436761 34.943 352 185 12 53 387 12 336 1.19e-51 186
Msa0313410 MtrunA17_Chr1g0178011 30.595 353 218 9 45 387 3 338 3.88e-51 184
Msa0313410 MtrunA17_Chr2g0289221 35.821 335 179 11 45 367 11 321 4.15e-51 181
Msa0313410 MtrunA17_Chr2g0277461 31.014 345 207 9 53 387 13 336 2.83e-47 173
Msa0313410 MtrunA17_Chr5g0417211 32.229 332 181 10 53 368 12 315 6.68e-46 168
Msa0313410 MtrunA17_Chr5g0424801 30.214 374 216 13 43 397 4 351 7.25e-42 156
Msa0313410 MtrunA17_Chr5g0424741 30.208 384 228 11 44 393 3 380 8.05e-42 159
Msa0313410 MtrunA17_Chr5g0425261 29.947 374 217 13 43 397 4 351 6.22e-40 150
Msa0313410 MtrunA17_Chr2g0277531 28.896 308 189 11 53 350 20 307 5.44e-34 132
Msa0313410 MtrunA17_Chr5g0425661 34.783 207 122 4 53 255 37 234 4.12e-33 127
Msa0313410 MtrunA17_Chr8g0345771 36.752 117 72 2 136 252 150 264 9.83e-13 71.2
Msa0313410 MtrunA17_Chr7g0276471 41.304 92 53 1 156 247 116 206 1.24e-12 70.5
Msa0313410 MtrunA17_Chr5g0424791 28.571 154 92 5 99 252 14 149 8.43e-12 63.5
Msa0313410 MtrunA17_Chr1g0178071 30.457 197 125 7 125 310 39 234 3.00e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0313410 AT2G33860.1 58.801 517 178 4 2 515 3 487 0.0 601
Msa0313410 AT2G33860.2 59.945 362 110 4 157 515 1 330 1.83e-145 431
Msa0313410 AT5G60450.2 48.861 483 217 9 49 512 37 508 1.12e-140 430
Msa0313410 AT5G60450.1 49.061 479 214 9 53 512 65 532 6.82e-140 428
Msa0313410 AT5G62000.2 45.433 427 212 4 44 458 52 469 6.93e-119 376
Msa0313410 AT5G62000.5 45.433 427 212 4 44 458 52 469 6.93e-119 376
Msa0313410 AT5G62000.3 45.433 427 212 4 44 458 52 469 6.93e-119 376
Msa0313410 AT5G62000.1 45.433 427 212 4 44 458 52 469 6.93e-119 376
Msa0313410 AT5G62000.4 45.433 427 212 4 44 458 52 469 1.03e-118 375
Msa0313410 AT1G59750.4 49.568 347 158 3 49 388 18 354 4.48e-111 350
Msa0313410 AT1G59750.2 49.568 347 158 3 49 388 18 354 4.72e-111 350
Msa0313410 AT1G59750.1 49.568 347 158 3 49 388 18 354 5.69e-111 350
Msa0313410 AT1G59750.3 49.568 347 158 3 49 388 18 354 5.69e-111 350
Msa0313410 AT1G19220.1 51.603 343 150 2 53 388 23 356 8.46e-108 352
Msa0313410 AT2G46530.1 49.133 346 151 6 53 388 21 351 2.37e-106 335
Msa0313410 AT5G37020.2 46.078 408 179 10 47 436 14 398 4.14e-106 340
Msa0313410 AT2G46530.3 49.133 346 151 6 53 388 42 372 5.88e-106 335
Msa0313410 AT5G37020.1 45.813 406 183 8 47 436 14 398 1.13e-105 340
Msa0313410 AT3G61830.1 47.159 352 161 5 47 388 19 355 6.68e-105 332
Msa0313410 AT4G23980.1 44.330 388 192 6 53 432 12 383 4.75e-104 330
Msa0313410 AT4G23980.2 44.709 378 182 6 53 415 12 377 6.81e-104 330
Msa0313410 AT1G30330.3 51.724 348 144 8 53 388 25 360 7.90e-104 338
Msa0313410 AT1G30330.2 51.724 348 144 8 53 388 25 360 7.90e-104 338
Msa0313410 AT1G30330.1 51.724 348 144 8 53 388 23 358 8.53e-104 338
Msa0313410 AT5G20730.2 50.291 344 153 3 53 388 24 357 3.07e-102 338
Msa0313410 AT1G19850.2 49.570 349 148 6 53 387 43 377 1.01e-101 331
Msa0313410 AT1G19850.1 49.570 349 148 6 53 387 54 388 1.33e-101 331
Msa0313410 AT5G20730.3 50.145 345 153 4 53 388 24 358 9.82e-101 333
Msa0313410 AT5G20730.1 50.145 345 153 4 53 388 24 358 1.65e-100 333
Msa0313410 AT3G61830.2 48.505 301 142 3 88 388 17 304 1.78e-92 298
Msa0313410 AT1G35540.1 41.481 405 203 8 53 439 27 415 1.80e-90 294
Msa0313410 AT1G35240.1 42.092 392 197 8 53 435 27 397 4.25e-89 290
Msa0313410 AT1G34410.1 41.646 401 200 10 53 435 27 411 8.91e-89 290
Msa0313410 AT1G34390.1 42.063 378 190 7 53 419 27 386 1.41e-88 289
Msa0313410 AT1G34310.1 41.799 378 193 6 53 419 27 388 9.61e-87 284
Msa0313410 AT1G35520.1 41.270 378 195 7 53 419 27 388 5.25e-86 282
Msa0313410 AT1G34170.1 37.188 441 220 11 53 459 25 442 6.48e-85 276
Msa0313410 AT4G30080.1 41.398 372 174 9 53 387 19 383 2.09e-82 274
Msa0313410 AT5G37020.3 51.064 282 126 5 158 436 31 303 4.70e-82 275
Msa0313410 AT2G28350.2 39.410 373 187 5 53 387 10 381 1.42e-81 272
Msa0313410 AT2G28350.1 39.410 373 187 5 53 387 10 381 1.87e-81 272
Msa0313410 AT2G46530.2 54.506 233 99 4 158 388 37 264 3.76e-80 264
Msa0313410 AT1G34170.2 34.694 441 205 11 53 459 25 416 3.09e-72 242
Msa0313410 AT1G34170.3 34.624 439 208 10 53 459 25 416 1.75e-71 242
Msa0313410 AT1G77850.1 34.129 419 211 13 54 432 20 413 3.63e-63 220
Msa0313410 AT1G77850.2 34.129 419 211 13 54 432 20 413 4.43e-63 220
Msa0313410 AT1G43950.1 47.170 212 89 6 53 257 27 222 2.86e-52 180
Msa0313410 AT2G46870.1 38.211 123 68 3 141 258 20 139 6.25e-14 73.6
Msa0313410 AT1G01030.2 41.304 92 53 1 156 247 54 144 1.94e-13 72.4
Msa0313410 AT1G01030.1 41.304 92 53 1 156 247 54 144 2.60e-13 72.4
Msa0313410 AT4G01500.1 40.217 92 52 1 156 247 34 122 2.87e-13 72.0
Msa0313410 AT1G13260.1 31.410 156 91 3 157 308 187 330 1.51e-12 70.1
Msa0313410 AT3G25730.1 31.818 132 78 3 153 282 178 299 5.63e-12 68.2
Msa0313410 AT3G61970.1 36.667 120 72 2 140 256 5 123 6.70e-12 67.4

Find 199 sgRNAs with CRISPR-Local

Find 644 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTGCAGGCCATCCATTTC+TGG 0.192673 2_4:+8767060 None:intergenic
GTGATGCTGTGTTGTTTCTT+AGG 0.208732 2_4:-8768815 Msa0313410:intron
CTTGACCTTGCAAGACCTTT+TGG 0.224240 2_4:+8767179 None:intergenic
TCCTCAAGGTTCTGTTTGTT+TGG 0.242457 2_4:-8770378 Msa0313410:CDS
CTGGAAGGCACAACTTCTTT+TGG 0.244577 2_4:-8766827 Msa0313410:CDS
AGGCATCAAGGCATAATAAT+AGG 0.252606 2_4:-8767664 Msa0313410:CDS
CTTGCAAGGTCAAGAAATTA+TGG 0.253844 2_4:-8767377 Msa0313410:CDS
ACAACAATGCTTCCTTTCTT+TGG 0.260385 2_4:+8770317 None:intergenic
GTTCTGTTTGTTTGGAGCTT+TGG 0.278338 2_4:-8770370 Msa0313410:CDS
GGATTGGAGCGTCAGACTTT+GGG 0.304165 2_4:-8767423 Msa0313410:CDS
ACTAGCTGCCATCAGGTTAC+TGG 0.311822 2_4:+8767598 None:intergenic
CCCTGTAACGGCATAGGCTT+TGG 0.312124 2_4:-8767217 Msa0313410:CDS
ACCAAAGCCTATGCCGTTAC+AGG 0.314128 2_4:+8767216 None:intergenic
GCTAGTCCACTAGATAAAAT+AGG 0.316462 2_4:+8766851 None:intergenic
GATATGGTTTCTTGTAAAAC+TGG 0.319862 2_4:-8766722 Msa0313410:CDS
CTTGACCTTGCAAGACCTTT+CGG 0.326370 2_4:+8767386 None:intergenic
TTGAGCATTAATACTGTCAT+AGG 0.327410 2_4:+8767342 None:intergenic
TGCCATCAGGTTACTGGAAT+TGG 0.331969 2_4:+8767604 None:intergenic
TTTGATCCTGGCCATCTAAC+AGG 0.335220 2_4:+8768207 None:intergenic
AGGAGGCATTTGCTCACAAC+TGG 0.344623 2_4:-8768876 Msa0313410:CDS
TTGAAAAGTTCTGGTTCCTT+TGG 0.345700 2_4:-8768668 Msa0313410:CDS
CTTGTTGGTTCCTGAAAATC+AGG 0.346782 2_4:-8769860 Msa0313410:intron
GAAGAAGAAATAGCTGAATA+TGG 0.353827 2_4:+8770470 None:intergenic
ATTCTGCTGGAATGAGGTTC+AGG 0.356740 2_4:-8768383 Msa0313410:CDS
CTTAGAAAATTACTTGGAAC+TGG 0.358853 2_4:+8767530 None:intergenic
ATCCCGGTTCAAACTGTTCC+GGG 0.364323 2_4:-8767288 Msa0313410:CDS
TCATACCGAGAGTTTGAAAC+TGG 0.364947 2_4:+8766944 None:intergenic
ACCTCCCTAGCTCATATAAC+CGG 0.366764 2_4:+8767314 None:intergenic
GGTTCCTTTGGAGGGTCCTC+TGG 0.378058 2_4:-8768656 Msa0313410:CDS
GCGGTGCAGTTGAAAAGTTC+TGG 0.379713 2_4:-8768677 Msa0313410:CDS
ATCAAAATGGAAATGCCTAT+TGG 0.380196 2_4:-8768190 Msa0313410:intron
GGGATTGGAGCGTCAGACTT+TGG 0.382193 2_4:-8767424 Msa0313410:CDS
AAAACTGGCTGCAGACTCTT+CGG 0.383825 2_4:-8766707 Msa0313410:CDS
CTTGATTGTTCTTATTCTGC+TGG 0.385178 2_4:-8768396 Msa0313410:CDS
TCATAATAATAATAATTTGT+TGG 0.385376 2_4:-8766792 Msa0313410:CDS
TGAGAGTCTTGCAGAACATA+TGG 0.388643 2_4:+8769410 None:intergenic
TGATAATATTAATCTCAATC+AGG 0.389378 2_4:-8766924 Msa0313410:CDS
TATCCCGGTTCAAACTGTTC+CGG 0.398623 2_4:-8767289 Msa0313410:CDS
GCAAGTGGAGCAAAATGTTC+GGG 0.402501 2_4:-8769497 Msa0313410:CDS
AAAAGTTCTGGTTCCTTTGG+AGG 0.403391 2_4:-8768665 Msa0313410:CDS
AGGGTCCTCTGGTATGCAAT+TGG 0.407086 2_4:-8768645 Msa0313410:CDS
GAGCTTTGGCATGCTTGTGC+TGG 0.408044 2_4:-8770356 Msa0313410:CDS
AAACTGGCTGCAGACTCTTC+GGG 0.411738 2_4:-8766706 Msa0313410:CDS
CCAATGCTCGGGTCCAGAAA+TGG 0.411902 2_4:-8767073 Msa0313410:CDS
TTGATCTCTTTACCAAAGAA+AGG 0.420423 2_4:-8770329 Msa0313410:CDS
GGAGGTTCCGGCATATATAC+AGG 0.422819 2_4:-8768999 Msa0313410:CDS
TCTGGTATGCAATTGGATCC+TGG 0.423772 2_4:-8768638 Msa0313410:CDS
TTAGATGGCCAGGATCAAAA+TGG 0.424313 2_4:-8768203 Msa0313410:CDS
TTCTAATGAGGCAGGTTCAC+TGG 0.424709 2_4:-8768258 Msa0313410:intron
AATAATAATAATTTGTTGGA+TGG 0.424748 2_4:-8766788 Msa0313410:CDS
AGCAAGTGGAGCAAAATGTT+CGG 0.428665 2_4:-8769498 Msa0313410:CDS
TTGCATGCATCTGTTACATC+TGG 0.432429 2_4:-8767016 Msa0313410:CDS
TTTATCTAGTGGACTAGCTC+TGG 0.432678 2_4:-8766846 Msa0313410:CDS
GGAATATTACAAGCAGAAAC+AGG 0.435107 2_4:+8770254 None:intergenic
ATAATTTGTTGGATGGTTCA+AGG 0.435195 2_4:-8766781 Msa0313410:CDS
CACTTCTACTTCAGCAGCTA+TGG 0.439288 2_4:-8770420 Msa0313410:CDS
TTTGACGAGGCCCGTGGAAG+TGG 0.439439 2_4:-8767121 Msa0313410:CDS
GGCATCAAGGCATAATAATA+GGG 0.442600 2_4:-8767663 Msa0313410:CDS
TGAAGACTGCTTTCCTCCCC+TGG 0.447036 2_4:-8769335 Msa0313410:intron
ATTGGATCCTGGCTCTCTCA+TGG 0.448332 2_4:-8768627 Msa0313410:CDS
AGGTTCACTGGATTAATTGC+TGG 0.450146 2_4:-8768246 Msa0313410:CDS
GCTCTTGTGAAGGCCTCTGC+TGG 0.456741 2_4:+8769052 None:intergenic
AGGATGGAGAACTGAGACTA+GGG 0.457399 2_4:-8768709 Msa0313410:CDS
CCTCCACCTCTTCCTCCTCA+AGG 0.458803 2_4:-8770392 Msa0313410:CDS
TCATCTTCTTCTTCTCACTC+TGG 0.460997 2_4:-8770449 Msa0313410:CDS
TGTTCCGGGATTGCTGCAAC+AGG 0.462435 2_4:-8767274 Msa0313410:CDS
AATCCCGGAACAGTTTGAAC+CGG 0.468798 2_4:+8767285 None:intergenic
GTTGTGAGCAAATGCCTCCT+TGG 0.470083 2_4:+8768879 None:intergenic
ACTAGATAAAATAGGCTTGT+GGG 0.474427 2_4:+8766859 None:intergenic
GCAGCGTCATGCATCTGTGC+AGG 0.474941 2_4:+8767046 None:intergenic
CTCTTCAAGAACTTGTTGAC+AGG 0.477751 2_4:+8768420 None:intergenic
TGATATATTAGGGGTGAGGA+TGG 0.479470 2_4:-8768725 Msa0313410:intron
CCATTTCTGGACCCGAGCAT+TGG 0.481294 2_4:+8767073 None:intergenic
TACATATCTGAAGCTAAAAG+TGG 0.482634 2_4:-8766896 Msa0313410:CDS
ATGGCTCGGAGTGGAGGTTC+CGG 0.487428 2_4:-8769011 Msa0313410:CDS
GATGAGAGACAATCAAGATA+TGG 0.488060 2_4:-8766738 Msa0313410:CDS
TGAATCTTTCAGATTCCAAA+AGG 0.488445 2_4:-8767194 Msa0313410:CDS
ATTTCCTGTTGCAGCAATCC+CGG 0.489961 2_4:+8767270 None:intergenic
GTGGATCCTGTTAGATGGCC+AGG 0.491480 2_4:-8768213 Msa0313410:CDS
TCTTCAAACTAGCTGCCATC+AGG 0.491550 2_4:+8767591 None:intergenic
CCATGGGAAATCGAGCCATC+TGG 0.493386 2_4:-8767635 Msa0313410:CDS
GTTCTTATTCTGCTGGAATG+AGG 0.495749 2_4:-8768389 Msa0313410:CDS
CAGCAGAATAAGAACAATCA+AGG 0.499150 2_4:+8768397 None:intergenic
CAGCTAGTTTGAAGAGGACC+AGG 0.503820 2_4:-8767583 Msa0313410:CDS
ATCTGTGTTAATGTTCCAGC+AGG 0.504305 2_4:-8766975 Msa0313410:CDS
GCTTCTGACACTAGCACTCA+TGG 0.504325 2_4:-8769385 Msa0313410:CDS
AACGAGGCTCGTCCGTAGGG+TGG 0.505344 2_4:+8767142 None:intergenic
GGTTGTGTTGGACGTTATGA+TGG 0.506134 2_4:-8767100 Msa0313410:CDS
GGTAAGGTGGGATGATATAG+AGG 0.506725 2_4:-8767684 Msa0313410:CDS
ACAACATCCATGAGAGAGCC+AGG 0.507240 2_4:+8768620 None:intergenic
TTAATCCAGTTTCAAACTCT+CGG 0.507421 2_4:-8766949 Msa0313410:CDS
GTTTGTTTGACAGATGGGAT+TGG 0.508320 2_4:-8767439 Msa0313410:intron
AAAGTTCTGGTTCCTTTGGA+GGG 0.508492 2_4:-8768664 Msa0313410:CDS
TTGCAAGGTCAAGAAATTAT+GGG 0.510787 2_4:-8767376 Msa0313410:CDS
AGTGTATTGTCAAGTCTTGT+TGG 0.511473 2_4:-8769875 Msa0313410:CDS
AATTGATGCTGATGCGGAAG+AGG 0.519080 2_4:-8769467 Msa0313410:CDS
CCTTGAGGAGGAAGAGGTGG+AGG 0.520375 2_4:+8770392 None:intergenic
GCCGCCAATGTGTGTGTCAT+CGG 0.521158 2_4:+8766673 None:intergenic
ACCGATGACACACACATTGG+CGG 0.524428 2_4:-8766674 Msa0313410:CDS
AGTTTGAAGAGGACCAGGAT+TGG 0.525572 2_4:-8767578 Msa0313410:CDS
GTCCAACACAACCACTTCCA+CGG 0.527880 2_4:+8767110 None:intergenic
AATAAGAAGAAGCTTGTGTC+TGG 0.529144 2_4:-8768837 Msa0313410:CDS
AAACTGGATTAACAGCCTGC+TGG 0.529156 2_4:+8766960 None:intergenic
TTAGTGTTTGCTATAATCCA+AGG 0.530357 2_4:-8768571 Msa0313410:intron
TATGATGGTTATCCAATGCT+CGG 0.531088 2_4:-8767085 Msa0313410:CDS
GCCCGTGGAAGTGGTTGTGT+TGG 0.532318 2_4:-8767112 Msa0313410:CDS
GCTCGTCCGTAGGGTGGGCA+CGG 0.538067 2_4:+8767148 None:intergenic
AACTGAGACTAGGGATTCGT+AGG 0.539200 2_4:-8768700 Msa0313410:CDS
TCTCATCCTTACAGGTAAGG+TGG 0.540717 2_4:-8767697 Msa0313410:intron
TGATGAAGTAAATCCAATCC+TGG 0.540978 2_4:+8767565 None:intergenic
AGGAAATATCAGAATGCAGC+CGG 0.542520 2_4:-8767254 Msa0313410:CDS
TTATTGATATATTAGGGGTG+AGG 0.544361 2_4:-8768729 Msa0313410:intron
GTCAAACGAGGCTCGTCCGT+AGG 0.545617 2_4:+8767138 None:intergenic
GAGAGTCTTGCAGAACATAT+GGG 0.546093 2_4:+8769411 None:intergenic
TCCAACACAACCACTTCCAC+GGG 0.546409 2_4:+8767111 None:intergenic
CTCATCCTTACAGGTAAGGT+GGG 0.547514 2_4:-8767696 Msa0313410:intron
CACTAGATAAAATAGGCTTG+TGG 0.548010 2_4:+8766858 None:intergenic
ATCTGCATGGCTCGGAGTGG+AGG 0.549415 2_4:-8769017 Msa0313410:CDS
ACAGAACCTTGAGGAGGAAG+AGG 0.550075 2_4:+8770386 None:intergenic
TAATAATAGGGTTTCCCCAT+GGG 0.552921 2_4:-8767651 Msa0313410:CDS
AGATTCCAAAAGGTCTTGCA+AGG 0.554960 2_4:-8767184 Msa0313410:CDS
GTGATGTGGATCCTGTTAGA+TGG 0.555747 2_4:-8768218 Msa0313410:CDS
TCAAACGAGGCTCGTCCGTA+GGG 0.557969 2_4:+8767139 None:intergenic
GGAGCAAAATGTTCGGGAAG+GGG 0.558230 2_4:-8769491 Msa0313410:CDS
GAGCTAGGGAGGTGCTATCC+CGG 0.558273 2_4:-8767304 Msa0313410:CDS
CCAGATGGCTCGATTTCCCA+TGG 0.559343 2_4:+8767635 None:intergenic
TTCACAAGAGCTTGTAGCAA+AGG 0.561527 2_4:-8769040 Msa0313410:CDS
GATAATATTAATCTCAATCA+GGG 0.564287 2_4:-8766923 Msa0313410:CDS
TGGAACATTAACACAGATGA+TGG 0.566397 2_4:+8766980 None:intergenic
GAACCTTGAGGAGGAAGAGG+TGG 0.567888 2_4:+8770389 None:intergenic
AGCAAAGGATCTGCATGGCT+CGG 0.568425 2_4:-8769025 Msa0313410:CDS
TGAGCATTAATACTGTCATA+GGG 0.569740 2_4:+8767343 None:intergenic
ATGATGGTTATCCAATGCTC+GGG 0.570161 2_4:-8767084 Msa0313410:CDS
AGTCCCCGGTTATATGAGCT+AGG 0.571174 2_4:-8767319 Msa0313410:CDS
CTGAAGATGCTGCAGAGCGA+AGG 0.573424 2_4:-8768347 Msa0313410:intron
ACGAGGCTCGTCCGTAGGGT+GGG 0.574143 2_4:+8767143 None:intergenic
GAGGATGGAGAACTGAGACT+AGG 0.576907 2_4:-8768710 Msa0313410:CDS
CCAAAGCCTATGCCGTTACA+GGG 0.579594 2_4:+8767217 None:intergenic
CCTCCCTAGCTCATATAACC+GGG 0.579600 2_4:+8767315 None:intergenic
TTCTTTGGTAAAGAGATCAA+AGG 0.581371 2_4:+8770332 None:intergenic
TGATGCTGATGCGGAAGAGG+AGG 0.584498 2_4:-8769464 Msa0313410:CDS
ATTCTTCCGTGCCCACCCTA+CGG 0.589745 2_4:-8767154 Msa0313410:CDS
TGGAGCAAAATGTTCGGGAA+GGG 0.590933 2_4:-8769492 Msa0313410:CDS
AGATTCCGAAAGGTCTTGCA+AGG 0.591011 2_4:-8767391 Msa0313410:CDS
GCCTCGTTTGACGAGGCCCG+TGG 0.594609 2_4:-8767127 Msa0313410:CDS
GATTGGAGCGTCAGACTTTG+GGG 0.595092 2_4:-8767422 Msa0313410:CDS
GTATTAATGCTCAAAGTCCC+CGG 0.595936 2_4:-8767333 Msa0313410:CDS
ACATACCCCTGTATATATGC+CGG 0.602336 2_4:+8768992 None:intergenic
GTGGAGCAAAATGTTCGGGA+AGG 0.607985 2_4:-8769493 Msa0313410:CDS
ATCCCGGAACAGTTTGAACC+GGG 0.608108 2_4:+8767286 None:intergenic
GGGATGATATAGAGGCATCA+AGG 0.608470 2_4:-8767676 Msa0313410:CDS
TATGTGAAAATTACCAGGGG+AGG 0.608609 2_4:+8769322 None:intergenic
GAGGTTCCGGCATATATACA+GGG 0.610720 2_4:-8768998 Msa0313410:CDS
TTAACCGATGACACACACAT+TGG 0.611716 2_4:-8766677 Msa0313410:CDS
GGAATCATTAAGATTCCGAA+AGG 0.612567 2_4:-8767401 Msa0313410:CDS
TTCCAATTCCAGTAACCTGA+TGG 0.613226 2_4:-8767606 Msa0313410:CDS
ACTGAGACTAGGGATTCGTA+GGG 0.614609 2_4:-8768699 Msa0313410:CDS
CAGATGGCTCGATTTCCCAT+GGG 0.616656 2_4:+8767636 None:intergenic
CAGGGAAAATCAGAAGCCGC+CGG 0.618202 2_4:+8767235 None:intergenic
GTGGAAGAGAGAGAAAGTGA+AGG 0.618235 2_4:-8770723 Msa0313410:five_prime_UTR
GTCCCCGGTTATATGAGCTA+GGG 0.619100 2_4:-8767318 Msa0313410:CDS
TTTGCTACAAGCTCTTGTGA+AGG 0.621318 2_4:+8769042 None:intergenic
TTTAGGATTACAGCCAGCAG+AGG 0.626599 2_4:-8769065 Msa0313410:intron
ACACGACAGAAAACATGAGG+TGG 0.628496 2_4:+8770233 None:intergenic
ATAATAATAGGGTTTCCCCA+TGG 0.628746 2_4:-8767652 Msa0313410:CDS
TCCACGGGCCTCGTCAAACG+AGG 0.628825 2_4:+8767126 None:intergenic
GGAGGCATTTGCTCACAACT+GGG 0.631966 2_4:-8768875 Msa0313410:CDS
AGGGGTAATTGATGCTGATG+CGG 0.632870 2_4:-8769473 Msa0313410:CDS
CCCGGTTATATGAGCTAGGG+AGG 0.633034 2_4:-8767315 Msa0313410:CDS
TGCTCGGGTCCAGAAATGGA+TGG 0.638360 2_4:-8767069 Msa0313410:CDS
TGATGGCAGCTAGTTTGAAG+AGG 0.639010 2_4:-8767589 Msa0313410:CDS
GAGACTAGGGATTCGTAGGG+CGG 0.640641 2_4:-8768696 Msa0313410:CDS
GATAAAATAGGCTTGTGGGA+AGG 0.641991 2_4:+8766863 None:intergenic
CTTGTAGCAAAGGATCTGCA+TGG 0.646829 2_4:-8769030 Msa0313410:CDS
GATGACACACACATTGGCGG+CGG 0.651394 2_4:-8766671 Msa0313410:CDS
AGGATCTGCATGGCTCGGAG+TGG 0.652171 2_4:-8769020 Msa0313410:CDS
TCTAGTGGACTAGCTCTGGA+AGG 0.652449 2_4:-8766842 Msa0313410:CDS
AATTGCTGGAATAAGTGATG+TGG 0.654162 2_4:-8768232 Msa0313410:CDS
GGCATTTGCTCACAACTGGG+TGG 0.657268 2_4:-8768872 Msa0313410:CDS
CGGACGAGCCTCGTTTGACG+AGG 0.658321 2_4:-8767134 Msa0313410:CDS
CATACCAGAGGACCCTCCAA+AGG 0.666097 2_4:+8768652 None:intergenic
TCGTTGGAGCAGGACAGCCA+AGG 0.673661 2_4:-8768896 Msa0313410:intron
CTGAGAGAGTGATAGCTCAG+TGG 0.673809 2_4:-8770742 None:intergenic
ATTGTTGTTTATGTTCCACA+AGG 0.675688 2_4:-8770302 Msa0313410:CDS
AGGATCCAATTGCATACCAG+AGG 0.675738 2_4:+8768640 None:intergenic
CAGTCTTCAGCAGCTCGACG+AGG 0.676991 2_4:+8769349 None:intergenic
AAATATCAGAATGCAGCCGG+CGG 0.679146 2_4:-8767251 Msa0313410:CDS
AGATGGCTCGATTTCCCATG+GGG 0.681877 2_4:+8767637 None:intergenic
AGAACACGACAGAAAACATG+AGG 0.684027 2_4:+8770230 None:intergenic
TTGGAGCAGGACAGCCAAGG+AGG 0.696098 2_4:-8768893 Msa0313410:intron
GCTTGTTCAAAGTGTCCTTG+TGG 0.696713 2_4:+8770287 None:intergenic
AAACAAACAGAACCTTGAGG+AGG 0.697531 2_4:+8770380 None:intergenic
AGAGTCTTGCAGAACATATG+GGG 0.705605 2_4:+8769412 None:intergenic
GAATTGGAAGCAGAACCAGA+TGG 0.706161 2_4:+8767620 None:intergenic
AATCGATCTCAACACTACAG+AGG 0.712921 2_4:-8770504 Msa0313410:CDS
CTCCCTAGCTCATATAACCG+GGG 0.726668 2_4:+8767316 None:intergenic
TCCAAACAAACAGAACCTTG+AGG 0.748059 2_4:+8770377 None:intergenic
AGGTTCCGGCATATATACAG+GGG 0.752458 2_4:-8768997 Msa0313410:intron
TCTGACACTAGCACTCATGG+AGG 0.799481 2_4:-8769382 Msa0313410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAATTTAAATAATATA+TGG + chr2_4:8769343-8769362 None:intergenic 0.0%
!! ATTTAAATTTAAATAATATA+TGG + chr2_4:8769343-8769362 None:intergenic 0.0%
!!! ATTTTTTATTTTTTTGCTTT+TGG - chr2_4:8767232-8767251 Msa0313410:CDS 10.0%
!!! TTTTTTATTTTTTTGCTTTT+GGG - chr2_4:8767233-8767252 Msa0313410:CDS 10.0%
!!! GATTTTATTATTGATATATT+AGG - chr2_4:8768665-8768684 Msa0313410:CDS 10.0%
!!! TTTTATTATTGATATATTAG+GGG - chr2_4:8768667-8768686 Msa0313410:CDS 10.0%
!! TATTAAAATTAAAAATACCT+TGG + chr2_4:8768850-8768869 None:intergenic 10.0%
!!! TCATAATAATAATAATTTGT+TGG - chr2_4:8770609-8770628 Msa0313410:five_prime_UTR 10.0%
!!! ATTTTTTATTTTTTTGCTTT+TGG - chr2_4:8767232-8767251 Msa0313410:CDS 10.0%
!!! TTTTTTATTTTTTTGCTTTT+GGG - chr2_4:8767233-8767252 Msa0313410:CDS 10.0%
!!! GATTTTATTATTGATATATT+AGG - chr2_4:8768665-8768684 Msa0313410:CDS 10.0%
!!! TTTTATTATTGATATATTAG+GGG - chr2_4:8768667-8768686 Msa0313410:CDS 10.0%
!! TATTAAAATTAAAAATACCT+TGG + chr2_4:8768850-8768869 None:intergenic 10.0%
!!! TCATAATAATAATAATTTGT+TGG - chr2_4:8770609-8770628 Msa0313410:five_prime_UTR 10.0%
!!! TTTTTATTTTTTTGCTTTTG+GGG - chr2_4:8767234-8767253 Msa0313410:CDS 15.0%
!!! AAAACAAAAAGTATTAAACT+TGG + chr2_4:8767335-8767354 None:intergenic 15.0%
!! TAACTTAATGAAATTGTATT+AGG - chr2_4:8769274-8769293 Msa0313410:intron 15.0%
!!! AATAATAATAATTTGTTGGA+TGG - chr2_4:8770613-8770632 Msa0313410:five_prime_UTR 15.0%
!!! TTTTTATTTTTTTGCTTTTG+GGG - chr2_4:8767234-8767253 Msa0313410:CDS 15.0%
!!! AAAACAAAAAGTATTAAACT+TGG + chr2_4:8767335-8767354 None:intergenic 15.0%
!! TAACTTAATGAAATTGTATT+AGG - chr2_4:8769274-8769293 Msa0313410:intron 15.0%
!!! AATAATAATAATTTGTTGGA+TGG - chr2_4:8770613-8770632 Msa0313410:five_prime_UTR 15.0%
!!! AAAAAAGAAACTTTTTCACA+TGG - chr2_4:8766870-8766889 Msa0313410:CDS 20.0%
!!! AAAAAGAAACTTTTTCACAT+GGG - chr2_4:8766871-8766890 Msa0313410:CDS 20.0%
!! GAAAATTGATTATGAGAAAA+GGG - chr2_4:8767294-8767313 Msa0313410:CDS 20.0%
!!! ATCTTGTTTTAGTTCATTTT+AGG - chr2_4:8767585-8767604 Msa0313410:CDS 20.0%
!!! TATGATGCATTAGTTTTTTT+TGG - chr2_4:8768100-8768119 Msa0313410:intron 20.0%
!!! CTTATAAATGTTTTAAAACG+TGG - chr2_4:8768203-8768222 Msa0313410:CDS 20.0%
!! ATCCACTATTATATTACTTT+AGG - chr2_4:8768319-8768338 Msa0313410:intron 20.0%
!! ATCCTAAAGTAATATAATAG+TGG + chr2_4:8768324-8768343 None:intergenic 20.0%
!! CATAATAATAGATAGAATTC+AGG + chr2_4:8768620-8768639 None:intergenic 20.0%
!! CAATAATAAAATCTTAGTCA+TGG + chr2_4:8768658-8768677 None:intergenic 20.0%
!!! ATATTTCACCTTTTCTTTTT+AGG - chr2_4:8768934-8768953 Msa0313410:intron 20.0%
!!! TATTTCACCTTTTCTTTTTA+GGG - chr2_4:8768935-8768954 Msa0313410:intron 20.0%
!! AAAGATCTTAGAAAATTACT+TGG + chr2_4:8769880-8769899 None:intergenic 20.0%
!! TGATAATATTAATCTCAATC+AGG - chr2_4:8770477-8770496 Msa0313410:CDS 20.0%
!! GATAATATTAATCTCAATCA+GGG - chr2_4:8770478-8770497 Msa0313410:CDS 20.0%
!!! AAAAAAGAAACTTTTTCACA+TGG - chr2_4:8766870-8766889 Msa0313410:CDS 20.0%
!!! AAAAAGAAACTTTTTCACAT+GGG - chr2_4:8766871-8766890 Msa0313410:CDS 20.0%
!! GAAAATTGATTATGAGAAAA+GGG - chr2_4:8767294-8767313 Msa0313410:CDS 20.0%
!!! ATCTTGTTTTAGTTCATTTT+AGG - chr2_4:8767585-8767604 Msa0313410:CDS 20.0%
!!! TATGATGCATTAGTTTTTTT+TGG - chr2_4:8768100-8768119 Msa0313410:intron 20.0%
!!! CTTATAAATGTTTTAAAACG+TGG - chr2_4:8768203-8768222 Msa0313410:CDS 20.0%
!! ATCCACTATTATATTACTTT+AGG - chr2_4:8768319-8768338 Msa0313410:intron 20.0%
!! ATCCTAAAGTAATATAATAG+TGG + chr2_4:8768324-8768343 None:intergenic 20.0%
!! CATAATAATAGATAGAATTC+AGG + chr2_4:8768620-8768639 None:intergenic 20.0%
!! CAATAATAAAATCTTAGTCA+TGG + chr2_4:8768658-8768677 None:intergenic 20.0%
!!! ATATTTCACCTTTTCTTTTT+AGG - chr2_4:8768934-8768953 Msa0313410:intron 20.0%
!!! TATTTCACCTTTTCTTTTTA+GGG - chr2_4:8768935-8768954 Msa0313410:intron 20.0%
!! AAAGATCTTAGAAAATTACT+TGG + chr2_4:8769880-8769899 None:intergenic 20.0%
!! TGATAATATTAATCTCAATC+AGG - chr2_4:8770477-8770496 Msa0313410:CDS 20.0%
!! GATAATATTAATCTCAATCA+GGG - chr2_4:8770478-8770497 Msa0313410:CDS 20.0%
!! TTTTAGCAATGTTAACAAGT+GGG + chr2_4:8766853-8766872 None:intergenic 25.0%
!!! TTTTTAGCAATGTTAACAAG+TGG + chr2_4:8766854-8766873 None:intergenic 25.0%
!!! AAAAGAAACTTTTTCACATG+GGG - chr2_4:8766872-8766891 Msa0313410:CDS 25.0%
! GGAAAATTGATTATGAGAAA+AGG - chr2_4:8767293-8767312 Msa0313410:CDS 25.0%
! TTCATTCAAACAAAAAAAGG+AGG + chr2_4:8767358-8767377 None:intergenic 25.0%
! TGGTTCATTCAAACAAAAAA+AGG + chr2_4:8767361-8767380 None:intergenic 25.0%
! AGAACAATAAACTAGGAAAA+GGG + chr2_4:8767413-8767432 None:intergenic 25.0%
! AAGAACAATAAACTAGGAAA+AGG + chr2_4:8767414-8767433 None:intergenic 25.0%
!! TTCCTAGTTTATTGTTCTTT+TGG - chr2_4:8767415-8767434 Msa0313410:CDS 25.0%
! AATTTCTATGTTAGATATCG+TGG - chr2_4:8767642-8767661 Msa0313410:CDS 25.0%
!!! AAGTAAATTTTTAGAGCAAC+AGG - chr2_4:8767667-8767686 Msa0313410:CDS 25.0%
!!! TGATGTTTTATTATAGCAAG+TGG - chr2_4:8767889-8767908 Msa0313410:intron 25.0%
! ATCATATGTGAAAATTACCA+GGG + chr2_4:8768086-8768105 None:intergenic 25.0%
! AGTATAATCAGTTATTCCTT+TGG - chr2_4:8768279-8768298 Msa0313410:intron 25.0%
! AATTACACGTATATCAGTTA+TGG + chr2_4:8769125-8769144 None:intergenic 25.0%
! ATATACGTGTAATTCTAATG+AGG - chr2_4:8769131-8769150 Msa0313410:intron 25.0%
! TAATATATGGAACACATCTA+CGG + chr2_4:8769330-8769349 None:intergenic 25.0%
! AAATAAGCTAGCTAAATATG+AGG - chr2_4:8769359-8769378 Msa0313410:CDS 25.0%
! ATATAAATCACTACAGTGAT+GGG + chr2_4:8769417-8769436 None:intergenic 25.0%
! AATATAAATCACTACAGTGA+TGG + chr2_4:8769418-8769437 None:intergenic 25.0%
! CACAAATATGAACATATAGA+CGG - chr2_4:8769487-8769506 Msa0313410:CDS 25.0%
! AACACCTATAATATGTGTTA+GGG + chr2_4:8769563-8769582 None:intergenic 25.0%
! AAACACCTATAATATGTGTT+AGG + chr2_4:8769564-8769583 None:intergenic 25.0%
! GGTCTTTCAAAACTAATTAA+TGG - chr2_4:8769599-8769618 Msa0313410:intron 25.0%
! TCAAAACTAATTAATGGCTA+TGG - chr2_4:8769605-8769624 Msa0313410:intron 25.0%
!! TTTTAGCAATGTTAACAAGT+GGG + chr2_4:8766853-8766872 None:intergenic 25.0%
!!! TTTTTAGCAATGTTAACAAG+TGG + chr2_4:8766854-8766873 None:intergenic 25.0%
!!! AAAAGAAACTTTTTCACATG+GGG - chr2_4:8766872-8766891 Msa0313410:CDS 25.0%
! GGAAAATTGATTATGAGAAA+AGG - chr2_4:8767293-8767312 Msa0313410:CDS 25.0%
! TTCATTCAAACAAAAAAAGG+AGG + chr2_4:8767358-8767377 None:intergenic 25.0%
! TGGTTCATTCAAACAAAAAA+AGG + chr2_4:8767361-8767380 None:intergenic 25.0%
! AGAACAATAAACTAGGAAAA+GGG + chr2_4:8767413-8767432 None:intergenic 25.0%
! AAGAACAATAAACTAGGAAA+AGG + chr2_4:8767414-8767433 None:intergenic 25.0%
!! TTCCTAGTTTATTGTTCTTT+TGG - chr2_4:8767415-8767434 Msa0313410:CDS 25.0%
! AATTTCTATGTTAGATATCG+TGG - chr2_4:8767642-8767661 Msa0313410:CDS 25.0%
!!! AAGTAAATTTTTAGAGCAAC+AGG - chr2_4:8767667-8767686 Msa0313410:CDS 25.0%
!!! TGATGTTTTATTATAGCAAG+TGG - chr2_4:8767889-8767908 Msa0313410:intron 25.0%
! ATCATATGTGAAAATTACCA+GGG + chr2_4:8768086-8768105 None:intergenic 25.0%
! AGTATAATCAGTTATTCCTT+TGG - chr2_4:8768279-8768298 Msa0313410:intron 25.0%
! AATTACACGTATATCAGTTA+TGG + chr2_4:8769125-8769144 None:intergenic 25.0%
! ATATACGTGTAATTCTAATG+AGG - chr2_4:8769131-8769150 Msa0313410:intron 25.0%
! TAATATATGGAACACATCTA+CGG + chr2_4:8769330-8769349 None:intergenic 25.0%
! AAATAAGCTAGCTAAATATG+AGG - chr2_4:8769359-8769378 Msa0313410:CDS 25.0%
! ATATAAATCACTACAGTGAT+GGG + chr2_4:8769417-8769436 None:intergenic 25.0%
! AATATAAATCACTACAGTGA+TGG + chr2_4:8769418-8769437 None:intergenic 25.0%
! CACAAATATGAACATATAGA+CGG - chr2_4:8769487-8769506 Msa0313410:CDS 25.0%
! AACACCTATAATATGTGTTA+GGG + chr2_4:8769563-8769582 None:intergenic 25.0%
! AAACACCTATAATATGTGTT+AGG + chr2_4:8769564-8769583 None:intergenic 25.0%
! GGTCTTTCAAAACTAATTAA+TGG - chr2_4:8769599-8769618 Msa0313410:intron 25.0%
! TCAAAACTAATTAATGGCTA+TGG - chr2_4:8769605-8769624 Msa0313410:intron 25.0%
GAAGAAGAAATAGCTGAATA+TGG + chr2_4:8766934-8766953 None:intergenic 30.0%
TTCTTTGGTAAAGAGATCAA+AGG + chr2_4:8767072-8767091 None:intergenic 30.0%
TTGATCTCTTTACCAAAGAA+AGG - chr2_4:8767072-8767091 Msa0313410:CDS 30.0%
!! ATTGTTGTTTATGTTCCACA+AGG - chr2_4:8767099-8767118 Msa0313410:CDS 30.0%
!!! TTTTTTTGCTTTTGGGGTTT+AGG - chr2_4:8767240-8767259 Msa0313410:CDS 30.0%
! TAGGTTTTTGTGCTTTTGTT+TGG - chr2_4:8767259-8767278 Msa0313410:CDS 30.0%
!!! TTTTGTTTGGTCTTGTAGTT+GGG - chr2_4:8767272-8767291 Msa0313410:CDS 30.0%
! AACCATAATGTGCTTTTGAT+TGG - chr2_4:8767376-8767395 Msa0313410:CDS 30.0%
CTCCAAAAGAACAATAAACT+AGG + chr2_4:8767420-8767439 None:intergenic 30.0%
!!! GTTTTAGTTCATTTTAGGCT+TGG - chr2_4:8767590-8767609 Msa0313410:CDS 30.0%
CTTGGATGAAATTGTGAAAA+AGG - chr2_4:8767608-8767627 Msa0313410:CDS 30.0%
TCATATGTGAAAATTACCAG+GGG + chr2_4:8768085-8768104 None:intergenic 30.0%
CATCATATGTGAAAATTACC+AGG + chr2_4:8768087-8768106 None:intergenic 30.0%
CAAATTCATAATGCTACCAA+AGG + chr2_4:8768298-8768317 None:intergenic 30.0%
TTATTGATATATTAGGGGTG+AGG - chr2_4:8768672-8768691 Msa0313410:CDS 30.0%
!! TTAGTGTTTGCTATAATCCA+AGG - chr2_4:8768830-8768849 Msa0313410:CDS 30.0%
CAACAATGAAAAGGAAAGAA+GGG + chr2_4:8768886-8768905 None:intergenic 30.0%
ATCAAAATGGAAATGCCTAT+TGG - chr2_4:8769211-8769230 Msa0313410:intron 30.0%
TATAAATCACTACAGTGATG+GGG + chr2_4:8769416-8769435 None:intergenic 30.0%
GTATGTAGAATTTCATGAAC+AGG - chr2_4:8769443-8769462 Msa0313410:CDS 30.0%
! TTTTTGTTCTTGCTTAGCTT+TGG - chr2_4:8769520-8769539 Msa0313410:intron 30.0%
GAAACCCTAACACATATTAT+AGG - chr2_4:8769556-8769575 Msa0313410:intron 30.0%
TTTGAAAGACCAGTTAACTA+TGG + chr2_4:8769590-8769609 None:intergenic 30.0%
AAACTAATTAATGGCTATGG+AGG - chr2_4:8769608-8769627 Msa0313410:intron 30.0%
CTTAGAAAATTACTTGGAAC+TGG + chr2_4:8769874-8769893 None:intergenic 30.0%
AATTCGTTTGTTTGACAGAT+GGG - chr2_4:8769957-8769976 Msa0313410:intron 30.0%
TTGCAAGGTCAAGAAATTAT+GGG - chr2_4:8770025-8770044 Msa0313410:intron 30.0%
TGAGCATTAATACTGTCATA+GGG + chr2_4:8770061-8770080 None:intergenic 30.0%
TTGAGCATTAATACTGTCAT+AGG + chr2_4:8770062-8770081 None:intergenic 30.0%
TGAATCTTTCAGATTCCAAA+AGG - chr2_4:8770207-8770226 Msa0313410:intron 30.0%
TTAATCCAGTTTCAAACTCT+CGG - chr2_4:8770452-8770471 Msa0313410:CDS 30.0%
! TACATATCTGAAGCTAAAAG+TGG - chr2_4:8770505-8770524 Msa0313410:CDS 30.0%
ACTAGATAAAATAGGCTTGT+GGG + chr2_4:8770545-8770564 None:intergenic 30.0%
!! ATAATTTGTTGGATGGTTCA+AGG - chr2_4:8770620-8770639 Msa0313410:five_prime_UTR 30.0%
GATATGGTTTCTTGTAAAAC+TGG - chr2_4:8770679-8770698 Msa0313410:five_prime_UTR 30.0%
GAAGAAGAAATAGCTGAATA+TGG + chr2_4:8766934-8766953 None:intergenic 30.0%
TTCTTTGGTAAAGAGATCAA+AGG + chr2_4:8767072-8767091 None:intergenic 30.0%
TTGATCTCTTTACCAAAGAA+AGG - chr2_4:8767072-8767091 Msa0313410:CDS 30.0%
!! ATTGTTGTTTATGTTCCACA+AGG - chr2_4:8767099-8767118 Msa0313410:CDS 30.0%
!!! TTTTTTTGCTTTTGGGGTTT+AGG - chr2_4:8767240-8767259 Msa0313410:CDS 30.0%
! TAGGTTTTTGTGCTTTTGTT+TGG - chr2_4:8767259-8767278 Msa0313410:CDS 30.0%
!!! TTTTGTTTGGTCTTGTAGTT+GGG - chr2_4:8767272-8767291 Msa0313410:CDS 30.0%
! AACCATAATGTGCTTTTGAT+TGG - chr2_4:8767376-8767395 Msa0313410:CDS 30.0%
CTCCAAAAGAACAATAAACT+AGG + chr2_4:8767420-8767439 None:intergenic 30.0%
!!! GTTTTAGTTCATTTTAGGCT+TGG - chr2_4:8767590-8767609 Msa0313410:CDS 30.0%
CTTGGATGAAATTGTGAAAA+AGG - chr2_4:8767608-8767627 Msa0313410:CDS 30.0%
TCATATGTGAAAATTACCAG+GGG + chr2_4:8768085-8768104 None:intergenic 30.0%
CATCATATGTGAAAATTACC+AGG + chr2_4:8768087-8768106 None:intergenic 30.0%
CAAATTCATAATGCTACCAA+AGG + chr2_4:8768298-8768317 None:intergenic 30.0%
TTATTGATATATTAGGGGTG+AGG - chr2_4:8768672-8768691 Msa0313410:CDS 30.0%
!! TTAGTGTTTGCTATAATCCA+AGG - chr2_4:8768830-8768849 Msa0313410:CDS 30.0%
CAACAATGAAAAGGAAAGAA+GGG + chr2_4:8768886-8768905 None:intergenic 30.0%
ATCAAAATGGAAATGCCTAT+TGG - chr2_4:8769211-8769230 Msa0313410:intron 30.0%
TATAAATCACTACAGTGATG+GGG + chr2_4:8769416-8769435 None:intergenic 30.0%
GTATGTAGAATTTCATGAAC+AGG - chr2_4:8769443-8769462 Msa0313410:CDS 30.0%
! TTTTTGTTCTTGCTTAGCTT+TGG - chr2_4:8769520-8769539 Msa0313410:intron 30.0%
GAAACCCTAACACATATTAT+AGG - chr2_4:8769556-8769575 Msa0313410:intron 30.0%
TTTGAAAGACCAGTTAACTA+TGG + chr2_4:8769590-8769609 None:intergenic 30.0%
AAACTAATTAATGGCTATGG+AGG - chr2_4:8769608-8769627 Msa0313410:intron 30.0%
CTTAGAAAATTACTTGGAAC+TGG + chr2_4:8769874-8769893 None:intergenic 30.0%
AATTCGTTTGTTTGACAGAT+GGG - chr2_4:8769957-8769976 Msa0313410:intron 30.0%
TTGCAAGGTCAAGAAATTAT+GGG - chr2_4:8770025-8770044 Msa0313410:intron 30.0%
TGAGCATTAATACTGTCATA+GGG + chr2_4:8770061-8770080 None:intergenic 30.0%
TTGAGCATTAATACTGTCAT+AGG + chr2_4:8770062-8770081 None:intergenic 30.0%
TGAATCTTTCAGATTCCAAA+AGG - chr2_4:8770207-8770226 Msa0313410:intron 30.0%
TTAATCCAGTTTCAAACTCT+CGG - chr2_4:8770452-8770471 Msa0313410:CDS 30.0%
! TACATATCTGAAGCTAAAAG+TGG - chr2_4:8770505-8770524 Msa0313410:CDS 30.0%
ACTAGATAAAATAGGCTTGT+GGG + chr2_4:8770545-8770564 None:intergenic 30.0%
!! ATAATTTGTTGGATGGTTCA+AGG - chr2_4:8770620-8770639 Msa0313410:five_prime_UTR 30.0%
GATATGGTTTCTTGTAAAAC+TGG - chr2_4:8770679-8770698 Msa0313410:five_prime_UTR 30.0%
!!! GAGGTTTTGTTGTGTAACTT+TGG + chr2_4:8766742-8766761 None:intergenic 35.0%
!!! GCATTTTTTCACAGTTTGTG+AGG + chr2_4:8766761-8766780 None:intergenic 35.0%
ACAACAATGCTTCCTTTCTT+TGG + chr2_4:8767087-8767106 None:intergenic 35.0%
GGAATATTACAAGCAGAAAC+AGG + chr2_4:8767150-8767169 None:intergenic 35.0%
!!! CTTTTGTTTGGTCTTGTAGT+TGG - chr2_4:8767271-8767290 Msa0313410:CDS 35.0%
! CACCAATCAAAAGCACATTA+TGG + chr2_4:8767381-8767400 None:intergenic 35.0%
!! CATAATGTGCTTTTGATTGG+TGG - chr2_4:8767379-8767398 Msa0313410:CDS 35.0%
!! TTTTGGAGAGACATGTATTG+AGG - chr2_4:8767432-8767451 Msa0313410:intron 35.0%
TTTGGAGAGACATGTATTGA+GGG - chr2_4:8767433-8767452 Msa0313410:intron 35.0%
! ATTGAGGGAACTTTGGATTT+TGG - chr2_4:8767448-8767467 Msa0313410:intron 35.0%
! AGTGTATTGTCAAGTCTTGT+TGG - chr2_4:8767526-8767545 Msa0313410:intron 35.0%
! TCCATATGCATGTTATTTGC+AGG - chr2_4:8767777-8767796 Msa0313410:intron 35.0%
TCCTGCAAATAACATGCATA+TGG + chr2_4:8767781-8767800 None:intergenic 35.0%
GTCAATGAAAAACTAGAGCA+AGG + chr2_4:8768135-8768154 None:intergenic 35.0%
CAAGTGCAACATAGCAAAAA+AGG + chr2_4:8768175-8768194 None:intergenic 35.0%
! AGAAAGCACAATTTGAACTC+GGG + chr2_4:8768237-8768256 None:intergenic 35.0%
! CAGAAAGCACAATTTGAACT+CGG + chr2_4:8768238-8768257 None:intergenic 35.0%
TCAAATTGTGCTTTCTGTCT+TGG - chr2_4:8768241-8768260 Msa0313410:CDS 35.0%
AATAAGAAGAAGCTTGTGTC+TGG - chr2_4:8768564-8768583 Msa0313410:intron 35.0%
!! TTGAAAAGTTCTGGTTCCTT+TGG - chr2_4:8768733-8768752 Msa0313410:intron 35.0%
GCAACAATGAAAAGGAAAGA+AGG + chr2_4:8768887-8768906 None:intergenic 35.0%
GAACTGACCCTAAAAAGAAA+AGG + chr2_4:8768945-8768964 None:intergenic 35.0%
!!! TCTTTTTAGGGTCAGTTCTT+CGG - chr2_4:8768947-8768966 Msa0313410:intron 35.0%
CAGCAGAATAAGAACAATCA+AGG + chr2_4:8769007-8769026 None:intergenic 35.0%
CTTGATTGTTCTTATTCTGC+TGG - chr2_4:8769005-8769024 Msa0313410:CDS 35.0%
CACGTATATCAGTTATGGAT+AGG + chr2_4:8769120-8769139 None:intergenic 35.0%
AATTGCTGGAATAAGTGATG+TGG - chr2_4:8769169-8769188 Msa0313410:intron 35.0%
AATGGAAATGCCTATTGGTA+TGG - chr2_4:8769216-8769235 Msa0313410:intron 35.0%
ATGTTCTTTCTCATCCTTAC+AGG - chr2_4:8769696-8769715 Msa0313410:intron 35.0%
AGGCATCAAGGCATAATAAT+AGG - chr2_4:8769737-8769756 Msa0313410:intron 35.0%
GGCATCAAGGCATAATAATA+GGG - chr2_4:8769738-8769757 Msa0313410:intron 35.0%
ATAATAATAGGGTTTCCCCA+TGG - chr2_4:8769749-8769768 Msa0313410:intron 35.0%
TAATAATAGGGTTTCCCCAT+GGG - chr2_4:8769750-8769769 Msa0313410:intron 35.0%
TGATGAAGTAAATCCAATCC+TGG + chr2_4:8769839-8769858 None:intergenic 35.0%
CAATTCGTTTGTTTGACAGA+TGG - chr2_4:8769956-8769975 Msa0313410:intron 35.0%
GGAATCATTAAGATTCCGAA+AGG - chr2_4:8770000-8770019 Msa0313410:intron 35.0%
CTTGCAAGGTCAAGAAATTA+TGG - chr2_4:8770024-8770043 Msa0313410:intron 35.0%
TATGATGGTTATCCAATGCT+CGG - chr2_4:8770316-8770335 Msa0313410:CDS 35.0%
TGGAACATTAACACAGATGA+TGG + chr2_4:8770424-8770443 None:intergenic 35.0%
CACTAGATAAAATAGGCTTG+TGG + chr2_4:8770546-8770565 None:intergenic 35.0%
! CACAAGCCTATTTTATCTAG+TGG - chr2_4:8770544-8770563 Msa0313410:five_prime_UTR 35.0%
GCTAGTCCACTAGATAAAAT+AGG + chr2_4:8770553-8770572 None:intergenic 35.0%
GATGAGAGACAATCAAGATA+TGG - chr2_4:8770663-8770682 Msa0313410:five_prime_UTR 35.0%
!!! GAGGTTTTGTTGTGTAACTT+TGG + chr2_4:8766742-8766761 None:intergenic 35.0%
!!! GCATTTTTTCACAGTTTGTG+AGG + chr2_4:8766761-8766780 None:intergenic 35.0%
ACAACAATGCTTCCTTTCTT+TGG + chr2_4:8767087-8767106 None:intergenic 35.0%
GGAATATTACAAGCAGAAAC+AGG + chr2_4:8767150-8767169 None:intergenic 35.0%
!!! CTTTTGTTTGGTCTTGTAGT+TGG - chr2_4:8767271-8767290 Msa0313410:CDS 35.0%
! CACCAATCAAAAGCACATTA+TGG + chr2_4:8767381-8767400 None:intergenic 35.0%
!! CATAATGTGCTTTTGATTGG+TGG - chr2_4:8767379-8767398 Msa0313410:CDS 35.0%
!! TTTTGGAGAGACATGTATTG+AGG - chr2_4:8767432-8767451 Msa0313410:intron 35.0%
TTTGGAGAGACATGTATTGA+GGG - chr2_4:8767433-8767452 Msa0313410:intron 35.0%
! ATTGAGGGAACTTTGGATTT+TGG - chr2_4:8767448-8767467 Msa0313410:intron 35.0%
! AGTGTATTGTCAAGTCTTGT+TGG - chr2_4:8767526-8767545 Msa0313410:intron 35.0%
! TCCATATGCATGTTATTTGC+AGG - chr2_4:8767777-8767796 Msa0313410:intron 35.0%
TCCTGCAAATAACATGCATA+TGG + chr2_4:8767781-8767800 None:intergenic 35.0%
GTCAATGAAAAACTAGAGCA+AGG + chr2_4:8768135-8768154 None:intergenic 35.0%
CAAGTGCAACATAGCAAAAA+AGG + chr2_4:8768175-8768194 None:intergenic 35.0%
! AGAAAGCACAATTTGAACTC+GGG + chr2_4:8768237-8768256 None:intergenic 35.0%
! CAGAAAGCACAATTTGAACT+CGG + chr2_4:8768238-8768257 None:intergenic 35.0%
TCAAATTGTGCTTTCTGTCT+TGG - chr2_4:8768241-8768260 Msa0313410:CDS 35.0%
AATAAGAAGAAGCTTGTGTC+TGG - chr2_4:8768564-8768583 Msa0313410:intron 35.0%
!! TTGAAAAGTTCTGGTTCCTT+TGG - chr2_4:8768733-8768752 Msa0313410:intron 35.0%
GCAACAATGAAAAGGAAAGA+AGG + chr2_4:8768887-8768906 None:intergenic 35.0%
GAACTGACCCTAAAAAGAAA+AGG + chr2_4:8768945-8768964 None:intergenic 35.0%
!!! TCTTTTTAGGGTCAGTTCTT+CGG - chr2_4:8768947-8768966 Msa0313410:intron 35.0%
CAGCAGAATAAGAACAATCA+AGG + chr2_4:8769007-8769026 None:intergenic 35.0%
CTTGATTGTTCTTATTCTGC+TGG - chr2_4:8769005-8769024 Msa0313410:CDS 35.0%
CACGTATATCAGTTATGGAT+AGG + chr2_4:8769120-8769139 None:intergenic 35.0%
AATTGCTGGAATAAGTGATG+TGG - chr2_4:8769169-8769188 Msa0313410:intron 35.0%
AATGGAAATGCCTATTGGTA+TGG - chr2_4:8769216-8769235 Msa0313410:intron 35.0%
ATGTTCTTTCTCATCCTTAC+AGG - chr2_4:8769696-8769715 Msa0313410:intron 35.0%
AGGCATCAAGGCATAATAAT+AGG - chr2_4:8769737-8769756 Msa0313410:intron 35.0%
GGCATCAAGGCATAATAATA+GGG - chr2_4:8769738-8769757 Msa0313410:intron 35.0%
ATAATAATAGGGTTTCCCCA+TGG - chr2_4:8769749-8769768 Msa0313410:intron 35.0%
TAATAATAGGGTTTCCCCAT+GGG - chr2_4:8769750-8769769 Msa0313410:intron 35.0%
TGATGAAGTAAATCCAATCC+TGG + chr2_4:8769839-8769858 None:intergenic 35.0%
CAATTCGTTTGTTTGACAGA+TGG - chr2_4:8769956-8769975 Msa0313410:intron 35.0%
GGAATCATTAAGATTCCGAA+AGG - chr2_4:8770000-8770019 Msa0313410:intron 35.0%
CTTGCAAGGTCAAGAAATTA+TGG - chr2_4:8770024-8770043 Msa0313410:intron 35.0%
TATGATGGTTATCCAATGCT+CGG - chr2_4:8770316-8770335 Msa0313410:CDS 35.0%
TGGAACATTAACACAGATGA+TGG + chr2_4:8770424-8770443 None:intergenic 35.0%
CACTAGATAAAATAGGCTTG+TGG + chr2_4:8770546-8770565 None:intergenic 35.0%
! CACAAGCCTATTTTATCTAG+TGG - chr2_4:8770544-8770563 Msa0313410:five_prime_UTR 35.0%
GCTAGTCCACTAGATAAAAT+AGG + chr2_4:8770553-8770572 None:intergenic 35.0%
GATGAGAGACAATCAAGATA+TGG - chr2_4:8770663-8770682 Msa0313410:five_prime_UTR 35.0%
AATCGATCTCAACACTACAG+AGG - chr2_4:8766897-8766916 Msa0313410:CDS 40.0%
TCATCTTCTTCTTCTCACTC+TGG - chr2_4:8766952-8766971 Msa0313410:CDS 40.0%
AAACAAACAGAACCTTGAGG+AGG + chr2_4:8767024-8767043 None:intergenic 40.0%
TCCTCAAGGTTCTGTTTGTT+TGG - chr2_4:8767023-8767042 Msa0313410:CDS 40.0%
TCCAAACAAACAGAACCTTG+AGG + chr2_4:8767027-8767046 None:intergenic 40.0%
! GTTCTGTTTGTTTGGAGCTT+TGG - chr2_4:8767031-8767050 Msa0313410:CDS 40.0%
AGAACACGACAGAAAACATG+AGG + chr2_4:8767174-8767193 None:intergenic 40.0%
GACATGTATTGAGGGAACTT+TGG - chr2_4:8767441-8767460 Msa0313410:intron 40.0%
!!! TGCTTGTGCTTTTTCTGTGT+AGG - chr2_4:8767484-8767503 Msa0313410:intron 40.0%
!! CTTGTTGGTTCCTGAAAATC+AGG - chr2_4:8767541-8767560 Msa0313410:intron 40.0%
! ATAAGCCTCACCTGATTTTC+AGG + chr2_4:8767554-8767573 None:intergenic 40.0%
GAGCAACAGGCTAATTGTAT+TGG - chr2_4:8767680-8767699 Msa0313410:CDS 40.0%
AGCAAGTGGAGCAAAATGTT+CGG - chr2_4:8767903-8767922 Msa0313410:intron 40.0%
AGAGTCTTGCAGAACATATG+GGG + chr2_4:8767992-8768011 None:intergenic 40.0%
GAGAGTCTTGCAGAACATAT+GGG + chr2_4:8767993-8768012 None:intergenic 40.0%
TGAGAGTCTTGCAGAACATA+TGG + chr2_4:8767994-8768013 None:intergenic 40.0%
TATGTGAAAATTACCAGGGG+AGG + chr2_4:8768082-8768101 None:intergenic 40.0%
TTTGCTACAAGCTCTTGTGA+AGG + chr2_4:8768362-8768381 None:intergenic 40.0%
TTCACAAGAGCTTGTAGCAA+AGG - chr2_4:8768361-8768380 Msa0313410:CDS 40.0%
ACATACCCCTGTATATATGC+CGG + chr2_4:8768412-8768431 None:intergenic 40.0%
TAAGCGTTCAATGACACAAC+TGG + chr2_4:8768466-8768485 None:intergenic 40.0%
! AGTTGTGTCATTGAACGCTT+AGG - chr2_4:8768465-8768484 Msa0313410:intron 40.0%
! GTTGTGTCATTGAACGCTTA+GGG - chr2_4:8768466-8768485 Msa0313410:intron 40.0%
! TTGTGTCATTGAACGCTTAG+GGG - chr2_4:8768467-8768486 Msa0313410:intron 40.0%
! GTTTGATTTCCTGTGTTCGT+TGG - chr2_4:8768489-8768508 Msa0313410:intron 40.0%
!! GTGATGCTGTGTTGTTTCTT+AGG - chr2_4:8768586-8768605 Msa0313410:CDS 40.0%
TGATATATTAGGGGTGAGGA+TGG - chr2_4:8768676-8768695 Msa0313410:CDS 40.0%
!! AAAAGTTCTGGTTCCTTTGG+AGG - chr2_4:8768736-8768755 Msa0313410:intron 40.0%
!! AAAGTTCTGGTTCCTTTGGA+GGG - chr2_4:8768737-8768756 Msa0313410:intron 40.0%
!! CTCTTCAAGAACTTGTTGAC+AGG + chr2_4:8768984-8769003 None:intergenic 40.0%
GTTCTTATTCTGCTGGAATG+AGG - chr2_4:8769012-8769031 Msa0313410:CDS 40.0%
ACGTGTAATTCTAATGAGGC+AGG - chr2_4:8769135-8769154 Msa0313410:intron 40.0%
AGGTTCACTGGATTAATTGC+TGG - chr2_4:8769155-8769174 Msa0313410:intron 40.0%
TTAGATGGCCAGGATCAAAA+TGG - chr2_4:8769198-8769217 Msa0313410:intron 40.0%
!! AGGCATTTCCATTTTGATCC+TGG + chr2_4:8769209-8769228 None:intergenic 40.0%
GTGTTTCAGCCATAGTTAAC+TGG - chr2_4:8769578-8769597 Msa0313410:intron 40.0%
CTTTCTCATCCTTACAGGTA+AGG - chr2_4:8769701-8769720 Msa0313410:intron 40.0%
TTCCAATTCCAGTAACCTGA+TGG - chr2_4:8769795-8769814 Msa0313410:intron 40.0%
GTTTGTTTGACAGATGGGAT+TGG - chr2_4:8769962-8769981 Msa0313410:intron 40.0%
GTATTAATGCTCAAAGTCCC+CGG - chr2_4:8770068-8770087 Msa0313410:intron 40.0%
AGGAAATATCAGAATGCAGC+CGG - chr2_4:8770147-8770166 Msa0313410:intron 40.0%
! GCTTCTGATTTTCCCTGTAA+CGG - chr2_4:8770172-8770191 Msa0313410:intron 40.0%
AGATTCCAAAAGGTCTTGCA+AGG - chr2_4:8770217-8770236 Msa0313410:CDS 40.0%
ATGATGGTTATCCAATGCTC+GGG - chr2_4:8770317-8770336 Msa0313410:CDS 40.0%
TTGCATGCATCTGTTACATC+TGG - chr2_4:8770385-8770404 Msa0313410:CDS 40.0%
ATCTGTGTTAATGTTCCAGC+AGG - chr2_4:8770426-8770445 Msa0313410:CDS 40.0%
! TCATACCGAGAGTTTGAAAC+TGG + chr2_4:8770460-8770479 None:intergenic 40.0%
GATAAAATAGGCTTGTGGGA+AGG + chr2_4:8770541-8770560 None:intergenic 40.0%
!! TTTATCTAGTGGACTAGCTC+TGG - chr2_4:8770555-8770574 Msa0313410:five_prime_UTR 40.0%
TTAACCGATGACACACACAT+TGG - chr2_4:8770724-8770743 Msa0313410:five_prime_UTR 40.0%
AATCGATCTCAACACTACAG+AGG - chr2_4:8766897-8766916 Msa0313410:CDS 40.0%
TCATCTTCTTCTTCTCACTC+TGG - chr2_4:8766952-8766971 Msa0313410:CDS 40.0%
AAACAAACAGAACCTTGAGG+AGG + chr2_4:8767024-8767043 None:intergenic 40.0%
TCCTCAAGGTTCTGTTTGTT+TGG - chr2_4:8767023-8767042 Msa0313410:CDS 40.0%
TCCAAACAAACAGAACCTTG+AGG + chr2_4:8767027-8767046 None:intergenic 40.0%
! GTTCTGTTTGTTTGGAGCTT+TGG - chr2_4:8767031-8767050 Msa0313410:CDS 40.0%
AGAACACGACAGAAAACATG+AGG + chr2_4:8767174-8767193 None:intergenic 40.0%
GACATGTATTGAGGGAACTT+TGG - chr2_4:8767441-8767460 Msa0313410:intron 40.0%
!!! TGCTTGTGCTTTTTCTGTGT+AGG - chr2_4:8767484-8767503 Msa0313410:intron 40.0%
!! CTTGTTGGTTCCTGAAAATC+AGG - chr2_4:8767541-8767560 Msa0313410:intron 40.0%
! ATAAGCCTCACCTGATTTTC+AGG + chr2_4:8767554-8767573 None:intergenic 40.0%
GAGCAACAGGCTAATTGTAT+TGG - chr2_4:8767680-8767699 Msa0313410:CDS 40.0%
AGCAAGTGGAGCAAAATGTT+CGG - chr2_4:8767903-8767922 Msa0313410:intron 40.0%
AGAGTCTTGCAGAACATATG+GGG + chr2_4:8767992-8768011 None:intergenic 40.0%
GAGAGTCTTGCAGAACATAT+GGG + chr2_4:8767993-8768012 None:intergenic 40.0%
TGAGAGTCTTGCAGAACATA+TGG + chr2_4:8767994-8768013 None:intergenic 40.0%
TATGTGAAAATTACCAGGGG+AGG + chr2_4:8768082-8768101 None:intergenic 40.0%
TTTGCTACAAGCTCTTGTGA+AGG + chr2_4:8768362-8768381 None:intergenic 40.0%
TTCACAAGAGCTTGTAGCAA+AGG - chr2_4:8768361-8768380 Msa0313410:CDS 40.0%
ACATACCCCTGTATATATGC+CGG + chr2_4:8768412-8768431 None:intergenic 40.0%
TAAGCGTTCAATGACACAAC+TGG + chr2_4:8768466-8768485 None:intergenic 40.0%
! AGTTGTGTCATTGAACGCTT+AGG - chr2_4:8768465-8768484 Msa0313410:intron 40.0%
! GTTGTGTCATTGAACGCTTA+GGG - chr2_4:8768466-8768485 Msa0313410:intron 40.0%
! TTGTGTCATTGAACGCTTAG+GGG - chr2_4:8768467-8768486 Msa0313410:intron 40.0%
! GTTTGATTTCCTGTGTTCGT+TGG - chr2_4:8768489-8768508 Msa0313410:intron 40.0%
!! GTGATGCTGTGTTGTTTCTT+AGG - chr2_4:8768586-8768605 Msa0313410:CDS 40.0%
TGATATATTAGGGGTGAGGA+TGG - chr2_4:8768676-8768695 Msa0313410:CDS 40.0%
!! AAAAGTTCTGGTTCCTTTGG+AGG - chr2_4:8768736-8768755 Msa0313410:intron 40.0%
!! AAAGTTCTGGTTCCTTTGGA+GGG - chr2_4:8768737-8768756 Msa0313410:intron 40.0%
!! CTCTTCAAGAACTTGTTGAC+AGG + chr2_4:8768984-8769003 None:intergenic 40.0%
GTTCTTATTCTGCTGGAATG+AGG - chr2_4:8769012-8769031 Msa0313410:CDS 40.0%
ACGTGTAATTCTAATGAGGC+AGG - chr2_4:8769135-8769154 Msa0313410:intron 40.0%
AGGTTCACTGGATTAATTGC+TGG - chr2_4:8769155-8769174 Msa0313410:intron 40.0%
TTAGATGGCCAGGATCAAAA+TGG - chr2_4:8769198-8769217 Msa0313410:intron 40.0%
!! AGGCATTTCCATTTTGATCC+TGG + chr2_4:8769209-8769228 None:intergenic 40.0%
GTGTTTCAGCCATAGTTAAC+TGG - chr2_4:8769578-8769597 Msa0313410:intron 40.0%
CTTTCTCATCCTTACAGGTA+AGG - chr2_4:8769701-8769720 Msa0313410:intron 40.0%
TTCCAATTCCAGTAACCTGA+TGG - chr2_4:8769795-8769814 Msa0313410:intron 40.0%
GTTTGTTTGACAGATGGGAT+TGG - chr2_4:8769962-8769981 Msa0313410:intron 40.0%
GTATTAATGCTCAAAGTCCC+CGG - chr2_4:8770068-8770087 Msa0313410:intron 40.0%
AGGAAATATCAGAATGCAGC+CGG - chr2_4:8770147-8770166 Msa0313410:intron 40.0%
! GCTTCTGATTTTCCCTGTAA+CGG - chr2_4:8770172-8770191 Msa0313410:intron 40.0%
AGATTCCAAAAGGTCTTGCA+AGG - chr2_4:8770217-8770236 Msa0313410:CDS 40.0%
ATGATGGTTATCCAATGCTC+GGG - chr2_4:8770317-8770336 Msa0313410:CDS 40.0%
TTGCATGCATCTGTTACATC+TGG - chr2_4:8770385-8770404 Msa0313410:CDS 40.0%
ATCTGTGTTAATGTTCCAGC+AGG - chr2_4:8770426-8770445 Msa0313410:CDS 40.0%
! TCATACCGAGAGTTTGAAAC+TGG + chr2_4:8770460-8770479 None:intergenic 40.0%
GATAAAATAGGCTTGTGGGA+AGG + chr2_4:8770541-8770560 None:intergenic 40.0%
!! TTTATCTAGTGGACTAGCTC+TGG - chr2_4:8770555-8770574 Msa0313410:five_prime_UTR 40.0%
TTAACCGATGACACACACAT+TGG - chr2_4:8770724-8770743 Msa0313410:five_prime_UTR 40.0%
GTGGAAGAGAGAGAAAGTGA+AGG - chr2_4:8766678-8766697 Msa0313410:CDS 45.0%
CACTTCTACTTCAGCAGCTA+TGG - chr2_4:8766981-8767000 Msa0313410:CDS 45.0%
! GCTTGTTCAAAGTGTCCTTG+TGG + chr2_4:8767117-8767136 None:intergenic 45.0%
ACACGACAGAAAACATGAGG+TGG + chr2_4:8767171-8767190 None:intergenic 45.0%
!!! TGCTTTTTCTGTGTAGGCTG+AGG - chr2_4:8767490-8767509 Msa0313410:intron 45.0%
! TTTTCTGTGTAGGCTGAGGA+AGG - chr2_4:8767494-8767513 Msa0313410:intron 45.0%
TGGTTCCTGAAAATCAGGTG+AGG - chr2_4:8767546-8767565 Msa0313410:CDS 45.0%
GCAAGTGGAGCAAAATGTTC+GGG - chr2_4:8767904-8767923 Msa0313410:intron 45.0%
TGGAGCAAAATGTTCGGGAA+GGG - chr2_4:8767909-8767928 Msa0313410:intron 45.0%
AGGGGTAATTGATGCTGATG+CGG - chr2_4:8767928-8767947 Msa0313410:intron 45.0%
AATTGATGCTGATGCGGAAG+AGG - chr2_4:8767934-8767953 Msa0313410:intron 45.0%
GCACAATTTGAACTCGGGTA+AGG + chr2_4:8768232-8768251 None:intergenic 45.0%
! TTTAGGATTACAGCCAGCAG+AGG - chr2_4:8768336-8768355 Msa0313410:intron 45.0%
CTTGTAGCAAAGGATCTGCA+TGG - chr2_4:8768371-8768390 Msa0313410:CDS 45.0%
GAGGTTCCGGCATATATACA+GGG - chr2_4:8768403-8768422 Msa0313410:CDS 45.0%
AGGTTCCGGCATATATACAG+GGG - chr2_4:8768404-8768423 Msa0313410:CDS 45.0%
AGGATGGAGAACTGAGACTA+GGG - chr2_4:8768692-8768711 Msa0313410:CDS 45.0%
AACTGAGACTAGGGATTCGT+AGG - chr2_4:8768701-8768720 Msa0313410:CDS 45.0%
ACTGAGACTAGGGATTCGTA+GGG - chr2_4:8768702-8768721 Msa0313410:CDS 45.0%
AGGATCCAATTGCATACCAG+AGG + chr2_4:8768764-8768783 None:intergenic 45.0%
TCTGGTATGCAATTGGATCC+TGG - chr2_4:8768763-8768782 Msa0313410:intron 45.0%
CACAGCGAGCAACAATGAAA+AGG + chr2_4:8768895-8768914 None:intergenic 45.0%
! CTTTTCATTGTTGCTCGCTG+TGG - chr2_4:8768893-8768912 Msa0313410:intron 45.0%
ATTCTGCTGGAATGAGGTTC+AGG - chr2_4:8769018-8769037 Msa0313410:CDS 45.0%
TTCTAATGAGGCAGGTTCAC+TGG - chr2_4:8769143-8769162 Msa0313410:intron 45.0%
GTGATGTGGATCCTGTTAGA+TGG - chr2_4:8769183-8769202 Msa0313410:intron 45.0%
TTTGATCCTGGCCATCTAAC+AGG + chr2_4:8769197-8769216 None:intergenic 45.0%
TCTCATCCTTACAGGTAAGG+TGG - chr2_4:8769704-8769723 Msa0313410:intron 45.0%
CTCATCCTTACAGGTAAGGT+GGG - chr2_4:8769705-8769724 Msa0313410:intron 45.0%
ATCATCCCACCTTACCTGTA+AGG + chr2_4:8769713-8769732 None:intergenic 45.0%
GGTAAGGTGGGATGATATAG+AGG - chr2_4:8769717-8769736 Msa0313410:intron 45.0%
!! GGGATGATATAGAGGCATCA+AGG - chr2_4:8769725-8769744 Msa0313410:intron 45.0%
GAATTGGAAGCAGAACCAGA+TGG + chr2_4:8769784-8769803 None:intergenic 45.0%
TGCCATCAGGTTACTGGAAT+TGG + chr2_4:8769800-8769819 None:intergenic 45.0%
TCTTCAAACTAGCTGCCATC+AGG + chr2_4:8769813-8769832 None:intergenic 45.0%
! TGATGGCAGCTAGTTTGAAG+AGG - chr2_4:8769812-8769831 Msa0313410:intron 45.0%
AGTTTGAAGAGGACCAGGAT+TGG - chr2_4:8769823-8769842 Msa0313410:intron 45.0%
TGTGTCAATGTTGTCGCATG+AGG + chr2_4:8769938-8769957 None:intergenic 45.0%
AGATTCCGAAAGGTCTTGCA+AGG - chr2_4:8770010-8770029 Msa0313410:intron 45.0%
CTTGACCTTGCAAGACCTTT+CGG + chr2_4:8770018-8770037 None:intergenic 45.0%
ACCTCCCTAGCTCATATAAC+CGG + chr2_4:8770090-8770109 None:intergenic 45.0%
TATCCCGGTTCAAACTGTTC+CGG - chr2_4:8770112-8770131 Msa0313410:intron 45.0%
AATCCCGGAACAGTTTGAAC+CGG + chr2_4:8770119-8770138 None:intergenic 45.0%
ATTTCCTGTTGCAGCAATCC+CGG + chr2_4:8770134-8770153 None:intergenic 45.0%
AAATATCAGAATGCAGCCGG+CGG - chr2_4:8770150-8770169 Msa0313410:intron 45.0%
! GATTTTCCCTGTAACGGCAT+AGG - chr2_4:8770178-8770197 Msa0313410:intron 45.0%
! CTTGACCTTGCAAGACCTTT+TGG + chr2_4:8770018-8770037 None:intergenic 45.0%
GGTTGTGTTGGACGTTATGA+TGG - chr2_4:8770301-8770320 Msa0313410:CDS 45.0%
AAACTGGATTAACAGCCTGC+TGG + chr2_4:8770444-8770463 None:intergenic 45.0%
!! CTGGAAGGCACAACTTCTTT+TGG - chr2_4:8770574-8770593 Msa0313410:five_prime_UTR 45.0%
AAAACTGGCTGCAGACTCTT+CGG - chr2_4:8770694-8770713 Msa0313410:five_prime_UTR 45.0%
GTGGAAGAGAGAGAAAGTGA+AGG - chr2_4:8766678-8766697 Msa0313410:CDS 45.0%
CACTTCTACTTCAGCAGCTA+TGG - chr2_4:8766981-8767000 Msa0313410:CDS 45.0%
! GCTTGTTCAAAGTGTCCTTG+TGG + chr2_4:8767117-8767136 None:intergenic 45.0%
ACACGACAGAAAACATGAGG+TGG + chr2_4:8767171-8767190 None:intergenic 45.0%
!!! TGCTTTTTCTGTGTAGGCTG+AGG - chr2_4:8767490-8767509 Msa0313410:intron 45.0%
! TTTTCTGTGTAGGCTGAGGA+AGG - chr2_4:8767494-8767513 Msa0313410:intron 45.0%
TGGTTCCTGAAAATCAGGTG+AGG - chr2_4:8767546-8767565 Msa0313410:CDS 45.0%
GCAAGTGGAGCAAAATGTTC+GGG - chr2_4:8767904-8767923 Msa0313410:intron 45.0%
TGGAGCAAAATGTTCGGGAA+GGG - chr2_4:8767909-8767928 Msa0313410:intron 45.0%
AGGGGTAATTGATGCTGATG+CGG - chr2_4:8767928-8767947 Msa0313410:intron 45.0%
AATTGATGCTGATGCGGAAG+AGG - chr2_4:8767934-8767953 Msa0313410:intron 45.0%
GCACAATTTGAACTCGGGTA+AGG + chr2_4:8768232-8768251 None:intergenic 45.0%
! TTTAGGATTACAGCCAGCAG+AGG - chr2_4:8768336-8768355 Msa0313410:intron 45.0%
CTTGTAGCAAAGGATCTGCA+TGG - chr2_4:8768371-8768390 Msa0313410:CDS 45.0%
GAGGTTCCGGCATATATACA+GGG - chr2_4:8768403-8768422 Msa0313410:CDS 45.0%
AGGTTCCGGCATATATACAG+GGG - chr2_4:8768404-8768423 Msa0313410:CDS 45.0%
AGGATGGAGAACTGAGACTA+GGG - chr2_4:8768692-8768711 Msa0313410:CDS 45.0%
AACTGAGACTAGGGATTCGT+AGG - chr2_4:8768701-8768720 Msa0313410:CDS 45.0%
ACTGAGACTAGGGATTCGTA+GGG - chr2_4:8768702-8768721 Msa0313410:CDS 45.0%
AGGATCCAATTGCATACCAG+AGG + chr2_4:8768764-8768783 None:intergenic 45.0%
TCTGGTATGCAATTGGATCC+TGG - chr2_4:8768763-8768782 Msa0313410:intron 45.0%
CACAGCGAGCAACAATGAAA+AGG + chr2_4:8768895-8768914 None:intergenic 45.0%
! CTTTTCATTGTTGCTCGCTG+TGG - chr2_4:8768893-8768912 Msa0313410:intron 45.0%
ATTCTGCTGGAATGAGGTTC+AGG - chr2_4:8769018-8769037 Msa0313410:CDS 45.0%
TTCTAATGAGGCAGGTTCAC+TGG - chr2_4:8769143-8769162 Msa0313410:intron 45.0%
GTGATGTGGATCCTGTTAGA+TGG - chr2_4:8769183-8769202 Msa0313410:intron 45.0%
TTTGATCCTGGCCATCTAAC+AGG + chr2_4:8769197-8769216 None:intergenic 45.0%
TCTCATCCTTACAGGTAAGG+TGG - chr2_4:8769704-8769723 Msa0313410:intron 45.0%
CTCATCCTTACAGGTAAGGT+GGG - chr2_4:8769705-8769724 Msa0313410:intron 45.0%
ATCATCCCACCTTACCTGTA+AGG + chr2_4:8769713-8769732 None:intergenic 45.0%
GGTAAGGTGGGATGATATAG+AGG - chr2_4:8769717-8769736 Msa0313410:intron 45.0%
!! GGGATGATATAGAGGCATCA+AGG - chr2_4:8769725-8769744 Msa0313410:intron 45.0%
GAATTGGAAGCAGAACCAGA+TGG + chr2_4:8769784-8769803 None:intergenic 45.0%
TGCCATCAGGTTACTGGAAT+TGG + chr2_4:8769800-8769819 None:intergenic 45.0%
TCTTCAAACTAGCTGCCATC+AGG + chr2_4:8769813-8769832 None:intergenic 45.0%
! TGATGGCAGCTAGTTTGAAG+AGG - chr2_4:8769812-8769831 Msa0313410:intron 45.0%
AGTTTGAAGAGGACCAGGAT+TGG - chr2_4:8769823-8769842 Msa0313410:intron 45.0%
TGTGTCAATGTTGTCGCATG+AGG + chr2_4:8769938-8769957 None:intergenic 45.0%
AGATTCCGAAAGGTCTTGCA+AGG - chr2_4:8770010-8770029 Msa0313410:intron 45.0%
CTTGACCTTGCAAGACCTTT+CGG + chr2_4:8770018-8770037 None:intergenic 45.0%
ACCTCCCTAGCTCATATAAC+CGG + chr2_4:8770090-8770109 None:intergenic 45.0%
TATCCCGGTTCAAACTGTTC+CGG - chr2_4:8770112-8770131 Msa0313410:intron 45.0%
AATCCCGGAACAGTTTGAAC+CGG + chr2_4:8770119-8770138 None:intergenic 45.0%
ATTTCCTGTTGCAGCAATCC+CGG + chr2_4:8770134-8770153 None:intergenic 45.0%
AAATATCAGAATGCAGCCGG+CGG - chr2_4:8770150-8770169 Msa0313410:intron 45.0%
! GATTTTCCCTGTAACGGCAT+AGG - chr2_4:8770178-8770197 Msa0313410:intron 45.0%
! CTTGACCTTGCAAGACCTTT+TGG + chr2_4:8770018-8770037 None:intergenic 45.0%
GGTTGTGTTGGACGTTATGA+TGG - chr2_4:8770301-8770320 Msa0313410:CDS 45.0%
AAACTGGATTAACAGCCTGC+TGG + chr2_4:8770444-8770463 None:intergenic 45.0%
!! CTGGAAGGCACAACTTCTTT+TGG - chr2_4:8770574-8770593 Msa0313410:five_prime_UTR 45.0%
AAAACTGGCTGCAGACTCTT+CGG - chr2_4:8770694-8770713 Msa0313410:five_prime_UTR 45.0%
!!! ATTTTATTATTGATATATTA+GGG - chr2_4:8768666-8768685 Msa0313410:CDS 5.0%
!!! ATTTTATTATTGATATATTA+GGG - chr2_4:8768666-8768685 Msa0313410:CDS 5.0%
ACAGAACCTTGAGGAGGAAG+AGG + chr2_4:8767018-8767037 None:intergenic 50.0%
GTGGAGCAAAATGTTCGGGA+AGG - chr2_4:8767908-8767927 Msa0313410:intron 50.0%
GGAGCAAAATGTTCGGGAAG+GGG - chr2_4:8767910-8767929 Msa0313410:intron 50.0%
GCTTCTGACACTAGCACTCA+TGG - chr2_4:8768016-8768035 Msa0313410:intron 50.0%
TCTGACACTAGCACTCATGG+AGG - chr2_4:8768019-8768038 Msa0313410:intron 50.0%
AGCAAAGGATCTGCATGGCT+CGG - chr2_4:8768376-8768395 Msa0313410:CDS 50.0%
GGAGGTTCCGGCATATATAC+AGG - chr2_4:8768402-8768421 Msa0313410:CDS 50.0%
TTTCCTGTGTTCGTTGGAGC+AGG - chr2_4:8768495-8768514 Msa0313410:intron 50.0%
GTTGTGAGCAAATGCCTCCT+TGG + chr2_4:8768525-8768544 None:intergenic 50.0%
!! AGGAGGCATTTGCTCACAAC+TGG - chr2_4:8768525-8768544 Msa0313410:intron 50.0%
!! GGAGGCATTTGCTCACAACT+GGG - chr2_4:8768526-8768545 Msa0313410:intron 50.0%
GAGGATGGAGAACTGAGACT+AGG - chr2_4:8768691-8768710 Msa0313410:CDS 50.0%
GCGGTGCAGTTGAAAAGTTC+TGG - chr2_4:8768724-8768743 Msa0313410:intron 50.0%
AGGGTCCTCTGGTATGCAAT+TGG - chr2_4:8768756-8768775 Msa0313410:intron 50.0%
! ATTGGATCCTGGCTCTCTCA+TGG - chr2_4:8768774-8768793 Msa0313410:intron 50.0%
ACAACATCCATGAGAGAGCC+AGG + chr2_4:8768784-8768803 None:intergenic 50.0%
TGCCTATTGGTATGGAGCTG+TGG - chr2_4:8769224-8769243 Msa0313410:intron 50.0%
GACCACAGCTCCATACCAAT+AGG + chr2_4:8769229-8769248 None:intergenic 50.0%
AGATGGCTCGATTTCCCATG+GGG + chr2_4:8769767-8769786 None:intergenic 50.0%
CAGATGGCTCGATTTCCCAT+GGG + chr2_4:8769768-8769787 None:intergenic 50.0%
ACTAGCTGCCATCAGGTTAC+TGG + chr2_4:8769806-8769825 None:intergenic 50.0%
! CAGCTAGTTTGAAGAGGACC+AGG - chr2_4:8769818-8769837 Msa0313410:intron 50.0%
AATGTTGTCGCATGAGGACG+AGG + chr2_4:8769932-8769951 None:intergenic 50.0%
! GGATTGGAGCGTCAGACTTT+GGG - chr2_4:8769978-8769997 Msa0313410:intron 50.0%
! GATTGGAGCGTCAGACTTTG+GGG - chr2_4:8769979-8769998 Msa0313410:intron 50.0%
AGTCCCCGGTTATATGAGCT+AGG - chr2_4:8770082-8770101 Msa0313410:intron 50.0%
GTCCCCGGTTATATGAGCTA+GGG - chr2_4:8770083-8770102 Msa0313410:intron 50.0%
CTCCCTAGCTCATATAACCG+GGG + chr2_4:8770088-8770107 None:intergenic 50.0%
CCTCCCTAGCTCATATAACC+GGG + chr2_4:8770089-8770108 None:intergenic 50.0%
ATCCCGGTTCAAACTGTTCC+GGG - chr2_4:8770113-8770132 Msa0313410:intron 50.0%
ATCCCGGAACAGTTTGAACC+GGG + chr2_4:8770118-8770137 None:intergenic 50.0%
CCAAAGCCTATGCCGTTACA+GGG + chr2_4:8770187-8770206 None:intergenic 50.0%
ACCAAAGCCTATGCCGTTAC+AGG + chr2_4:8770188-8770207 None:intergenic 50.0%
TCCAACACAACCACTTCCAC+GGG + chr2_4:8770293-8770312 None:intergenic 50.0%
GTCCAACACAACCACTTCCA+CGG + chr2_4:8770294-8770313 None:intergenic 50.0%
!! TCTAGTGGACTAGCTCTGGA+AGG - chr2_4:8770559-8770578 Msa0313410:five_prime_UTR 50.0%
AAACTGGCTGCAGACTCTTC+GGG - chr2_4:8770695-8770714 Msa0313410:five_prime_UTR 50.0%
ACCGATGACACACACATTGG+CGG - chr2_4:8770727-8770746 Msa0313410:five_prime_UTR 50.0%
ACAGAACCTTGAGGAGGAAG+AGG + chr2_4:8767018-8767037 None:intergenic 50.0%
GTGGAGCAAAATGTTCGGGA+AGG - chr2_4:8767908-8767927 Msa0313410:intron 50.0%
GGAGCAAAATGTTCGGGAAG+GGG - chr2_4:8767910-8767929 Msa0313410:intron 50.0%
GCTTCTGACACTAGCACTCA+TGG - chr2_4:8768016-8768035 Msa0313410:intron 50.0%
TCTGACACTAGCACTCATGG+AGG - chr2_4:8768019-8768038 Msa0313410:intron 50.0%
AGCAAAGGATCTGCATGGCT+CGG - chr2_4:8768376-8768395 Msa0313410:CDS 50.0%
GGAGGTTCCGGCATATATAC+AGG - chr2_4:8768402-8768421 Msa0313410:CDS 50.0%
TTTCCTGTGTTCGTTGGAGC+AGG - chr2_4:8768495-8768514 Msa0313410:intron 50.0%
GTTGTGAGCAAATGCCTCCT+TGG + chr2_4:8768525-8768544 None:intergenic 50.0%
!! AGGAGGCATTTGCTCACAAC+TGG - chr2_4:8768525-8768544 Msa0313410:intron 50.0%
!! GGAGGCATTTGCTCACAACT+GGG - chr2_4:8768526-8768545 Msa0313410:intron 50.0%
GAGGATGGAGAACTGAGACT+AGG - chr2_4:8768691-8768710 Msa0313410:CDS 50.0%
GCGGTGCAGTTGAAAAGTTC+TGG - chr2_4:8768724-8768743 Msa0313410:intron 50.0%
AGGGTCCTCTGGTATGCAAT+TGG - chr2_4:8768756-8768775 Msa0313410:intron 50.0%
! ATTGGATCCTGGCTCTCTCA+TGG - chr2_4:8768774-8768793 Msa0313410:intron 50.0%
ACAACATCCATGAGAGAGCC+AGG + chr2_4:8768784-8768803 None:intergenic 50.0%
TGCCTATTGGTATGGAGCTG+TGG - chr2_4:8769224-8769243 Msa0313410:intron 50.0%
GACCACAGCTCCATACCAAT+AGG + chr2_4:8769229-8769248 None:intergenic 50.0%
AGATGGCTCGATTTCCCATG+GGG + chr2_4:8769767-8769786 None:intergenic 50.0%
CAGATGGCTCGATTTCCCAT+GGG + chr2_4:8769768-8769787 None:intergenic 50.0%
ACTAGCTGCCATCAGGTTAC+TGG + chr2_4:8769806-8769825 None:intergenic 50.0%
! CAGCTAGTTTGAAGAGGACC+AGG - chr2_4:8769818-8769837 Msa0313410:intron 50.0%
AATGTTGTCGCATGAGGACG+AGG + chr2_4:8769932-8769951 None:intergenic 50.0%
! GGATTGGAGCGTCAGACTTT+GGG - chr2_4:8769978-8769997 Msa0313410:intron 50.0%
! GATTGGAGCGTCAGACTTTG+GGG - chr2_4:8769979-8769998 Msa0313410:intron 50.0%
AGTCCCCGGTTATATGAGCT+AGG - chr2_4:8770082-8770101 Msa0313410:intron 50.0%
GTCCCCGGTTATATGAGCTA+GGG - chr2_4:8770083-8770102 Msa0313410:intron 50.0%
CTCCCTAGCTCATATAACCG+GGG + chr2_4:8770088-8770107 None:intergenic 50.0%
CCTCCCTAGCTCATATAACC+GGG + chr2_4:8770089-8770108 None:intergenic 50.0%
ATCCCGGTTCAAACTGTTCC+GGG - chr2_4:8770113-8770132 Msa0313410:intron 50.0%
ATCCCGGAACAGTTTGAACC+GGG + chr2_4:8770118-8770137 None:intergenic 50.0%
CCAAAGCCTATGCCGTTACA+GGG + chr2_4:8770187-8770206 None:intergenic 50.0%
ACCAAAGCCTATGCCGTTAC+AGG + chr2_4:8770188-8770207 None:intergenic 50.0%
TCCAACACAACCACTTCCAC+GGG + chr2_4:8770293-8770312 None:intergenic 50.0%
GTCCAACACAACCACTTCCA+CGG + chr2_4:8770294-8770313 None:intergenic 50.0%
!! TCTAGTGGACTAGCTCTGGA+AGG - chr2_4:8770559-8770578 Msa0313410:five_prime_UTR 50.0%
AAACTGGCTGCAGACTCTTC+GGG - chr2_4:8770695-8770714 Msa0313410:five_prime_UTR 50.0%
ACCGATGACACACACATTGG+CGG - chr2_4:8770727-8770746 Msa0313410:five_prime_UTR 50.0%
GAACCTTGAGGAGGAAGAGG+TGG + chr2_4:8767015-8767034 None:intergenic 55.0%
! GAGCTTTGGCATGCTTGTGC+TGG - chr2_4:8767045-8767064 Msa0313410:CDS 55.0%
TGATGCTGATGCGGAAGAGG+AGG - chr2_4:8767937-8767956 Msa0313410:intron 55.0%
TGAAGACTGCTTTCCTCCCC+TGG - chr2_4:8768066-8768085 Msa0313410:intron 55.0%
TGTCCTGCTCCAACGAACAC+AGG + chr2_4:8768501-8768520 None:intergenic 55.0%
GGCATTTGCTCACAACTGGG+TGG - chr2_4:8768529-8768548 Msa0313410:intron 55.0%
GAGACTAGGGATTCGTAGGG+CGG - chr2_4:8768705-8768724 Msa0313410:CDS 55.0%
CATACCAGAGGACCCTCCAA+AGG + chr2_4:8768752-8768771 None:intergenic 55.0%
CTGAAGATGCTGCAGAGCGA+AGG - chr2_4:8769054-8769073 Msa0313410:CDS 55.0%
GTGGATCCTGTTAGATGGCC+AGG - chr2_4:8769188-8769207 Msa0313410:intron 55.0%
AGCAGCACATTAGAGGGCAG+GGG + chr2_4:8769392-8769411 None:intergenic 55.0%
CAGCAGCACATTAGAGGGCA+GGG + chr2_4:8769393-8769412 None:intergenic 55.0%
TGGGGCAGCAGCACATTAGA+GGG + chr2_4:8769398-8769417 None:intergenic 55.0%
ATGGGGCAGCAGCACATTAG+AGG + chr2_4:8769399-8769418 None:intergenic 55.0%
CCAGATGGCTCGATTTCCCA+TGG + chr2_4:8769769-8769788 None:intergenic 55.0%
CCATGGGAAATCGAGCCATC+TGG - chr2_4:8769766-8769785 Msa0313410:intron 55.0%
CGCATGAGGACGAGGTAAGA+TGG + chr2_4:8769924-8769943 None:intergenic 55.0%
! GGGATTGGAGCGTCAGACTT+TGG - chr2_4:8769977-8769996 Msa0313410:intron 55.0%
CCCGGTTATATGAGCTAGGG+AGG - chr2_4:8770086-8770105 Msa0313410:intron 55.0%
TGTTCCGGGATTGCTGCAAC+AGG - chr2_4:8770127-8770146 Msa0313410:intron 55.0%
CAGGGAAAATCAGAAGCCGC+CGG + chr2_4:8770169-8770188 None:intergenic 55.0%
CCCTGTAACGGCATAGGCTT+TGG - chr2_4:8770184-8770203 Msa0313410:intron 55.0%
ATTCTTCCGTGCCCACCCTA+CGG - chr2_4:8770247-8770266 Msa0313410:CDS 55.0%
TCAAACGAGGCTCGTCCGTA+GGG + chr2_4:8770265-8770284 None:intergenic 55.0%
! CCATTTCTGGACCCGAGCAT+TGG + chr2_4:8770331-8770350 None:intergenic 55.0%
CCAATGCTCGGGTCCAGAAA+TGG - chr2_4:8770328-8770347 Msa0313410:CDS 55.0%
TGCTCGGGTCCAGAAATGGA+TGG - chr2_4:8770332-8770351 Msa0313410:CDS 55.0%
CTGTGCAGGCCATCCATTTC+TGG + chr2_4:8770344-8770363 None:intergenic 55.0%
GCCGCCAATGTGTGTGTCAT+CGG + chr2_4:8770731-8770750 None:intergenic 55.0%
GATGACACACACATTGGCGG+CGG - chr2_4:8770730-8770749 Msa0313410:five_prime_UTR 55.0%
GAACCTTGAGGAGGAAGAGG+TGG + chr2_4:8767015-8767034 None:intergenic 55.0%
! GAGCTTTGGCATGCTTGTGC+TGG - chr2_4:8767045-8767064 Msa0313410:CDS 55.0%
TGATGCTGATGCGGAAGAGG+AGG - chr2_4:8767937-8767956 Msa0313410:intron 55.0%
TGAAGACTGCTTTCCTCCCC+TGG - chr2_4:8768066-8768085 Msa0313410:intron 55.0%
TGTCCTGCTCCAACGAACAC+AGG + chr2_4:8768501-8768520 None:intergenic 55.0%
GGCATTTGCTCACAACTGGG+TGG - chr2_4:8768529-8768548 Msa0313410:intron 55.0%
GAGACTAGGGATTCGTAGGG+CGG - chr2_4:8768705-8768724 Msa0313410:CDS 55.0%
CATACCAGAGGACCCTCCAA+AGG + chr2_4:8768752-8768771 None:intergenic 55.0%
CTGAAGATGCTGCAGAGCGA+AGG - chr2_4:8769054-8769073 Msa0313410:CDS 55.0%
GTGGATCCTGTTAGATGGCC+AGG - chr2_4:8769188-8769207 Msa0313410:intron 55.0%
AGCAGCACATTAGAGGGCAG+GGG + chr2_4:8769392-8769411 None:intergenic 55.0%
CAGCAGCACATTAGAGGGCA+GGG + chr2_4:8769393-8769412 None:intergenic 55.0%
TGGGGCAGCAGCACATTAGA+GGG + chr2_4:8769398-8769417 None:intergenic 55.0%
ATGGGGCAGCAGCACATTAG+AGG + chr2_4:8769399-8769418 None:intergenic 55.0%
CCAGATGGCTCGATTTCCCA+TGG + chr2_4:8769769-8769788 None:intergenic 55.0%
CCATGGGAAATCGAGCCATC+TGG - chr2_4:8769766-8769785 Msa0313410:intron 55.0%
CGCATGAGGACGAGGTAAGA+TGG + chr2_4:8769924-8769943 None:intergenic 55.0%
! GGGATTGGAGCGTCAGACTT+TGG - chr2_4:8769977-8769996 Msa0313410:intron 55.0%
CCCGGTTATATGAGCTAGGG+AGG - chr2_4:8770086-8770105 Msa0313410:intron 55.0%
TGTTCCGGGATTGCTGCAAC+AGG - chr2_4:8770127-8770146 Msa0313410:intron 55.0%
CAGGGAAAATCAGAAGCCGC+CGG + chr2_4:8770169-8770188 None:intergenic 55.0%
CCCTGTAACGGCATAGGCTT+TGG - chr2_4:8770184-8770203 Msa0313410:intron 55.0%
ATTCTTCCGTGCCCACCCTA+CGG - chr2_4:8770247-8770266 Msa0313410:CDS 55.0%
TCAAACGAGGCTCGTCCGTA+GGG + chr2_4:8770265-8770284 None:intergenic 55.0%
! CCATTTCTGGACCCGAGCAT+TGG + chr2_4:8770331-8770350 None:intergenic 55.0%
CCAATGCTCGGGTCCAGAAA+TGG - chr2_4:8770328-8770347 Msa0313410:CDS 55.0%
TGCTCGGGTCCAGAAATGGA+TGG - chr2_4:8770332-8770351 Msa0313410:CDS 55.0%
CTGTGCAGGCCATCCATTTC+TGG + chr2_4:8770344-8770363 None:intergenic 55.0%
GCCGCCAATGTGTGTGTCAT+CGG + chr2_4:8770731-8770750 None:intergenic 55.0%
GATGACACACACATTGGCGG+CGG - chr2_4:8770730-8770749 Msa0313410:five_prime_UTR 55.0%
CCTTGAGGAGGAAGAGGTGG+AGG + chr2_4:8767012-8767031 None:intergenic 60.0%
CCTCCACCTCTTCCTCCTCA+AGG - chr2_4:8767009-8767028 Msa0313410:CDS 60.0%
CAGTCTTCAGCAGCTCGACG+AGG + chr2_4:8768055-8768074 None:intergenic 60.0%
GCTCTTGTGAAGGCCTCTGC+TGG + chr2_4:8768352-8768371 None:intergenic 60.0%
! AGGATCTGCATGGCTCGGAG+TGG - chr2_4:8768381-8768400 Msa0313410:CDS 60.0%
! ATCTGCATGGCTCGGAGTGG+AGG - chr2_4:8768384-8768403 Msa0313410:CDS 60.0%
! ATGGCTCGGAGTGGAGGTTC+CGG - chr2_4:8768390-8768409 Msa0313410:CDS 60.0%
TCGTTGGAGCAGGACAGCCA+AGG - chr2_4:8768505-8768524 Msa0313410:intron 60.0%
TTGGAGCAGGACAGCCAAGG+AGG - chr2_4:8768508-8768527 Msa0313410:intron 60.0%
! GGTTCCTTTGGAGGGTCCTC+TGG - chr2_4:8768745-8768764 Msa0313410:intron 60.0%
GCAGCACATTAGAGGGCAGG+GGG + chr2_4:8769391-8769410 None:intergenic 60.0%
GCAGCAGCACATTAGAGGGC+AGG + chr2_4:8769394-8769413 None:intergenic 60.0%
!! GAGCTAGGGAGGTGCTATCC+CGG - chr2_4:8770097-8770116 Msa0313410:intron 60.0%
GTCAAACGAGGCTCGTCCGT+AGG + chr2_4:8770266-8770285 None:intergenic 60.0%
TTTGACGAGGCCCGTGGAAG+TGG - chr2_4:8770280-8770299 Msa0313410:CDS 60.0%
GCCCGTGGAAGTGGTTGTGT+TGG - chr2_4:8770289-8770308 Msa0313410:CDS 60.0%
GCAGCGTCATGCATCTGTGC+AGG + chr2_4:8770358-8770377 None:intergenic 60.0%
CCTTGAGGAGGAAGAGGTGG+AGG + chr2_4:8767012-8767031 None:intergenic 60.0%
CCTCCACCTCTTCCTCCTCA+AGG - chr2_4:8767009-8767028 Msa0313410:CDS 60.0%
CAGTCTTCAGCAGCTCGACG+AGG + chr2_4:8768055-8768074 None:intergenic 60.0%
GCTCTTGTGAAGGCCTCTGC+TGG + chr2_4:8768352-8768371 None:intergenic 60.0%
! AGGATCTGCATGGCTCGGAG+TGG - chr2_4:8768381-8768400 Msa0313410:CDS 60.0%
! ATCTGCATGGCTCGGAGTGG+AGG - chr2_4:8768384-8768403 Msa0313410:CDS 60.0%
! ATGGCTCGGAGTGGAGGTTC+CGG - chr2_4:8768390-8768409 Msa0313410:CDS 60.0%
TCGTTGGAGCAGGACAGCCA+AGG - chr2_4:8768505-8768524 Msa0313410:intron 60.0%
TTGGAGCAGGACAGCCAAGG+AGG - chr2_4:8768508-8768527 Msa0313410:intron 60.0%
! GGTTCCTTTGGAGGGTCCTC+TGG - chr2_4:8768745-8768764 Msa0313410:intron 60.0%
GCAGCACATTAGAGGGCAGG+GGG + chr2_4:8769391-8769410 None:intergenic 60.0%
GCAGCAGCACATTAGAGGGC+AGG + chr2_4:8769394-8769413 None:intergenic 60.0%
!! GAGCTAGGGAGGTGCTATCC+CGG - chr2_4:8770097-8770116 Msa0313410:intron 60.0%
GTCAAACGAGGCTCGTCCGT+AGG + chr2_4:8770266-8770285 None:intergenic 60.0%
TTTGACGAGGCCCGTGGAAG+TGG - chr2_4:8770280-8770299 Msa0313410:CDS 60.0%
GCCCGTGGAAGTGGTTGTGT+TGG - chr2_4:8770289-8770308 Msa0313410:CDS 60.0%
GCAGCGTCATGCATCTGTGC+AGG + chr2_4:8770358-8770377 None:intergenic 60.0%
ACGAGGCTCGTCCGTAGGGT+GGG + chr2_4:8770261-8770280 None:intergenic 65.0%
AACGAGGCTCGTCCGTAGGG+TGG + chr2_4:8770262-8770281 None:intergenic 65.0%
CGGACGAGCCTCGTTTGACG+AGG - chr2_4:8770267-8770286 Msa0313410:CDS 65.0%
TCCACGGGCCTCGTCAAACG+AGG + chr2_4:8770278-8770297 None:intergenic 65.0%
ACGAGGCTCGTCCGTAGGGT+GGG + chr2_4:8770261-8770280 None:intergenic 65.0%
AACGAGGCTCGTCCGTAGGG+TGG + chr2_4:8770262-8770281 None:intergenic 65.0%
CGGACGAGCCTCGTTTGACG+AGG - chr2_4:8770267-8770286 Msa0313410:CDS 65.0%
TCCACGGGCCTCGTCAAACG+AGG + chr2_4:8770278-8770297 None:intergenic 65.0%
GCTCGTCCGTAGGGTGGGCA+CGG + chr2_4:8770256-8770275 None:intergenic 70.0%
GCCTCGTTTGACGAGGCCCG+TGG - chr2_4:8770274-8770293 Msa0313410:CDS 70.0%
GCTCGTCCGTAGGGTGGGCA+CGG + chr2_4:8770256-8770275 None:intergenic 70.0%
GCCTCGTTTGACGAGGCCCG+TGG - chr2_4:8770274-8770293 Msa0313410:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 8766667 8770756 8766667 ID=Msa0313410;Name=Msa0313410
chr2_4 mRNA 8766667 8770756 8766667 ID=Msa0313410-mRNA-1;Parent=Msa0313410;Name=Msa0313410-mRNA-1;_AED=0.10;_eAED=0.10;_QI=222|1|0.9|1|1|1|10|0|680
chr2_4 exon 8766667 8767448 8766667 ID=Msa0313410-mRNA-1:exon:3356;Parent=Msa0313410-mRNA-1
chr2_4 exon 8767543 8767705 8767543 ID=Msa0313410-mRNA-1:exon:3355;Parent=Msa0313410-mRNA-1
chr2_4 exon 8768191 8768266 8768191 ID=Msa0313410-mRNA-1:exon:3354;Parent=Msa0313410-mRNA-1
chr2_4 exon 8768348 8768467 8768348 ID=Msa0313410-mRNA-1:exon:3353;Parent=Msa0313410-mRNA-1
chr2_4 exon 8768572 8768736 8768572 ID=Msa0313410-mRNA-1:exon:3352;Parent=Msa0313410-mRNA-1
chr2_4 exon 8768816 8768906 8768816 ID=Msa0313410-mRNA-1:exon:3351;Parent=Msa0313410-mRNA-1
chr2_4 exon 8768998 8769082 8768998 ID=Msa0313410-mRNA-1:exon:3350;Parent=Msa0313410-mRNA-1
chr2_4 exon 8769336 8769518 8769336 ID=Msa0313410-mRNA-1:exon:3349;Parent=Msa0313410-mRNA-1
chr2_4 exon 8769861 8769917 8769861 ID=Msa0313410-mRNA-1:exon:3348;Parent=Msa0313410-mRNA-1
chr2_4 exon 8770214 8770756 8770214 ID=Msa0313410-mRNA-1:exon:3347;Parent=Msa0313410-mRNA-1
chr2_4 five_prime_UTR 8770535 8770756 8770535 ID=Msa0313410-mRNA-1:five_prime_utr;Parent=Msa0313410-mRNA-1
chr2_4 CDS 8770214 8770534 8770214 ID=Msa0313410-mRNA-1:cds;Parent=Msa0313410-mRNA-1
chr2_4 CDS 8769861 8769917 8769861 ID=Msa0313410-mRNA-1:cds;Parent=Msa0313410-mRNA-1
chr2_4 CDS 8769336 8769518 8769336 ID=Msa0313410-mRNA-1:cds;Parent=Msa0313410-mRNA-1
chr2_4 CDS 8768998 8769082 8768998 ID=Msa0313410-mRNA-1:cds;Parent=Msa0313410-mRNA-1
chr2_4 CDS 8768816 8768906 8768816 ID=Msa0313410-mRNA-1:cds;Parent=Msa0313410-mRNA-1
chr2_4 CDS 8768572 8768736 8768572 ID=Msa0313410-mRNA-1:cds;Parent=Msa0313410-mRNA-1
chr2_4 CDS 8768348 8768467 8768348 ID=Msa0313410-mRNA-1:cds;Parent=Msa0313410-mRNA-1
chr2_4 CDS 8768191 8768266 8768191 ID=Msa0313410-mRNA-1:cds;Parent=Msa0313410-mRNA-1
chr2_4 CDS 8767543 8767705 8767543 ID=Msa0313410-mRNA-1:cds;Parent=Msa0313410-mRNA-1
chr2_4 CDS 8766667 8767448 8766667 ID=Msa0313410-mRNA-1:cds;Parent=Msa0313410-mRNA-1
Gene Sequence

>Msa0313410

ATGGGGTTAATCGATCTCAACACTACAGAGGATGATGAAACACCATATTCAGCTATTTCTTCTTCATCTTCTTCTTCTCACTCTGGTATAAGCACTTCTACTTCAGCAGCTATGGTTGTTCCTCCACCTCTTCCTCCTCAAGGTTCTGTTTGTTTGGAGCTTTGGCATGCTTGTGCTGGTCCTTTGATCTCTTTACCAAAGAAAGGAAGCATTGTTGTTTATGTTCCACAAGGACACTTTGAACAAGCTCATGATTTTCCTGTTTCTGCTTGTAATATTCCACCTCATGTTTTCTGTCGTGTTCTTGATGTTAAGCTTCATGCTGAGGAAGGAAGTGATGAAGTGTATTGTCAAGTCTTGTTGGTTCCTGAAAATCAGCAAGTGGAGCAAAATGTTCGGGAAGGGGTAATTGATGCTGATGCGGAAGAGGAGGATACTGAAGCTATTGTGAAGTCAACAACACCCCATATGTTCTGCAAGACTCTCACAGCTTCTGACACTAGCACTCATGGAGGATTCTCAGTGCCTCGTCGAGCTGCTGAAGACTGCTTTCCTCCCCTGGATTACAGCCAGCAGAGGCCTTCACAAGAGCTTGTAGCAAAGGATCTGCATGGCTCGGAGTGGAGGTTCCGGCATATATACAGGGGACAGCCAAGGAGGCATTTGCTCACAACTGGGTGGAGTGCATTTGTTAATAAGAAGAAGCTTGTGTCTGGTGATGCTGTGTTGTTTCTTAGGGGTGAGGATGGAGAACTGAGACTAGGGATTCGTAGGGCGGTGCAGTTGAAAAGTTCTGGTTCCTTTGGAGGGTCCTCTGGTATGCAATTGGATCCTGGCTCTCTCATGGATGTTGTGAATGCTTTATCTAAAAGATCTGCATTTAGTGTTTGCTATAATCCAAGGGTCAGTTCTTCGGAATTCATCATTCCTGTCAACAAGTTCTTGAAGAGCCTTGATTGTTCTTATTCTGCTGGAATGAGGTTCAGGATGCGTTTTGAAACTGAAGATGCTGCAGAGCGAAGGTTCACTGGATTAATTGCTGGAATAAGTGATGTGGATCCTGTTAGATGGCCAGGATCAAAATGGAAATGCCTATTGGTAAGGTGGGATGATATAGAGGCATCAAGGCATAATAATAGGGTTTCCCCATGGGAAATCGAGCCATCTGGTTCTGCTTCCAATTCCAGTAACCTGATGGCAGCTAGTTTGAAGAGGACCAGGATTGGATTTACTTCATCAAAGCTAGAATTTCCAGTTCCAAATGGGATTGGAGCGTCAGACTTTGGGGAATCATTAAGATTCCGAAAGGTCTTGCAAGGTCAAGAAATTATGGGCATGAATACTCCCTATGACAGTATTAATGCTCAAAGTCCCCGGTTATATGAGCTAGGGAGGTGCTATCCCGGTTCAAACTGTTCCGGGATTGCTGCAACAGGAAATATCAGAATGCAGCCGGCGGCTTCTGATTTTCCCTGTAACGGCATAGGCTTTGGTGAATCTTTCAGATTCCAAAAGGTCTTGCAAGGTCAAGAAATTCTTCCGTGCCCACCCTACGGACGAGCCTCGTTTGACGAGGCCCGTGGAAGTGGTTGTGTTGGACGTTATGATGGTTATCCAATGCTCGGGTCCAGAAATGGATGGCCTGCACAGATGCATGACGCTGCTTCACATTTGCATGCATCTGTTACATCTGGACAAGTTTCGTCTCCATCATCTGTGTTAATGTTCCAGCAGGCTGTTAATCCAGTTTCAAACTCTCGGTATGATAATATTAATCTCAATCAGGGTTCATACATATCTGAAGCTAAAAGTGGAATGTTTGCGCCTTCCCACAAGCCTATTTTATCTAGTGGACTAGCTCTGGAAGGCACAACTTCTTTTGGTGTGCATGATTTTCATAATAATAATAATTTGTTGGATGGTTCAAGGTCTCGTGATTCAGTGTTAGCGATGAGAGACAATCAAGATATGGTTTCTTGTAAAACTGGCTGCAGACTCTTCGGGTTTTCATTAACCGATGACACACACATTGGCGGCGGTTGA
Protein sequence

>Msa0313410

MGLIDLNTTEDDETPYSAISSSSSSSHSGISTSTSAAMVVPPPLPPQGSVCLELWHACAGPLISLPKKGSIVVYVPQGHFEQAHDFPVSACNIPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPENQQVEQNVREGVIDADAEEEDTEAIVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGSEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKSSGSFGGSSGMQLDPGSLMDVVNALSKRSAFSVCYNPRVSSSEFIIPVNKFLKSLDCSYSAGMRFRMRFETEDAAERRFTGLIAGISDVDPVRWPGSKWKCLLVRWDDIEASRHNNRVSPWEIEPSGSASNSSNLMAASLKRTRIGFTSSKLEFPVPNGIGASDFGESLRFRKVLQGQEIMGMNTPYDSINAQSPRLYELGRCYPGSNCSGIAATGNIRMQPAASDFPCNGIGFGESFRFQKVLQGQEILPCPPYGRASFDEARGSGCVGRYDGYPMLGSRNGWPAQMHDAASHLHASVTSGQVSSPSSVLMFQQAVNPVSNSRYDNINLNQGSYISEAKSGMFAPSHKPILSSGLALEGTTSFGVHDFHNNNNLLDGSRSRDSVLAMRDNQDMVSCKTGCRLFGFSLTDDTHIGGG*