AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0419860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0419860 MtrunA17_Chr3g0118321 95.936 566 22 1 1 565 1 566 0.0 1130
Msa0419860 MtrunA17_Chr3g0118331 86.549 565 76 0 1 565 1 565 0.0 1013
Msa0419860 MtrunA17_Chr3g0118351 79.882 338 44 2 251 565 1 337 0.0 563
Msa0419860 MtrunA17_Chr8g0382691 49.818 550 269 5 17 564 26 570 0.0 561
Msa0419860 MtrunA17_Chr3g0118341 85.128 195 28 1 1 194 1 195 5.71e-121 355
Msa0419860 MtrunA17_Chr5g0436461 32.682 563 318 17 6 544 7 532 3.69e-75 248
Msa0419860 MtrunA17_Chr5g0429511 33.511 564 321 20 4 545 6 537 5.92e-72 240
Msa0419860 MtrunA17_Chr7g0237491 32.230 574 320 16 7 542 14 556 9.11e-72 240
Msa0419860 MtrunA17_Chr5g0437681 30.465 581 331 18 1 544 1 545 4.32e-71 238
Msa0419860 MtrunA17_Chr5g0404361 31.634 569 327 19 1 544 58 589 9.58e-70 236
Msa0419860 MtrunA17_Chr7g0238351 33.043 575 322 20 2 540 8 555 1.10e-69 234
Msa0419860 MtrunA17_Chr7g0237441 31.937 573 325 17 4 540 11 554 7.51e-69 233
Msa0419860 MtrunA17_Chr5g0404341 30.976 594 338 22 1 561 12 566 6.73e-68 229
Msa0419860 MtrunA17_Chr3g0104061 33.272 541 316 16 22 545 23 535 1.10e-67 229
Msa0419860 MtrunA17_Chr7g0238941 30.449 601 334 20 7 561 16 578 1.15e-67 229
Msa0419860 MtrunA17_Chr5g0431581 31.373 561 328 18 9 541 4 535 7.23e-67 227
Msa0419860 MtrunA17_Chr3g0114211 30.835 587 334 23 2 554 12 560 7.43e-67 227
Msa0419860 MtrunA17_Chr2g0278811 32.646 582 322 24 12 544 25 585 1.10e-66 227
Msa0419860 MtrunA17_Chr4g0031901 33.031 551 299 22 25 540 44 559 1.65e-65 224
Msa0419860 MtrunA17_Chr7g0238981 30.660 561 338 14 21 553 43 580 1.89e-62 216
Msa0419860 MtrunA17_Chr8g0346581 30.216 556 312 20 25 544 34 549 4.63e-60 209
Msa0419860 MtrunA17_Chr7g0240991 29.066 578 339 21 7 544 3 549 1.54e-59 207
Msa0419860 MtrunA17_Chr8g0374271 28.007 557 335 16 25 565 31 537 8.92e-56 196
Msa0419860 MtrunA17_Chr4g0024861 28.366 557 328 17 25 562 27 531 2.18e-55 195
Msa0419860 MtrunA17_Chr7g0240971 28.098 573 324 23 18 544 18 548 3.08e-55 196
Msa0419860 MtrunA17_Chr4g0075071 28.242 563 327 18 25 565 31 538 2.84e-54 192
Msa0419860 MtrunA17_Chr4g0008521 28.546 557 331 16 24 544 25 550 5.21e-54 192
Msa0419860 MtrunA17_Chr3g0143671 27.692 585 342 22 6 565 9 537 1.11e-53 191
Msa0419860 MtrunA17_Chr4g0043251 26.976 582 361 20 1 562 1 538 2.68e-53 190
Msa0419860 MtrunA17_Chr8g0374261 27.341 534 316 18 48 562 52 532 5.15e-52 186
Msa0419860 MtrunA17_Chr5g0402831 28.674 558 321 20 25 562 31 531 6.87e-52 186
Msa0419860 MtrunA17_Chr3g0121151 28.007 582 340 23 7 562 49 577 1.52e-50 183
Msa0419860 MtrunA17_Chr3g0079321 26.958 549 341 16 37 562 41 552 2.15e-50 182
Msa0419860 MtrunA17_Chr1g0157341 26.863 577 345 20 11 562 9 533 4.06e-50 181
Msa0419860 MtrunA17_Chr4g0056511 27.837 564 337 18 27 562 29 550 5.16e-50 182
Msa0419860 MtrunA17_Chr3g0121161 27.778 576 349 21 7 562 49 577 5.88e-50 181
Msa0419860 MtrunA17_Chr2g0322441 27.305 564 325 19 25 562 30 534 1.08e-49 180
Msa0419860 MtrunA17_Chr3g0121171 28.366 557 333 20 26 562 27 537 3.74e-49 184
Msa0419860 MtrunA17_Chr3g0121171 27.778 576 349 21 7 562 584 1112 4.81e-49 183
Msa0419860 MtrunA17_Chr3g0121171 28.007 582 340 23 7 562 1159 1687 8.04e-48 180
Msa0419860 MtrunA17_Chr3g0121171 27.219 507 304 19 76 562 1792 2253 4.00e-43 166
Msa0419860 MtrunA17_Chr4g0038671 26.212 557 339 17 25 562 30 533 1.77e-48 176
Msa0419860 MtrunA17_Chr7g0234061 26.560 561 347 19 26 562 30 549 2.03e-46 172
Msa0419860 MtrunA17_Chr4g0043261 27.224 562 329 21 26 562 26 532 2.76e-45 167
Msa0419860 MtrunA17_Chr3g0118931 75.556 90 22 0 476 565 10 99 6.31e-45 154
Msa0419860 MtrunA17_Chr4g0024641 26.494 502 300 16 80 562 3 454 2.14e-37 148
Msa0419860 MtrunA17_Chr4g0005921 33.559 295 165 9 7 296 9 277 4.15e-37 145
Msa0419860 MtrunA17_Chr4g0005921 40.120 167 95 3 379 544 373 535 5.71e-29 121
Msa0419860 MtrunA17_Chr3g0133861 32.919 322 182 12 249 544 5 318 1.89e-32 127
Msa0419860 MtrunA17_Chr1g0197301 27.129 317 201 9 234 539 5 302 5.28e-27 112
Msa0419860 MtrunA17_Chr5g0436431 31.602 231 126 8 313 524 11 228 7.62e-21 91.7
Msa0419860 MtrunA17_Chr3g0133871 33.566 143 91 4 26 166 33 173 6.80e-18 82.8
Msa0419860 MtrunA17_Chr1g0197311 27.053 207 115 5 44 218 43 245 7.41e-15 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0419860 AT5G21105.1 66.786 560 182 2 9 564 19 578 0.0 800
Msa0419860 AT5G21100.1 63.587 552 193 5 17 564 16 563 0.0 738
Msa0419860 AT5G21105.3 65.720 528 177 2 1 524 11 538 0.0 737
Msa0419860 AT4G39830.1 48.866 573 270 9 7 564 16 580 0.0 572
Msa0419860 AT5G21105.2 67.109 377 123 1 189 564 11 387 0.0 549
Msa0419860 AT4G39830.2 49.084 491 229 8 87 564 3 485 2.22e-168 487
Msa0419860 AT4G39830.3 49.080 489 228 8 89 564 3 483 1.05e-167 485
Msa0419860 AT4G39830.4 47.047 491 226 9 87 564 3 472 4.95e-155 452
Msa0419860 AT5G05390.1 29.604 581 334 17 1 544 1 543 1.17e-70 237
Msa0419860 AT5G58910.2 32.310 554 305 20 24 544 29 545 7.27e-67 227
Msa0419860 AT5G03260.1 30.973 565 330 19 7 545 6 536 1.54e-66 226
Msa0419860 AT5G58910.3 32.491 554 303 21 24 544 29 544 7.42e-66 224
Msa0419860 AT5G07130.1 32.062 577 329 19 1 544 1 547 1.72e-65 224
Msa0419860 AT5G48100.1 31.459 569 314 22 14 544 11 541 2.61e-64 220
Msa0419860 AT2G30210.1 30.309 551 333 13 21 544 22 548 4.61e-64 220
Msa0419860 AT2G29130.1 32.689 569 327 20 1 540 6 547 5.55e-64 219
Msa0419860 AT2G40370.1 28.231 588 348 16 1 544 1 558 2.66e-63 218
Msa0419860 AT5G09360.1 30.729 576 327 19 1 544 12 547 5.12e-63 217
Msa0419860 AT2G46570.1 29.982 557 318 20 22 544 29 547 3.78e-62 214
Msa0419860 AT1G18140.1 30.159 567 323 17 20 544 24 559 1.65e-61 213
Msa0419860 AT5G01040.1 29.152 566 336 17 10 544 13 544 1.68e-61 213
Msa0419860 AT5G01050.1 29.174 569 334 18 10 544 13 546 2.71e-61 213
Msa0419860 AT2G38080.1 31.525 590 332 22 8 561 5 558 2.86e-61 212
Msa0419860 AT3G09220.1 29.381 565 335 18 12 544 13 545 3.12e-59 207
Msa0419860 AT1G55570.1 30.249 562 317 22 26 562 30 541 4.88e-58 203
Msa0419860 AT5G60020.1 30.329 577 337 19 1 540 3 551 5.34e-58 204
Msa0419860 AT5G01190.1 30.511 567 333 19 24 561 24 558 1.02e-57 202
Msa0419860 AT5G58910.1 31.227 538 293 21 40 544 8 501 5.01e-57 200
Msa0419860 AT5G01190.2 30.769 546 317 19 45 561 31 544 1.21e-55 196
Msa0419860 AT5G60020.3 30.483 538 311 17 40 540 8 519 1.13e-54 194
Msa0419860 AT4G22010.1 28.674 558 326 19 25 562 26 531 1.59e-53 191
Msa0419860 AT1G21860.1 27.972 572 337 17 16 565 16 534 1.90e-53 190
Msa0419860 AT3G13390.1 29.485 563 320 23 26 562 29 540 3.78e-53 190
Msa0419860 AT4G25240.2 29.472 587 346 22 4 563 7 552 8.51e-53 189
Msa0419860 AT4G25240.1 29.472 587 346 22 4 563 7 552 8.51e-53 189
Msa0419860 AT1G21850.1 27.682 578 350 18 4 562 3 531 1.24e-52 188
Msa0419860 AT4G12420.1 27.080 565 346 19 27 565 27 551 1.77e-52 189
Msa0419860 AT4G12420.2 27.080 565 346 19 27 565 27 551 1.77e-52 189
Msa0419860 AT5G51480.1 28.164 561 341 21 27 563 30 552 2.35e-52 188
Msa0419860 AT1G75790.1 27.243 602 335 21 4 562 1 542 3.54e-51 184
Msa0419860 AT5G60020.2 29.196 572 318 21 1 524 3 535 9.78e-51 183
Msa0419860 AT5G48450.2 25.907 579 361 17 9 562 8 543 2.83e-50 182
Msa0419860 AT5G48450.1 25.907 579 361 17 9 562 8 543 5.24e-50 182
Msa0419860 AT1G76160.1 26.235 587 351 19 5 565 4 534 7.33e-50 181
Msa0419860 AT5G66920.1 26.908 524 325 12 25 539 37 511 1.27e-49 180
Msa0419860 AT2G23630.2 26.944 553 336 16 27 562 37 538 3.46e-48 176
Msa0419860 AT2G46570.2 29.234 496 280 19 83 544 4 462 5.04e-48 174
Msa0419860 AT2G23630.1 26.944 553 336 16 27 562 32 533 5.43e-48 176
Msa0419860 AT5G07130.2 31.134 485 277 16 91 544 4 462 1.77e-47 173
Msa0419860 AT5G07130.3 31.134 485 277 16 91 544 4 462 1.77e-47 173
Msa0419860 AT4G28090.1 26.792 586 344 21 9 565 9 538 6.88e-47 172
Msa0419860 AT4G37160.1 25.859 553 343 16 27 562 33 535 6.91e-47 172
Msa0419860 AT1G41830.1 24.352 579 360 18 6 562 10 532 2.13e-46 171
Msa0419860 AT3G13400.2 26.523 558 342 22 26 562 28 538 6.30e-42 159
Msa0419860 AT3G13400.1 26.523 558 342 22 26 562 28 538 6.30e-42 159
Msa0419860 AT1G55560.1 26.354 554 346 19 27 562 28 537 4.40e-41 156
Msa0419860 AT3G09220.2 28.452 478 279 17 99 544 2 448 1.19e-40 154
Msa0419860 AT4G38420.1 24.735 566 349 18 25 565 30 543 5.81e-40 153
Msa0419860 AT4G37160.2 25.966 466 284 14 27 480 33 449 8.01e-36 140
Msa0419860 AT4G38420.3 24.405 504 309 16 25 508 30 481 7.83e-31 126
Msa0419860 AT4G38420.2 24.580 476 288 15 25 480 30 454 1.84e-29 121

Find 162 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATTAACTAGTCTCAATTT+TGG 0.160336 3_2:+68044698 None:intergenic
AAATCGGTAGTTTCACTAAA+TGG 0.163317 3_2:-68045284 Msa0419860:CDS
TATTTCTATCATGGACATTT+TGG 0.179942 3_2:-68049498 Msa0419860:CDS
CAAAATGCAAACCAGTTAAA+TGG 0.189861 3_2:-68045054 Msa0419860:CDS
CCGTTACCGGTAGTTGTATT+TGG 0.192418 3_2:+68045120 None:intergenic
TGCTCAGAGATTTAGTCTTT+TGG 0.198324 3_2:+68050261 None:intergenic
AAAACAAATCATTTCCAAAA+TGG 0.220018 3_2:-68045367 Msa0419860:CDS
TTGGACTGCATTAAGGTTTA+AGG 0.221108 3_2:-68044878 Msa0419860:CDS
TTGTCTTTCTTATCTTTCTA+AGG 0.225064 3_2:-68044639 Msa0419860:three_prime_UTR
CATATGGTTGGACTGCATTA+AGG 0.257525 3_2:-68044885 Msa0419860:CDS
TGTTCCCTAGCAGCTAAATA+TGG 0.261114 3_2:-68047625 Msa0419860:CDS
TGGCTGTGGAGTTCCCATTT+TGG 0.285078 3_2:+68045353 None:intergenic
GTAGTTGTATTTGGATTAAC+TGG 0.289880 3_2:+68045129 None:intergenic
TTTGTTTGGTGCATATGGTT+AGG 0.295869 3_2:-68050199 Msa0419860:CDS
AAACACTAATGGAAGATTAA+TGG 0.302516 3_2:+68044665 None:intergenic
CTTTCAAATTGCATTGTTGT+AGG 0.308083 3_2:+68047593 None:intergenic
AGGCAGATAACCCTGGTGTT+TGG 0.311229 3_2:-68044858 Msa0419860:CDS
CACTACCATTCCCATTTAAC+TGG 0.315490 3_2:+68045043 None:intergenic
GGCAGATAACCCTGGTGTTT+GGG 0.315629 3_2:-68044857 Msa0419860:CDS
TGGCTTTCAATTGGTGTTAG+AGG 0.316278 3_2:-68045519 Msa0419860:CDS
TTGGCTCCACATGAAGAATC+TGG 0.317779 3_2:+68047551 None:intergenic
AATGGCTCTCTTTGTTCCTT+TGG 0.323053 3_2:+68049429 None:intergenic
CATGTTTCTCATGTATAATT+AGG 0.333539 3_2:-68044570 Msa0419860:three_prime_UTR
CATTGAACCACATTTGCATA+TGG 0.333948 3_2:-68044821 Msa0419860:CDS
CTGAGGCTGTTCATAAAGTT+AGG 0.336809 3_2:-68044780 Msa0419860:CDS
GGAATCAATGGCCAGTTTCC+AGG 0.342868 3_2:-68050082 Msa0419860:CDS
TAGGGTCTTGGTCTGTTGTA+AGG 0.344364 3_2:+68045553 None:intergenic
CACCACCAGTCACACCCTTA+TGG 0.345496 3_2:-68045419 Msa0419860:CDS
GTTCACCAATCCATCTCATT+GGG 0.346982 3_2:+68049322 None:intergenic
TAATAGTTGGGCCTGGAAAC+TGG 0.350475 3_2:+68050071 None:intergenic
TAAATTTGCATGGATGTTAA+TGG 0.367515 3_2:-68044422 Msa0419860:three_prime_UTR
AAGCATTAATCAACGAATAA+AGG 0.369014 3_2:-68044448 Msa0419860:three_prime_UTR
TTGTTTGGTGCATATGGTTA+GGG 0.369163 3_2:-68050198 Msa0419860:CDS
AAACGTGTAAACACCGTTAC+CGG 0.380846 3_2:+68045107 None:intergenic
TTAACTTCAGCTTTAATAGT+TGG 0.382060 3_2:+68050058 None:intergenic
TAACTTCAGCTTTAATAGTT+GGG 0.385140 3_2:+68050059 None:intergenic
CCACACTTAAGAGCTTCTTT+AGG 0.398032 3_2:+68044751 None:intergenic
GAAGGATTGTATGTATATAT+AGG 0.401269 3_2:+68050313 None:intergenic
CTGTATTGAAAAGTTTCTCC+TGG 0.402941 3_2:+68049797 None:intergenic
TTTGCAGTTTGGAACTCCTT+GGG 0.403133 3_2:-68049858 Msa0419860:intron
ACAACATGCTCCACACAATC+TGG 0.411894 3_2:+68050109 None:intergenic
GTTAGGGCTTGTGGTGTGCC+TGG 0.412883 3_2:+68045489 None:intergenic
GTGTTCGGTATCGTTCCATA+AGG 0.413714 3_2:+68045404 None:intergenic
CTCAATACACAAAACAAAAT+CGG 0.415806 3_2:-68045300 Msa0419860:CDS
GTGACTGGTGGTGGTAATGT+TGG 0.417838 3_2:+68045429 None:intergenic
AAACAAATCATTTCCAAAAT+GGG 0.418944 3_2:-68045366 Msa0419860:CDS
TCTAAGGTATCATCACTTCA+TGG 0.419599 3_2:-68044623 Msa0419860:three_prime_UTR
TTTGGAACTCCTTGGGCTGA+TGG 0.420214 3_2:-68049851 Msa0419860:CDS
ACTGCAGTTATATTTCCATA+TGG 0.422579 3_2:-68044901 Msa0419860:CDS
AATACAGATTCAAAGTTGAC+AGG 0.425137 3_2:-68049781 Msa0419860:CDS
ATTTGACACGTGCACCTTTG+AGG 0.429330 3_2:-68044927 Msa0419860:CDS
AACTCACCATCATAATGAAA+TGG 0.432896 3_2:+68049411 None:intergenic
CTTAATGCAGTCCAACCATA+TGG 0.434255 3_2:+68044886 None:intergenic
GGTTCACCAATCCATCTCAT+TGG 0.437708 3_2:+68049321 None:intergenic
AATTTGATTGATCCTAAGTA+AGG 0.437892 3_2:+68045225 None:intergenic
AATCGGTAGTTTCACTAAAT+GGG 0.438520 3_2:-68045283 Msa0419860:CDS
TGTGAATGCTTTGCTGTGTT+CGG 0.443250 3_2:+68045389 None:intergenic
GTTTGCAGTTTGGAACTCCT+TGG 0.444823 3_2:-68049859 Msa0419860:intron
TTAAGGATTGTTAGGGCTTG+TGG 0.446548 3_2:+68045480 None:intergenic
AAAATGCAAACCAGTTAAAT+GGG 0.447011 3_2:-68045053 Msa0419860:CDS
GAATAACAGTTCCCTCTGTA+TGG 0.447128 3_2:+68050002 None:intergenic
CAAAGAGCAGCAGGGCTGTA+TGG 0.448009 3_2:-68049471 Msa0419860:CDS
CAGTTATATTTCCATATGGT+TGG 0.450338 3_2:-68044897 Msa0419860:CDS
ATACTATTCACGCGGGGAGT+TGG 0.451050 3_2:+68044539 None:intergenic
AGAGAGCCATTTCATTATGA+TGG 0.456007 3_2:-68049417 Msa0419860:CDS
GATGTCATTTAGGAATATCT+AGG 0.458902 3_2:+68044720 None:intergenic
TAGGAGAAAACTCACTGAAA+TGG 0.458974 3_2:+68047471 None:intergenic
TTGCCAACCACACCTTACTT+AGG 0.459014 3_2:-68045237 Msa0419860:CDS
CAAATTGCATTGTTGTAGGT+TGG 0.462781 3_2:+68047597 None:intergenic
TGGCTCCACATGAAGAATCT+GGG 0.463007 3_2:+68047552 None:intergenic
TTAAATATGTCATAATCCAT+TGG 0.467428 3_2:+68045156 None:intergenic
ATTGAACCACATTTGCATAT+GGG 0.467926 3_2:-68044820 Msa0419860:CDS
TTTGTAGTTAAGGATTGTTA+GGG 0.470399 3_2:+68045473 None:intergenic
TTTGGTATGCAAAGAGCAGC+AGG 0.470698 3_2:-68049480 Msa0419860:CDS
CCTGGTACATATTTCTATCA+TGG 0.478578 3_2:-68049507 Msa0419860:CDS
TAATCCATTGGAAATCTCTC+TGG 0.486255 3_2:+68045168 None:intergenic
GTTCCCTAGCAGCTAAATAT+GGG 0.491107 3_2:-68047624 Msa0419860:CDS
CAATGGAATGCCCAAACACC+AGG 0.492231 3_2:+68044847 None:intergenic
CCCCGCGTGAATAGTATGTA+GGG 0.496003 3_2:-68044533 Msa0419860:three_prime_UTR
TCAGCTTTAATAGTTGGGCC+TGG 0.499380 3_2:+68050064 None:intergenic
TGTGAGGATTTCGGTGGCTG+TGG 0.503552 3_2:+68045339 None:intergenic
GTCCTTGGCTTCTCTCAACT+TGG 0.506872 3_2:-68047494 Msa0419860:CDS
TGTTCGGTATCGTTCCATAA+GGG 0.510120 3_2:+68045405 None:intergenic
GATTGCTAGTACTACGTCCT+TGG 0.510808 3_2:-68047509 Msa0419860:CDS
TCTATAAATGAAATGAAAGA+AGG 0.511625 3_2:+68050295 None:intergenic
TCAGAATCACAAACTTATTG+TGG 0.512257 3_2:-68045655 Msa0419860:intron
CATAAGGGTGTGACTGGTGG+TGG 0.513495 3_2:+68045420 None:intergenic
ATCGTGCGGTGTGAGGATTT+CGG 0.515283 3_2:+68045330 None:intergenic
TCAGCCCCAATGAGATGGAT+TGG 0.516747 3_2:-68049327 Msa0419860:CDS
GCTGTATGGTTCTCTAATAG+TGG 0.517469 3_2:-68049457 Msa0419860:CDS
ACCACATTTGCATATGGGAA+TGG 0.518745 3_2:-68044815 Msa0419860:CDS
ATTGGAAATCTCTCTGGTGG+TGG 0.520673 3_2:+68045174 None:intergenic
CTTATTGTGGTGGAAGCAGA+TGG 0.523378 3_2:-68045642 Msa0419860:CDS
ATCTGCTCCTTAGTGATCTG+TGG 0.529687 3_2:-68049386 Msa0419860:CDS
CCAAATACAACTACCGGTAA+CGG 0.532128 3_2:-68045120 Msa0419860:CDS
TCTCTTCAGCCCCAATGAGA+TGG 0.532184 3_2:-68049332 Msa0419860:CDS
CAGAGGGAACTGTTATTCAC+TGG 0.535040 3_2:-68049997 Msa0419860:CDS
GTTAATCCAAATACAACTAC+CGG 0.535206 3_2:-68045126 Msa0419860:CDS
TGCTCCCATATTTAGCTGCT+AGG 0.538328 3_2:+68047620 None:intergenic
TCACTGGCATGGAATTAGAC+AGG 0.538628 3_2:-68049981 Msa0419860:intron
TCTCAGTGTGCTATAAATCC+AGG 0.546219 3_2:-68049815 Msa0419860:CDS
TCGTTCCATAAGGGTGTGAC+TGG 0.548390 3_2:+68045414 None:intergenic
GCAAACCAGTTAAATGGGAA+TGG 0.548393 3_2:-68045048 Msa0419860:CDS
GCTCCCATATTTAGCTGCTA+GGG 0.548844 3_2:+68047621 None:intergenic
CCACATTTGCATATGGGAAT+GGG 0.550546 3_2:-68044814 Msa0419860:CDS
ACTAGCAATCCTTATTCTGT+AGG 0.552909 3_2:+68047522 None:intergenic
CCCATTCCCATATGCAAATG+TGG 0.553246 3_2:+68044814 None:intergenic
GGTGTTAGAGGCAGAAAACC+AGG 0.555537 3_2:-68045507 Msa0419860:CDS
ATTCATCCATGGCATTTGCA+TGG 0.556495 3_2:-68045018 Msa0419860:CDS
CATGTTGTGATGGGAATCAA+TGG 0.556686 3_2:-68050094 Msa0419860:CDS
CTACAACAATGCAATTTGAA+AGG 0.558037 3_2:-68047592 Msa0419860:CDS
TGTTGTAAGGAGTACTGAGT+AGG 0.563668 3_2:+68045566 None:intergenic
GGAACTGTTATTCACTGGCA+TGG 0.565221 3_2:-68049992 Msa0419860:CDS
CCATGATAGAAATATGTACC+AGG 0.570980 3_2:+68049507 None:intergenic
CGATGTCATCAACTGCGAAT+GGG 0.572651 3_2:+68045607 None:intergenic
TTGTGTGGAGCATGTTGTGA+TGG 0.577399 3_2:-68050104 Msa0419860:CDS
GATCCTAAGTAAGGTGTGGT+TGG 0.579576 3_2:+68045234 None:intergenic
GAATCACAAACTTATTGTGG+TGG 0.579698 3_2:-68045652 Msa0419860:CDS
GGCCAAGTTGAGAGAAGCCA+AGG 0.580752 3_2:+68047492 None:intergenic
ATCTCATTGGGGCTGAAGAG+AGG 0.581211 3_2:+68049334 None:intergenic
ACCACCAGAGAGATTTCCAA+TGG 0.581481 3_2:-68045172 Msa0419860:CDS
TCTAATAGTGGATTTACCAA+AGG 0.582956 3_2:-68049445 Msa0419860:CDS
GAGATGGATTGGTGAACCAC+AGG 0.584866 3_2:-68049316 Msa0419860:intron
TCCCCGCGTGAATAGTATGT+AGG 0.585500 3_2:-68044534 Msa0419860:three_prime_UTR
TCGATGTCATCAACTGCGAA+TGG 0.586686 3_2:+68045606 None:intergenic
ATAACTGCAGTGTTCCTCAA+AGG 0.587942 3_2:+68044913 None:intergenic
ACTAATGGAAGATTAATGGT+TGG 0.587978 3_2:+68044669 None:intergenic
ATAAAGGTGATAAATTTGCA+TGG 0.590600 3_2:-68044432 Msa0419860:three_prime_UTR
CACAAGCTCACATGAACAAG+AGG 0.595059 3_2:-68049361 Msa0419860:CDS
CTGTATGGAGCTTGTTCGTG+AGG 0.597737 3_2:+68050017 None:intergenic
TTACACGTTTCAGTTGAATG+AGG 0.598282 3_2:-68045094 Msa0419860:CDS
GAGGAGAATCGTGCGGTGTG+AGG 0.599110 3_2:+68045323 None:intergenic
TGTGTGGAGCATGTTGTGAT+GGG 0.602225 3_2:-68050103 Msa0419860:CDS
TGCACCCCAGATTCTTCATG+TGG 0.602253 3_2:-68047557 Msa0419860:CDS
GGCTCCACATGAAGAATCTG+GGG 0.602686 3_2:+68047553 None:intergenic
AGGTTTAAGGCAGATAACCC+TGG 0.609626 3_2:-68044865 Msa0419860:CDS
CAACAATGCAATTTGAAAGG+TGG 0.612313 3_2:-68047589 Msa0419860:CDS
TCATGTCCATGCAAATGCCA+TGG 0.613062 3_2:+68045012 None:intergenic
GATGACATCGACATCTACTC+AGG 0.614053 3_2:-68045594 Msa0419860:CDS
ATACAGATTCAAAGTTGACA+GGG 0.614232 3_2:-68049780 Msa0419860:intron
TTGTGTGCCACAGATCACTA+AGG 0.616013 3_2:+68049379 None:intergenic
AGCTCACATGAACAAGAGGT+TGG 0.616753 3_2:-68049357 Msa0419860:CDS
AGCTTGCTCATCAATGGACG+AGG 0.623207 3_2:-68047658 Msa0419860:CDS
TTCCATAAGGGTGTGACTGG+TGG 0.624649 3_2:+68045417 None:intergenic
TCCATTGGAAATCTCTCTGG+TGG 0.626333 3_2:+68045171 None:intergenic
CCTAAAGAAGCTCTTAAGTG+TGG 0.626917 3_2:-68044751 Msa0419860:CDS
ATGGTAGTGAAATTCATCCA+TGG 0.631220 3_2:-68045029 Msa0419860:CDS
CCCCTACATACTATTCACGC+GGG 0.638161 3_2:+68044532 None:intergenic
TTCACCAATCCATCTCATTG+GGG 0.642456 3_2:+68049323 None:intergenic
GCAGCAGTTCCATCAGCCCA+AGG 0.643166 3_2:+68049842 None:intergenic
ACGAACAAGCTCCATACAGA+GGG 0.648620 3_2:-68050013 Msa0419860:CDS
CACGAACAAGCTCCATACAG+AGG 0.651295 3_2:-68050014 Msa0419860:CDS
CCGCGTGAATAGTATGTAGG+GGG 0.654165 3_2:-68044531 Msa0419860:three_prime_UTR
TTGGTATGCAAAGAGCAGCA+GGG 0.660158 3_2:-68049479 Msa0419860:CDS
CCCGCGTGAATAGTATGTAG+GGG 0.662901 3_2:-68044532 Msa0419860:three_prime_UTR
AATGTGGTTCAATGTGACAA+TGG 0.664380 3_2:+68044830 None:intergenic
GATTGATCCTAAGTAAGGTG+TGG 0.679397 3_2:+68045230 None:intergenic
GTGCGGTGTGAGGATTTCGG+TGG 0.702906 3_2:+68045333 None:intergenic
AATGGAATGCCCAAACACCA+GGG 0.708938 3_2:+68044848 None:intergenic
GGTGAAGGGAGATTTAGACC+AGG 0.724991 3_2:-68044970 Msa0419860:CDS
CCCTACATACTATTCACGCG+GGG 0.729879 3_2:+68044533 None:intergenic
TATTGAGGAGGAGAATCGTG+CGG 0.763434 3_2:+68045316 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATATATATATAATATTAAC+TGG - chr3_2:68045153-68045172 Msa0419860:CDS 10.0%
!!! AAATTTTTCTACTTTTTTTT+TGG - chr3_2:68046621-68046640 Msa0419860:intron 10.0%
!! GATATTTAAAAAAGAATAAA+TGG + chr3_2:68047846-68047865 None:intergenic 10.0%
!! GTTAAAAATCATTATTAATA+TGG - chr3_2:68048123-68048142 Msa0419860:intron 10.0%
!!! TTTATAGAATTATTTTTTGT+TGG + chr3_2:68048218-68048237 None:intergenic 10.0%
!!! GTTTTATTAAAAATGTTATT+TGG + chr3_2:68048821-68048840 None:intergenic 10.0%
!! ATATTTAATTATAACTAGAC+TGG + chr3_2:68044790-68044809 None:intergenic 15.0%
!! TATATAATATAATTAGAGCT+AGG - chr3_2:68045128-68045147 Msa0419860:CDS 15.0%
!! TATATATAATATTAACTGGT+TGG - chr3_2:68045157-68045176 Msa0419860:CDS 15.0%
!!! TTTTAAAGCATAATAACTTT+TGG - chr3_2:68045867-68045886 Msa0419860:intron 15.0%
!!! TTTAATAAAAGTACCTATTA+AGG - chr3_2:68046074-68046093 Msa0419860:intron 15.0%
!! GTTTAATATATAAAGATAGT+GGG + chr3_2:68046161-68046180 None:intergenic 15.0%
!! TGTTTAATATATAAAGATAG+TGG + chr3_2:68046162-68046181 None:intergenic 15.0%
!!! TTTTATTACTTTTTTAAACG+TGG - chr3_2:68046274-68046293 Msa0419860:intron 15.0%
!! TTCTTAAAAAAAATATGAAC+TGG - chr3_2:68046595-68046614 Msa0419860:intron 15.0%
!! TTGTCTTGATTAAAATTTAA+AGG + chr3_2:68046745-68046764 None:intergenic 15.0%
!!! AGTATTATTTTTCATTCTTT+TGG - chr3_2:68046863-68046882 Msa0419860:intron 15.0%
!! ACTATATTATCATTCATAAA+AGG + chr3_2:68047005-68047024 None:intergenic 15.0%
!!! TATTTTGCATATCATTATTA+GGG - chr3_2:68047371-68047390 Msa0419860:intron 15.0%
!!! TTGAAAAAATGTTTTAGATA+TGG - chr3_2:68047682-68047701 Msa0419860:intron 15.0%
!!! AAAAAAACTTTAACTTCAAT+AGG - chr3_2:68047816-68047835 Msa0419860:intron 15.0%
!!! AAATATCATTTTTTTTTTGG+TGG - chr3_2:68047859-68047878 Msa0419860:intron 15.0%
!! TGTTCAATTAATTGTTATAT+TGG - chr3_2:68048037-68048056 Msa0419860:intron 15.0%
!! TCTATAAATGAAATGAAAGA+AGG + chr3_2:68044412-68044431 None:intergenic 20.0%
!!! CATATTTAAGTACTTTTCAT+TGG + chr3_2:68046137-68046156 None:intergenic 20.0%
!!! TATTACTCATTTTTACAAGT+GGG - chr3_2:68046195-68046214 Msa0419860:intron 20.0%
!! AAAAAAAAAATTGACAAGTG+GGG + chr3_2:68046534-68046553 None:intergenic 20.0%
!! GAAAAAAAAAATTGACAAGT+GGG + chr3_2:68046535-68046554 None:intergenic 20.0%
!! TGAAAAAAAAAATTGACAAG+TGG + chr3_2:68046536-68046555 None:intergenic 20.0%
!! AATTGTAAGTTAATATGAAC+TGG - chr3_2:68046694-68046713 Msa0419860:intron 20.0%
!! ACATATATCATATATGTAGT+GGG + chr3_2:68047266-68047285 None:intergenic 20.0%
!! AACATATATCATATATGTAG+TGG + chr3_2:68047267-68047286 None:intergenic 20.0%
!!! CTATTTTGCATATCATTATT+AGG - chr3_2:68047370-68047389 Msa0419860:intron 20.0%
!!! CAATTGATTCCTTTTTTATT+TGG + chr3_2:68047503-68047522 None:intergenic 20.0%
!! GAAAACGAATGAAATAATTT+AGG - chr3_2:68047586-68047605 Msa0419860:CDS 20.0%
!! ATCGTAGGAATTAAAAATTA+AGG - chr3_2:68047754-68047773 Msa0419860:intron 20.0%
!! TCAATTAATTGTTATATTGG+AGG - chr3_2:68048040-68048059 Msa0419860:intron 20.0%
!! CAATTAATTGTTATATTGGA+GGG - chr3_2:68048041-68048060 Msa0419860:intron 20.0%
!! AATTAATTGTTATATTGGAG+GGG - chr3_2:68048042-68048061 Msa0419860:intron 20.0%
!! ATACATTCAAATAAATGAAG+CGG - chr3_2:68048190-68048209 Msa0419860:intron 20.0%
!! TTCATCATTATCACATTTAA+AGG + chr3_2:68048265-68048284 None:intergenic 20.0%
!!! TTAAATGTGATAATGATGAA+CGG - chr3_2:68048265-68048284 Msa0419860:intron 20.0%
!! CGAATTAAATATTGTTTCAT+TGG - chr3_2:68048610-68048629 Msa0419860:intron 20.0%
!! TTAAATATTGTTTCATTGGT+TGG - chr3_2:68048614-68048633 Msa0419860:intron 20.0%
!! AACTTCACGTTAAATTATTT+AGG - chr3_2:68048653-68048672 Msa0419860:intron 20.0%
!! GAAAAGTTGAATTTAAATCT+TGG - chr3_2:68048675-68048694 Msa0419860:intron 20.0%
!!! CATTTAGATTTAGAATATCT+TGG + chr3_2:68048878-68048897 None:intergenic 20.0%
!! TGAAATAATGAATCAATCTA+TGG + chr3_2:68048996-68049015 None:intergenic 20.0%
!! AAAACAAATCATTTCCAAAA+TGG - chr3_2:68049337-68049356 Msa0419860:CDS 20.0%
!! AAACAAATCATTTCCAAAAT+GGG - chr3_2:68049338-68049357 Msa0419860:CDS 20.0%
!! TTAAATATGTCATAATCCAT+TGG + chr3_2:68049551-68049570 None:intergenic 20.0%
!!! TAATTAACTAGTCTCAATTT+TGG + chr3_2:68050009-68050028 None:intergenic 20.0%
!! AAAGACAAAAAAAACACTAA+TGG + chr3_2:68050053-68050072 None:intergenic 20.0%
! GAAGGATTGTATGTATATAT+AGG + chr3_2:68044394-68044413 None:intergenic 25.0%
!! TAACTTCAGCTTTAATAGTT+GGG + chr3_2:68044648-68044667 None:intergenic 25.0%
!! TTAACTTCAGCTTTAATAGT+TGG + chr3_2:68044649-68044668 None:intergenic 25.0%
!!! TATTTCTATCATGGACATTT+TGG - chr3_2:68045206-68045225 Msa0419860:CDS 25.0%
! AGTGTAAAAGTTTCTTTACA+AGG + chr3_2:68045592-68045611 None:intergenic 25.0%
!!! AGTTTTAAAGTTGTCATGAT+CGG - chr3_2:68045709-68045728 Msa0419860:intron 25.0%
!!! ACAAAATAAAGGAGTATCAT+TGG + chr3_2:68045970-68045989 None:intergenic 25.0%
!!! CTATTACTCATTTTTACAAG+TGG - chr3_2:68046194-68046213 Msa0419860:intron 25.0%
! GTAATAAAATGTGTACTACT+TGG + chr3_2:68046222-68046241 None:intergenic 25.0%
! TTATTACTTCTTTATGCAAG+TGG - chr3_2:68046235-68046254 Msa0419860:intron 25.0%
! TATTACTTCTTTATGCAAGT+GGG - chr3_2:68046236-68046255 Msa0419860:intron 25.0%
! GTAATAAAATGTGTACTACT+TGG + chr3_2:68046222-68046241 None:intergenic 25.0%
!! TCGTTGGAATTTTTCTATAA+TGG - chr3_2:68046488-68046507 Msa0419860:intron 25.0%
! AAAAAAAAATTGACAAGTGG+GGG + chr3_2:68046533-68046552 None:intergenic 25.0%
! AAGACAATAGAAATATGAAC+TGG - chr3_2:68046570-68046589 Msa0419860:intron 25.0%
! TACTATTCCATTATCTTTCT+TGG + chr3_2:68046847-68046866 None:intergenic 25.0%
!! TCTTTTGGTAAATGTACAAT+TGG - chr3_2:68046878-68046897 Msa0419860:intron 25.0%
! AATTGAGATGAGCATATATT+TGG + chr3_2:68047420-68047439 None:intergenic 25.0%
!!! TGATTCCTTTTTTATTTGGT+GGG + chr3_2:68047499-68047518 None:intergenic 25.0%
!!! TTGATTCCTTTTTTATTTGG+TGG + chr3_2:68047500-68047519 None:intergenic 25.0%
! AATCAATTGTCGACATAATA+AGG - chr3_2:68047514-68047533 Msa0419860:CDS 25.0%
!!! TTACTTTTAAGAGGAAATTC+CGG - chr3_2:68047542-68047561 Msa0419860:CDS 25.0%
! TGAATTAGACTATTAATCTC+CGG + chr3_2:68047564-68047583 None:intergenic 25.0%
! GAGATTAATAGTCTAATTCA+TGG - chr3_2:68047564-68047583 Msa0419860:CDS 25.0%
! GTAAGAAAAACTTCACTAAT+AGG - chr3_2:68047635-68047654 Msa0419860:CDS 25.0%
! TGCATAATATATACAAGGTT+CGG + chr3_2:68047898-68047917 None:intergenic 25.0%
! GACAATGCATAATATATACA+AGG + chr3_2:68047903-68047922 None:intergenic 25.0%
! ATAAAGCCAAATGTTAGTAT+AGG - chr3_2:68048011-68048030 Msa0419860:intron 25.0%
! ATTAATTGTTATATTGGAGG+GGG - chr3_2:68048043-68048062 Msa0419860:intron 25.0%
!!! TCTTTTCCTTATTTTATACG+AGG + chr3_2:68048393-68048412 None:intergenic 25.0%
! AGTTGAATTTAAATCTTGGT+TGG - chr3_2:68048679-68048698 Msa0419860:intron 25.0%
! TGAAACAAACAGAAATTATG+GGG + chr3_2:68049032-68049051 None:intergenic 25.0%
! CTGAAACAAACAGAAATTAT+GGG + chr3_2:68049033-68049052 None:intergenic 25.0%
!! TCTGAAACAAACAGAAATTA+TGG + chr3_2:68049034-68049053 None:intergenic 25.0%
!!! AAAGCCAGTAGTTTTTTTTA+GGG + chr3_2:68049172-68049191 None:intergenic 25.0%
! TTTGTAGTTAAGGATTGTTA+GGG + chr3_2:68049234-68049253 None:intergenic 25.0%
!! TTTTGTAGTTAAGGATTGTT+AGG + chr3_2:68049235-68049254 None:intergenic 25.0%
! CTCAATACACAAAACAAAAT+CGG - chr3_2:68049404-68049423 Msa0419860:CDS 25.0%
! AATTTGATTGATCCTAAGTA+AGG + chr3_2:68049482-68049501 None:intergenic 25.0%
! AAAATGCAAACCAGTTAAAT+GGG - chr3_2:68049651-68049670 Msa0419860:intron 25.0%
! AAACACTAATGGAAGATTAA+TGG + chr3_2:68050042-68050061 None:intergenic 25.0%
! TTGTCTTTCTTATCTTTCTA+AGG - chr3_2:68050065-68050084 Msa0419860:CDS 25.0%
! CATGTTTCTCATGTATAATT+AGG - chr3_2:68050134-68050153 Msa0419860:CDS 25.0%
! AAGCATTAATCAACGAATAA+AGG - chr3_2:68050256-68050275 Msa0419860:five_prime_UTR 25.0%
! ATAAAGGTGATAAATTTGCA+TGG - chr3_2:68050272-68050291 Msa0419860:five_prime_UTR 25.0%
! TAAATTTGCATGGATGTTAA+TGG - chr3_2:68050282-68050301 Msa0419860:five_prime_UTR 25.0%
!! AGGTAAATTCTTAGTTCTAG+TGG - chr3_2:68044743-68044762 Msa0419860:CDS 30.0%
TTATAACTAGACTGGTACTT+TGG + chr3_2:68044782-68044801 None:intergenic 30.0%
CTGTAAAAATGTTTGCAGTT+TGG - chr3_2:68044835-68044854 Msa0419860:CDS 30.0%
AATACAGATTCAAAGTTGAC+AGG - chr3_2:68044923-68044942 Msa0419860:CDS 30.0%
ATACAGATTCAAAGTTGACA+GGG - chr3_2:68044924-68044943 Msa0419860:CDS 30.0%
AATTAATCAACATGTAGCAG+TGG + chr3_2:68045010-68045029 None:intergenic 30.0%
AACAAAAGAAAAACCATTGC+TGG + chr3_2:68045072-68045091 None:intergenic 30.0%
!! TAACTGGTTGGTGTTAAATA+TGG - chr3_2:68045169-68045188 Msa0419860:CDS 30.0%
!! TCTAATAGTGGATTTACCAA+AGG - chr3_2:68045259-68045278 Msa0419860:CDS 30.0%
AACTCACCATCATAATGAAA+TGG + chr3_2:68045296-68045315 None:intergenic 30.0%
CAACGATGATTTGATGAAAT+GGG + chr3_2:68046474-68046493 None:intergenic 30.0%
!!! AGCTTTATTTTGACGCAAAA+AGG - chr3_2:68046913-68046932 Msa0419860:intron 30.0%
!!! GCTTTATTTTGACGCAAAAA+GGG - chr3_2:68046914-68046933 Msa0419860:intron 30.0%
CTTTCAAATTGCATTGTTGT+AGG + chr3_2:68047114-68047133 None:intergenic 30.0%
CTACAACAATGCAATTTGAA+AGG - chr3_2:68047112-68047131 Msa0419860:intron 30.0%
!!! CTTATTCTGTAGGTCTTTTT+TGG + chr3_2:68047175-68047194 None:intergenic 30.0%
CAAAAAAGACCTACAGAATA+AGG - chr3_2:68047173-68047192 Msa0419860:intron 30.0%
ATAGACACACACAAACTAAT+TGG + chr3_2:68047354-68047373 None:intergenic 30.0%
CATCTCAATTATCACCATTT+AGG - chr3_2:68047430-68047449 Msa0419860:intron 30.0%
!!! TTTTTTATTTGGTGGGAACA+AGG + chr3_2:68047492-68047511 None:intergenic 30.0%
TTGTTCCCACCAAATAAAAA+AGG - chr3_2:68047491-68047510 Msa0419860:CDS 30.0%
AATTGTCGACATAATAAGGA+AGG - chr3_2:68047518-68047537 Msa0419860:CDS 30.0%
!! AAGGAAGGTTTACTTTTAAG+AGG - chr3_2:68047533-68047552 Msa0419860:CDS 30.0%
TGAAATAATTTAGGAACCGT+AGG - chr3_2:68047595-68047614 Msa0419860:CDS 30.0%
GCATAATATATACAAGGTTC+GGG + chr3_2:68047897-68047916 None:intergenic 30.0%
ACATCTCCTATACTAACATT+TGG + chr3_2:68048020-68048039 None:intergenic 30.0%
! AATTGTCGCATCAATTGTTT+TGG - chr3_2:68048101-68048120 Msa0419860:intron 30.0%
!!! GCAATTCTGATTGTTTTGAT+TGG - chr3_2:68048145-68048164 Msa0419860:intron 30.0%
TGCCAAATTTATGTCTATAG+AGG - chr3_2:68048485-68048504 Msa0419860:intron 30.0%
GCCAAATTTATGTCTATAGA+GGG - chr3_2:68048486-68048505 Msa0419860:intron 30.0%
TCCCTCTATAGACATAAATT+TGG + chr3_2:68048490-68048509 None:intergenic 30.0%
CATGCATGTATGATAAAATG+GGG + chr3_2:68048538-68048557 None:intergenic 30.0%
GCATGCATGTATGATAAAAT+GGG + chr3_2:68048539-68048558 None:intergenic 30.0%
TGCATGCATGTATGATAAAA+TGG + chr3_2:68048540-68048559 None:intergenic 30.0%
ACAATCTGACTATCCAATTA+TGG - chr3_2:68048718-68048737 Msa0419860:intron 30.0%
CAATCTGACTATCCAATTAT+GGG - chr3_2:68048719-68048738 Msa0419860:intron 30.0%
AATCTGACTATCCAATTATG+GGG - chr3_2:68048720-68048739 Msa0419860:intron 30.0%
AATCTAAATGCATGATGCTT+TGG - chr3_2:68048888-68048907 Msa0419860:intron 30.0%
ATCTAAATGCATGATGCTTT+GGG - chr3_2:68048889-68048908 Msa0419860:intron 30.0%
TGCAATTCAAGGAATGATAT+GGG + chr3_2:68048973-68048992 None:intergenic 30.0%
TCAGAATCACAAACTTATTG+TGG - chr3_2:68049049-68049068 Msa0419860:intron 30.0%
!!! AGTAGTTTTTTTTAGGGTCT+TGG + chr3_2:68049166-68049185 None:intergenic 30.0%
AAGACCCTAAAAAAAACTAC+TGG - chr3_2:68049165-68049184 Msa0419860:intron 30.0%
!!! GAAAGCCAGTAGTTTTTTTT+AGG + chr3_2:68049173-68049192 None:intergenic 30.0%
!! AAAAACTACTGGCTTTCAAT+TGG - chr3_2:68049176-68049195 Msa0419860:intron 30.0%
!! CAGAGATTGTTTTGTAGTTA+AGG + chr3_2:68049244-68049263 None:intergenic 30.0%
!!! TTTTGTTTTGTGTATTGAGG+AGG + chr3_2:68049403-68049422 None:intergenic 30.0%
!!! CGATTTTGTTTTGTGTATTG+AGG + chr3_2:68049406-68049425 None:intergenic 30.0%
AAATCGGTAGTTTCACTAAA+TGG - chr3_2:68049420-68049439 Msa0419860:CDS 30.0%
AATCGGTAGTTTCACTAAAT+GGG - chr3_2:68049421-68049440 Msa0419860:CDS 30.0%
GTAGTTGTATTTGGATTAAC+TGG + chr3_2:68049578-68049597 None:intergenic 30.0%
GTTAATCCAAATACAACTAC+CGG - chr3_2:68049578-68049597 Msa0419860:intron 30.0%
CAAAATGCAAACCAGTTAAA+TGG - chr3_2:68049650-68049669 Msa0419860:intron 30.0%
! ATTTGCATGGACATGATTTT+TGG - chr3_2:68049699-68049718 Msa0419860:intron 30.0%
! TTTGCATGGACATGATTTTT+GGG - chr3_2:68049700-68049719 Msa0419860:intron 30.0%
ACTGCAGTTATATTTCCATA+TGG - chr3_2:68049803-68049822 Msa0419860:CDS 30.0%
CAGTTATATTTCCATATGGT+TGG - chr3_2:68049807-68049826 Msa0419860:CDS 30.0%
ATTGAACCACATTTGCATAT+GGG - chr3_2:68049884-68049903 Msa0419860:intron 30.0%
! GATGTCATTTAGGAATATCT+AGG + chr3_2:68049987-68050006 None:intergenic 30.0%
!! CTCAATTTTGGATGTCATTT+AGG + chr3_2:68049997-68050016 None:intergenic 30.0%
ACTAATGGAAGATTAATGGT+TGG + chr3_2:68050038-68050057 None:intergenic 30.0%
!! GCTCAGAGATTTAGTCTTTT+GGG + chr3_2:68044445-68044464 None:intergenic 35.0%
!! TGCTCAGAGATTTAGTCTTT+TGG + chr3_2:68044446-68044465 None:intergenic 35.0%
! TGCTGAAAGCAGTTTTTGTT+TGG - chr3_2:68044491-68044510 Msa0419860:three_prime_UTR 35.0%
!!! CAGTTTTTGTTTGGTGCATA+TGG - chr3_2:68044500-68044519 Msa0419860:three_prime_UTR 35.0%
!! TTTGTTTGGTGCATATGGTT+AGG - chr3_2:68044505-68044524 Msa0419860:three_prime_UTR 35.0%
!! TTGTTTGGTGCATATGGTTA+GGG - chr3_2:68044506-68044525 Msa0419860:three_prime_UTR 35.0%
ATACAAAAAGCCAGATTGTG+TGG - chr3_2:68044585-68044604 Msa0419860:three_prime_UTR 35.0%
CTGTATTGAAAAGTTTCTCC+TGG + chr3_2:68044910-68044929 None:intergenic 35.0%
CCATGATAGAAATATGTACC+AGG + chr3_2:68045200-68045219 None:intergenic 35.0%
! CCTGGTACATATTTCTATCA+TGG - chr3_2:68045197-68045216 Msa0419860:CDS 35.0%
AGAGAGCCATTTCATTATGA+TGG - chr3_2:68045287-68045306 Msa0419860:CDS 35.0%
! TGGTGGATGTCACAAAATAA+AGG + chr3_2:68045981-68046000 None:intergenic 35.0%
AAATAAGTGATGTGTCACGT+GGG + chr3_2:68046047-68046066 None:intergenic 35.0%
TAAATAAGTGATGTGTCACG+TGG + chr3_2:68046048-68046067 None:intergenic 35.0%
CCTTGTTAGTGTATTGTCAT+TGG + chr3_2:68046111-68046130 None:intergenic 35.0%
CCAATGACAATACACTAACA+AGG - chr3_2:68046108-68046127 Msa0419860:intron 35.0%
AAAGAACGGGCAACTATATA+AGG + chr3_2:68046330-68046349 None:intergenic 35.0%
TATAGTTGCCCGTTCTTTAA+CGG - chr3_2:68046332-68046351 Msa0419860:intron 35.0%
! CTCAATTTTTCTTCCTCCAA+TGG - chr3_2:68046358-68046377 Msa0419860:intron 35.0%
! AATTTTTCTTCCTCCAATGG+AGG - chr3_2:68046361-68046380 Msa0419860:intron 35.0%
! ATTTTTCTTCCTCCAATGGA+GGG - chr3_2:68046362-68046381 Msa0419860:intron 35.0%
! TATTAGAGCATCTCCAATAG+GGG + chr3_2:68046422-68046441 None:intergenic 35.0%
! CTATTAGAGCATCTCCAATA+GGG + chr3_2:68046423-68046442 None:intergenic 35.0%
! ACTATTAGAGCATCTCCAAT+AGG + chr3_2:68046424-68046443 None:intergenic 35.0%
TATTGGAGATGCTCTAATAG+TGG - chr3_2:68046423-68046442 Msa0419860:intron 35.0%
CCAACGATGATTTGATGAAA+TGG + chr3_2:68046475-68046494 None:intergenic 35.0%
CCATTTCATCAAATCATCGT+TGG - chr3_2:68046472-68046491 Msa0419860:intron 35.0%
GACAGTACCAAGAAAGATAA+TGG - chr3_2:68046837-68046856 Msa0419860:intron 35.0%
!!! TTTTAGAGCTTGCTCATCAA+TGG - chr3_2:68047040-68047059 Msa0419860:intron 35.0%
CAAATTGCATTGTTGTAGGT+TGG + chr3_2:68047110-68047129 None:intergenic 35.0%
CAACAATGCAATTTGAAAGG+TGG - chr3_2:68047115-68047134 Msa0419860:intron 35.0%
ACTAGCAATCCTTATTCTGT+AGG + chr3_2:68047185-68047204 None:intergenic 35.0%
TAGGAGAAAACTCACTGAAA+TGG + chr3_2:68047236-68047255 None:intergenic 35.0%
GATGAGCATATATTTGGATG+TGG + chr3_2:68047414-68047433 None:intergenic 35.0%
TTATGAGACAGCTACCTAAA+TGG + chr3_2:68047447-68047466 None:intergenic 35.0%
CACTAATAGGTCAAAGAAGT+TGG - chr3_2:68047648-68047667 Msa0419860:CDS 35.0%
CTACGATTCTGCACATTAAA+CGG + chr3_2:68047741-68047760 None:intergenic 35.0%
!!! TCATTTTTTTTTTGGTGGCC+AGG - chr3_2:68047864-68047883 Msa0419860:intron 35.0%
!!! CATTTTTTTTTTGGTGGCCA+GGG - chr3_2:68047865-68047884 Msa0419860:intron 35.0%
GAGATTTGAATCACATGAGT+GGG - chr3_2:68048287-68048306 Msa0419860:intron 35.0%
AGATTTGAATCACATGAGTG+GGG - chr3_2:68048288-68048307 Msa0419860:intron 35.0%
!!! TTCGTCTTTTTCAAGTGGTT+TGG + chr3_2:68048353-68048372 None:intergenic 35.0%
AAACCACTTGAAAAAGACGA+AGG - chr3_2:68048352-68048371 Msa0419860:intron 35.0%
TGGAGTCCTCGTATAAAATA+AGG - chr3_2:68048384-68048403 Msa0419860:intron 35.0%
TAACTGAGATGCATAGTGAT+TGG - chr3_2:68048422-68048441 Msa0419860:intron 35.0%
CATGTTGATCTAACAAACCA+TGG + chr3_2:68048775-68048794 None:intergenic 35.0%
GAAATGCAATAATCAGCAGT+AGG + chr3_2:68048950-68048969 None:intergenic 35.0%
GCAATTCAAGGAATGATATG+GGG + chr3_2:68048972-68048991 None:intergenic 35.0%
GTGCAATTCAAGGAATGATA+TGG + chr3_2:68048974-68048993 None:intergenic 35.0%
TCAATCTATGGTGCAATTCA+AGG + chr3_2:68048984-68049003 None:intergenic 35.0%
GAATCACAAACTTATTGTGG+TGG - chr3_2:68049052-68049071 Msa0419860:intron 35.0%
! TGGTAATGTTGGAAAAACTG+AGG + chr3_2:68049267-68049286 None:intergenic 35.0%
TAATCCATTGGAAATCTCTC+TGG + chr3_2:68049539-68049558 None:intergenic 35.0%
TTACACGTTTCAGTTGAATG+AGG - chr3_2:68049610-68049629 Msa0419860:intron 35.0%
! ATGGTAGTGAAATTCATCCA+TGG - chr3_2:68049675-68049694 Msa0419860:intron 35.0%
!!! TGGACATGATTTTTGGGTTT+TGG - chr3_2:68049706-68049725 Msa0419860:intron 35.0%
!!! GGACATGATTTTTGGGTTTT+GGG - chr3_2:68049707-68049726 Msa0419860:intron 35.0%
!!! GATTTTTGGGTTTTGGGATA+TGG - chr3_2:68049713-68049732 Msa0419860:intron 35.0%
! AAACTTTTCTCATCAACACC+TGG + chr3_2:68049755-68049774 None:intergenic 35.0%
TTGGACTGCATTAAGGTTTA+AGG - chr3_2:68049826-68049845 Msa0419860:CDS 35.0%
AATGTGGTTCAATGTGACAA+TGG + chr3_2:68049877-68049896 None:intergenic 35.0%
CATTGAACCACATTTGCATA+TGG - chr3_2:68049883-68049902 Msa0419860:intron 35.0%
!!! AATGGGTGTTATTTTTGCTG+AGG - chr3_2:68049907-68049926 Msa0419860:intron 35.0%
! TCTAAGGTATCATCACTTCA+TGG - chr3_2:68050081-68050100 Msa0419860:CDS 35.0%
! CATGTTGTGATGGGAATCAA+TGG - chr3_2:68044610-68044629 Msa0419860:three_prime_UTR 40.0%
GAATAACAGTTCCCTCTGTA+TGG + chr3_2:68044705-68044724 None:intergenic 40.0%
! TTTGCAGTTTGGAACTCCTT+GGG - chr3_2:68044846-68044865 Msa0419860:CDS 40.0%
TCTCAGTGTGCTATAAATCC+AGG - chr3_2:68044889-68044908 Msa0419860:CDS 40.0%
AGCAGTGGAAACAGAAAAAG+AGG + chr3_2:68044995-68045014 None:intergenic 40.0%
! ATCACATTTTTGACCCCAAG+TGG - chr3_2:68045032-68045051 Msa0419860:CDS 40.0%
! ATGGACATATATGCCACTTG+GGG + chr3_2:68045048-68045067 None:intergenic 40.0%
! CATGGACATATATGCCACTT+GGG + chr3_2:68045049-68045068 None:intergenic 40.0%
ATATATGTCCATGCCAGCAA+TGG - chr3_2:68045056-68045075 Msa0419860:CDS 40.0%
AAGAAAAACCATTGCTGGCA+TGG + chr3_2:68045067-68045086 None:intergenic 40.0%
GCTGTATGGTTCTCTAATAG+TGG - chr3_2:68045247-68045266 Msa0419860:CDS 40.0%
AATGGCTCTCTTTGTTCCTT+TGG + chr3_2:68045278-68045297 None:intergenic 40.0%
TTCACCAATCCATCTCATTG+GGG + chr3_2:68045384-68045403 None:intergenic 40.0%
GTTCACCAATCCATCTCATT+GGG + chr3_2:68045385-68045404 None:intergenic 40.0%
! GTTGAAAGTACGTATACCTG+TGG + chr3_2:68045407-68045426 None:intergenic 40.0%
AAGCACTAATGCTCATATGG+TGG + chr3_2:68045998-68046017 None:intergenic 40.0%
!! GGAAAGCACTAATGCTCATA+TGG + chr3_2:68046001-68046020 None:intergenic 40.0%
GCATTAGTGCTTTCCTAACA+AGG - chr3_2:68046006-68046025 Msa0419860:intron 40.0%
CCATTTAAGGAGTCCTTGTT+AGG + chr3_2:68046022-68046041 None:intergenic 40.0%
CCTAACAAGGACTCCTTAAA+TGG - chr3_2:68046019-68046038 Msa0419860:intron 40.0%
AATAAGTGATGTGTCACGTG+GGG + chr3_2:68046046-68046065 None:intergenic 40.0%
GGAGTCATTGAGTCCTTAAT+AGG + chr3_2:68046090-68046109 None:intergenic 40.0%
ATAGTTGCCCGTTCTTTAAC+GGG - chr3_2:68046333-68046352 Msa0419860:intron 40.0%
ATTGAGTCCCCGTTAAAGAA+CGG + chr3_2:68046344-68046363 None:intergenic 40.0%
ATAGGGGTCCTTACTTAACA+AGG + chr3_2:68046406-68046425 None:intergenic 40.0%
TGTTAAGTAAGGACCCCTAT+TGG - chr3_2:68046406-68046425 Msa0419860:intron 40.0%
GCATAGAAAACCTTGCAACT+AGG - chr3_2:68046445-68046464 Msa0419860:intron 40.0%
TAGAAAACCTTGCAACTAGG+TGG - chr3_2:68046448-68046467 Msa0419860:intron 40.0%
AAAAAATTGACAAGTGGGGG+TGG + chr3_2:68046530-68046549 None:intergenic 40.0%
TAAATGTACAATTGGCCACG+CGG - chr3_2:68046886-68046905 Msa0419860:intron 40.0%
AAAATAAAGCTAACACCGCG+TGG + chr3_2:68046904-68046923 None:intergenic 40.0%
TGTTCCCTAGCAGCTAAATA+TGG - chr3_2:68047079-68047098 Msa0419860:intron 40.0%
GTTCCCTAGCAGCTAAATAT+GGG - chr3_2:68047080-68047099 Msa0419860:intron 40.0%
!! ATATGTAGTGGGTCATAGCT+AGG + chr3_2:68047255-68047274 None:intergenic 40.0%
! CTGCTTTAAACACACACCTA+CGG + chr3_2:68047614-68047633 None:intergenic 40.0%
CGTTTAATGTGCAGAATCGT+AGG - chr3_2:68047739-68047758 Msa0419860:intron 40.0%
GGAGATTTGAATCACATGAG+TGG - chr3_2:68048286-68048305 Msa0419860:intron 40.0%
TGAGATGCATAGTGATTGGT+CGG - chr3_2:68048426-68048445 Msa0419860:intron 40.0%
TCCAATTATGGGGACCAAAT+TGG - chr3_2:68048730-68048749 Msa0419860:intron 40.0%
TCCAATTTGGTCCCCATAAT+TGG + chr3_2:68048734-68048753 None:intergenic 40.0%
TTATGGGGACCAAATTGGAT+TGG - chr3_2:68048735-68048754 Msa0419860:intron 40.0%
TATGGGGACCAAATTGGATT+GGG - chr3_2:68048736-68048755 Msa0419860:intron 40.0%
!! TGTTGTAAGGAGTACTGAGT+AGG + chr3_2:68049141-68049160 None:intergenic 40.0%
!! TGGCTTTCAATTGGTGTTAG+AGG - chr3_2:68049185-68049204 Msa0419860:intron 40.0%
TTAAGGATTGTTAGGGCTTG+TGG + chr3_2:68049227-68049246 None:intergenic 40.0%
TGTTCGGTATCGTTCCATAA+GGG + chr3_2:68049302-68049321 None:intergenic 40.0%
! TGTGAATGCTTTGCTGTGTT+CGG + chr3_2:68049318-68049337 None:intergenic 40.0%
GATTGATCCTAAGTAAGGTG+TGG + chr3_2:68049477-68049496 None:intergenic 40.0%
CCAAATACAACTACCGGTAA+CGG - chr3_2:68049584-68049603 Msa0419860:intron 40.0%
AAACGTGTAAACACCGTTAC+CGG + chr3_2:68049600-68049619 None:intergenic 40.0%
GCAAACCAGTTAAATGGGAA+TGG - chr3_2:68049656-68049675 Msa0419860:intron 40.0%
CACTACCATTCCCATTTAAC+TGG + chr3_2:68049664-68049683 None:intergenic 40.0%
ATTCATCCATGGCATTTGCA+TGG - chr3_2:68049686-68049705 Msa0419860:intron 40.0%
ATAACTGCAGTGTTCCTCAA+AGG + chr3_2:68049794-68049813 None:intergenic 40.0%
CTTAATGCAGTCCAACCATA+TGG + chr3_2:68049821-68049840 None:intergenic 40.0%
CATATGGTTGGACTGCATTA+AGG - chr3_2:68049819-68049838 Msa0419860:CDS 40.0%
ACCACATTTGCATATGGGAA+TGG - chr3_2:68049889-68049908 Msa0419860:intron 40.0%
CCACATTTGCATATGGGAAT+GGG - chr3_2:68049890-68049909 Msa0419860:intron 40.0%
CTGAGGCTGTTCATAAAGTT+AGG - chr3_2:68049924-68049943 Msa0419860:intron 40.0%
CCACACTTAAGAGCTTCTTT+AGG + chr3_2:68049956-68049975 None:intergenic 40.0%
CCTAAAGAAGCTCTTAAGTG+TGG - chr3_2:68049953-68049972 Msa0419860:intron 40.0%
ACAACATGCTCCACACAATC+TGG + chr3_2:68044598-68044617 None:intergenic 45.0%
TTGTGTGGAGCATGTTGTGA+TGG - chr3_2:68044600-68044619 Msa0419860:three_prime_UTR 45.0%
TGTGTGGAGCATGTTGTGAT+GGG - chr3_2:68044601-68044620 Msa0419860:three_prime_UTR 45.0%
TAATAGTTGGGCCTGGAAAC+TGG + chr3_2:68044636-68044655 None:intergenic 45.0%
! TCAGCTTTAATAGTTGGGCC+TGG + chr3_2:68044643-68044662 None:intergenic 45.0%
ACGAACAAGCTCCATACAGA+GGG - chr3_2:68044691-68044710 Msa0419860:three_prime_UTR 45.0%
CAGAGGGAACTGTTATTCAC+TGG - chr3_2:68044707-68044726 Msa0419860:three_prime_UTR 45.0%
GGAACTGTTATTCACTGGCA+TGG - chr3_2:68044712-68044731 Msa0419860:three_prime_UTR 45.0%
TCACTGGCATGGAATTAGAC+AGG - chr3_2:68044723-68044742 Msa0419860:exon 45.0%
! GTTTGCAGTTTGGAACTCCT+TGG - chr3_2:68044845-68044864 Msa0419860:CDS 45.0%
GCATGGACATATATGCCACT+TGG + chr3_2:68045050-68045069 None:intergenic 45.0%
GTGTTAAATATGGTGCAGCC+TGG - chr3_2:68045179-68045198 Msa0419860:CDS 45.0%
TTTGGTATGCAAAGAGCAGC+AGG - chr3_2:68045224-68045243 Msa0419860:CDS 45.0%
TTGGTATGCAAAGAGCAGCA+GGG - chr3_2:68045225-68045244 Msa0419860:CDS 45.0%
ATCTGCTCCTTAGTGATCTG+TGG - chr3_2:68045318-68045337 Msa0419860:CDS 45.0%
TTGTGTGCCACAGATCACTA+AGG + chr3_2:68045328-68045347 None:intergenic 45.0%
CACAAGCTCACATGAACAAG+AGG - chr3_2:68045343-68045362 Msa0419860:CDS 45.0%
AGCTCACATGAACAAGAGGT+TGG - chr3_2:68045347-68045366 Msa0419860:CDS 45.0%
GGTTCACCAATCCATCTCAT+TGG + chr3_2:68045386-68045405 None:intergenic 45.0%
TCTCTCTCCTGGGTAACTAA+CGG + chr3_2:68046303-68046322 None:intergenic 45.0%
TTAGTTACCCAGGAGAGAGA+GGG - chr3_2:68046303-68046322 Msa0419860:intron 45.0%
TAGTTGCCCGTTCTTTAACG+GGG - chr3_2:68046334-68046353 Msa0419860:intron 45.0%
TTGAGTCCCCGTTAAAGAAC+GGG + chr3_2:68046343-68046362 None:intergenic 45.0%
GGAGTGGTCCTTGTTAAGTA+AGG - chr3_2:68046395-68046414 Msa0419860:intron 45.0%
GCTCCCATATTTAGCTGCTA+GGG + chr3_2:68047086-68047105 None:intergenic 45.0%
TGCTCCCATATTTAGCTGCT+AGG + chr3_2:68047087-68047106 None:intergenic 45.0%
TGGCTCCACATGAAGAATCT+GGG + chr3_2:68047155-68047174 None:intergenic 45.0%
TTGGCTCCACATGAAGAATC+TGG + chr3_2:68047156-68047175 None:intergenic 45.0%
GATTGCTAGTACTACGTCCT+TGG - chr3_2:68047195-68047214 Msa0419860:intron 45.0%
CATTAAACGGCTACTTGAGC+TGG + chr3_2:68047728-68047747 None:intergenic 45.0%
!!! GGTCCTTCGTCTTTTTCAAG+TGG + chr3_2:68048358-68048377 None:intergenic 45.0%
AAAGACGAAGGACCACGTTA+TGG - chr3_2:68048364-68048383 Msa0419860:intron 45.0%
TATACGAGGACTCCATAACG+TGG + chr3_2:68048379-68048398 None:intergenic 45.0%
TAGAGGGAATCACATCTTGC+AGG - chr3_2:68048502-68048521 Msa0419860:intron 45.0%
TGAGCACACCCAATCCAATT+TGG + chr3_2:68048747-68048766 None:intergenic 45.0%
! CTTATTGTGGTGGAAGCAGA+TGG - chr3_2:68049062-68049081 Msa0419860:intron 45.0%
CGATGTCATCAACTGCGAAT+GGG + chr3_2:68049100-68049119 None:intergenic 45.0%
TCGATGTCATCAACTGCGAA+TGG + chr3_2:68049101-68049120 None:intergenic 45.0%
GATGACATCGACATCTACTC+AGG - chr3_2:68049110-68049129 Msa0419860:intron 45.0%
TAGGGTCTTGGTCTGTTGTA+AGG + chr3_2:68049154-68049173 None:intergenic 45.0%
GTGTTCGGTATCGTTCCATA+AGG + chr3_2:68049303-68049322 None:intergenic 45.0%
TTGCCAACCACACCTTACTT+AGG - chr3_2:68049467-68049486 Msa0419860:CDS 45.0%
GATCCTAAGTAAGGTGTGGT+TGG + chr3_2:68049473-68049492 None:intergenic 45.0%
ATTGGAAATCTCTCTGGTGG+TGG + chr3_2:68049533-68049552 None:intergenic 45.0%
ACCACCAGAGAGATTTCCAA+TGG - chr3_2:68049532-68049551 Msa0419860:intron 45.0%
TCCATTGGAAATCTCTCTGG+TGG + chr3_2:68049536-68049555 None:intergenic 45.0%
CCGTTACCGGTAGTTGTATT+TGG + chr3_2:68049587-68049606 None:intergenic 45.0%
TCATGTCCATGCAAATGCCA+TGG + chr3_2:68049695-68049714 None:intergenic 45.0%
!!! TGGGTTTTGGGATATGGTGA+AGG - chr3_2:68049719-68049738 Msa0419860:intron 45.0%
!!! GGGTTTTGGGATATGGTGAA+GGG - chr3_2:68049720-68049739 Msa0419860:intron 45.0%
ATTTGACACGTGCACCTTTG+AGG - chr3_2:68049777-68049796 Msa0419860:intron 45.0%
! AGGTTTAAGGCAGATAACCC+TGG - chr3_2:68049839-68049858 Msa0419860:CDS 45.0%
AATGGAATGCCCAAACACCA+GGG + chr3_2:68049859-68049878 None:intergenic 45.0%
CCCATTCCCATATGCAAATG+TGG + chr3_2:68049893-68049912 None:intergenic 45.0%
!! AAATTTCAAAAATAAAATAA+AGG - chr3_2:68046766-68046785 Msa0419860:intron 5.0%
!! TTAAAATTATAATTTAATCA+TGG - chr3_2:68046815-68046834 Msa0419860:intron 5.0%
!!! TTTAAATATCATTTTTTTTT+TGG - chr3_2:68047856-68047875 Msa0419860:intron 5.0%
GGAATCAATGGCCAGTTTCC+AGG - chr3_2:68044622-68044641 Msa0419860:three_prime_UTR 50.0%
! CTGTATGGAGCTTGTTCGTG+AGG + chr3_2:68044690-68044709 None:intergenic 50.0%
CACGAACAAGCTCCATACAG+AGG - chr3_2:68044690-68044709 Msa0419860:three_prime_UTR 50.0%
! TTTGGAACTCCTTGGGCTGA+TGG - chr3_2:68044853-68044872 Msa0419860:CDS 50.0%
ATCTCATTGGGGCTGAAGAG+AGG + chr3_2:68045373-68045392 None:intergenic 50.0%
TCTCTTCAGCCCCAATGAGA+TGG - chr3_2:68045372-68045391 Msa0419860:CDS 50.0%
TCAGCCCCAATGAGATGGAT+TGG - chr3_2:68045377-68045396 Msa0419860:CDS 50.0%
!! GAGATGGATTGGTGAACCAC+AGG - chr3_2:68045388-68045407 Msa0419860:CDS 50.0%
TGTCACGTGGGGTCCATTTA+AGG + chr3_2:68046035-68046054 None:intergenic 50.0%
CTCTCTCCTGGGTAACTAAC+GGG + chr3_2:68046302-68046321 None:intergenic 50.0%
GTTAGTTACCCAGGAGAGAG+AGG - chr3_2:68046302-68046321 Msa0419860:intron 50.0%
ATAAGGACCCTCTCTCTCCT+GGG + chr3_2:68046313-68046332 None:intergenic 50.0%
TATAAGGACCCTCTCTCTCC+TGG + chr3_2:68046314-68046333 None:intergenic 50.0%
TGTTAAGGACCCTCCATTGG+AGG + chr3_2:68046374-68046393 None:intergenic 50.0%
TCCAATGGAGGGTCCTTAAC+AGG - chr3_2:68046373-68046392 Msa0419860:intron 50.0%
CCAATGGAGGGTCCTTAACA+GGG - chr3_2:68046374-68046393 Msa0419860:intron 50.0%
ACAAGGACCACTCCCTGTTA+AGG + chr3_2:68046389-68046408 None:intergenic 50.0%
AAATGGGCCACCTAGTTGCA+AGG + chr3_2:68046458-68046477 None:intergenic 50.0%
! AGCTTGCTCATCAATGGACG+AGG - chr3_2:68047046-68047065 Msa0419860:intron 50.0%
TGCACCCCAGATTCTTCATG+TGG - chr3_2:68047147-68047166 Msa0419860:intron 50.0%
GGCTCCACATGAAGAATCTG+GGG + chr3_2:68047154-68047173 None:intergenic 50.0%
GTCCTTGGCTTCTCTCAACT+TGG - chr3_2:68047210-68047229 Msa0419860:intron 50.0%
CCTCGTGAGTTAAGCTCAGT+TGG + chr3_2:68047930-68047949 None:intergenic 50.0%
CCAACTGAGCTTAACTCACG+AGG - chr3_2:68047927-68047946 Msa0419860:intron 50.0%
! GCATAGTGATTGGTCGGAGT+TGG - chr3_2:68048432-68048451 Msa0419860:intron 50.0%
GGAGTTGGCATGTGAAACAC+TGG - chr3_2:68048447-68048466 Msa0419860:intron 50.0%
GGTGTTAGAGGCAGAAAACC+AGG - chr3_2:68049197-68049216 Msa0419860:intron 50.0%
!! GTGACTGGTGGTGGTAATGT+TGG + chr3_2:68049278-68049297 None:intergenic 50.0%
! TTCCATAAGGGTGTGACTGG+TGG + chr3_2:68049290-68049309 None:intergenic 50.0%
! TCGTTCCATAAGGGTGTGAC+TGG + chr3_2:68049293-68049312 None:intergenic 50.0%
! TGGCTGTGGAGTTCCCATTT+TGG + chr3_2:68049354-68049373 None:intergenic 50.0%
GGTGAAGGGAGATTTAGACC+AGG - chr3_2:68049734-68049753 Msa0419860:intron 50.0%
AGGCAGATAACCCTGGTGTT+TGG - chr3_2:68049846-68049865 Msa0419860:CDS 50.0%
GGCAGATAACCCTGGTGTTT+GGG - chr3_2:68049847-68049866 Msa0419860:CDS 50.0%
CAATGGAATGCCCAAACACC+AGG + chr3_2:68049860-68049879 None:intergenic 50.0%
ATACTATTCACGCGGGGAGT+TGG + chr3_2:68050168-68050187 None:intergenic 50.0%
TCCCCGCGTGAATAGTATGT+AGG - chr3_2:68050170-68050189 Msa0419860:CDS 50.0%
CCCTACATACTATTCACGCG+GGG + chr3_2:68050174-68050193 None:intergenic 50.0%
CCCCGCGTGAATAGTATGTA+GGG - chr3_2:68050171-68050190 Msa0419860:CDS 50.0%
CCCCTACATACTATTCACGC+GGG + chr3_2:68050175-68050194 None:intergenic 50.0%
CCCGCGTGAATAGTATGTAG+GGG - chr3_2:68050172-68050191 Msa0419860:CDS 50.0%
CCCCCTACATACTATTCACG+CGG + chr3_2:68050176-68050195 None:intergenic 50.0%
CCGCGTGAATAGTATGTAGG+GGG - chr3_2:68050173-68050192 Msa0419860:CDS 50.0%
CAAAGAGCAGCAGGGCTGTA+TGG - chr3_2:68045233-68045252 Msa0419860:CDS 55.0%
GTGGAACCCGTTAGTTACCC+AGG - chr3_2:68046293-68046312 Msa0419860:intron 55.0%
CCCTGTTAAGGACCCTCCAT+TGG + chr3_2:68046377-68046396 None:intergenic 55.0%
! GGCCAAGTTGAGAGAAGCCA+AGG + chr3_2:68047215-68047234 None:intergenic 55.0%
! TGGGTGTGCTCAAAGCACCA+TGG - chr3_2:68048755-68048774 Msa0419860:intron 55.0%
! CATAAGGGTGTGACTGGTGG+TGG + chr3_2:68049287-68049306 None:intergenic 55.0%
CACCACCAGTCACACCCTTA+TGG - chr3_2:68049285-68049304 Msa0419860:intron 55.0%
TGTGAGGATTTCGGTGGCTG+TGG + chr3_2:68049368-68049387 None:intergenic 55.0%
GCAGCAGTTCCATCAGCCCA+AGG + chr3_2:68044865-68044884 None:intergenic 60.0%
GGAGGGTCCTTAACAGGGAG+TGG - chr3_2:68046379-68046398 Msa0419860:intron 60.0%
! CAAGGTTCGGGTTCGAACCC+TGG + chr3_2:68047885-68047904 None:intergenic 60.0%
GTTAGGGCTTGTGGTGTGCC+TGG + chr3_2:68049218-68049237 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 68044389 68050337 68044389 ID=Msa0419860;Name=Msa0419860
chr3_2 mRNA 68044389 68050337 68044389 ID=Msa0419860-mRNA-1;Parent=Msa0419860;Name=Msa0419860-mRNA-1;_AED=0.05;_eAED=0.05;_QI=95|1|1|1|1|1|5|349|565
chr3_2 exon 68044389 68045673 68044389 ID=Msa0419860-mRNA-1:exon:15954;Parent=Msa0419860-mRNA-1
chr3_2 exon 68047486 68047680 68047486 ID=Msa0419860-mRNA-1:exon:15953;Parent=Msa0419860-mRNA-1
chr3_2 exon 68049317 68049529 68049317 ID=Msa0419860-mRNA-1:exon:15952;Parent=Msa0419860-mRNA-1
chr3_2 exon 68049781 68049873 68049781 ID=Msa0419860-mRNA-1:exon:15951;Parent=Msa0419860-mRNA-1
chr3_2 exon 68049982 68050337 68049982 ID=Msa0419860-mRNA-1:exon:15950;Parent=Msa0419860-mRNA-1
chr3_2 five_prime_UTR 68050243 68050337 68050243 ID=Msa0419860-mRNA-1:five_prime_utr;Parent=Msa0419860-mRNA-1
chr3_2 CDS 68049982 68050242 68049982 ID=Msa0419860-mRNA-1:cds;Parent=Msa0419860-mRNA-1
chr3_2 CDS 68049781 68049873 68049781 ID=Msa0419860-mRNA-1:cds;Parent=Msa0419860-mRNA-1
chr3_2 CDS 68049317 68049529 68049317 ID=Msa0419860-mRNA-1:cds;Parent=Msa0419860-mRNA-1
chr3_2 CDS 68047486 68047680 68047486 ID=Msa0419860-mRNA-1:cds;Parent=Msa0419860-mRNA-1
chr3_2 CDS 68044738 68045673 68044738 ID=Msa0419860-mRNA-1:cds;Parent=Msa0419860-mRNA-1
chr3_2 three_prime_UTR 68044389 68044737 68044389 ID=Msa0419860-mRNA-1:three_prime_utr;Parent=Msa0419860-mRNA-1
Gene Sequence

>Msa0419860

ATGAGTTTGCTGAAAGCAGTTTTTGTTTGGTGCATATGGTTAGGGTTATTTGAGTTATCATTAGCAAAAGTGAGACACTACAAGTTTGATGTTGAATACATATACAAAAAGCCAGATTGTGTGGAGCATGTTGTGATGGGAATCAATGGCCAGTTTCCAGGCCCAACTATTAAAGCTGAAGTTAATGACACTCTTGTCATTGACCTCACGAACAAGCTCCATACAGAGGGAACTGTTATTCACTGGCATGGAATTAGACAGTTTGGAACTCCTTGGGCTGATGGAACTGCTGCAATCTCTCAGTGTGCTATAAATCCAGGAGAAACTTTTCAATACAGATTCAAAGTTGACAGGCCTGGTACATATTTCTATCATGGACATTTTGGTATGCAAAGAGCAGCAGGGCTGTATGGTTCTCTAATAGTGGATTTACCAAAGGAACAAAGAGAGCCATTTCATTATGATGGTGAGTTTAATCTGCTCCTTAGTGATCTGTGGCACACAAGCTCACATGAACAAGAGGTTGGCCTCTCTTCAGCCCCAATGAGATGGATTGGTGAACCACAGAGCTTGCTCATCAATGGACGAGGACAGTTCAATTGTTCCCTAGCAGCTAAATATGGGAGCACCAACCTACAACAATGCAATTTGAAAGGTGGTGAAGAATGTGCACCCCAGATTCTTCATGTGGAGCCAAAAAAGACCTACAGAATAAGGATTGCTAGTACTACGTCCTTGGCTTCTCTCAACTTGGCCATTTCAAATCACAAACTTATTGTGGTGGAAGCAGATGGAAACTACGTGCACCCATTCGCAGTTGATGACATCGACATCTACTCAGGTGAAACCTACTCAGTACTCCTTACAACAGACCAAGACCCTAAAAAAAACTACTGGCTTTCAATTGGTGTTAGAGGCAGAAAACCAGGCACACCACAAGCCCTAACAATCCTTAACTACAAAACAATCTCTGCCTCAGTTTTTCCAACATTACCACCACCAGTCACACCCTTATGGAACGATACCGAACACAGCAAAGCATTCACAAAACAAATCATTTCCAAAATGGGAACTCCACAGCCACCGAAATCCTCACACCGCACGATTCTCCTCCTCAATACACAAAACAAAATCGGTAGTTTCACTAAATGGGCTATTAACAATGTTTCATTAACATTGCCAACCACACCTTACTTAGGATCAATCAAATTTAAGCTAAACAATACATTTGATAGAAATCCACCACCAGAGAGATTTCCAATGGATTATGACATATTTAAAAATCCAGTTAATCCAAATACAACTACCGGTAACGGTGTTTACACGTTTCAGTTGAATGAGGTTGTTGATGTGATACTACAAAATGCAAACCAGTTAAATGGGAATGGTAGTGAAATTCATCCATGGCATTTGCATGGACATGATTTTTGGGTTTTGGGATATGGTGAAGGGAGATTTAGACCAGGTGTTGATGAGAAAAGTTTCAATTTGACACGTGCACCTTTGAGGAACACTGCAGTTATATTTCCATATGGTTGGACTGCATTAAGGTTTAAGGCAGATAACCCTGGTGTTTGGGCATTCCATTGTCACATTGAACCACATTTGCATATGGGAATGGGTGTTATTTTTGCTGAGGCTGTTCATAAAGTTAGGAACATACCTAAAGAAGCTCTTAAGTGTGGTGCTACAGCCTAG
Protein sequence

>Msa0419860

MSLLKAVFVWCIWLGLFELSLAKVRHYKFDVEYIYKKPDCVEHVVMGINGQFPGPTIKAEVNDTLVIDLTNKLHTEGTVIHWHGIRQFGTPWADGTAAISQCAINPGETFQYRFKVDRPGTYFYHGHFGMQRAAGLYGSLIVDLPKEQREPFHYDGEFNLLLSDLWHTSSHEQEVGLSSAPMRWIGEPQSLLINGRGQFNCSLAAKYGSTNLQQCNLKGGEECAPQILHVEPKKTYRIRIASTTSLASLNLAISNHKLIVVEADGNYVHPFAVDDIDIYSGETYSVLLTTDQDPKKNYWLSIGVRGRKPGTPQALTILNYKTISASVFPTLPPPVTPLWNDTEHSKAFTKQIISKMGTPQPPKSSHRTILLLNTQNKIGSFTKWAINNVSLTLPTTPYLGSIKFKLNNTFDRNPPPERFPMDYDIFKNPVNPNTTTGNGVYTFQLNEVVDVILQNANQLNGNGSEIHPWHLHGHDFWVLGYGEGRFRPGVDEKSFNLTRAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHMGMGVIFAEAVHKVRNIPKEALKCGATA*