Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0091090 | XP_013470361.1 | 96.923 | 195 | 5 | 1 | 40 | 234 | 38 | 231 | 9.40e-131 | 378 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0091090 | A0A072VR01 | 96.923 | 195 | 5 | 1 | 40 | 234 | 38 | 231 | 4.49e-131 | 378 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0036730 | Msa0091090 | -0.821369 | 4.188320e-53 | -8.615850e-47 |
Msa0037270 | Msa0091090 | 0.803221 | 3.865709e-49 | -8.615850e-47 |
Msa0037660 | Msa0091090 | -0.829635 | 4.611355e-55 | -8.615850e-47 |
Msa0044780 | Msa0091090 | 0.934753 | 2.478263e-96 | -8.615850e-47 |
Msa0045620 | Msa0091090 | -0.826765 | 2.266618e-54 | -8.615850e-47 |
Msa0045810 | Msa0091090 | -0.803244 | 3.823737e-49 | -8.615850e-47 |
Msa0046200 | Msa0091090 | -0.800915 | 1.151993e-48 | -8.615850e-47 |
Msa0046970 | Msa0091090 | -0.835117 | 2.022800e-56 | -8.615850e-47 |
Msa0081120 | Msa0091090 | 0.822393 | 2.426972e-53 | -8.615850e-47 |
Msa0081290 | Msa0091090 | 0.814605 | 1.414666e-51 | -8.615850e-47 |
Msa0085580 | Msa0091090 | 0.819380 | 1.197287e-52 | -8.615850e-47 |
Msa0091090 | Msa0120320 | 0.818432 | 1.966644e-52 | -8.615850e-47 |
Msa0091090 | Msa0137010 | 0.843504 | 1.345737e-58 | -8.615850e-47 |
Msa0091090 | Msa0143280 | 0.807498 | 4.907878e-50 | -8.615850e-47 |
Msa0091090 | Msa0160650 | 0.827280 | 1.706878e-54 | -8.615850e-47 |
Msa0091090 | Msa0163960 | 0.812827 | 3.484942e-51 | -8.615850e-47 |
Msa0091090 | Msa0180100 | 0.800488 | 1.407685e-48 | -8.615850e-47 |
Msa0091090 | Msa0183200 | 0.981140 | 7.200351e-152 | -8.615850e-47 |
Msa0091090 | Msa0184510 | 0.813807 | 2.123171e-51 | -8.615850e-47 |
Msa0091090 | Msa0187980 | 0.815389 | 9.479567e-52 | -8.615850e-47 |
Msa0091090 | Msa0207680 | -0.800760 | 1.238877e-48 | -8.615850e-47 |
Msa0091090 | Msa0223190 | 0.821723 | 3.470184e-53 | -8.615850e-47 |
Msa0091090 | Msa0225070 | 0.818743 | 1.671734e-52 | -8.615850e-47 |
Msa0091090 | Msa0225880 | 0.823098 | 1.663016e-53 | -8.615850e-47 |
Msa0091090 | Msa0236940 | -0.825379 | 4.841173e-54 | -8.615850e-47 |
Msa0091090 | Msa0238110 | -0.802553 | 5.312523e-49 | -8.615850e-47 |
Msa0091090 | Msa0238960 | 0.808090 | 3.673434e-50 | -8.615850e-47 |
Msa0091090 | Msa0240590 | 0.811989 | 5.313576e-51 | -8.615850e-47 |
Msa0091090 | Msa0260470 | 0.824511 | 7.758302e-54 | -8.615850e-47 |
Msa0091090 | Msa0264420 | 0.826438 | 2.712748e-54 | -8.615850e-47 |
Msa0091090 | Msa0266140 | 0.801229 | 9.937627e-49 | -8.615850e-47 |
Msa0091090 | Msa0267450 | 0.821695 | 3.521764e-53 | -8.615850e-47 |
Msa0091090 | Msa0267510 | 0.818812 | 1.612268e-52 | -8.615850e-47 |
Msa0091090 | Msa0276800 | 0.831540 | 1.575391e-55 | -8.615850e-47 |
Msa0091090 | Msa0279000 | -0.807087 | 5.997422e-50 | -8.615850e-47 |
Msa0091090 | Msa0290800 | -0.820513 | 6.594158e-53 | -8.615850e-47 |
Msa0091090 | Msa0302310 | 0.832656 | 8.346851e-56 | -8.615850e-47 |
Msa0091090 | Msa0303920 | -0.827420 | 1.579729e-54 | -8.615850e-47 |
Msa0091090 | Msa0304110 | 0.816700 | 4.831188e-52 | -8.615850e-47 |
Msa0091090 | Msa0304520 | 0.836554 | 8.742616e-57 | -8.615850e-47 |
Msa0091090 | Msa0316720 | 0.815017 | 1.146499e-51 | -8.615850e-47 |
Msa0091090 | Msa0328870 | -0.804236 | 2.379590e-49 | -8.615850e-47 |
Msa0091090 | Msa0339670 | 0.823748 | 1.172140e-53 | -8.615850e-47 |
Msa0091090 | Msa0349930 | -0.804670 | 1.932125e-49 | -8.615850e-47 |
Msa0091090 | Msa0367590 | 0.809809 | 1.574703e-50 | -8.615850e-47 |
Msa0091090 | Msa0371350 | 0.806333 | 8.655930e-50 | -8.615850e-47 |
Msa0091090 | Msa0371510 | -0.808898 | 2.470392e-50 | -8.615850e-47 |
Msa0091090 | Msa0373060 | -0.802817 | 4.685536e-49 | -8.615850e-47 |
Msa0091090 | Msa0378310 | 0.875967 | 2.028236e-68 | -8.615850e-47 |
Msa0091090 | Msa0378670 | 0.826579 | 2.510624e-54 | -8.615850e-47 |
Msa0091090 | Msa0378700 | 0.820987 | 5.129448e-53 | -8.615850e-47 |
Msa0091090 | Msa0379480 | -0.826544 | 2.559241e-54 | -8.615850e-47 |
Msa0091090 | Msa0386880 | -0.820749 | 5.818751e-53 | -8.615850e-47 |
Msa0091090 | Msa0387740 | 0.806011 | 1.011896e-49 | -8.615850e-47 |
Msa0091090 | Msa0402770 | -0.805988 | 1.023068e-49 | -8.615850e-47 |
Msa0091090 | Msa0404060 | 0.832927 | 7.149455e-56 | -8.615850e-47 |
Msa0091090 | Msa0404070 | 0.808246 | 3.402545e-50 | -8.615850e-47 |
Msa0091090 | Msa0404140 | -0.805617 | 1.224454e-49 | -8.615850e-47 |
Msa0091090 | Msa0418100 | -0.824549 | 7.601026e-54 | -8.615850e-47 |
Msa0091090 | Msa0419420 | 0.821835 | 3.267924e-53 | -8.615850e-47 |
Msa0091090 | Msa0428330 | 0.895539 | 8.703460e-76 | -8.615850e-47 |
Msa0091090 | Msa0430130 | -0.802319 | 5.934663e-49 | -8.615850e-47 |
Msa0091090 | Msa0434090 | -0.822992 | 1.760225e-53 | -8.615850e-47 |
Msa0091090 | Msa0436100 | -0.834234 | 3.372034e-56 | -8.615850e-47 |
Msa0091090 | Msa0450030 | -0.809075 | 2.263360e-50 | -8.615850e-47 |
Msa0091090 | Msa0457070 | 0.813414 | 2.591195e-51 | -8.615850e-47 |
Msa0091090 | Msa0467170 | -0.810267 | 1.254746e-50 | -8.615850e-47 |
Msa0091090 | Msa0467330 | -0.818093 | 2.345955e-52 | -8.615850e-47 |
Msa0091090 | Msa0468360 | 0.863195 | 2.959737e-64 | -8.615850e-47 |
Msa0091090 | Msa0475330 | -0.803305 | 3.714048e-49 | -8.615850e-47 |
Msa0091090 | Msa0477900 | -0.849806 | 2.552613e-60 | -8.615850e-47 |
Msa0091090 | Msa0484210 | 0.855364 | 6.629872e-62 | -8.615850e-47 |
Msa0091090 | Msa0500420 | -0.800003 | 1.766753e-48 | -8.615850e-47 |
Msa0091090 | Msa0508780 | 0.805444 | 1.330803e-49 | -8.615850e-47 |
Msa0091090 | Msa0521940 | -0.809188 | 2.140276e-50 | -8.615850e-47 |
Msa0091090 | Msa0528310 | -0.802992 | 4.311767e-49 | -8.615850e-47 |
Msa0091090 | Msa0529360 | -0.802580 | 5.244126e-49 | -8.615850e-47 |
Msa0091090 | Msa0530340 | 0.807811 | 4.212271e-50 | -8.615850e-47 |
Msa0091090 | Msa0549540 | 0.813907 | 2.017654e-51 | -8.615850e-47 |
Msa0091090 | Msa0555280 | -0.840257 | 9.697134e-58 | -8.615850e-47 |
Msa0091090 | Msa0556070 | 0.834110 | 3.621431e-56 | -8.615850e-47 |
Msa0091090 | Msa0565860 | 0.800384 | 1.478171e-48 | -8.615850e-47 |
Msa0091090 | Msa0568290 | 0.835205 | 1.921396e-56 | -8.615850e-47 |
Msa0091090 | Msa0568460 | 0.843559 | 1.300626e-58 | -8.615850e-47 |
Msa0091090 | Msa0579170 | 0.807459 | 5.002387e-50 | -8.615850e-47 |
Msa0091090 | Msa0579230 | 0.815612 | 8.456964e-52 | -8.615850e-47 |
Msa0091090 | Msa0587250 | 0.802171 | 6.366005e-49 | -8.615850e-47 |
Msa0091090 | Msa0587360 | 0.822893 | 1.856762e-53 | -8.615850e-47 |
Msa0091090 | Msa0604880 | 0.824721 | 6.922463e-54 | -8.615850e-47 |
Msa0091090 | Msa0608780 | 0.818833 | 1.594315e-52 | -8.615850e-47 |
Msa0091090 | Msa0608820 | -0.833198 | 6.122129e-56 | -8.615850e-47 |
Msa0091090 | Msa0610700 | 0.800564 | 1.358638e-48 | -8.615850e-47 |
Msa0091090 | Msa0618840 | -0.844933 | 5.560759e-59 | -8.615850e-47 |
Msa0091090 | Msa0618990 | -0.850466 | 1.667652e-60 | -8.615850e-47 |
Msa0091090 | Msa0623310 | -0.812380 | 4.364083e-51 | -8.615850e-47 |
Msa0091090 | Msa0624930 | -0.804457 | 2.140846e-49 | -8.615850e-47 |
Msa0091090 | Msa0630850 | 0.817041 | 4.049967e-52 | -8.615850e-47 |
Msa0091090 | Msa0646190 | 0.811088 | 8.338495e-51 | -8.615850e-47 |
Msa0091090 | Msa0649250 | 0.819079 | 1.401983e-52 | -8.615850e-47 |
Msa0091090 | Msa0659020 | 0.869961 | 2.090657e-66 | -8.615850e-47 |
Msa0091090 | Msa0659300 | -0.836126 | 1.123419e-56 | -8.615850e-47 |
Msa0091090 | Msa0665220 | 0.806966 | 6.364442e-50 | -8.615850e-47 |
Msa0091090 | Msa0679780 | 0.801092 | 1.059638e-48 | -8.615850e-47 |
Msa0091090 | Msa0681880 | 0.808544 | 2.940370e-50 | -8.615850e-47 |
Msa0091090 | Msa0689830 | -0.802730 | 4.882694e-49 | -8.615850e-47 |
Msa0091090 | Msa0691610 | -0.829524 | 4.906589e-55 | -8.615850e-47 |
Msa0091090 | Msa0701090 | 0.813340 | 2.690146e-51 | -8.615850e-47 |
Msa0091090 | Msa0704780 | 0.823088 | 1.672040e-53 | -8.615850e-47 |
Msa0091090 | Msa0705460 | -0.844798 | 6.046221e-59 | -8.615850e-47 |
Msa0091090 | Msa0705810 | 0.822963 | 1.787920e-53 | -8.615850e-47 |
Msa0091090 | Msa0708980 | -0.831038 | 2.093925e-55 | -8.615850e-47 |
Msa0091090 | Msa0712910 | 0.823459 | 1.369232e-53 | -8.615850e-47 |
Msa0091090 | Msa0719270 | -0.830800 | 2.394081e-55 | -8.615850e-47 |
Msa0091090 | Msa0732970 | -0.851088 | 1.114275e-60 | -8.615850e-47 |
Msa0091090 | Msa0742090 | 0.831556 | 1.560900e-55 | -8.615850e-47 |
Msa0091090 | Msa0745140 | -0.805013 | 1.638137e-49 | -8.615850e-47 |
Msa0091090 | Msa0746650 | -0.811689 | 6.175966e-51 | -8.615850e-47 |
Msa0091090 | Msa0758780 | 0.830357 | 3.072948e-55 | -8.615850e-47 |
Msa0091090 | Msa0758810 | 0.819395 | 1.187827e-52 | -8.615850e-47 |
Msa0091090 | Msa0761830 | -0.822614 | 2.155802e-53 | -8.615850e-47 |
Msa0091090 | Msa0771910 | -0.824611 | 7.348301e-54 | -8.615850e-47 |
Msa0091090 | Msa0773960 | -0.853339 | 2.551516e-61 | -8.615850e-47 |
Msa0091090 | Msa0775660 | -0.806349 | 8.589586e-50 | -8.615850e-47 |
Msa0091090 | Msa0776640 | -0.803164 | 3.973217e-49 | -8.615850e-47 |
Msa0091090 | Msa0794030 | -0.819220 | 1.302079e-52 | -8.615850e-47 |
Msa0091090 | Msa0803530 | 0.817899 | 2.596159e-52 | -8.615850e-47 |
Msa0091090 | Msa0804170 | -0.819369 | 1.204514e-52 | -8.615850e-47 |
Msa0091090 | Msa0810080 | -0.809588 | 1.756827e-50 | -8.615850e-47 |
Msa0091090 | Msa0823310 | 0.830319 | 3.140301e-55 | -8.615850e-47 |
Msa0091090 | Msa0825920 | -0.801911 | 7.200658e-49 | -8.615850e-47 |
Msa0091090 | Msa0838620 | 0.852065 | 5.892451e-61 | -8.615850e-47 |
Msa0091090 | Msa0838670 | 0.820550 | 6.464649e-53 | -8.615850e-47 |
Msa0091090 | Msa0840520 | -0.828443 | 8.963270e-55 | -8.615850e-47 |
Msa0091090 | Msa0842180 | -0.806998 | 6.263192e-50 | -8.615850e-47 |
Msa0091090 | Msa0846300 | 0.813011 | 3.176264e-51 | -8.615850e-47 |
Msa0091090 | Msa0846900 | -0.831223 | 1.885740e-55 | -8.615850e-47 |
Msa0091090 | Msa0850600 | -0.815846 | 7.498010e-52 | -8.615850e-47 |
Msa0091090 | Msa0852090 | 0.810404 | 1.172374e-50 | -8.615850e-47 |
Msa0091090 | Msa0862230 | 0.807617 | 4.631305e-50 | -8.615850e-47 |
Msa0091090 | Msa0879650 | 0.813194 | 2.896432e-51 | -8.615850e-47 |
Msa0091090 | Msa0887100 | 0.838186 | 3.339014e-57 | -8.615850e-47 |
Msa0091090 | Msa0898830 | 0.801244 | 9.867107e-49 | -8.615850e-47 |
Msa0091090 | Msa0913140 | 0.825818 | 3.809674e-54 | -8.615850e-47 |
Msa0091090 | Msa0930210 | -0.821608 | 3.688499e-53 | -8.615850e-47 |
Msa0091090 | Msa0932150 | -0.813848 | 2.079752e-51 | -8.615850e-47 |
Msa0091090 | Msa0950470 | 0.845899 | 3.045621e-59 | -8.615850e-47 |
Msa0091090 | Msa0950570 | 0.847882 | 8.731141e-60 | -8.615850e-47 |
Msa0091090 | Msa0967780 | -0.801481 | 8.824665e-49 | -8.615850e-47 |
Msa0091090 | Msa0967900 | 0.810318 | 1.223187e-50 | -8.615850e-47 |
Msa0091090 | Msa0970270 | -0.804836 | 1.783890e-49 | -8.615850e-47 |
Msa0091090 | Msa0982730 | -0.827021 | 1.968781e-54 | -8.615850e-47 |
Msa0091090 | Msa0982960 | -0.816603 | 5.079139e-52 | -8.615850e-47 |
Msa0091090 | Msa0999590 | 0.858314 | 8.971965e-63 | -8.615850e-47 |
Msa0091090 | Msa1004720 | 0.805638 | 1.211908e-49 | -8.615850e-47 |
Msa0091090 | Msa1031530 | 0.838521 | 2.737752e-57 | -8.615850e-47 |
Msa0091090 | Msa1043020 | 0.808574 | 2.897113e-50 | -8.615850e-47 |
Msa0091090 | Msa1057620 | 0.817883 | 2.617851e-52 | -8.615850e-47 |
Msa0091090 | Msa1070360 | -0.802803 | 4.717030e-49 | -8.615850e-47 |
Msa0091090 | Msa1070630 | 0.831113 | 2.006583e-55 | -8.615850e-47 |
Msa0091090 | Msa1088160 | -0.801434 | 9.020881e-49 | -8.615850e-47 |
Msa0091090 | Msa1088740 | 0.823478 | 1.355375e-53 | -8.615850e-47 |
Msa0091090 | Msa1094630 | -0.807741 | 4.357923e-50 | -8.615850e-47 |
Msa0091090 | Msa1096510 | 0.809659 | 1.696008e-50 | -8.615850e-47 |
Msa0091090 | Msa1096520 | 0.816472 | 5.433883e-52 | -8.615850e-47 |
Msa0091090 | Msa1096570 | 0.812651 | 3.808719e-51 | -8.615850e-47 |
Msa0091090 | Msa1101610 | 0.811389 | 7.175408e-51 | -8.615850e-47 |
Msa0091090 | Msa1101980 | 0.801197 | 1.008615e-48 | -8.615850e-47 |
Msa0091090 | Msa1124210 | -0.808501 | 3.002993e-50 | -8.615850e-47 |
Msa0091090 | Msa1125450 | 0.806073 | 9.820919e-50 | -8.615850e-47 |
Msa0091090 | Msa1127200 | -0.809853 | 1.541268e-50 | -8.615850e-47 |
Msa0091090 | Msa1133440 | 0.863525 | 2.339057e-64 | -8.615850e-47 |
Msa0091090 | Msa1158450 | 0.834882 | 2.317146e-56 | -8.615850e-47 |
Msa0091090 | Msa1164570 | 0.807717 | 4.409242e-50 | -8.615850e-47 |
Msa0091090 | Msa1165460 | -0.803565 | 3.281085e-49 | -8.615850e-47 |
Msa0091090 | Msa1173380 | 0.803633 | 3.176583e-49 | -8.615850e-47 |
Msa0091090 | Msa1190350 | 0.842967 | 1.870807e-58 | -8.615850e-47 |
Msa0091090 | Msa1199580 | 0.841030 | 6.083035e-58 | -8.615850e-47 |
Msa0091090 | Msa1205270 | 0.822269 | 2.592504e-53 | -8.615850e-47 |
Msa0091090 | Msa1206040 | -0.811187 | 7.937491e-51 | -8.615850e-47 |
Msa0091090 | Msa1209160 | 0.801096 | 1.058059e-48 | -8.615850e-47 |
Msa0091090 | Msa1219060 | 0.838941 | 2.132354e-57 | -8.615850e-47 |
Msa0091090 | Msa1236860 | 0.873370 | 1.549453e-67 | -8.615850e-47 |
Msa0091090 | Msa1240060 | -0.832701 | 8.133372e-56 | -8.615850e-47 |
Msa0091090 | Msa1243630 | 0.869358 | 3.287987e-66 | -8.615850e-47 |
Msa0091090 | Msa1244220 | 0.868263 | 7.433599e-66 | -8.615850e-47 |
Msa0091090 | Msa1266120 | 0.816030 | 6.822893e-52 | -8.615850e-47 |
Msa0091090 | Msa1281370 | -0.828352 | 9.428027e-55 | -8.615850e-47 |
Msa0091090 | Msa1286860 | 0.811449 | 6.961620e-51 | -8.615850e-47 |
Msa0091090 | Msa1297220 | 0.829970 | 3.821592e-55 | -8.615850e-47 |
Msa0091090 | Msa1317240 | 0.850458 | 1.676125e-60 | -8.615850e-47 |
Msa0091090 | Msa1320530 | -0.826471 | 2.664438e-54 | -8.615850e-47 |
Msa0091090 | Msa1323260 | 0.839143 | 1.889453e-57 | -8.615850e-47 |
Msa0091090 | Msa1328630 | 0.850685 | 1.447161e-60 | -8.615850e-47 |
Msa0091090 | Msa1328720 | 0.841151 | 5.654021e-58 | -8.615850e-47 |
Msa0091090 | Msa1328870 | -0.803163 | 3.973648e-49 | -8.615850e-47 |
Msa0091090 | Msa1332690 | 0.839859 | 1.231554e-57 | -8.615850e-47 |
Msa0091090 | Msa1334560 | -0.805044 | 1.614468e-49 | -8.615850e-47 |
Msa0091090 | Msa1343450 | 0.839694 | 1.359582e-57 | -8.615850e-47 |
Msa0091090 | Msa1347390 | -0.808682 | 2.747214e-50 | -8.615850e-47 |
Msa0091090 | Msa1348330 | -0.813830 | 2.098894e-51 | -8.615850e-47 |
Msa0091090 | Msa1359890 | 0.818971 | 1.483714e-52 | -8.615850e-47 |
Msa0091090 | Msa1363070 | 0.807400 | 5.148878e-50 | -8.615850e-47 |
Msa0091090 | Msa1369180 | 0.811552 | 6.613174e-51 | -8.615850e-47 |
Msa0091090 | Msa1371800 | -0.828828 | 7.237282e-55 | -8.615850e-47 |
Msa0091090 | Msa1373390 | 0.800869 | 1.177157e-48 | -8.615850e-47 |
Msa0091090 | Msa1375000 | 0.817244 | 3.646417e-52 | -8.615850e-47 |
Msa0091090 | Msa1376310 | -0.830860 | 2.315022e-55 | -8.615850e-47 |
Msa0091090 | Msa1382030 | 0.808734 | 2.677794e-50 | -8.615850e-47 |
Msa0091090 | Msa1382750 | 0.843266 | 1.557761e-58 | -8.615850e-47 |
Msa0091090 | Msa1386250 | 0.803374 | 3.594782e-49 | -8.615850e-47 |
Msa0091090 | Msa1398460 | -0.824449 | 8.022130e-54 | -8.615850e-47 |
Msa0091090 | Msa1406090 | -0.812095 | 5.036300e-51 | -8.615850e-47 |
Msa0091090 | Msa1412740 | 0.808738 | 2.672820e-50 | -8.615850e-47 |
Msa0091090 | Msa1413020 | -0.819340 | 1.222405e-52 | -8.615850e-47 |
Msa0091090 | Msa1425500 | -0.803517 | 3.356693e-49 | -8.615850e-47 |
Msa0091090 | Msa1427180 | 0.822245 | 2.625865e-53 | -8.615850e-47 |
Msa0091090 | Msa1436620 | -0.824166 | 9.352437e-54 | -8.615850e-47 |
Msa0091090 | Msa1450630 | 0.911934 | 3.464105e-83 | -8.615850e-47 |
Msa0091090 | Msa1460970 | -0.811944 | 5.433137e-51 | -8.615850e-47 |
Msa0091090 | Msa1462780 | -0.804818 | 1.799513e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0091090 | MtrunA17_Chr1g0211411 | 96.923 | 195 | 5 | 1 | 40 | 234 | 38 | 231 | 8.64e-135 | 378 |
Msa0091090 | MtrunA17_Chr4g0023841 | 55.556 | 54 | 24 | 0 | 143 | 196 | 89 | 142 | 1.46e-15 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0091090 | AT5G27280.1 | 55.959 | 193 | 61 | 4 | 46 | 233 | 39 | 212 | 5.98e-65 | 201 |
Msa0091090 | AT1G68730.1 | 55.000 | 60 | 27 | 0 | 137 | 196 | 96 | 155 | 3.39e-16 | 73.9 |
Find 68 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATCACTTGAACTTGTTTC+AGG | 0.209481 | 1_2:-73208605 | Msa0091090:CDS |
ATGAGTGAATTGCCAGCTTA+TGG | 0.279283 | 1_2:-73208467 | Msa0091090:exon |
CTTCATCTTGTGAGATGGTT+AGG | 0.294170 | 1_2:-73208216 | Msa0091090:three_prime_UTR |
CTGCCTCTGATCATCATATA+AGG | 0.303523 | 1_2:-73208432 | Msa0091090:three_prime_UTR |
AGAGGATGGACAACAGGTTC+TGG | 0.304476 | 1_2:-73209634 | Msa0091090:CDS |
TCCTTGCCAACAGCAGGAAC+AGG | 0.348441 | 1_2:+73209598 | None:intergenic |
GTTGGCAAGGATGGCCAATC+TGG | 0.368867 | 1_2:-73209586 | Msa0091090:CDS |
TACATTGGAAAGAGGGGAAA+TGG | 0.383769 | 1_2:+73209816 | None:intergenic |
GTTCCTGCTGTTGGCAAGGA+TGG | 0.384950 | 1_2:-73209595 | Msa0091090:CDS |
TGGCAATTCACTCATGTAAC+GGG | 0.396746 | 1_2:+73208475 | None:intergenic |
CCCTGTTCCTGCTGTTGGCA+AGG | 0.400986 | 1_2:-73209599 | Msa0091090:CDS |
TGATCTCAAGTTCAGGTTCA+TGG | 0.426042 | 1_2:-73208530 | Msa0091090:CDS |
TCAGGATGCGGCGATGGGAC+TGG | 0.430291 | 1_2:-73209677 | Msa0091090:intron |
AGCGATGAGCATCCTTCGCC+TGG | 0.430343 | 1_2:+73209516 | None:intergenic |
AAGGTTGAAGTTGAGTTCGT+TGG | 0.430732 | 1_2:+73209867 | None:intergenic |
AAACAGCGATTAGCGGGAAC+TGG | 0.436587 | 1_2:+73209841 | None:intergenic |
TGTATTGTTGTGTTTGTGTT+GGG | 0.441366 | 1_2:-73210236 | None:intergenic |
CTTCTCTTCATCTTGTGAGA+TGG | 0.447042 | 1_2:-73208221 | Msa0091090:three_prime_UTR |
GATGGGATGATCTCAAGTTC+AGG | 0.447144 | 1_2:-73208537 | Msa0091090:CDS |
TCTTGTTGAAGAAGGGAAGA+TGG | 0.460295 | 1_2:+73210098 | None:intergenic |
AAAATATATGCTCCATAAGC+TGG | 0.465894 | 1_2:+73208455 | None:intergenic |
GTGGGATCAGGATGCGGCGA+TGG | 0.473920 | 1_2:-73209683 | Msa0091090:intron |
GAGGATGGACAACAGGTTCT+GGG | 0.476565 | 1_2:-73209633 | Msa0091090:CDS |
ACAGGTAGAGGATGGACAAC+AGG | 0.485934 | 1_2:-73209640 | Msa0091090:CDS |
GTGTATTGTTGTGTTTGTGT+TGG | 0.491026 | 1_2:-73210237 | None:intergenic |
AGTAGTTCGCTGGCCACAAA+TGG | 0.495726 | 1_2:+73209483 | None:intergenic |
TGGCCATCCTTGCCAACAGC+AGG | 0.511703 | 1_2:+73209592 | None:intergenic |
CTGGTGTTGAGTGCAGCAAC+AGG | 0.517261 | 1_2:-73209658 | Msa0091090:CDS |
TTGAGTGCAGCAACAGGTAG+AGG | 0.519099 | 1_2:-73209652 | Msa0091090:CDS |
AGAGGGTAGACGAAAGTGAA+AGG | 0.519884 | 1_2:+73210032 | None:intergenic |
GATGATGTTCTTGTTGAAGA+AGG | 0.523407 | 1_2:+73210090 | None:intergenic |
TGGGATCAGGATGCGGCGAT+GGG | 0.524036 | 1_2:-73209682 | Msa0091090:intron |
ATGGAGAAACAGCGATTAGC+GGG | 0.527617 | 1_2:+73209835 | None:intergenic |
TTGGCAAGGATGGCCAATCT+GGG | 0.529425 | 1_2:-73209585 | Msa0091090:CDS |
AATCCTCATGCTTACACTGA+TGG | 0.541011 | 1_2:-73209451 | Msa0091090:CDS |
AAATATTGTCAGTCCCAGAT+TGG | 0.547211 | 1_2:+73209572 | None:intergenic |
GAAGGGAAGATGGAGAAAGA+AGG | 0.549957 | 1_2:+73210108 | None:intergenic |
GATTAGCGGGAACTGGAGAA+AGG | 0.553924 | 1_2:+73209848 | None:intergenic |
CACTCTTCACTAAATCTCCC+AGG | 0.555459 | 1_2:-73209534 | Msa0091090:CDS |
TTAAGTATAAAGGTCCTGGA+TGG | 0.555752 | 1_2:-73208555 | Msa0091090:CDS |
GAGAATCAATCTGATGATGA+TGG | 0.556875 | 1_2:-73210169 | Msa0091090:exon |
ATGATGTTCTTGTTGAAGAA+GGG | 0.560562 | 1_2:+73210091 | None:intergenic |
CTGGCAATTCACTCATGTAA+CGG | 0.562439 | 1_2:+73208474 | None:intergenic |
TCACTAAATCTCCCAGGCGA+AGG | 0.574635 | 1_2:-73209528 | Msa0091090:CDS |
GAAGAGTGACCATGGGAAAG+TGG | 0.574914 | 1_2:+73209549 | None:intergenic |
AACTTGAGATCATCCCATCC+AGG | 0.575509 | 1_2:+73208541 | None:intergenic |
TAAGTATAAAGGTCCTGGAT+GGG | 0.576355 | 1_2:-73208554 | Msa0091090:CDS |
ACAATATTTCCACTTTCCCA+TGG | 0.577693 | 1_2:-73209558 | Msa0091090:CDS |
ACATTACATACATTGGAAAG+AGG | 0.577849 | 1_2:+73209808 | None:intergenic |
CCTTGCCAACAGCAGGAACA+GGG | 0.581470 | 1_2:+73209599 | None:intergenic |
CATTACATACATTGGAAAGA+GGG | 0.582616 | 1_2:+73209809 | None:intergenic |
GTGCAGCAACAGGTAGAGGA+TGG | 0.602472 | 1_2:-73209648 | Msa0091090:CDS |
ATTTAGTGAAGAGTGACCAT+GGG | 0.605907 | 1_2:+73209542 | None:intergenic |
GATTTAGTGAAGAGTGACCA+TGG | 0.607466 | 1_2:+73209541 | None:intergenic |
ATGGACAACAGGTTCTGGGA+TGG | 0.609246 | 1_2:-73209629 | Msa0091090:CDS |
ACAACAGGTTCTGGGATGGA+AGG | 0.611576 | 1_2:-73209625 | Msa0091090:CDS |
TAATAGCGCGAGTAGTTCGC+TGG | 0.613634 | 1_2:+73209473 | None:intergenic |
AGAATACGGACGCTTAGAAG+AGG | 0.614308 | 1_2:+73210014 | None:intergenic |
CAATGCGTATCATAAGCTTG+TGG | 0.615319 | 1_2:-73208626 | Msa0091090:CDS |
GAATACGGACGCTTAGAAGA+GGG | 0.616215 | 1_2:+73210015 | None:intergenic |
ATTACATACATTGGAAAGAG+GGG | 0.621264 | 1_2:+73209810 | None:intergenic |
GCGATGAGCATCCTTCGCCT+GGG | 0.627050 | 1_2:+73209517 | None:intergenic |
ATTCCTTATATGATGATCAG+AGG | 0.628474 | 1_2:+73208429 | None:intergenic |
AATGGAGAAACAGCGATTAG+CGG | 0.635500 | 1_2:+73209834 | None:intergenic |
TTGCCAACAGCAGGAACAGG+GGG | 0.652495 | 1_2:+73209601 | None:intergenic |
GTGCCATCAGTGTAAGCATG+AGG | 0.652803 | 1_2:+73209448 | None:intergenic |
CTTGCCAACAGCAGGAACAG+GGG | 0.682731 | 1_2:+73209600 | None:intergenic |
GGCAATTCACTCATGTAACG+GGG | 0.702863 | 1_2:+73208476 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATAATAGTAAAATTAATGA+TGG | + | chr1_2:73208466-73208485 | None:intergenic | 10.0% |
!!! | TATATTTTTTTTTTCATTTC+AGG | - | chr1_2:73208482-73208501 | Msa0091090:exon | 10.0% |
!! | AATCATGTTTAAATTATAAA+TGG | + | chr1_2:73209247-73209266 | None:intergenic | 10.0% |
!!! | TTATAATTTAAACATGATTT+TGG | - | chr1_2:73209248-73209267 | Msa0091090:intron | 10.0% |
!! | TATAATAGTAAAATTAATGA+TGG | + | chr1_2:73208466-73208485 | None:intergenic | 10.0% |
!!! | TATATTTTTTTTTTCATTTC+AGG | - | chr1_2:73208482-73208501 | Msa0091090:exon | 10.0% |
!! | AATCATGTTTAAATTATAAA+TGG | + | chr1_2:73209247-73209266 | None:intergenic | 10.0% |
!!! | TTATAATTTAAACATGATTT+TGG | - | chr1_2:73209248-73209267 | Msa0091090:intron | 10.0% |
!! | ATATAAAAATAGGGAAATTA+GGG | + | chr1_2:73208644-73208663 | None:intergenic | 15.0% |
!! | TAAATTCTGATTATAATTTG+TGG | - | chr1_2:73208714-73208733 | Msa0091090:intron | 15.0% |
!!! | AAATTCTGATTATAATTTGT+GGG | - | chr1_2:73208715-73208734 | Msa0091090:intron | 15.0% |
!!! | AATTCAAGTTTTAAGTATAA+AGG | - | chr1_2:73209851-73209870 | Msa0091090:CDS | 15.0% |
!! | ATATAAAAATAGGGAAATTA+GGG | + | chr1_2:73208644-73208663 | None:intergenic | 15.0% |
!! | TAAATTCTGATTATAATTTG+TGG | - | chr1_2:73208714-73208733 | Msa0091090:intron | 15.0% |
!!! | AAATTCTGATTATAATTTGT+GGG | - | chr1_2:73208715-73208734 | Msa0091090:intron | 15.0% |
!!! | AATTCAAGTTTTAAGTATAA+AGG | - | chr1_2:73209851-73209870 | Msa0091090:CDS | 15.0% |
!! | CATATAAAAATAGGGAAATT+AGG | + | chr1_2:73208645-73208664 | None:intergenic | 20.0% |
!! | ATCCATCACATATAAAAATA+GGG | + | chr1_2:73208653-73208672 | None:intergenic | 20.0% |
!! | AAAAATTTCATTGCAAGAAA+GGG | - | chr1_2:73209646-73209665 | Msa0091090:CDS | 20.0% |
!! | CATATAAAAATAGGGAAATT+AGG | + | chr1_2:73208645-73208664 | None:intergenic | 20.0% |
!! | ATCCATCACATATAAAAATA+GGG | + | chr1_2:73208653-73208672 | None:intergenic | 20.0% |
!! | AAAAATTTCATTGCAAGAAA+GGG | - | chr1_2:73209646-73209665 | Msa0091090:CDS | 20.0% |
!!! | TTCCCTATTTTTATATGTGA+TGG | - | chr1_2:73208648-73208667 | Msa0091090:intron | 25.0% |
! | CATCCATCACATATAAAAAT+AGG | + | chr1_2:73208654-73208673 | None:intergenic | 25.0% |
!!! | TGTTTTTGTTCAGGTAATAA+TGG | - | chr1_2:73208991-73209010 | Msa0091090:intron | 25.0% |
!! | TCAGGTAATAATGGTTTTTA+AGG | - | chr1_2:73209000-73209019 | Msa0091090:intron | 25.0% |
!!! | ATAATGGTTTTTAAGGAAGT+AGG | - | chr1_2:73209007-73209026 | Msa0091090:intron | 25.0% |
! | ATTATTTATGTGAACTGTCA+TGG | - | chr1_2:73209141-73209160 | Msa0091090:intron | 25.0% |
! | TAAATTATAAATGGCATGTC+CGG | + | chr1_2:73209238-73209257 | None:intergenic | 25.0% |
!! | TGAAGGTTTTTAAATTCAAC+CGG | + | chr1_2:73209588-73209607 | None:intergenic | 25.0% |
! | GAAAAATTTCATTGCAAGAA+AGG | - | chr1_2:73209645-73209664 | Msa0091090:CDS | 25.0% |
! | TGCTTAATAGTAAAAATGTC+AGG | - | chr1_2:73210047-73210066 | Msa0091090:CDS | 25.0% |
! | GCTTAATAGTAAAAATGTCA+GGG | - | chr1_2:73210048-73210067 | Msa0091090:CDS | 25.0% |
! | CTTAATAGTAAAAATGTCAG+GGG | - | chr1_2:73210049-73210068 | Msa0091090:CDS | 25.0% |
! | TAAAAATATCCCAACACAAA+CGG | + | chr1_2:73208192-73208211 | None:intergenic | 25.0% |
!!! | TTCCCTATTTTTATATGTGA+TGG | - | chr1_2:73208648-73208667 | Msa0091090:intron | 25.0% |
! | CATCCATCACATATAAAAAT+AGG | + | chr1_2:73208654-73208673 | None:intergenic | 25.0% |
!!! | TGTTTTTGTTCAGGTAATAA+TGG | - | chr1_2:73208991-73209010 | Msa0091090:intron | 25.0% |
!! | TCAGGTAATAATGGTTTTTA+AGG | - | chr1_2:73209000-73209019 | Msa0091090:intron | 25.0% |
!!! | ATAATGGTTTTTAAGGAAGT+AGG | - | chr1_2:73209007-73209026 | Msa0091090:intron | 25.0% |
! | ATTATTTATGTGAACTGTCA+TGG | - | chr1_2:73209141-73209160 | Msa0091090:intron | 25.0% |
! | TAAATTATAAATGGCATGTC+CGG | + | chr1_2:73209238-73209257 | None:intergenic | 25.0% |
!! | TGAAGGTTTTTAAATTCAAC+CGG | + | chr1_2:73209588-73209607 | None:intergenic | 25.0% |
! | GAAAAATTTCATTGCAAGAA+AGG | - | chr1_2:73209645-73209664 | Msa0091090:CDS | 25.0% |
! | TGCTTAATAGTAAAAATGTC+AGG | - | chr1_2:73210047-73210066 | Msa0091090:CDS | 25.0% |
! | GCTTAATAGTAAAAATGTCA+GGG | - | chr1_2:73210048-73210067 | Msa0091090:CDS | 25.0% |
! | CTTAATAGTAAAAATGTCAG+GGG | - | chr1_2:73210049-73210068 | Msa0091090:CDS | 25.0% |
!!! | TTGTGTTGGGATATTTTTAG+AGG | - | chr1_2:73208193-73208212 | Msa0091090:three_prime_UTR | 30.0% |
!!! | ATATTTTTAGAGGTGAAGAG+AGG | - | chr1_2:73208203-73208222 | Msa0091090:three_prime_UTR | 30.0% |
ATGATGTTCTTGTTGAAGAA+GGG | + | chr1_2:73208328-73208347 | None:intergenic | 30.0% | |
ATTACATACATTGGAAAGAG+GGG | + | chr1_2:73208609-73208628 | None:intergenic | 30.0% | |
CATTACATACATTGGAAAGA+GGG | + | chr1_2:73208610-73208629 | None:intergenic | 30.0% | |
ACATTACATACATTGGAAAG+AGG | + | chr1_2:73208611-73208630 | None:intergenic | 30.0% | |
GAGAGAAACATTACATACAT+TGG | + | chr1_2:73208618-73208637 | None:intergenic | 30.0% | |
! | TGATTATAATTTGTGGGATC+AGG | - | chr1_2:73208721-73208740 | Msa0091090:intron | 30.0% |
! | ATTTTACCGTTTGAGAGTTT+TGG | + | chr1_2:73209077-73209096 | None:intergenic | 30.0% |
CTGATAGTTGTCATGAATAA+GGG | - | chr1_2:73209207-73209226 | Msa0091090:intron | 30.0% | |
TGATAGTTGTCATGAATAAG+GGG | - | chr1_2:73209208-73209227 | Msa0091090:intron | 30.0% | |
AGTTAAGTTTCAAACTCCAA+TGG | + | chr1_2:73209287-73209306 | None:intergenic | 30.0% | |
ATGTCATGTCCAATTTCTAA+TGG | - | chr1_2:73209704-73209723 | Msa0091090:intron | 30.0% | |
CAATGGGAAACACAAAAATA+TGG | + | chr1_2:73209752-73209771 | None:intergenic | 30.0% | |
! | ATTTTTGTGTTTCCCATTGT+TGG | - | chr1_2:73209753-73209772 | Msa0091090:intron | 30.0% |
!!! | AGTTTTAAGTATAAAGGTCC+TGG | - | chr1_2:73209857-73209876 | Msa0091090:CDS | 30.0% |
AAAATATATGCTCCATAAGC+TGG | + | chr1_2:73209964-73209983 | None:intergenic | 30.0% | |
ATTCCTTATATGATGATCAG+AGG | + | chr1_2:73209990-73210009 | None:intergenic | 30.0% | |
!!! | TTGTGTTGGGATATTTTTAG+AGG | - | chr1_2:73208193-73208212 | Msa0091090:three_prime_UTR | 30.0% |
!!! | ATATTTTTAGAGGTGAAGAG+AGG | - | chr1_2:73208203-73208222 | Msa0091090:three_prime_UTR | 30.0% |
ATGATGTTCTTGTTGAAGAA+GGG | + | chr1_2:73208328-73208347 | None:intergenic | 30.0% | |
ATTACATACATTGGAAAGAG+GGG | + | chr1_2:73208609-73208628 | None:intergenic | 30.0% | |
CATTACATACATTGGAAAGA+GGG | + | chr1_2:73208610-73208629 | None:intergenic | 30.0% | |
ACATTACATACATTGGAAAG+AGG | + | chr1_2:73208611-73208630 | None:intergenic | 30.0% | |
GAGAGAAACATTACATACAT+TGG | + | chr1_2:73208618-73208637 | None:intergenic | 30.0% | |
! | TGATTATAATTTGTGGGATC+AGG | - | chr1_2:73208721-73208740 | Msa0091090:intron | 30.0% |
! | ATTTTACCGTTTGAGAGTTT+TGG | + | chr1_2:73209077-73209096 | None:intergenic | 30.0% |
CTGATAGTTGTCATGAATAA+GGG | - | chr1_2:73209207-73209226 | Msa0091090:intron | 30.0% | |
TGATAGTTGTCATGAATAAG+GGG | - | chr1_2:73209208-73209227 | Msa0091090:intron | 30.0% | |
AGTTAAGTTTCAAACTCCAA+TGG | + | chr1_2:73209287-73209306 | None:intergenic | 30.0% | |
ATGTCATGTCCAATTTCTAA+TGG | - | chr1_2:73209704-73209723 | Msa0091090:intron | 30.0% | |
CAATGGGAAACACAAAAATA+TGG | + | chr1_2:73209752-73209771 | None:intergenic | 30.0% | |
! | ATTTTTGTGTTTCCCATTGT+TGG | - | chr1_2:73209753-73209772 | Msa0091090:intron | 30.0% |
!!! | AGTTTTAAGTATAAAGGTCC+TGG | - | chr1_2:73209857-73209876 | Msa0091090:CDS | 30.0% |
AAAATATATGCTCCATAAGC+TGG | + | chr1_2:73209964-73209983 | None:intergenic | 30.0% | |
ATTCCTTATATGATGATCAG+AGG | + | chr1_2:73209990-73210009 | None:intergenic | 30.0% | |
! | GAGAATCAATCTGATGATGA+TGG | - | chr1_2:73208247-73208266 | Msa0091090:three_prime_UTR | 35.0% |
GATGATGTTCTTGTTGAAGA+AGG | + | chr1_2:73208329-73208348 | None:intergenic | 35.0% | |
! | ACGAAAGTGAAAGGTTTTCT+TGG | + | chr1_2:73208378-73208397 | None:intergenic | 35.0% |
GATTGATCGAGAAGAGAATA+CGG | + | chr1_2:73208419-73208438 | None:intergenic | 35.0% | |
!! | TTTTTCATTTCAGGTGACGA+TGG | - | chr1_2:73208491-73208510 | Msa0091090:CDS | 35.0% |
AAATATTGTCAGTCCCAGAT+TGG | + | chr1_2:73208847-73208866 | None:intergenic | 35.0% | |
ACAATATTTCCACTTTCCCA+TGG | - | chr1_2:73208858-73208877 | Msa0091090:intron | 35.0% | |
ATTTAGTGAAGAGTGACCAT+GGG | + | chr1_2:73208877-73208896 | None:intergenic | 35.0% | |
! | GCTTTTACTTGTACCATTTG+TGG | - | chr1_2:73208920-73208939 | Msa0091090:intron | 35.0% |
TGCAACATTCGTAACAAGTT+TGG | + | chr1_2:73209044-73209063 | None:intergenic | 35.0% | |
ATCTGACCAAAACTCTCAAA+CGG | - | chr1_2:73209068-73209087 | Msa0091090:intron | 35.0% | |
GCTGATAGTTGTCATGAATA+AGG | - | chr1_2:73209206-73209225 | Msa0091090:intron | 35.0% | |
TGGAATAACAAGCTAACCAT+TGG | - | chr1_2:73209268-73209287 | Msa0091090:intron | 35.0% | |
ATCAGCTTTCCTAATTCTCA+GGG | + | chr1_2:73209360-73209379 | None:intergenic | 35.0% | |
TATCAGCTTTCCTAATTCTC+AGG | + | chr1_2:73209361-73209380 | None:intergenic | 35.0% | |
TGAGAATTAGGAAAGCTGAT+AGG | - | chr1_2:73209360-73209379 | Msa0091090:intron | 35.0% | |
! | GTTTTTAAATTCAACCGGCA+GGG | + | chr1_2:73209583-73209602 | None:intergenic | 35.0% |
CATCAGTCTCCATTAGAAAT+TGG | + | chr1_2:73209716-73209735 | None:intergenic | 35.0% | |
CAATTTCTAATGGAGACTGA+TGG | - | chr1_2:73209714-73209733 | Msa0091090:intron | 35.0% | |
TTAAGTATAAAGGTCCTGGA+TGG | - | chr1_2:73209861-73209880 | Msa0091090:CDS | 35.0% | |
TAAGTATAAAGGTCCTGGAT+GGG | - | chr1_2:73209862-73209881 | Msa0091090:CDS | 35.0% | |
! | GAGAATCAATCTGATGATGA+TGG | - | chr1_2:73208247-73208266 | Msa0091090:three_prime_UTR | 35.0% |
GATGATGTTCTTGTTGAAGA+AGG | + | chr1_2:73208329-73208348 | None:intergenic | 35.0% | |
! | ACGAAAGTGAAAGGTTTTCT+TGG | + | chr1_2:73208378-73208397 | None:intergenic | 35.0% |
GATTGATCGAGAAGAGAATA+CGG | + | chr1_2:73208419-73208438 | None:intergenic | 35.0% | |
!! | TTTTTCATTTCAGGTGACGA+TGG | - | chr1_2:73208491-73208510 | Msa0091090:CDS | 35.0% |
AAATATTGTCAGTCCCAGAT+TGG | + | chr1_2:73208847-73208866 | None:intergenic | 35.0% | |
ACAATATTTCCACTTTCCCA+TGG | - | chr1_2:73208858-73208877 | Msa0091090:intron | 35.0% | |
ATTTAGTGAAGAGTGACCAT+GGG | + | chr1_2:73208877-73208896 | None:intergenic | 35.0% | |
! | GCTTTTACTTGTACCATTTG+TGG | - | chr1_2:73208920-73208939 | Msa0091090:intron | 35.0% |
TGCAACATTCGTAACAAGTT+TGG | + | chr1_2:73209044-73209063 | None:intergenic | 35.0% | |
ATCTGACCAAAACTCTCAAA+CGG | - | chr1_2:73209068-73209087 | Msa0091090:intron | 35.0% | |
GCTGATAGTTGTCATGAATA+AGG | - | chr1_2:73209206-73209225 | Msa0091090:intron | 35.0% | |
TGGAATAACAAGCTAACCAT+TGG | - | chr1_2:73209268-73209287 | Msa0091090:intron | 35.0% | |
ATCAGCTTTCCTAATTCTCA+GGG | + | chr1_2:73209360-73209379 | None:intergenic | 35.0% | |
TATCAGCTTTCCTAATTCTC+AGG | + | chr1_2:73209361-73209380 | None:intergenic | 35.0% | |
TGAGAATTAGGAAAGCTGAT+AGG | - | chr1_2:73209360-73209379 | Msa0091090:intron | 35.0% | |
! | GTTTTTAAATTCAACCGGCA+GGG | + | chr1_2:73209583-73209602 | None:intergenic | 35.0% |
CATCAGTCTCCATTAGAAAT+TGG | + | chr1_2:73209716-73209735 | None:intergenic | 35.0% | |
CAATTTCTAATGGAGACTGA+TGG | - | chr1_2:73209714-73209733 | Msa0091090:intron | 35.0% | |
TTAAGTATAAAGGTCCTGGA+TGG | - | chr1_2:73209861-73209880 | Msa0091090:CDS | 35.0% | |
TAAGTATAAAGGTCCTGGAT+GGG | - | chr1_2:73209862-73209881 | Msa0091090:CDS | 35.0% | |
!! | TTTTTAGAGGTGAAGAGAGG+AGG | - | chr1_2:73208206-73208225 | Msa0091090:three_prime_UTR | 40.0% |
TCTTGTTGAAGAAGGGAAGA+TGG | + | chr1_2:73208321-73208340 | None:intergenic | 40.0% | |
AAGGTTGAAGTTGAGTTCGT+TGG | + | chr1_2:73208552-73208571 | None:intergenic | 40.0% | |
AATGGAGAAACAGCGATTAG+CGG | + | chr1_2:73208585-73208604 | None:intergenic | 40.0% | |
TACATTGGAAAGAGGGGAAA+TGG | + | chr1_2:73208603-73208622 | None:intergenic | 40.0% | |
! | TAATTTGTGGGATCAGGATG+CGG | - | chr1_2:73208727-73208746 | Msa0091090:intron | 40.0% |
GATTTAGTGAAGAGTGACCA+TGG | + | chr1_2:73208878-73208897 | None:intergenic | 40.0% | |
AATCCTCATGCTTACACTGA+TGG | - | chr1_2:73208965-73208984 | Msa0091090:intron | 40.0% | |
!!! | TGATGGCACTGTTTTTGTTC+AGG | - | chr1_2:73208982-73209001 | Msa0091090:intron | 40.0% |
! | TGTCATGGATTGCATAAGAC+AGG | - | chr1_2:73209156-73209175 | Msa0091090:intron | 40.0% |
ACTCGAAGTCTAGCATCATA+TGG | + | chr1_2:73209334-73209353 | None:intergenic | 40.0% | |
TATGATGCTAGACTTCGAGT+TGG | - | chr1_2:73209334-73209353 | Msa0091090:intron | 40.0% | |
AAAATGTACTTCAACCCTGC+CGG | - | chr1_2:73209566-73209585 | Msa0091090:CDS | 40.0% | |
! | GGTTTTTAAATTCAACCGGC+AGG | + | chr1_2:73209584-73209603 | None:intergenic | 40.0% |
AAAGACTGACGTCGATATTC+TGG | - | chr1_2:73209619-73209638 | Msa0091090:CDS | 40.0% | |
TTCACAACACTGCCAACAAT+GGG | + | chr1_2:73209768-73209787 | None:intergenic | 40.0% | |
ATTCACAACACTGCCAACAA+TGG | + | chr1_2:73209769-73209788 | None:intergenic | 40.0% | |
CAATGCGTATCATAAGCTTG+TGG | - | chr1_2:73209790-73209809 | Msa0091090:intron | 40.0% | |
! | GGATCACTTGAACTTGTTTC+AGG | - | chr1_2:73209811-73209830 | Msa0091090:intron | 40.0% |
! | TGATCTCAAGTTCAGGTTCA+TGG | - | chr1_2:73209886-73209905 | Msa0091090:CDS | 40.0% |
TGGCAATTCACTCATGTAAC+GGG | + | chr1_2:73209944-73209963 | None:intergenic | 40.0% | |
CTGGCAATTCACTCATGTAA+CGG | + | chr1_2:73209945-73209964 | None:intergenic | 40.0% | |
ATGAGTGAATTGCCAGCTTA+TGG | - | chr1_2:73209949-73209968 | Msa0091090:intron | 40.0% | |
CTGCCTCTGATCATCATATA+AGG | - | chr1_2:73209984-73210003 | Msa0091090:intron | 40.0% | |
CTTCTCTTCATCTTGTGAGA+TGG | - | chr1_2:73210195-73210214 | Msa0091090:five_prime_UTR | 40.0% | |
CTTCATCTTGTGAGATGGTT+AGG | - | chr1_2:73210200-73210219 | Msa0091090:five_prime_UTR | 40.0% | |
!! | TTTTTAGAGGTGAAGAGAGG+AGG | - | chr1_2:73208206-73208225 | Msa0091090:three_prime_UTR | 40.0% |
TCTTGTTGAAGAAGGGAAGA+TGG | + | chr1_2:73208321-73208340 | None:intergenic | 40.0% | |
AAGGTTGAAGTTGAGTTCGT+TGG | + | chr1_2:73208552-73208571 | None:intergenic | 40.0% | |
AATGGAGAAACAGCGATTAG+CGG | + | chr1_2:73208585-73208604 | None:intergenic | 40.0% | |
TACATTGGAAAGAGGGGAAA+TGG | + | chr1_2:73208603-73208622 | None:intergenic | 40.0% | |
! | TAATTTGTGGGATCAGGATG+CGG | - | chr1_2:73208727-73208746 | Msa0091090:intron | 40.0% |
GATTTAGTGAAGAGTGACCA+TGG | + | chr1_2:73208878-73208897 | None:intergenic | 40.0% | |
AATCCTCATGCTTACACTGA+TGG | - | chr1_2:73208965-73208984 | Msa0091090:intron | 40.0% | |
!!! | TGATGGCACTGTTTTTGTTC+AGG | - | chr1_2:73208982-73209001 | Msa0091090:intron | 40.0% |
! | TGTCATGGATTGCATAAGAC+AGG | - | chr1_2:73209156-73209175 | Msa0091090:intron | 40.0% |
ACTCGAAGTCTAGCATCATA+TGG | + | chr1_2:73209334-73209353 | None:intergenic | 40.0% | |
TATGATGCTAGACTTCGAGT+TGG | - | chr1_2:73209334-73209353 | Msa0091090:intron | 40.0% | |
AAAATGTACTTCAACCCTGC+CGG | - | chr1_2:73209566-73209585 | Msa0091090:CDS | 40.0% | |
! | GGTTTTTAAATTCAACCGGC+AGG | + | chr1_2:73209584-73209603 | None:intergenic | 40.0% |
AAAGACTGACGTCGATATTC+TGG | - | chr1_2:73209619-73209638 | Msa0091090:CDS | 40.0% | |
TTCACAACACTGCCAACAAT+GGG | + | chr1_2:73209768-73209787 | None:intergenic | 40.0% | |
ATTCACAACACTGCCAACAA+TGG | + | chr1_2:73209769-73209788 | None:intergenic | 40.0% | |
CAATGCGTATCATAAGCTTG+TGG | - | chr1_2:73209790-73209809 | Msa0091090:intron | 40.0% | |
! | GGATCACTTGAACTTGTTTC+AGG | - | chr1_2:73209811-73209830 | Msa0091090:intron | 40.0% |
! | TGATCTCAAGTTCAGGTTCA+TGG | - | chr1_2:73209886-73209905 | Msa0091090:CDS | 40.0% |
TGGCAATTCACTCATGTAAC+GGG | + | chr1_2:73209944-73209963 | None:intergenic | 40.0% | |
CTGGCAATTCACTCATGTAA+CGG | + | chr1_2:73209945-73209964 | None:intergenic | 40.0% | |
ATGAGTGAATTGCCAGCTTA+TGG | - | chr1_2:73209949-73209968 | Msa0091090:intron | 40.0% | |
CTGCCTCTGATCATCATATA+AGG | - | chr1_2:73209984-73210003 | Msa0091090:intron | 40.0% | |
CTTCTCTTCATCTTGTGAGA+TGG | - | chr1_2:73210195-73210214 | Msa0091090:five_prime_UTR | 40.0% | |
CTTCATCTTGTGAGATGGTT+AGG | - | chr1_2:73210200-73210219 | Msa0091090:five_prime_UTR | 40.0% | |
GAAGGGAAGATGGAGAAAGA+AGG | + | chr1_2:73208311-73208330 | None:intergenic | 45.0% | |
AGAGGGTAGACGAAAGTGAA+AGG | + | chr1_2:73208387-73208406 | None:intergenic | 45.0% | |
GAATACGGACGCTTAGAAGA+GGG | + | chr1_2:73208404-73208423 | None:intergenic | 45.0% | |
AGAATACGGACGCTTAGAAG+AGG | + | chr1_2:73208405-73208424 | None:intergenic | 45.0% | |
ATGGAGAAACAGCGATTAGC+GGG | + | chr1_2:73208584-73208603 | None:intergenic | 45.0% | |
CACTCTTCACTAAATCTCCC+AGG | - | chr1_2:73208882-73208901 | Msa0091090:intron | 45.0% | |
GAACCAAACTTTGAGCAGCT+CGG | + | chr1_2:73209120-73209139 | None:intergenic | 45.0% | |
GTCATGAATAAGGGGCAATC+CGG | - | chr1_2:73209216-73209235 | Msa0091090:intron | 45.0% | |
!!! | GTCTTTTAAGAGCGGGTTGA+AGG | + | chr1_2:73209605-73209624 | None:intergenic | 45.0% |
!! | GACGTCAGTCTTTTAAGAGC+GGG | + | chr1_2:73209612-73209631 | None:intergenic | 45.0% |
!! | CGACGTCAGTCTTTTAAGAG+CGG | + | chr1_2:73209613-73209632 | None:intergenic | 45.0% |
AACTTGAGATCATCCCATCC+AGG | + | chr1_2:73209878-73209897 | None:intergenic | 45.0% | |
GATGGGATGATCTCAAGTTC+AGG | - | chr1_2:73209879-73209898 | Msa0091090:CDS | 45.0% | |
GGCAATTCACTCATGTAACG+GGG | + | chr1_2:73209943-73209962 | None:intergenic | 45.0% | |
GAAGGGAAGATGGAGAAAGA+AGG | + | chr1_2:73208311-73208330 | None:intergenic | 45.0% | |
AGAGGGTAGACGAAAGTGAA+AGG | + | chr1_2:73208387-73208406 | None:intergenic | 45.0% | |
GAATACGGACGCTTAGAAGA+GGG | + | chr1_2:73208404-73208423 | None:intergenic | 45.0% | |
AGAATACGGACGCTTAGAAG+AGG | + | chr1_2:73208405-73208424 | None:intergenic | 45.0% | |
ATGGAGAAACAGCGATTAGC+GGG | + | chr1_2:73208584-73208603 | None:intergenic | 45.0% | |
CACTCTTCACTAAATCTCCC+AGG | - | chr1_2:73208882-73208901 | Msa0091090:intron | 45.0% | |
GAACCAAACTTTGAGCAGCT+CGG | + | chr1_2:73209120-73209139 | None:intergenic | 45.0% | |
GTCATGAATAAGGGGCAATC+CGG | - | chr1_2:73209216-73209235 | Msa0091090:intron | 45.0% | |
!!! | GTCTTTTAAGAGCGGGTTGA+AGG | + | chr1_2:73209605-73209624 | None:intergenic | 45.0% |
!! | GACGTCAGTCTTTTAAGAGC+GGG | + | chr1_2:73209612-73209631 | None:intergenic | 45.0% |
!! | CGACGTCAGTCTTTTAAGAG+CGG | + | chr1_2:73209613-73209632 | None:intergenic | 45.0% |
AACTTGAGATCATCCCATCC+AGG | + | chr1_2:73209878-73209897 | None:intergenic | 45.0% | |
GATGGGATGATCTCAAGTTC+AGG | - | chr1_2:73209879-73209898 | Msa0091090:CDS | 45.0% | |
GGCAATTCACTCATGTAACG+GGG | + | chr1_2:73209943-73209962 | None:intergenic | 45.0% | |
!!! | AAAATTTTTTTTTTTTTTGA+AGG | - | chr1_2:73209415-73209434 | Msa0091090:intron | 5.0% |
!!! | AAAATTTTTTTTTTTTTTGA+AGG | - | chr1_2:73209415-73209434 | Msa0091090:intron | 5.0% |
GATTAGCGGGAACTGGAGAA+AGG | + | chr1_2:73208571-73208590 | None:intergenic | 50.0% | |
AAACAGCGATTAGCGGGAAC+TGG | + | chr1_2:73208578-73208597 | None:intergenic | 50.0% | |
TTGAGTGCAGCAACAGGTAG+AGG | - | chr1_2:73208764-73208783 | Msa0091090:intron | 50.0% | |
ACAGGTAGAGGATGGACAAC+AGG | - | chr1_2:73208776-73208795 | Msa0091090:intron | 50.0% | |
AGAGGATGGACAACAGGTTC+TGG | - | chr1_2:73208782-73208801 | Msa0091090:intron | 50.0% | |
GAGGATGGACAACAGGTTCT+GGG | - | chr1_2:73208783-73208802 | Msa0091090:intron | 50.0% | |
!! | ATGGACAACAGGTTCTGGGA+TGG | - | chr1_2:73208787-73208806 | Msa0091090:intron | 50.0% |
!! | ACAACAGGTTCTGGGATGGA+AGG | - | chr1_2:73208791-73208810 | Msa0091090:intron | 50.0% |
TTGGCAAGGATGGCCAATCT+GGG | - | chr1_2:73208831-73208850 | Msa0091090:intron | 50.0% | |
GAAGAGTGACCATGGGAAAG+TGG | + | chr1_2:73208870-73208889 | None:intergenic | 50.0% | |
TCACTAAATCTCCCAGGCGA+AGG | - | chr1_2:73208888-73208907 | Msa0091090:intron | 50.0% | |
AGTAGTTCGCTGGCCACAAA+TGG | + | chr1_2:73208936-73208955 | None:intergenic | 50.0% | |
TAATAGCGCGAGTAGTTCGC+TGG | + | chr1_2:73208946-73208965 | None:intergenic | 50.0% | |
GTGCCATCAGTGTAAGCATG+AGG | + | chr1_2:73208971-73208990 | None:intergenic | 50.0% | |
TAGCCGAGCTGCTCAAAGTT+TGG | - | chr1_2:73209114-73209133 | Msa0091090:intron | 50.0% | |
!! | TCGAGTTGGCCCTGAGAATT+AGG | - | chr1_2:73209348-73209367 | Msa0091090:intron | 50.0% |
GATTAGCGGGAACTGGAGAA+AGG | + | chr1_2:73208571-73208590 | None:intergenic | 50.0% | |
AAACAGCGATTAGCGGGAAC+TGG | + | chr1_2:73208578-73208597 | None:intergenic | 50.0% | |
TTGAGTGCAGCAACAGGTAG+AGG | - | chr1_2:73208764-73208783 | Msa0091090:intron | 50.0% | |
ACAGGTAGAGGATGGACAAC+AGG | - | chr1_2:73208776-73208795 | Msa0091090:intron | 50.0% | |
AGAGGATGGACAACAGGTTC+TGG | - | chr1_2:73208782-73208801 | Msa0091090:intron | 50.0% | |
GAGGATGGACAACAGGTTCT+GGG | - | chr1_2:73208783-73208802 | Msa0091090:intron | 50.0% | |
!! | ATGGACAACAGGTTCTGGGA+TGG | - | chr1_2:73208787-73208806 | Msa0091090:intron | 50.0% |
!! | ACAACAGGTTCTGGGATGGA+AGG | - | chr1_2:73208791-73208810 | Msa0091090:intron | 50.0% |
TTGGCAAGGATGGCCAATCT+GGG | - | chr1_2:73208831-73208850 | Msa0091090:intron | 50.0% | |
GAAGAGTGACCATGGGAAAG+TGG | + | chr1_2:73208870-73208889 | None:intergenic | 50.0% | |
TCACTAAATCTCCCAGGCGA+AGG | - | chr1_2:73208888-73208907 | Msa0091090:intron | 50.0% | |
AGTAGTTCGCTGGCCACAAA+TGG | + | chr1_2:73208936-73208955 | None:intergenic | 50.0% | |
TAATAGCGCGAGTAGTTCGC+TGG | + | chr1_2:73208946-73208965 | None:intergenic | 50.0% | |
GTGCCATCAGTGTAAGCATG+AGG | + | chr1_2:73208971-73208990 | None:intergenic | 50.0% | |
TAGCCGAGCTGCTCAAAGTT+TGG | - | chr1_2:73209114-73209133 | Msa0091090:intron | 50.0% | |
!! | TCGAGTTGGCCCTGAGAATT+AGG | - | chr1_2:73209348-73209367 | Msa0091090:intron | 50.0% |
! | CTGGTGTTGAGTGCAGCAAC+AGG | - | chr1_2:73208758-73208777 | Msa0091090:intron | 55.0% |
GTGCAGCAACAGGTAGAGGA+TGG | - | chr1_2:73208768-73208787 | Msa0091090:intron | 55.0% | |
TTGCCAACAGCAGGAACAGG+GGG | + | chr1_2:73208818-73208837 | None:intergenic | 55.0% | |
CTTGCCAACAGCAGGAACAG+GGG | + | chr1_2:73208819-73208838 | None:intergenic | 55.0% | |
CCTTGCCAACAGCAGGAACA+GGG | + | chr1_2:73208820-73208839 | None:intergenic | 55.0% | |
TCCTTGCCAACAGCAGGAAC+AGG | + | chr1_2:73208821-73208840 | None:intergenic | 55.0% | |
GTTCCTGCTGTTGGCAAGGA+TGG | - | chr1_2:73208821-73208840 | Msa0091090:intron | 55.0% | |
GTTGGCAAGGATGGCCAATC+TGG | - | chr1_2:73208830-73208849 | Msa0091090:intron | 55.0% | |
! | CTGGTGTTGAGTGCAGCAAC+AGG | - | chr1_2:73208758-73208777 | Msa0091090:intron | 55.0% |
GTGCAGCAACAGGTAGAGGA+TGG | - | chr1_2:73208768-73208787 | Msa0091090:intron | 55.0% | |
TTGCCAACAGCAGGAACAGG+GGG | + | chr1_2:73208818-73208837 | None:intergenic | 55.0% | |
CTTGCCAACAGCAGGAACAG+GGG | + | chr1_2:73208819-73208838 | None:intergenic | 55.0% | |
CCTTGCCAACAGCAGGAACA+GGG | + | chr1_2:73208820-73208839 | None:intergenic | 55.0% | |
TCCTTGCCAACAGCAGGAAC+AGG | + | chr1_2:73208821-73208840 | None:intergenic | 55.0% | |
GTTCCTGCTGTTGGCAAGGA+TGG | - | chr1_2:73208821-73208840 | Msa0091090:intron | 55.0% | |
GTTGGCAAGGATGGCCAATC+TGG | - | chr1_2:73208830-73208849 | Msa0091090:intron | 55.0% | |
TGGGATCAGGATGCGGCGAT+GGG | - | chr1_2:73208734-73208753 | Msa0091090:intron | 60.0% | |
CCCTGTTCCTGCTGTTGGCA+AGG | - | chr1_2:73208817-73208836 | Msa0091090:intron | 60.0% | |
TGGCCATCCTTGCCAACAGC+AGG | + | chr1_2:73208827-73208846 | None:intergenic | 60.0% | |
GCGATGAGCATCCTTCGCCT+GGG | + | chr1_2:73208902-73208921 | None:intergenic | 60.0% | |
AGCGATGAGCATCCTTCGCC+TGG | + | chr1_2:73208903-73208922 | None:intergenic | 60.0% | |
TGGGATCAGGATGCGGCGAT+GGG | - | chr1_2:73208734-73208753 | Msa0091090:intron | 60.0% | |
CCCTGTTCCTGCTGTTGGCA+AGG | - | chr1_2:73208817-73208836 | Msa0091090:intron | 60.0% | |
TGGCCATCCTTGCCAACAGC+AGG | + | chr1_2:73208827-73208846 | None:intergenic | 60.0% | |
GCGATGAGCATCCTTCGCCT+GGG | + | chr1_2:73208902-73208921 | None:intergenic | 60.0% | |
AGCGATGAGCATCCTTCGCC+TGG | + | chr1_2:73208903-73208922 | None:intergenic | 60.0% | |
GTGGGATCAGGATGCGGCGA+TGG | - | chr1_2:73208733-73208752 | Msa0091090:intron | 65.0% | |
TCAGGATGCGGCGATGGGAC+TGG | - | chr1_2:73208739-73208758 | Msa0091090:intron | 65.0% | |
GGTCCCCCTGTTCCTGCTGT+TGG | - | chr1_2:73208812-73208831 | Msa0091090:intron | 65.0% | |
GTGGGATCAGGATGCGGCGA+TGG | - | chr1_2:73208733-73208752 | Msa0091090:intron | 65.0% | |
TCAGGATGCGGCGATGGGAC+TGG | - | chr1_2:73208739-73208758 | Msa0091090:intron | 65.0% | |
GGTCCCCCTGTTCCTGCTGT+TGG | - | chr1_2:73208812-73208831 | Msa0091090:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 73208191 | 73210247 | 73208191 | ID=Msa0091090;Name=Msa0091090 |
chr1_2 | mRNA | 73208191 | 73210247 | 73208191 | ID=Msa0091090-mRNA-1;Parent=Msa0091090;Name=Msa0091090-mRNA-1;_AED=0.10;_eAED=0.10;_QI=69|1|1|1|1|1|4|295|234 |
chr1_2 | exon | 73208191 | 73208659 | 73208191 | ID=Msa0091090-mRNA-1:exon:25560;Parent=Msa0091090-mRNA-1 |
chr1_2 | exon | 73209435 | 73209695 | 73209435 | ID=Msa0091090-mRNA-1:exon:25559;Parent=Msa0091090-mRNA-1 |
chr1_2 | exon | 73209819 | 73209934 | 73209819 | ID=Msa0091090-mRNA-1:exon:25558;Parent=Msa0091090-mRNA-1 |
chr1_2 | exon | 73210025 | 73210247 | 73210025 | ID=Msa0091090-mRNA-1:exon:25557;Parent=Msa0091090-mRNA-1 |
chr1_2 | five_prime_UTR | 73210179 | 73210247 | 73210179 | ID=Msa0091090-mRNA-1:five_prime_utr;Parent=Msa0091090-mRNA-1 |
chr1_2 | CDS | 73210025 | 73210178 | 73210025 | ID=Msa0091090-mRNA-1:cds;Parent=Msa0091090-mRNA-1 |
chr1_2 | CDS | 73209819 | 73209934 | 73209819 | ID=Msa0091090-mRNA-1:cds;Parent=Msa0091090-mRNA-1 |
chr1_2 | CDS | 73209435 | 73209695 | 73209435 | ID=Msa0091090-mRNA-1:cds;Parent=Msa0091090-mRNA-1 |
chr1_2 | CDS | 73208486 | 73208659 | 73208486 | ID=Msa0091090-mRNA-1:cds;Parent=Msa0091090-mRNA-1 |
chr1_2 | three_prime_UTR | 73208191 | 73208485 | 73208191 | ID=Msa0091090-mRNA-1:three_prime_utr;Parent=Msa0091090-mRNA-1 |
Gene Sequence |
Protein sequence |