AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064328


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064328.t1 MTR_6g087980 99.522 209 1 0 1 209 1 209 5.22e-157 432
MS.gene064328.t1 MTR_3g078260 76.471 204 45 2 2 205 4 204 3.93e-117 332
MS.gene064328.t1 MTR_4g073250 75.000 200 47 1 1 200 1 197 2.65e-113 322
MS.gene064328.t1 MTR_2g090875 81.461 178 33 0 1 178 1 178 1.20e-109 312
MS.gene064328.t1 MTR_8g075240 79.775 178 36 0 1 178 1 178 2.21e-106 304
MS.gene064328.t1 MTR_4g088055 78.652 178 38 0 1 178 1 178 6.81e-106 303
MS.gene064328.t1 MTR_5g022600 79.213 178 37 0 1 178 1 178 9.25e-105 300
MS.gene064328.t1 MTR_3g078260 87.395 119 15 0 2 120 4 122 2.67e-76 226
MS.gene064328.t1 MTR_3g096350 32.584 178 105 5 7 181 13 178 4.85e-27 102
MS.gene064328.t1 MTR_7g103070 32.967 182 107 5 8 185 18 188 6.05e-26 100
MS.gene064328.t1 MTR_8g093740 32.402 179 106 5 6 181 13 179 3.41e-25 97.8
MS.gene064328.t1 MTR_6g021790 32.597 181 108 5 1 179 1 169 3.81e-25 97.8
MS.gene064328.t1 MTR_2g027660 32.558 172 102 5 1 170 1 160 4.05e-24 95.1
MS.gene064328.t1 MTR_1g115325 31.737 167 101 5 6 170 15 170 1.03e-23 94.4
MS.gene064328.t1 MTR_1g068740 31.737 167 101 5 6 170 15 170 1.56e-23 94.0
MS.gene064328.t1 MTR_1g094220 32.203 177 105 6 7 180 32 196 2.28e-23 92.8
MS.gene064328.t1 MTR_1g068730 31.737 167 101 5 6 170 15 170 2.42e-23 93.2
MS.gene064328.t1 MTR_8g006970 32.335 167 99 5 6 170 8 162 4.77e-23 91.7
MS.gene064328.t1 MTR_8g006970 31.220 205 116 8 6 197 22 214 7.33e-23 92.0
MS.gene064328.t1 MTR_7g100020 31.138 167 102 5 6 170 15 170 9.64e-23 91.7
MS.gene064328.t1 MTR_1g029450 30.726 179 109 5 6 181 17 183 9.95e-23 91.7
MS.gene064328.t1 MTR_1g094220 32.164 171 101 6 7 174 32 190 1.16e-22 91.3
MS.gene064328.t1 MTR_1g094220 32.164 171 101 6 7 174 32 190 1.40e-22 90.9
MS.gene064328.t1 MTR_2g101890 31.250 208 119 7 6 198 10 208 4.30e-22 89.7
MS.gene064328.t1 MTR_1g094220 32.353 170 100 6 7 173 32 189 4.59e-22 90.5
MS.gene064328.t1 MTR_8g103550 32.222 180 107 6 8 184 11 178 6.79e-22 89.0
MS.gene064328.t1 MTR_1g090717 30.244 205 117 8 8 197 17 210 8.00e-22 89.4
MS.gene064328.t1 MTR_1g062760 31.319 182 109 6 8 185 16 185 8.53e-22 89.0
MS.gene064328.t1 MTR_1g097420 29.327 208 123 6 6 198 8 206 1.34e-21 88.6
MS.gene064328.t1 MTR_4g063160 31.953 169 100 6 6 170 15 172 1.38e-21 88.6
MS.gene064328.t1 MTR_7g081700 31.138 167 101 5 6 170 8 162 1.62e-21 88.2
MS.gene064328.t1 MTR_8g031660 31.395 172 104 5 1 170 1 160 1.92e-21 88.2
MS.gene064328.t1 MTR_4g098950 33.939 165 95 5 8 170 11 163 3.45e-21 87.4
MS.gene064328.t1 MTR_8g031870 29.651 172 107 5 1 170 1 160 3.72e-21 87.0
MS.gene064328.t1 MTR_3g069510 31.551 187 114 5 6 190 12 186 5.64e-21 87.0
MS.gene064328.t1 MTR_8g090215 35.152 165 93 5 8 170 11 163 6.91e-21 86.7
MS.gene064328.t1 MTR_8g031830 30.409 171 105 5 1 169 1 159 7.13e-21 86.3
MS.gene064328.t1 MTR_4g012940 30.769 208 120 7 6 198 8 206 1.14e-20 85.9
MS.gene064328.t1 MTR_8g031680 29.651 172 107 5 1 170 1 160 1.76e-20 85.5
MS.gene064328.t1 MTR_4g069850 29.612 206 122 5 6 197 8 204 2.65e-20 85.1
MS.gene064328.t1 MTR_4g064897 29.293 198 123 6 6 201 12 194 3.76e-20 84.7
MS.gene064328.t1 MTR_5g013900 33.939 165 95 5 8 170 11 163 4.20e-20 84.7
MS.gene064328.t1 MTR_2g005500 28.814 177 109 6 1 172 1 165 4.98e-20 84.3
MS.gene064328.t1 MTR_2g096550 28.947 190 120 6 6 191 15 193 5.32e-20 84.3
MS.gene064328.t1 MTR_3g087160 34.545 165 94 5 8 170 11 163 5.47e-20 84.3
MS.gene064328.t1 MTR_2g083860 36.364 121 74 3 6 124 13 132 7.01e-20 84.3
MS.gene064328.t1 MTR_8g089985 29.412 187 118 5 8 192 19 193 7.84e-20 84.3
MS.gene064328.t1 MTR_4g079350 37.500 128 77 3 6 131 13 139 8.74e-20 84.0
MS.gene064328.t1 MTR_8g027220 38.971 136 73 5 8 134 28 162 1.34e-19 84.0
MS.gene064328.t1 MTR_3g086980 28.877 187 119 5 8 192 18 192 1.54e-19 83.6
MS.gene064328.t1 MTR_2g005510 30.435 184 114 5 6 187 15 186 2.71e-19 82.8
MS.gene064328.t1 MTR_4g088090 36.290 124 76 3 6 127 13 135 2.90e-19 82.4
MS.gene064328.t1 MTR_8g036220 30.526 190 118 5 6 193 16 193 2.94e-19 82.8
MS.gene064328.t1 MTR_1g068740 33.077 130 84 3 6 133 15 143 2.97e-19 82.0
MS.gene064328.t1 MTR_1g068730 34.146 123 78 3 6 126 15 136 3.11e-19 81.3
MS.gene064328.t1 MTR_2g075950 36.364 121 74 3 6 124 13 132 3.69e-19 82.4
MS.gene064328.t1 MTR_2g014990 30.270 185 113 6 6 187 13 184 4.79e-19 82.0
MS.gene064328.t1 MTR_7g117910 37.302 126 76 3 8 131 22 146 5.89e-19 81.6
MS.gene064328.t1 MTR_3g064390 31.138 167 97 5 8 170 12 164 1.23e-18 80.5
MS.gene064328.t1 MTR_5g076590 30.539 167 98 5 8 170 12 164 1.75e-18 80.1
MS.gene064328.t1 MTR_1g052475 37.607 117 70 3 8 122 17 132 3.33e-18 79.7
MS.gene064328.t1 MTR_8g092020 28.986 207 123 6 6 198 12 208 4.24e-18 79.3
MS.gene064328.t1 MTR_8g093740 32.117 137 80 3 47 181 21 146 4.47e-18 78.6
MS.gene064328.t1 MTR_1g097420 29.442 197 115 6 17 198 46 233 5.55e-18 79.3
MS.gene064328.t1 MTR_3g096350 33.898 118 74 3 7 121 13 129 7.84e-18 77.4
MS.gene064328.t1 MTR_3g096350 33.898 118 74 3 7 121 13 129 8.49e-18 77.0
MS.gene064328.t1 MTR_2g102060 29.697 165 102 5 8 170 12 164 1.03e-17 78.2
MS.gene064328.t1 MTR_8g107070 30.108 186 116 5 6 189 14 187 1.14e-17 79.3
MS.gene064328.t1 MTR_0262s0050 37.607 117 70 3 8 122 17 132 1.27e-17 78.2
MS.gene064328.t1 MTR_7g051940 29.834 181 113 5 6 184 13 181 1.66e-17 77.8
MS.gene064328.t1 MTR_1g078200 28.421 190 122 5 6 193 14 191 3.14e-17 77.4
MS.gene064328.t1 MTR_3g064390 34.959 123 73 4 8 126 12 131 3.61e-17 75.5
MS.gene064328.t1 MTR_6g079550 27.979 193 125 5 6 196 12 192 9.15e-17 75.9
MS.gene064328.t1 MTR_7g103070 31.387 137 81 3 47 181 2 127 9.39e-17 74.3
MS.gene064328.t1 MTR_7g405790 27.586 203 133 5 6 206 15 205 9.41e-17 75.9
MS.gene064328.t1 MTR_2g090865 35.537 121 75 3 6 124 11 130 3.41e-15 71.6
MS.gene064328.t1 MTR_4g099470 32.609 138 79 5 35 170 13 138 4.65e-15 70.5
MS.gene064328.t1 MTR_3g107717 33.051 118 77 2 7 123 14 130 6.32e-14 68.2
MS.gene064328.t1 MTR_3g107713 33.051 118 77 2 7 123 14 130 6.52e-14 68.2
MS.gene064328.t1 MTR_3g107707 33.051 118 77 2 7 123 14 130 6.86e-14 68.2
MS.gene064328.t1 MTR_6g039490 24.757 206 133 5 6 198 8 204 1.04e-13 67.8
MS.gene064328.t1 MTR_1g072280 27.684 177 118 4 5 180 11 178 4.55e-12 64.7
MS.gene064328.t1 MTR_7g094810 26.738 187 103 3 7 180 9 174 8.91e-12 63.9
MS.gene064328.t1 MTR_7g094810 26.738 187 103 3 7 180 9 174 9.15e-12 63.9
MS.gene064328.t1 MTR_7g094810 26.738 187 103 3 7 180 9 174 9.25e-12 63.5
MS.gene064328.t1 MTR_7g094810 26.738 187 103 3 7 180 9 174 1.06e-11 63.5
MS.gene064328.t1 MTR_7g094810 26.738 187 103 3 7 180 9 174 1.07e-11 63.5
MS.gene064328.t1 MTR_1g082870 27.011 174 119 3 7 180 17 182 7.33e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064328.t1 AT4G28950 91.429 210 15 2 1 209 1 208 2.30e-142 395
MS.gene064328.t1 AT3G48040 77.451 204 45 1 2 205 4 206 2.41e-114 325
MS.gene064328.t1 AT5G62880 82.682 179 31 0 2 180 4 182 1.01e-111 318
MS.gene064328.t1 AT4G35020 79.558 181 37 0 1 181 1 181 1.36e-109 312
MS.gene064328.t1 AT4G35020 79.558 181 37 0 1 181 1 181 1.36e-109 312
MS.gene064328.t1 AT4G35020 79.558 181 37 0 1 181 1 181 1.36e-109 312
MS.gene064328.t1 AT3G51300 80.337 178 35 0 1 178 1 178 1.11e-107 307
MS.gene064328.t1 AT1G75840 80.337 178 35 0 1 178 1 178 1.62e-106 304
MS.gene064328.t1 AT5G45970 78.212 179 39 0 1 179 1 179 2.00e-106 304
MS.gene064328.t1 AT1G20090 80.114 176 35 0 3 178 2 177 8.03e-106 303
MS.gene064328.t1 AT2G17800 79.213 178 37 0 1 178 1 178 1.24e-105 302
MS.gene064328.t1 AT2G17800 79.213 178 37 0 1 178 1 178 1.24e-105 302
MS.gene064328.t1 AT4G35950 78.090 178 39 0 1 178 1 178 2.28e-104 299
MS.gene064328.t1 AT5G62880 82.036 167 30 0 2 168 4 170 9.77e-103 295
MS.gene064328.t1 AT3G48040 83.436 163 27 0 2 164 4 166 2.49e-102 293
MS.gene064328.t1 AT2G44690 70.256 195 54 1 6 200 18 208 8.08e-99 285
MS.gene064328.t1 AT3G51290 79.310 145 30 0 34 178 635 779 5.85e-79 251
MS.gene064328.t1 AT4G35020 83.333 120 20 0 1 120 1 120 8.82e-74 220
MS.gene064328.t1 AT4G35020 83.333 120 20 0 1 120 1 120 8.82e-74 220
MS.gene064328.t1 AT4G35860 33.889 180 104 6 1 177 1 168 1.19e-26 102
MS.gene064328.t1 AT3G54840 33.898 177 102 6 7 180 34 198 2.57e-24 95.5
MS.gene064328.t1 AT4G17170 32.558 172 102 5 1 170 1 160 2.58e-24 95.9
MS.gene064328.t1 AT3G54840 34.524 168 95 6 7 171 34 189 3.82e-24 94.7
MS.gene064328.t1 AT3G54840 33.714 175 101 6 9 180 2 164 1.37e-23 92.8
MS.gene064328.t1 AT5G03530 30.097 206 116 8 8 197 15 208 1.71e-23 93.6
MS.gene064328.t1 AT5G03530 30.097 206 116 8 8 197 15 208 1.71e-23 93.6
MS.gene064328.t1 AT3G46060 31.737 167 101 5 6 170 15 170 1.95e-23 93.6
MS.gene064328.t1 AT3G46060 31.737 167 101 5 6 170 15 170 1.95e-23 93.6
MS.gene064328.t1 AT3G46060 31.737 167 101 5 6 170 15 170 1.95e-23 93.6
MS.gene064328.t1 AT5G45130 34.731 167 91 5 8 170 12 164 3.55e-23 92.4
MS.gene064328.t1 AT4G39890 35.542 166 92 5 8 170 11 164 3.79e-23 92.8
MS.gene064328.t1 AT5G59840 30.682 176 109 5 6 179 15 179 6.09e-23 92.4
MS.gene064328.t1 AT4G17160 30.814 172 105 5 1 170 1 160 1.14e-22 91.3
MS.gene064328.t1 AT1G73640 35.928 167 93 5 6 170 13 167 2.32e-22 91.3
MS.gene064328.t1 AT3G53610 30.114 176 110 5 6 179 15 179 2.47e-22 90.9
MS.gene064328.t1 AT3G53610 30.114 176 110 5 6 179 15 179 2.47e-22 90.9
MS.gene064328.t1 AT3G53610 30.114 176 110 5 6 179 15 179 2.47e-22 90.9
MS.gene064328.t1 AT1G02130 32.335 167 99 5 6 170 8 162 2.49e-22 90.5
MS.gene064328.t1 AT5G45130 34.545 165 90 5 10 170 22 172 3.25e-22 90.1
MS.gene064328.t1 AT1G22740 30.392 204 122 6 6 198 8 202 4.13e-22 89.7
MS.gene064328.t1 AT1G43890 29.050 179 112 5 6 181 13 179 4.19e-22 90.1
MS.gene064328.t1 AT1G43890 29.050 179 112 5 6 181 13 179 4.19e-22 90.1
MS.gene064328.t1 AT1G43890 29.050 179 112 5 6 181 13 179 4.19e-22 90.1
MS.gene064328.t1 AT3G18820 30.583 206 120 6 6 197 8 204 6.04e-22 89.4
MS.gene064328.t1 AT4G19640 33.533 167 93 5 8 170 12 164 9.78e-22 88.6
MS.gene064328.t1 AT4G17530 29.902 204 119 8 6 197 8 199 1.61e-21 88.2
MS.gene064328.t1 AT1G16920 38.843 121 71 3 6 124 13 132 2.37e-21 88.2
MS.gene064328.t1 AT5G47200 29.902 204 119 8 6 197 8 199 2.45e-21 87.8
MS.gene064328.t1 AT1G07410 31.551 187 114 6 6 190 12 186 2.66e-21 87.8
MS.gene064328.t1 AT1G18200 33.333 171 100 5 6 174 13 171 5.51e-21 87.4
MS.gene064328.t1 AT3G11730 30.178 169 104 5 6 172 8 164 7.40e-21 86.7
MS.gene064328.t1 AT5G59150 33.149 181 107 6 6 184 12 180 1.12e-20 86.3
MS.gene064328.t1 AT3G16100 31.401 207 119 7 6 198 8 205 1.22e-20 85.9
MS.gene064328.t1 AT2G22290 35.152 165 93 5 8 170 11 163 3.50e-20 84.7
MS.gene064328.t1 AT5G45750 28.638 213 129 6 6 207 13 213 5.16e-20 84.7
MS.gene064328.t1 AT5G64990 34.545 165 94 5 8 170 9 161 5.66e-20 84.3
MS.gene064328.t1 AT3G09900 31.818 176 107 5 6 179 15 179 6.15e-20 84.3
MS.gene064328.t1 AT4G18430 39.516 124 72 3 6 127 13 135 6.42e-20 84.3
MS.gene064328.t1 AT1G52280 30.097 206 121 7 6 197 8 204 6.56e-20 84.0
MS.gene064328.t1 AT5G03520 32.386 176 106 5 6 179 15 179 8.35e-20 84.0
MS.gene064328.t1 AT3G46830 29.834 181 113 5 6 184 12 180 9.35e-20 84.0
MS.gene064328.t1 AT3G46830 29.834 181 113 5 6 184 12 180 9.35e-20 84.0
MS.gene064328.t1 AT1G09630 31.522 184 112 5 6 187 12 183 1.16e-19 83.6
MS.gene064328.t1 AT3G15060 38.525 122 72 3 8 127 15 135 1.24e-19 83.6
MS.gene064328.t1 AT5G60860 29.891 184 115 4 6 187 13 184 1.53e-19 83.2
MS.gene064328.t1 AT2G44610 33.939 165 95 4 8 170 11 163 1.97e-19 82.8
MS.gene064328.t1 AT4G18800 29.348 184 116 5 6 187 13 184 2.53e-19 82.8
MS.gene064328.t1 AT5G65270 28.723 188 120 5 8 193 19 194 3.31e-19 82.8
MS.gene064328.t1 AT1G06400 36.364 121 74 3 6 124 13 132 3.56e-19 82.4
MS.gene064328.t1 AT4G19640 34.483 145 87 5 8 147 12 153 4.98e-19 81.3
MS.gene064328.t1 AT2G21880 30.270 185 114 5 6 184 9 184 6.10e-19 81.6
MS.gene064328.t1 AT5G10260 33.333 165 96 5 8 170 11 163 7.90e-19 81.3
MS.gene064328.t1 AT5G47520 28.000 200 130 5 2 199 10 197 7.94e-19 81.6
MS.gene064328.t1 AT4G19640 35.938 128 75 4 8 131 12 136 8.01e-19 79.7
MS.gene064328.t1 AT3G12160 38.462 117 69 3 8 122 17 132 1.28e-18 80.9
MS.gene064328.t1 AT1G28550 37.903 124 74 3 6 127 13 135 1.36e-18 80.9
MS.gene064328.t1 AT1G49300 29.126 206 123 6 6 197 8 204 1.49e-18 80.5
MS.gene064328.t1 AT1G49300 29.126 206 123 6 6 197 8 204 1.49e-18 80.5
MS.gene064328.t1 AT2G31680 30.055 183 114 5 6 186 12 182 1.69e-18 80.5
MS.gene064328.t1 AT4G39990 27.624 181 117 5 8 186 19 187 1.72e-18 80.9
MS.gene064328.t1 AT2G43130 29.508 183 115 5 6 186 12 182 2.48e-18 80.1
MS.gene064328.t1 AT2G33870 37.903 124 74 3 6 127 13 135 3.19e-18 79.7
MS.gene064328.t1 AT4G35860 34.586 133 73 5 47 177 2 122 4.25e-18 78.2
MS.gene064328.t1 AT4G09720 28.342 187 119 5 6 186 8 185 4.37e-18 79.3
MS.gene064328.t1 AT1G05810 29.508 183 115 5 6 186 12 182 5.58e-18 79.3
MS.gene064328.t1 AT4G09720 27.604 192 119 4 6 186 8 190 5.80e-18 79.0
MS.gene064328.t1 AT1G05810 29.508 183 115 5 6 186 58 228 8.07e-18 79.7
MS.gene064328.t1 AT5G64990 33.140 172 94 6 8 170 9 168 2.37e-17 77.4
MS.gene064328.t1 AT5G47960 35.897 117 72 3 8 122 17 132 3.69e-17 77.0
MS.gene064328.t1 AT4G09720 26.768 198 119 4 6 186 8 196 4.31e-17 76.6
MS.gene064328.t1 AT1G01200 37.607 117 70 3 8 122 30 145 6.59e-17 76.6
MS.gene064328.t1 AT3G07410 29.282 181 114 5 6 184 12 180 2.07e-16 75.1
MS.gene064328.t1 AT5G55080 30.909 165 99 5 7 170 14 164 3.43e-16 74.3
MS.gene064328.t1 AT5G27540 25.843 178 124 3 3 180 14 183 1.26e-15 75.1
MS.gene064328.t1 AT5G27540 25.843 178 124 3 3 180 14 183 1.26e-15 75.1
MS.gene064328.t1 AT3G09910 28.571 182 114 6 8 185 15 184 5.32e-15 70.9
MS.gene064328.t1 AT3G09910 28.571 182 114 6 8 185 15 184 5.32e-15 70.9
MS.gene064328.t1 AT3G09910 28.571 182 114 6 8 185 15 184 5.32e-15 70.9
MS.gene064328.t1 AT5G03520 32.090 134 79 4 47 179 47 169 2.03e-14 69.3
MS.gene064328.t1 AT3G09910 29.480 173 106 6 8 176 15 175 2.63e-14 68.9
MS.gene064328.t1 AT3G09910 29.480 173 106 6 8 176 15 175 2.63e-14 68.9
MS.gene064328.t1 AT5G59150 33.094 139 80 5 47 184 3 129 3.68e-14 67.8
MS.gene064328.t1 AT5G20020 33.051 118 77 2 7 123 14 130 4.15e-14 68.9
MS.gene064328.t1 AT5G55190 33.051 118 77 2 7 123 14 130 5.30e-14 68.6
MS.gene064328.t1 AT5G20010 33.051 118 77 2 7 123 14 130 6.30e-14 68.2
MS.gene064328.t1 AT3G63150 28.571 175 115 5 7 180 15 180 2.22e-13 68.6
MS.gene064328.t1 AT2G21880 29.697 165 101 5 26 184 4 159 3.44e-13 65.9
MS.gene064328.t1 AT2G21880 29.697 165 101 5 26 184 4 159 3.44e-13 65.9

Find 47 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATGGAAGCATTGTGAATT+TGG 0.222822 6.1:-76732977 MS.gene064328:CDS
ACAAGAACAATTGGTACATT+AGG 0.278025 6.1:+76731434 None:intergenic
CTTGGCATTTCTTTCCTCCT+TGG 0.280179 6.1:+76730801 None:intergenic
GCATTGTGAATTTGGGACTA+TGG 0.282030 6.1:-76732969 MS.gene064328:CDS
CAAGAACAATTGGTACATTA+GGG 0.336893 6.1:+76731435 None:intergenic
TACAGTGGGAAATTTGTTAC+TGG 0.337151 6.1:+76733646 None:intergenic
GAAGAACTGAGGAAACAAAT+TGG 0.341763 6.1:-76731034 MS.gene064328:CDS
AATGTACCAATTGTTCTTGT+TGG 0.346567 6.1:-76731431 MS.gene064328:CDS
GGGGCGAATCTACGCAATTC+TGG 0.349508 6.1:+76731455 None:intergenic
TCAACCTGCTATAATCTTCT+TGG 0.373752 6.1:+76732803 None:intergenic
GGCATTTCTTTCCTCCTTGG+AGG 0.381404 6.1:+76730804 None:intergenic
AGGTTGAAGAACAACCTTAA+TGG 0.384098 6.1:+76730824 None:intergenic
TTTGTACCAACAAGAACAAT+TGG 0.404206 6.1:+76731425 None:intergenic
TGTTCTTGTTGGTACAAAGT+TGG 0.419030 6.1:-76731420 MS.gene064328:CDS
AAGAACTGAGGAAACAAATT+GGG 0.422553 6.1:-76731033 MS.gene064328:CDS
GTTCTTGTTGGTACAAAGTT+GGG 0.423240 6.1:-76731419 MS.gene064328:intron
CTATGAAAATGTTCTTAAGA+AGG 0.449203 6.1:-76732716 MS.gene064328:intron
TTGAGGCCACTGAGCTATAG+AGG 0.451519 6.1:-76732784 MS.gene064328:CDS
CACTTACACAAACGAGCAAC+CGG 0.459245 6.1:+76730758 None:intergenic
AAGAAATGCCAAGGAAGAAA+AGG 0.469586 6.1:-76730791 MS.gene064328:CDS
GATGGAAGCATTGTGAATTT+GGG 0.471347 6.1:-76732976 MS.gene064328:CDS
CATTGTGAATTTGGGACTAT+GGG 0.489001 6.1:-76732968 MS.gene064328:CDS
TGGATATTTCGCTGATCACA+CGG 0.507522 6.1:-76731275 MS.gene064328:CDS
GTGCAGCTCGAAGACTCAAC+AGG 0.511942 6.1:-76730993 MS.gene064328:intron
TACCACAGGGGTATTGTGTG+TGG 0.519310 6.1:-76729985 MS.gene064328:intron
CAGGCCAAGAAGATTATAGC+AGG 0.520528 6.1:-76732807 MS.gene064328:CDS
CAAGGAAGAAAAGGCAAAGA+AGG 0.532454 6.1:-76730782 MS.gene064328:CDS
ACTGTTGGTGATGGTGCTGT+TGG 0.537659 6.1:-76733695 MS.gene064328:CDS
AAGAAAAGGCAAAGAAGGTC+CGG 0.538145 6.1:-76730777 MS.gene064328:CDS
TTCATTAAATGTGTCACTGT+TGG 0.541909 6.1:-76733710 MS.gene064328:CDS
AGGTTGTTCTTCAACCTCCA+AGG 0.567491 6.1:-76730818 MS.gene064328:CDS
CTAAAATTATCAAATACTGT+TGG 0.567683 6.1:+76733015 None:intergenic
AGTGCAAATGTAGCTGTGGA+TGG 0.578876 6.1:-76732994 MS.gene064328:CDS
AAGAAGATTATAGCAGGTTG+AGG 0.589934 6.1:-76732801 MS.gene064328:CDS
AAATGTGTCACTGTTGGTGA+TGG 0.594720 6.1:-76733704 MS.gene064328:CDS
CACAGGGGTATTGTGTGTGG+AGG 0.605217 6.1:-76729982 MS.gene064328:intron
CAAGGAGGAAAGAAATGCCA+AGG 0.611296 6.1:-76730800 MS.gene064328:CDS
TTGGGACTATGGGACACTGC+AGG 0.615110 6.1:-76732958 MS.gene064328:intron
GGATATTTCGCTGATCACAC+GGG 0.622383 6.1:-76731274 MS.gene064328:CDS
TAATGTTATAACATCTGCTG+AGG 0.624985 6.1:-76731248 MS.gene064328:intron
TTAGATCTTCGTGAAGATCG+TGG 0.626265 6.1:-76731295 MS.gene064328:intron
AGAACTGAGGAAACAAATTG+GGG 0.675214 6.1:-76731032 MS.gene064328:CDS
CTTTGTAGGGAGAAGAACTG+AGG 0.678121 6.1:-76731045 MS.gene064328:intron
TTGTTCTTCAACCTCCAAGG+AGG 0.684078 6.1:-76730815 MS.gene064328:CDS
TCTGCTCCTCTATAGCTCAG+TGG 0.686899 6.1:+76732778 None:intergenic
AAGAACAATTGGTACATTAG+GGG 0.696220 6.1:+76731436 None:intergenic
GCTGCACTCAATGTACGCTG+CGG 0.739612 6.1:+76731009 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTAATTTTT+GGG - chr6.1:76730641-76730660 MS.gene064328:intron 0.0%
!!! TTTTTTTTTTTTTTAATTTT+TGG - chr6.1:76730640-76730659 MS.gene064328:intron 0.0%
!! AAAGATCAAAAATTAAAAAA+AGG + chr6.1:76730128-76730147 None:intergenic 10.0%
!! AAGATCAAAAATTAAAAAAA+GGG + chr6.1:76730127-76730146 None:intergenic 10.0%
!! AATTATCAAATAAATTGATA+GGG - chr6.1:76731655-76731674 MS.gene064328:intron 10.0%
!! ATTATAAAAATTACAGAAAT+AGG + chr6.1:76731993-76732012 None:intergenic 10.0%
!! TAATTATCAAATAAATTGAT+AGG - chr6.1:76731654-76731673 MS.gene064328:intron 10.0%
!! TAGGAAATTTATATAATATA+TGG + chr6.1:76730094-76730113 None:intergenic 10.0%
!!! AAAATTTATTGATTAGAAAA+AGG - chr6.1:76730803-76730822 MS.gene064328:CDS 10.0%
!!! ACATTTTTTATAAACTTTTT+CGG - chr6.1:76730258-76730277 MS.gene064328:intron 10.0%
!!! ATTTTTTACTTTTATTATTC+TGG - chr6.1:76732318-76732337 MS.gene064328:intron 10.0%
!! AATGTAATCTTAAACATAAA+TGG - chr6.1:76731818-76731837 MS.gene064328:intron 15.0%
!! AGATCAAAAATTAAAAAAAG+GGG + chr6.1:76730126-76730145 None:intergenic 15.0%
!! ATAAGTTAATAATAGCAAAT+AGG + chr6.1:76733375-76733394 None:intergenic 15.0%
!! ATGATTCAATTTCAAATAAT+AGG + chr6.1:76732974-76732993 None:intergenic 15.0%
!! ATGTAATCTTAAACATAAAT+GGG - chr6.1:76731819-76731838 MS.gene064328:intron 15.0%
!! TATTTATTATGGTTTCAAAT+AGG + chr6.1:76731632-76731651 None:intergenic 15.0%
!! TGCTATTATTAACTTATATT+AGG - chr6.1:76733378-76733397 MS.gene064328:intron 15.0%
!!! ATTTTCTTTTTGTTGAAAAA+AGG + chr6.1:76730788-76730807 None:intergenic 15.0%
!!! CATTTTCTTTAAATTAGTTA+TGG + chr6.1:76733304-76733323 None:intergenic 15.0%
!!! TTTTTAACAGTTCTAATATT+CGG + chr6.1:76733427-76733446 None:intergenic 15.0%
!! AAAAAGAAGAAAAATTACAG+TGG + chr6.1:76730066-76730085 None:intergenic 20.0%
!! AAAAGAAGAAAAATTACAGT+GGG + chr6.1:76730065-76730084 None:intergenic 20.0%
!! AAATTAGTTATGGTTTGATT+CGG + chr6.1:76733294-76733313 None:intergenic 20.0%
!! CAAACTTTACCTTTATAAAT+AGG - chr6.1:76731862-76731881 MS.gene064328:intron 20.0%
!! CATAAACACTTATATGATAA+TGG - chr6.1:76731315-76731334 MS.gene064328:intron 20.0%
!! CTAAAATTATCAAATACTGT+TGG + chr6.1:76730682-76730701 None:intergenic 20.0%
!! CTCATAACTTTATATGAAAA+CGG - chr6.1:76731252-76731271 MS.gene064328:CDS 20.0%
!! GATTAGAAAAAGGAAAAAAA+AGG - chr6.1:76730813-76730832 MS.gene064328:CDS 20.0%
!! TAAACAAGTTAATCTTTGTA+GGG - chr6.1:76732636-76732655 MS.gene064328:intron 20.0%
!! TCTAAATATGTTAATGTTAC+TGG - chr6.1:76730617-76730636 MS.gene064328:intron 20.0%
!! TGAATAGTATATACAGTTTA+TGG - chr6.1:76733085-76733104 MS.gene064328:intron 20.0%
!! TGATCACTTATACTAATATA+AGG - chr6.1:76730474-76730493 MS.gene064328:intron 20.0%
!! TGTAATCTTAAACATAAATG+GGG - chr6.1:76731820-76731839 MS.gene064328:intron 20.0%
!! TTAAACAAGTTAATCTTTGT+AGG - chr6.1:76732635-76732654 MS.gene064328:intron 20.0%
!! TTTCATAAATTCTTCAAGAT+AGG - chr6.1:76730286-76730305 MS.gene064328:intron 20.0%
!!! AAAAAAGGGGAATTTTTTTT+AGG + chr6.1:76730113-76730132 None:intergenic 20.0%
!!! AAAAGAAAAGGTATTATAAG+AGG + chr6.1:76731029-76731048 None:intergenic 20.0%
!!! CATGTTACTTTTAACTATTT+TGG - chr6.1:76733570-76733589 MS.gene064328:intron 20.0%
!!! TAAATTTGACAACACATTTT+TGG - chr6.1:76731890-76731909 MS.gene064328:intron 20.0%
!!! TATGATTTTTGATTTGTGTA+AGG - chr6.1:76730547-76730566 MS.gene064328:intron 20.0%
!!! TTTTCTCTTGTTTCTATTTT+TGG - chr6.1:76731060-76731079 MS.gene064328:intron 20.0%
!!! TTTTTTTTTTCAATGTTTGC+AGG - chr6.1:76730868-76730887 MS.gene064328:intron 20.0%
! AATATATACTATGAGCTAGT+TGG - chr6.1:76730176-76730195 MS.gene064328:intron 25.0%
! AATCAGTTCAGTTTGAATAT+AGG + chr6.1:76733334-76733353 None:intergenic 25.0%
! AATTAAGCACATGATAACAT+TGG + chr6.1:76730512-76730531 None:intergenic 25.0%
! AGTAAGGAAATTAGATTGTT+CGG - chr6.1:76733120-76733139 MS.gene064328:intron 25.0%
! CTATGAAAATGTTCTTAAGA+AGG - chr6.1:76730978-76730997 MS.gene064328:intron 25.0%
! TGAATCATACTTCAAATGAT+TGG - chr6.1:76732986-76733005 MS.gene064328:CDS 25.0%
! TTTAGTGCACCTATTTATAA+AGG + chr6.1:76731874-76731893 None:intergenic 25.0%
!! TCTGAAATTATTTGATGTGT+TGG - chr6.1:76732570-76732589 MS.gene064328:intron 25.0%
!!! AGGTACTTAAAACTTTGTTT+TGG - chr6.1:76730756-76730775 MS.gene064328:intron 25.0%
!!! ATGGAGATTTTTTAACAGTA+AGG - chr6.1:76733104-76733123 MS.gene064328:intron 25.0%
!!! TAATGTTCTTAGCTTTAGAT+TGG - chr6.1:76732175-76732194 MS.gene064328:intron 25.0%
!!! TCAAGTTGAAAATGAATCTT+TGG - chr6.1:76731711-76731730 MS.gene064328:intron 25.0%
!!! TTTTTTAATTTTTGGGTTGC+AGG - chr6.1:76730648-76730667 MS.gene064328:intron 25.0%
!!! TTTTTTGTTTTCTCTTTCAG+TGG - chr6.1:76732213-76732232 MS.gene064328:intron 25.0%
AAGAACAATTGGTACATTAG+GGG + chr6.1:76732261-76732280 None:intergenic 30.0%
AAGAACTGAGGAAACAAATT+GGG - chr6.1:76732661-76732680 MS.gene064328:intron 30.0%
AATAAGCTGTTTATCCAAAC+AGG - chr6.1:76730412-76730431 MS.gene064328:intron 30.0%
AATGTACCAATTGTTCTTGT+TGG - chr6.1:76732263-76732282 MS.gene064328:intron 30.0%
ACAAGAACAATTGGTACATT+AGG + chr6.1:76732263-76732282 None:intergenic 30.0%
AGTCAAATGTAACAAGTGTA+TGG + chr6.1:76733664-76733683 None:intergenic 30.0%
ATAAGCTGTTTATCCAAACA+GGG - chr6.1:76730413-76730432 MS.gene064328:intron 30.0%
CAAGAACAATTGGTACATTA+GGG + chr6.1:76732262-76732281 None:intergenic 30.0%
GTTGAAAATGAATCTTTGGT+TGG - chr6.1:76731715-76731734 MS.gene064328:intron 30.0%
TAATGTTATAACATCTGCTG+AGG - chr6.1:76732446-76732465 MS.gene064328:intron 30.0%
TATTGAAATCCAAAGTTGTC+AGG - chr6.1:76732742-76732761 MS.gene064328:CDS 30.0%
TCTGTCTAGTGATTTAATAG+TGG - chr6.1:76733522-76733541 MS.gene064328:intron 30.0%
TGGTGAGAATGATCTATTAT+TGG + chr6.1:76732081-76732100 None:intergenic 30.0%
TTCTTCTCTTAGTAGGTTAA+AGG + chr6.1:76732345-76732364 None:intergenic 30.0%
TTGTGTAAGGATTCTAATTC+TGG - chr6.1:76730560-76730579 MS.gene064328:intron 30.0%
TTTGTACCAACAAGAACAAT+TGG + chr6.1:76732272-76732291 None:intergenic 30.0%
! AACAGTTCTAATATTCGGTT+TGG + chr6.1:76733422-76733441 None:intergenic 30.0%
! AGGTCTTTTATGATGTATGT+TGG - chr6.1:76732762-76732781 MS.gene064328:CDS 30.0%
! ATTATTTGATGTGTTGGCAA+TGG - chr6.1:76732576-76732595 MS.gene064328:intron 30.0%
! ATTGATAGCTACTTGATGAT+AGG - chr6.1:76731777-76731796 MS.gene064328:intron 30.0%
! TTCATTAAATGTGTCACTGT+TGG - chr6.1:76729984-76730003 MS.gene064328:intron 30.0%
! TTGATAGCTACTTGATGATA+GGG - chr6.1:76731778-76731797 MS.gene064328:intron 30.0%
!! ATAAGTTTTGTGAGACTGTT+TGG - chr6.1:76730231-76730250 MS.gene064328:intron 30.0%
!! TGTTTTTGATACTGCCATTA+AGG - chr6.1:76732856-76732875 MS.gene064328:intron 30.0%
!! TTCTAATATTCGGTTTGGTT+CGG + chr6.1:76733417-76733436 None:intergenic 30.0%
!! TTTGCATGTTGGTGATAAAT+CGG - chr6.1:76731388-76731407 MS.gene064328:intron 30.0%
!!! CTATCTTCTTTTTTACCACA+GGG - chr6.1:76733696-76733715 MS.gene064328:CDS 30.0%
!!! TATCTTCTTTTTTACCACAG+GGG - chr6.1:76733697-76733716 MS.gene064328:CDS 30.0%
!!! TCTATCTTCTTTTTTACCAC+AGG - chr6.1:76733695-76733714 MS.gene064328:CDS 30.0%
AACATGCAAACATAGGTTCA+TGG + chr6.1:76731378-76731397 None:intergenic 35.0%
AAGAAATGCCAAGGAAGAAA+AGG - chr6.1:76732903-76732922 MS.gene064328:intron 35.0%
AAGAAGATTATAGCAGGTTG+AGG - chr6.1:76730893-76730912 MS.gene064328:intron 35.0%
ACAAACCATTAACACGAGTA+TGG + chr6.1:76733225-76733244 None:intergenic 35.0%
AGAACTGAGGAAACAAATTG+GGG - chr6.1:76732662-76732681 MS.gene064328:intron 35.0%
AGGTTGAAGAACAACCTTAA+TGG + chr6.1:76732873-76732892 None:intergenic 35.0%
ATCGAGCGTTTATATCAGTT+TGG + chr6.1:76733254-76733273 None:intergenic 35.0%
ATGAACCTATGTTTGCATGT+TGG - chr6.1:76731377-76731396 MS.gene064328:intron 35.0%
CAAATAATAGGAGCAAGAGA+CGG + chr6.1:76732962-76732981 None:intergenic 35.0%
CAAATGCAAGTTCCTATAGT+TGG - chr6.1:76733617-76733636 MS.gene064328:intron 35.0%
CATAAAAGACCTGACAACTT+TGG + chr6.1:76732754-76732773 None:intergenic 35.0%
CATAACATAGAGATCTACCT+CGG - chr6.1:76732099-76732118 MS.gene064328:intron 35.0%
CGAAAAGAACTGAAATGTGA+CGG - chr6.1:76733477-76733496 MS.gene064328:intron 35.0%
CTTATTTCCATAAGCTTGTC+AGG - chr6.1:76731212-76731231 MS.gene064328:intron 35.0%
GAAGAACTGAGGAAACAAAT+TGG - chr6.1:76732660-76732679 MS.gene064328:intron 35.0%
GAGGAAGCAAAGAAATAGTT+AGG + chr6.1:76731010-76731029 None:intergenic 35.0%
GATATTGCTAGTACTGTTGA+TGG - chr6.1:76733149-76733168 MS.gene064328:intron 35.0%
GTCTAGTGATTTAATAGTGG+AGG - chr6.1:76733525-76733544 MS.gene064328:intron 35.0%
GTTCTTGTTGGTACAAAGTT+GGG - chr6.1:76732275-76732294 MS.gene064328:intron 35.0%
TAGTCTCTTCTTCTCTTAGT+AGG + chr6.1:76732352-76732371 None:intergenic 35.0%
TATCACCAACATGCAAACAT+AGG + chr6.1:76731385-76731404 None:intergenic 35.0%
TCAACCTGCTATAATCTTCT+TGG + chr6.1:76730894-76730913 None:intergenic 35.0%
TGTTCTTGTTGGTACAAAGT+TGG - chr6.1:76732274-76732293 MS.gene064328:intron 35.0%
TTATAACATCTGCTGAGGTA+TGG - chr6.1:76732451-76732470 MS.gene064328:intron 35.0%
TTGTTCATATAGACCCTGTT+TGG + chr6.1:76730429-76730448 None:intergenic 35.0%
! ACTGAACCATCAACACATTT+TGG - chr6.1:76733190-76733209 MS.gene064328:intron 35.0%
! CATTGTGAATTTGGGACTAT+GGG - chr6.1:76730726-76730745 MS.gene064328:intron 35.0%
! CGTCACATTTCAGTTCTTTT+CGG + chr6.1:76733479-76733498 None:intergenic 35.0%
! CGTTTTATGAAACTCACTGT+TGG - chr6.1:76732500-76732519 MS.gene064328:intron 35.0%
! GTTTTGCCAAAATGTGTTGA+TGG + chr6.1:76733199-76733218 None:intergenic 35.0%
! TTCAAATTGGTTTAGCGGTT+TGG + chr6.1:76733451-76733470 None:intergenic 35.0%
! TTTTAGTGCAAATGTAGCTG+TGG - chr6.1:76730696-76730715 MS.gene064328:intron 35.0%
!! GATGGAAGCATTGTGAATTT+GGG - chr6.1:76730718-76730737 MS.gene064328:intron 35.0%
!! TACAGTGGGAAATTTGTTAC+TGG + chr6.1:76730051-76730070 None:intergenic 35.0%
!! TACTGTTGATGGTTCAATTC+AGG - chr6.1:76733160-76733179 MS.gene064328:intron 35.0%
!! TGATTGGTCTTTGCATTTGA+TGG - chr6.1:76733002-76733021 MS.gene064328:CDS 35.0%
!! TTGATTCGGAAACACAGAAT+CGG + chr6.1:76733280-76733299 None:intergenic 35.0%
AAGAAAAGGCAAAGAAGGTC+CGG - chr6.1:76732917-76732936 MS.gene064328:intron 40.0%
AAGCTTTCCTGACAAGCTTA+TGG + chr6.1:76731222-76731241 None:intergenic 40.0%
ACTGACCATACTCGTGTTAA+TGG - chr6.1:76733217-76733236 MS.gene064328:intron 40.0%
AGAATCTCAGCACCAACTAT+AGG + chr6.1:76733632-76733651 None:intergenic 40.0%
AGAGAGAAGTCAACAAGCTA+TGG + chr6.1:76731750-76731769 None:intergenic 40.0%
CAAGGAAGAAAAGGCAAAGA+AGG - chr6.1:76732912-76732931 MS.gene064328:intron 40.0%
CGAGGTAGATCTCTATGTTA+TGG + chr6.1:76732101-76732120 None:intergenic 40.0%
GAAACTCACTGTTGGACTAA+AGG - chr6.1:76732508-76732527 MS.gene064328:intron 40.0%
TCACTTGTGAGACTGTTTGA+GGG - chr6.1:76731145-76731164 MS.gene064328:intron 40.0%
TGCAAACATAGGTTCATGGT+TGG + chr6.1:76731374-76731393 None:intergenic 40.0%
TGGATATTTCGCTGATCACA+CGG - chr6.1:76732419-76732438 MS.gene064328:intron 40.0%
TTAGATCTTCGTGAAGATCG+TGG - chr6.1:76732399-76732418 MS.gene064328:intron 40.0%
TTCACTTGTGAGACTGTTTG+AGG - chr6.1:76731144-76731163 MS.gene064328:intron 40.0%
TTCTGGTGTATCAGAACACA+TGG - chr6.1:76732134-76732153 MS.gene064328:intron 40.0%
! AAATGTGTCACTGTTGGTGA+TGG - chr6.1:76729990-76730009 MS.gene064328:intron 40.0%
! CATTTCAGTTCTTTTCGGTG+CGG + chr6.1:76733474-76733493 None:intergenic 40.0%
! CTTCTTTGCCTTTTCTTCCT+TGG + chr6.1:76732914-76732933 None:intergenic 40.0%
! GCATTGTGAATTTGGGACTA+TGG - chr6.1:76730725-76730744 MS.gene064328:intron 40.0%
! GTTTTGTGAGACTGTTTGGA+AGG - chr6.1:76730235-76730254 MS.gene064328:intron 40.0%
! TGCGGTTCAAATTGGTTTAG+CGG + chr6.1:76733456-76733475 None:intergenic 40.0%
! TTGGTGATAAATCGGAGGAA+AGG - chr6.1:76731396-76731415 MS.gene064328:intron 40.0%
!! GCTTGTTGACTTCTCTCTTA+TGG - chr6.1:76731752-76731771 MS.gene064328:intron 40.0%
!! GGATGGAAGCATTGTGAATT+TGG - chr6.1:76730717-76730736 MS.gene064328:intron 40.0%
!! GTTGATGGTTCAATTCAGGA+AGG - chr6.1:76733164-76733183 MS.gene064328:intron 40.0%
AGGTTGTTCTTCAACCTCCA+AGG - chr6.1:76732876-76732895 MS.gene064328:intron 45.0%
AGTGCAAATGTAGCTGTGGA+TGG - chr6.1:76730700-76730719 MS.gene064328:intron 45.0%
CAAGGAGGAAAGAAATGCCA+AGG - chr6.1:76732894-76732913 MS.gene064328:intron 45.0%
CACTTACACAAACGAGCAAC+CGG + chr6.1:76732939-76732958 None:intergenic 45.0%
CAGGCCAAGAAGATTATAGC+AGG - chr6.1:76730887-76730906 MS.gene064328:intron 45.0%
CTTGGCATTTCTTTCCTCCT+TGG + chr6.1:76732896-76732915 None:intergenic 45.0%
CTTTGTAGGGAGAAGAACTG+AGG - chr6.1:76732649-76732668 MS.gene064328:intron 45.0%
GAGAAGTCAACAAGCTATGG+TGG + chr6.1:76731747-76731766 None:intergenic 45.0%
GGATATTTCGCTGATCACAC+GGG - chr6.1:76732420-76732439 MS.gene064328:intron 45.0%
TTGTTCTTCAACCTCCAAGG+AGG - chr6.1:76732879-76732898 MS.gene064328:intron 45.0%
! TTGATGTGTTGGCAATGGCA+AGG - chr6.1:76732581-76732600 MS.gene064328:intron 45.0%
!! CTTTTCGGTGCGGTTCAAAT+TGG + chr6.1:76733464-76733483 None:intergenic 45.0%
!! GCATGTTGGTGATAAATCGG+AGG - chr6.1:76731391-76731410 MS.gene064328:intron 45.0%
!! ATAAATTAAATAAAAAGAAA+AGG + chr6.1:76731041-76731060 None:intergenic 5.0%
!! TGATAATTATTTATTTATTA+TGG + chr6.1:76731643-76731662 None:intergenic 5.0%
!!! GTAATTTTTATAATAATTTT+GGG - chr6.1:76731999-76732018 MS.gene064328:intron 5.0%
!!! TGTAATTTTTATAATAATTT+TGG - chr6.1:76731998-76732017 MS.gene064328:intron 5.0%
GGCATTTCTTTCCTCCTTGG+AGG + chr6.1:76732893-76732912 None:intergenic 50.0%
TCTGCTCCTCTATAGCTCAG+TGG + chr6.1:76730919-76730938 None:intergenic 50.0%
TTGAGGCCACTGAGCTATAG+AGG - chr6.1:76730910-76730929 MS.gene064328:intron 50.0%
!! ACTGTTGGTGATGGTGCTGT+TGG - chr6.1:76729999-76730018 MS.gene064328:intron 50.0%
!! TACCACAGGGGTATTGTGTG+TGG - chr6.1:76733709-76733728 MS.gene064328:CDS 50.0%
AGATCTACCTCGGCATTGCG+AGG - chr6.1:76732109-76732128 MS.gene064328:intron 55.0%
CTCCACACACAATACCCCTG+TGG + chr6.1:76733714-76733733 None:intergenic 55.0%
GCTGCACTCAATGTACGCTG+CGG + chr6.1:76732688-76732707 None:intergenic 55.0%
GGGGCGAATCTACGCAATTC+TGG + chr6.1:76732242-76732261 None:intergenic 55.0%
GTGCAGCTCGAAGACTCAAC+AGG - chr6.1:76732701-76732720 MS.gene064328:intron 55.0%
TTGGGACTATGGGACACTGC+AGG - chr6.1:76730736-76730755 MS.gene064328:intron 55.0%
!! CACAGGGGTATTGTGTGTGG+AGG - chr6.1:76733712-76733731 MS.gene064328:CDS 55.0%
CAGAAAGCCTCGCAATGCCG+AGG + chr6.1:76732119-76732138 None:intergenic 60.0%
CTCGGCATTGCGAGGCTTTC+TGG - chr6.1:76732117-76732136 MS.gene064328:intron 60.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 76729969 76733747 76729969 ID=MS.gene064328
chr6.1 mRNA 76729969 76733747 76729969 ID=MS.gene064328.t1;Parent=MS.gene064328
chr6.1 exon 76733649 76733747 76733649 ID=MS.gene064328.t1.exon1;Parent=MS.gene064328.t1
chr6.1 CDS 76733649 76733747 76733649 ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1
chr6.1 exon 76732959 76733046 76732959 ID=MS.gene064328.t1.exon2;Parent=MS.gene064328.t1
chr6.1 CDS 76732959 76733046 76732959 ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1
chr6.1 exon 76732717 76732826 76732717 ID=MS.gene064328.t1.exon3;Parent=MS.gene064328.t1
chr6.1 CDS 76732717 76732826 76732717 ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1
chr6.1 exon 76731420 76731483 76731420 ID=MS.gene064328.t1.exon4;Parent=MS.gene064328.t1
chr6.1 CDS 76731420 76731483 76731420 ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1
chr6.1 exon 76731249 76731313 76731249 ID=MS.gene064328.t1.exon5;Parent=MS.gene064328.t1
chr6.1 CDS 76731249 76731313 76731249 ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1
chr6.1 exon 76730994 76731059 76730994 ID=MS.gene064328.t1.exon6;Parent=MS.gene064328.t1
chr6.1 CDS 76730994 76731059 76730994 ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1
chr6.1 exon 76730765 76730871 76730765 ID=MS.gene064328.t1.exon7;Parent=MS.gene064328.t1
chr6.1 CDS 76730765 76730871 76730765 ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1
chr6.1 exon 76729969 76729999 76729969 ID=MS.gene064328.t1.exon8;Parent=MS.gene064328.t1
chr6.1 CDS 76729969 76729999 76729969 ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1
Gene Sequence

>MS.gene064328

ATGAGTGCATCAAAGTTCATTAAATGTGTCACTGTTGGTGATGGTGCTGTTGGAAAAACTTGCATGCTCATTTGTTACACCAGTAACAAATTTCCCACTGTAATTTTTCTTCTTTTTATCTTCCATATATTATATAAATTTCCTAAAAAAAATTCCCCTTTTTTTAATTTTTGATCTTTTATTATTTAATTGTTTTTCTGTCTTCAAAATATATACTATGAGCTAGTTGGATTGACTTAATTTTCGTTTATCTACTGATATTATAAGTTTTGTGAGACTGTTTGGAAGGACATTTTTTATAAACTTTTTCGGCTTATTTTCATAAATTCTTCAAGATAGGTTATGACATATACAAAAACAATTTAATTTTATTTAATTTTATATTTTTCTATAAAAATAGCTTATGTAGCTTATACATAAGTGCTTATTATGATAAGCTGCAAAATAAGCTGTTTATCCAAACAGGGTCTATATGAACAAGATAAATATTTGAACATTTTAATGCTGATCACTTATACTAATATAAGGTCATTTTTTATTCCAATGTTATCATGTGCTTAATTATATCTTTTACAGCTTATGATTTTTGATTTGTGTAAGGATTCTAATTCTGGTAATCTTATGATTTTTTTTTTTGATAATTTTTTTTCTAAATATGTTAATGTTACTGGTTTTTTTTTTTTTTAATTTTTGGGTTGCAGGATTATATACCAACAGTATTTGATAATTTTAGTGCAAATGTAGCTGTGGATGGAAGCATTGTGAATTTGGGACTATGGGACACTGCAGGTACTTAAAACTTTGTTTTGGTTTTTTCCTTTTTTCAACAAAAAGAAAATTTATTGATTAGAAAAAGGAAAAAAAAGGAATTTTTTTGTTCATAATTAATAATTTGATGCTTTTTTTTTTCAATGTTTGCAGGCCAAGAAGATTATAGCAGGTTGAGGCCACTGAGCTATAGAGGAGCAGATATATTTGTATTAGCATTTTCATTGATTAGTAGAGCTAGCTATGAAAATGTTCTTAAGAAGGTTCATGCCTAACTATTTCTTTGCTTCCTCTTATAATACCTTTTCTTTTTATTTAATTTATTTTCTCTTGTTTCTATTTTTGGATTCATATTTTCTCTTGTTTCTATTTTTGGATTCTTGTTTCTATTTCTTTGCTTCATGTTTTTCACTTGTGAGACTGTTTGAGGGAGTTTATGAAAACAACTTACGACATGTGCATAAACTGTTTTTAGCTTATTTCCATAAGCTTGTCAGGAAAGCTTATGAAAACAACTCATAACTTTATATGAAAACGGTTTAACTATGTTTTATCTTTTGTCAAAGAAATAACTTATACATAAACACTTATATGATAATGGTTTATGTTATAAGCACTTAATTGCGTTTTTTATCCAACCATGAACCTATGTTTGCATGTTGGTGATAAATCGGAGGAAAGGAAAATAGTTGTAGATAGAAACTATAGTAGAAAGTTCATAATGCAAAACATTATATTGTGCTAGATGAAATTAAATTCTACTATGCTCTTTTCATGAACATGTTTTTGAAATATGTTGCTTAAAATATTTGTTAACTGTTTAGCACTATTTTGTTACAATTGTTAAAAGAGTGAAACTTAAAATTTGAAATGCTGAAATTGTCTCTTGCAACCTATTTGAAACCATAATAAATAAATAATTATCAAATAAATTGATAGGGACATTATGCAGACAATATTTCAAAACATAGAAATCAAGTTGAAAATGAATCTTTGGTTGGTTTTTTCCACCATAGCTTGTTGACTTCTCTCTTATGGCTATTGATAGCTACTTGATGATAGGGAAAGAAAATTATTAGCTAATGTAATCTTAAACATAAATGGGGTGTCATATTTTATTAATTTCAAACTTTACCTTTATAAATAGGTGCACTAAATTTGACAACACATTTTTGGTAAAGATATCACTAAAATTTACTGTTGATAATTGATAGAATGATGCATTTTCTTTAAGCATAAGTTTGCAATTGTTTCCTATTTCTGTAATTTTTATAATAATTTTGGGTCTGCTTATGACTTACACTGTTGAACAATTGCACATTTTCATTGTATTCATAATTACCAATAATAGATCATTCTCACCATAACATAGAGATCTACCTCGGCATTGCGAGGCTTTCTGGTGTATCAGAACACATGGCATTCATGCACATGCACTTAATGTTCTTAGCTTTAGATTGGTTATTCATTTCGACTTTTTTTGTTTTCTCTTTCAGTGGATGCCAGAATTGCGTAGATTCGCCCCTAATGTACCAATTGTTCTTGTTGGTACAAAGTTGGGTAAGTAATAGCTCATACAAAATTTTTTACTTTTATTATTCTGGTCCTTTAACCTACTAAGAGAAGAAGAGACTAATGACATAAAGTATTGAATTCTTGATTTTAGATCTTCGTGAAGATCGTGGATATTTCGCTGATCACACGGGATATAATGTTATAACATCTGCTGAGGTATGGATTCTTCATATTTGTTTTTTCTCTATCGTTTTATGAAACTCACTGTTGGACTAAAGGCTATATCATATAAATAATCTATGTAAATCTTTACATAAATCTGAAATTATTTGATGTGTTGGCAATGGCAAGGTTTGTTAAGATTAACATCTTAAGCGCATTTATTAAACAAGTTAATCTTTGTAGGGAGAAGAACTGAGGAAACAAATTGGGGCCGCAGCGTACATTGAGTGCAGCTCGAAGACTCAACAGGTAGCATGTTTAAATTTGATATTGAAATCCAAAGTTGTCAGGTCTTTTATGATGTATGTTGGTTTCTCTTTGCAGAATCTTATGACAAAAAGAATCTAATTTAATGTGTTTATATGATTTAGAACGTGAAAGCTGTTTTTGATACTGCCATTAAGGTTGTTCTTCAACCTCCAAGGAGGAAAGAAATGCCAAGGAAGAAAAGGCAAAGAAGGTCCGGTTGCTCGTTTGTGTAAGTGCCGTCTCTTGCTCCTATTATTTGAAATTGAATCATACTTCAAATGATTGGTCTTTGCATTTGATGGATGATATTCTCATATACTCATATTTACTAATATAGTTTAATTCAAGACTAATTTGAAGATTGAATAGTATATACAGTTTATGGAGATTTTTTAACAGTAAGGAAATTAGATTGTTCGGCAAGTTGATATTGCTAGTACTGTTGATGGTTCAATTCAGGAAGGAAAACTGAACCATCAACACATTTTGGCAAAACTGACCATACTCGTGTTAATGGTTTGTCTCAAACCAAACTGATATAAACGCTCGATGCTCCGATTCTGTGTTTCCGAATCAAACCATAACTAATTTAAAGAAAATGAAGTGTACCTATATTCAAACTGAACTGATTTTTTTGAATCTAATTTTACCTATTTGCTATTATTAACTTATATTAGGACTGTTAAAAAAGCCGAACCAAACCGAATATTAGAACTGTTAAAAAACCAAACCGCTAAACCAATTTGAACCGCACCGAAAAGAACTGAAATGTGACGGATAGTTCACGAATCGTGAACTATCTGTCTAGTGATTTAATAGTGGAGGCACACATTTAAACATAATATGTCATGTTACTTTTAACTATTTTGGCTCATTTGCATGAATGAAACTTTGCAAATGCAAGTTCCTATAGTTGGTGCTGAGATTCTTAGATGTTACCATACACTTGTTACATTTGACTGTATGTTAACATCTATCTTCTTTTTTACCACAGGGGTATTGTGTGTGGAGGTTGTGCTGCTTAA

Protein sequence

>MS.gene064328.t1

MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLDLREDRGYFADHTGYNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKEMPRKKRQRRSGCSFVGIVCGGCAA