Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064328.t1 | XP_003620632.1 | 99.5 | 209 | 1 | 0 | 1 | 209 | 1 | 209 | 2.20E-115 | 424.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064328.t1 | O82480 | 91.4 | 210 | 15 | 2 | 1 | 209 | 1 | 208 | 9.5e-107 | 387.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064328.t1 | A7UQU4 | 99.5 | 209 | 1 | 0 | 1 | 209 | 1 | 209 | 1.6e-115 | 424.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049298 | MS.gene064328 | 0.854281 | 1.37E-61 | -1.69E-46 |
MS.gene050707 | MS.gene064328 | 0.813448 | 2.55E-51 | -1.69E-46 |
MS.gene050874 | MS.gene064328 | 0.807008 | 6.24E-50 | -1.69E-46 |
MS.gene050875 | MS.gene064328 | 0.823184 | 1.59E-53 | -1.69E-46 |
MS.gene051896 | MS.gene064328 | 0.809908 | 1.50E-50 | -1.69E-46 |
MS.gene051914 | MS.gene064328 | 0.864041 | 1.62E-64 | -1.69E-46 |
MS.gene052169 | MS.gene064328 | 0.804542 | 2.05E-49 | -1.69E-46 |
MS.gene052209 | MS.gene064328 | 0.817791 | 2.75E-52 | -1.69E-46 |
MS.gene052308 | MS.gene064328 | 0.886803 | 2.49E-72 | -1.69E-46 |
MS.gene053173 | MS.gene064328 | 0.835572 | 1.55E-56 | -1.69E-46 |
MS.gene054551 | MS.gene064328 | 0.839412 | 1.61E-57 | -1.69E-46 |
MS.gene054593 | MS.gene064328 | 0.845047 | 5.18E-59 | -1.69E-46 |
MS.gene054633 | MS.gene064328 | 0.834692 | 2.59E-56 | -1.69E-46 |
MS.gene054662 | MS.gene064328 | 0.840854 | 6.76E-58 | -1.69E-46 |
MS.gene054850 | MS.gene064328 | 0.813922 | 2.00E-51 | -1.69E-46 |
MS.gene054941 | MS.gene064328 | 0.837055 | 6.51E-57 | -1.69E-46 |
MS.gene055308 | MS.gene064328 | 0.866817 | 2.16E-65 | -1.69E-46 |
MS.gene055578 | MS.gene064328 | 0.856127 | 3.97E-62 | -1.69E-46 |
MS.gene056041 | MS.gene064328 | 0.819545 | 1.10E-52 | -1.69E-46 |
MS.gene05640 | MS.gene064328 | 0.872069 | 4.22E-67 | -1.69E-46 |
MS.gene05652 | MS.gene064328 | 0.894971 | 1.49E-75 | -1.69E-46 |
MS.gene057367 | MS.gene064328 | 0.809896 | 1.51E-50 | -1.69E-46 |
MS.gene057458 | MS.gene064328 | 0.806444 | 8.20E-50 | -1.69E-46 |
MS.gene057669 | MS.gene064328 | 0.86767 | 1.15E-65 | -1.69E-46 |
MS.gene058128 | MS.gene064328 | 0.898079 | 7.54E-77 | -1.69E-46 |
MS.gene058789 | MS.gene064328 | 0.820237 | 7.63E-53 | -1.69E-46 |
MS.gene058853 | MS.gene064328 | 0.884134 | 2.49E-71 | -1.69E-46 |
MS.gene05926 | MS.gene064328 | 0.820827 | 5.58E-53 | -1.69E-46 |
MS.gene059616 | MS.gene064328 | 0.920548 | 1.11E-87 | -1.69E-46 |
MS.gene06093 | MS.gene064328 | 0.846333 | 2.32E-59 | -1.69E-46 |
MS.gene060985 | MS.gene064328 | 0.810768 | 9.78E-51 | -1.69E-46 |
MS.gene061099 | MS.gene064328 | 0.800681 | 1.29E-48 | -1.69E-46 |
MS.gene061260 | MS.gene064328 | 0.804062 | 2.59E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene064328 | MS.gene59498 | PPI |
MS.gene064328 | MS.gene67475 | PPI |
MS.gene064328 | MS.gene64799 | PPI |
MS.gene064328 | MS.gene017610 | PPI |
MS.gene67709 | MS.gene064328 | PPI |
MS.gene67474 | MS.gene064328 | PPI |
MS.gene074376 | MS.gene064328 | PPI |
MS.gene064328 | MS.gene44220 | PPI |
MS.gene064328 | MS.gene39545 | PPI |
MS.gene064328 | MS.gene47563 | PPI |
MS.gene28870 | MS.gene064328 | PPI |
MS.gene064328 | MS.gene26862 | PPI |
MS.gene012136 | MS.gene064328 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064328.t1 | MTR_6g087980 | 99.522 | 209 | 1 | 0 | 1 | 209 | 1 | 209 | 5.22e-157 | 432 |
MS.gene064328.t1 | MTR_3g078260 | 76.471 | 204 | 45 | 2 | 2 | 205 | 4 | 204 | 3.93e-117 | 332 |
MS.gene064328.t1 | MTR_4g073250 | 75.000 | 200 | 47 | 1 | 1 | 200 | 1 | 197 | 2.65e-113 | 322 |
MS.gene064328.t1 | MTR_2g090875 | 81.461 | 178 | 33 | 0 | 1 | 178 | 1 | 178 | 1.20e-109 | 312 |
MS.gene064328.t1 | MTR_8g075240 | 79.775 | 178 | 36 | 0 | 1 | 178 | 1 | 178 | 2.21e-106 | 304 |
MS.gene064328.t1 | MTR_4g088055 | 78.652 | 178 | 38 | 0 | 1 | 178 | 1 | 178 | 6.81e-106 | 303 |
MS.gene064328.t1 | MTR_5g022600 | 79.213 | 178 | 37 | 0 | 1 | 178 | 1 | 178 | 9.25e-105 | 300 |
MS.gene064328.t1 | MTR_3g078260 | 87.395 | 119 | 15 | 0 | 2 | 120 | 4 | 122 | 2.67e-76 | 226 |
MS.gene064328.t1 | MTR_3g096350 | 32.584 | 178 | 105 | 5 | 7 | 181 | 13 | 178 | 4.85e-27 | 102 |
MS.gene064328.t1 | MTR_7g103070 | 32.967 | 182 | 107 | 5 | 8 | 185 | 18 | 188 | 6.05e-26 | 100 |
MS.gene064328.t1 | MTR_8g093740 | 32.402 | 179 | 106 | 5 | 6 | 181 | 13 | 179 | 3.41e-25 | 97.8 |
MS.gene064328.t1 | MTR_6g021790 | 32.597 | 181 | 108 | 5 | 1 | 179 | 1 | 169 | 3.81e-25 | 97.8 |
MS.gene064328.t1 | MTR_2g027660 | 32.558 | 172 | 102 | 5 | 1 | 170 | 1 | 160 | 4.05e-24 | 95.1 |
MS.gene064328.t1 | MTR_1g115325 | 31.737 | 167 | 101 | 5 | 6 | 170 | 15 | 170 | 1.03e-23 | 94.4 |
MS.gene064328.t1 | MTR_1g068740 | 31.737 | 167 | 101 | 5 | 6 | 170 | 15 | 170 | 1.56e-23 | 94.0 |
MS.gene064328.t1 | MTR_1g094220 | 32.203 | 177 | 105 | 6 | 7 | 180 | 32 | 196 | 2.28e-23 | 92.8 |
MS.gene064328.t1 | MTR_1g068730 | 31.737 | 167 | 101 | 5 | 6 | 170 | 15 | 170 | 2.42e-23 | 93.2 |
MS.gene064328.t1 | MTR_8g006970 | 32.335 | 167 | 99 | 5 | 6 | 170 | 8 | 162 | 4.77e-23 | 91.7 |
MS.gene064328.t1 | MTR_8g006970 | 31.220 | 205 | 116 | 8 | 6 | 197 | 22 | 214 | 7.33e-23 | 92.0 |
MS.gene064328.t1 | MTR_7g100020 | 31.138 | 167 | 102 | 5 | 6 | 170 | 15 | 170 | 9.64e-23 | 91.7 |
MS.gene064328.t1 | MTR_1g029450 | 30.726 | 179 | 109 | 5 | 6 | 181 | 17 | 183 | 9.95e-23 | 91.7 |
MS.gene064328.t1 | MTR_1g094220 | 32.164 | 171 | 101 | 6 | 7 | 174 | 32 | 190 | 1.16e-22 | 91.3 |
MS.gene064328.t1 | MTR_1g094220 | 32.164 | 171 | 101 | 6 | 7 | 174 | 32 | 190 | 1.40e-22 | 90.9 |
MS.gene064328.t1 | MTR_2g101890 | 31.250 | 208 | 119 | 7 | 6 | 198 | 10 | 208 | 4.30e-22 | 89.7 |
MS.gene064328.t1 | MTR_1g094220 | 32.353 | 170 | 100 | 6 | 7 | 173 | 32 | 189 | 4.59e-22 | 90.5 |
MS.gene064328.t1 | MTR_8g103550 | 32.222 | 180 | 107 | 6 | 8 | 184 | 11 | 178 | 6.79e-22 | 89.0 |
MS.gene064328.t1 | MTR_1g090717 | 30.244 | 205 | 117 | 8 | 8 | 197 | 17 | 210 | 8.00e-22 | 89.4 |
MS.gene064328.t1 | MTR_1g062760 | 31.319 | 182 | 109 | 6 | 8 | 185 | 16 | 185 | 8.53e-22 | 89.0 |
MS.gene064328.t1 | MTR_1g097420 | 29.327 | 208 | 123 | 6 | 6 | 198 | 8 | 206 | 1.34e-21 | 88.6 |
MS.gene064328.t1 | MTR_4g063160 | 31.953 | 169 | 100 | 6 | 6 | 170 | 15 | 172 | 1.38e-21 | 88.6 |
MS.gene064328.t1 | MTR_7g081700 | 31.138 | 167 | 101 | 5 | 6 | 170 | 8 | 162 | 1.62e-21 | 88.2 |
MS.gene064328.t1 | MTR_8g031660 | 31.395 | 172 | 104 | 5 | 1 | 170 | 1 | 160 | 1.92e-21 | 88.2 |
MS.gene064328.t1 | MTR_4g098950 | 33.939 | 165 | 95 | 5 | 8 | 170 | 11 | 163 | 3.45e-21 | 87.4 |
MS.gene064328.t1 | MTR_8g031870 | 29.651 | 172 | 107 | 5 | 1 | 170 | 1 | 160 | 3.72e-21 | 87.0 |
MS.gene064328.t1 | MTR_3g069510 | 31.551 | 187 | 114 | 5 | 6 | 190 | 12 | 186 | 5.64e-21 | 87.0 |
MS.gene064328.t1 | MTR_8g090215 | 35.152 | 165 | 93 | 5 | 8 | 170 | 11 | 163 | 6.91e-21 | 86.7 |
MS.gene064328.t1 | MTR_8g031830 | 30.409 | 171 | 105 | 5 | 1 | 169 | 1 | 159 | 7.13e-21 | 86.3 |
MS.gene064328.t1 | MTR_4g012940 | 30.769 | 208 | 120 | 7 | 6 | 198 | 8 | 206 | 1.14e-20 | 85.9 |
MS.gene064328.t1 | MTR_8g031680 | 29.651 | 172 | 107 | 5 | 1 | 170 | 1 | 160 | 1.76e-20 | 85.5 |
MS.gene064328.t1 | MTR_4g069850 | 29.612 | 206 | 122 | 5 | 6 | 197 | 8 | 204 | 2.65e-20 | 85.1 |
MS.gene064328.t1 | MTR_4g064897 | 29.293 | 198 | 123 | 6 | 6 | 201 | 12 | 194 | 3.76e-20 | 84.7 |
MS.gene064328.t1 | MTR_5g013900 | 33.939 | 165 | 95 | 5 | 8 | 170 | 11 | 163 | 4.20e-20 | 84.7 |
MS.gene064328.t1 | MTR_2g005500 | 28.814 | 177 | 109 | 6 | 1 | 172 | 1 | 165 | 4.98e-20 | 84.3 |
MS.gene064328.t1 | MTR_2g096550 | 28.947 | 190 | 120 | 6 | 6 | 191 | 15 | 193 | 5.32e-20 | 84.3 |
MS.gene064328.t1 | MTR_3g087160 | 34.545 | 165 | 94 | 5 | 8 | 170 | 11 | 163 | 5.47e-20 | 84.3 |
MS.gene064328.t1 | MTR_2g083860 | 36.364 | 121 | 74 | 3 | 6 | 124 | 13 | 132 | 7.01e-20 | 84.3 |
MS.gene064328.t1 | MTR_8g089985 | 29.412 | 187 | 118 | 5 | 8 | 192 | 19 | 193 | 7.84e-20 | 84.3 |
MS.gene064328.t1 | MTR_4g079350 | 37.500 | 128 | 77 | 3 | 6 | 131 | 13 | 139 | 8.74e-20 | 84.0 |
MS.gene064328.t1 | MTR_8g027220 | 38.971 | 136 | 73 | 5 | 8 | 134 | 28 | 162 | 1.34e-19 | 84.0 |
MS.gene064328.t1 | MTR_3g086980 | 28.877 | 187 | 119 | 5 | 8 | 192 | 18 | 192 | 1.54e-19 | 83.6 |
MS.gene064328.t1 | MTR_2g005510 | 30.435 | 184 | 114 | 5 | 6 | 187 | 15 | 186 | 2.71e-19 | 82.8 |
MS.gene064328.t1 | MTR_4g088090 | 36.290 | 124 | 76 | 3 | 6 | 127 | 13 | 135 | 2.90e-19 | 82.4 |
MS.gene064328.t1 | MTR_8g036220 | 30.526 | 190 | 118 | 5 | 6 | 193 | 16 | 193 | 2.94e-19 | 82.8 |
MS.gene064328.t1 | MTR_1g068740 | 33.077 | 130 | 84 | 3 | 6 | 133 | 15 | 143 | 2.97e-19 | 82.0 |
MS.gene064328.t1 | MTR_1g068730 | 34.146 | 123 | 78 | 3 | 6 | 126 | 15 | 136 | 3.11e-19 | 81.3 |
MS.gene064328.t1 | MTR_2g075950 | 36.364 | 121 | 74 | 3 | 6 | 124 | 13 | 132 | 3.69e-19 | 82.4 |
MS.gene064328.t1 | MTR_2g014990 | 30.270 | 185 | 113 | 6 | 6 | 187 | 13 | 184 | 4.79e-19 | 82.0 |
MS.gene064328.t1 | MTR_7g117910 | 37.302 | 126 | 76 | 3 | 8 | 131 | 22 | 146 | 5.89e-19 | 81.6 |
MS.gene064328.t1 | MTR_3g064390 | 31.138 | 167 | 97 | 5 | 8 | 170 | 12 | 164 | 1.23e-18 | 80.5 |
MS.gene064328.t1 | MTR_5g076590 | 30.539 | 167 | 98 | 5 | 8 | 170 | 12 | 164 | 1.75e-18 | 80.1 |
MS.gene064328.t1 | MTR_1g052475 | 37.607 | 117 | 70 | 3 | 8 | 122 | 17 | 132 | 3.33e-18 | 79.7 |
MS.gene064328.t1 | MTR_8g092020 | 28.986 | 207 | 123 | 6 | 6 | 198 | 12 | 208 | 4.24e-18 | 79.3 |
MS.gene064328.t1 | MTR_8g093740 | 32.117 | 137 | 80 | 3 | 47 | 181 | 21 | 146 | 4.47e-18 | 78.6 |
MS.gene064328.t1 | MTR_1g097420 | 29.442 | 197 | 115 | 6 | 17 | 198 | 46 | 233 | 5.55e-18 | 79.3 |
MS.gene064328.t1 | MTR_3g096350 | 33.898 | 118 | 74 | 3 | 7 | 121 | 13 | 129 | 7.84e-18 | 77.4 |
MS.gene064328.t1 | MTR_3g096350 | 33.898 | 118 | 74 | 3 | 7 | 121 | 13 | 129 | 8.49e-18 | 77.0 |
MS.gene064328.t1 | MTR_2g102060 | 29.697 | 165 | 102 | 5 | 8 | 170 | 12 | 164 | 1.03e-17 | 78.2 |
MS.gene064328.t1 | MTR_8g107070 | 30.108 | 186 | 116 | 5 | 6 | 189 | 14 | 187 | 1.14e-17 | 79.3 |
MS.gene064328.t1 | MTR_0262s0050 | 37.607 | 117 | 70 | 3 | 8 | 122 | 17 | 132 | 1.27e-17 | 78.2 |
MS.gene064328.t1 | MTR_7g051940 | 29.834 | 181 | 113 | 5 | 6 | 184 | 13 | 181 | 1.66e-17 | 77.8 |
MS.gene064328.t1 | MTR_1g078200 | 28.421 | 190 | 122 | 5 | 6 | 193 | 14 | 191 | 3.14e-17 | 77.4 |
MS.gene064328.t1 | MTR_3g064390 | 34.959 | 123 | 73 | 4 | 8 | 126 | 12 | 131 | 3.61e-17 | 75.5 |
MS.gene064328.t1 | MTR_6g079550 | 27.979 | 193 | 125 | 5 | 6 | 196 | 12 | 192 | 9.15e-17 | 75.9 |
MS.gene064328.t1 | MTR_7g103070 | 31.387 | 137 | 81 | 3 | 47 | 181 | 2 | 127 | 9.39e-17 | 74.3 |
MS.gene064328.t1 | MTR_7g405790 | 27.586 | 203 | 133 | 5 | 6 | 206 | 15 | 205 | 9.41e-17 | 75.9 |
MS.gene064328.t1 | MTR_2g090865 | 35.537 | 121 | 75 | 3 | 6 | 124 | 11 | 130 | 3.41e-15 | 71.6 |
MS.gene064328.t1 | MTR_4g099470 | 32.609 | 138 | 79 | 5 | 35 | 170 | 13 | 138 | 4.65e-15 | 70.5 |
MS.gene064328.t1 | MTR_3g107717 | 33.051 | 118 | 77 | 2 | 7 | 123 | 14 | 130 | 6.32e-14 | 68.2 |
MS.gene064328.t1 | MTR_3g107713 | 33.051 | 118 | 77 | 2 | 7 | 123 | 14 | 130 | 6.52e-14 | 68.2 |
MS.gene064328.t1 | MTR_3g107707 | 33.051 | 118 | 77 | 2 | 7 | 123 | 14 | 130 | 6.86e-14 | 68.2 |
MS.gene064328.t1 | MTR_6g039490 | 24.757 | 206 | 133 | 5 | 6 | 198 | 8 | 204 | 1.04e-13 | 67.8 |
MS.gene064328.t1 | MTR_1g072280 | 27.684 | 177 | 118 | 4 | 5 | 180 | 11 | 178 | 4.55e-12 | 64.7 |
MS.gene064328.t1 | MTR_7g094810 | 26.738 | 187 | 103 | 3 | 7 | 180 | 9 | 174 | 8.91e-12 | 63.9 |
MS.gene064328.t1 | MTR_7g094810 | 26.738 | 187 | 103 | 3 | 7 | 180 | 9 | 174 | 9.15e-12 | 63.9 |
MS.gene064328.t1 | MTR_7g094810 | 26.738 | 187 | 103 | 3 | 7 | 180 | 9 | 174 | 9.25e-12 | 63.5 |
MS.gene064328.t1 | MTR_7g094810 | 26.738 | 187 | 103 | 3 | 7 | 180 | 9 | 174 | 1.06e-11 | 63.5 |
MS.gene064328.t1 | MTR_7g094810 | 26.738 | 187 | 103 | 3 | 7 | 180 | 9 | 174 | 1.07e-11 | 63.5 |
MS.gene064328.t1 | MTR_1g082870 | 27.011 | 174 | 119 | 3 | 7 | 180 | 17 | 182 | 7.33e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064328.t1 | AT4G28950 | 91.429 | 210 | 15 | 2 | 1 | 209 | 1 | 208 | 2.30e-142 | 395 |
MS.gene064328.t1 | AT3G48040 | 77.451 | 204 | 45 | 1 | 2 | 205 | 4 | 206 | 2.41e-114 | 325 |
MS.gene064328.t1 | AT5G62880 | 82.682 | 179 | 31 | 0 | 2 | 180 | 4 | 182 | 1.01e-111 | 318 |
MS.gene064328.t1 | AT4G35020 | 79.558 | 181 | 37 | 0 | 1 | 181 | 1 | 181 | 1.36e-109 | 312 |
MS.gene064328.t1 | AT4G35020 | 79.558 | 181 | 37 | 0 | 1 | 181 | 1 | 181 | 1.36e-109 | 312 |
MS.gene064328.t1 | AT4G35020 | 79.558 | 181 | 37 | 0 | 1 | 181 | 1 | 181 | 1.36e-109 | 312 |
MS.gene064328.t1 | AT3G51300 | 80.337 | 178 | 35 | 0 | 1 | 178 | 1 | 178 | 1.11e-107 | 307 |
MS.gene064328.t1 | AT1G75840 | 80.337 | 178 | 35 | 0 | 1 | 178 | 1 | 178 | 1.62e-106 | 304 |
MS.gene064328.t1 | AT5G45970 | 78.212 | 179 | 39 | 0 | 1 | 179 | 1 | 179 | 2.00e-106 | 304 |
MS.gene064328.t1 | AT1G20090 | 80.114 | 176 | 35 | 0 | 3 | 178 | 2 | 177 | 8.03e-106 | 303 |
MS.gene064328.t1 | AT2G17800 | 79.213 | 178 | 37 | 0 | 1 | 178 | 1 | 178 | 1.24e-105 | 302 |
MS.gene064328.t1 | AT2G17800 | 79.213 | 178 | 37 | 0 | 1 | 178 | 1 | 178 | 1.24e-105 | 302 |
MS.gene064328.t1 | AT4G35950 | 78.090 | 178 | 39 | 0 | 1 | 178 | 1 | 178 | 2.28e-104 | 299 |
MS.gene064328.t1 | AT5G62880 | 82.036 | 167 | 30 | 0 | 2 | 168 | 4 | 170 | 9.77e-103 | 295 |
MS.gene064328.t1 | AT3G48040 | 83.436 | 163 | 27 | 0 | 2 | 164 | 4 | 166 | 2.49e-102 | 293 |
MS.gene064328.t1 | AT2G44690 | 70.256 | 195 | 54 | 1 | 6 | 200 | 18 | 208 | 8.08e-99 | 285 |
MS.gene064328.t1 | AT3G51290 | 79.310 | 145 | 30 | 0 | 34 | 178 | 635 | 779 | 5.85e-79 | 251 |
MS.gene064328.t1 | AT4G35020 | 83.333 | 120 | 20 | 0 | 1 | 120 | 1 | 120 | 8.82e-74 | 220 |
MS.gene064328.t1 | AT4G35020 | 83.333 | 120 | 20 | 0 | 1 | 120 | 1 | 120 | 8.82e-74 | 220 |
MS.gene064328.t1 | AT4G35860 | 33.889 | 180 | 104 | 6 | 1 | 177 | 1 | 168 | 1.19e-26 | 102 |
MS.gene064328.t1 | AT3G54840 | 33.898 | 177 | 102 | 6 | 7 | 180 | 34 | 198 | 2.57e-24 | 95.5 |
MS.gene064328.t1 | AT4G17170 | 32.558 | 172 | 102 | 5 | 1 | 170 | 1 | 160 | 2.58e-24 | 95.9 |
MS.gene064328.t1 | AT3G54840 | 34.524 | 168 | 95 | 6 | 7 | 171 | 34 | 189 | 3.82e-24 | 94.7 |
MS.gene064328.t1 | AT3G54840 | 33.714 | 175 | 101 | 6 | 9 | 180 | 2 | 164 | 1.37e-23 | 92.8 |
MS.gene064328.t1 | AT5G03530 | 30.097 | 206 | 116 | 8 | 8 | 197 | 15 | 208 | 1.71e-23 | 93.6 |
MS.gene064328.t1 | AT5G03530 | 30.097 | 206 | 116 | 8 | 8 | 197 | 15 | 208 | 1.71e-23 | 93.6 |
MS.gene064328.t1 | AT3G46060 | 31.737 | 167 | 101 | 5 | 6 | 170 | 15 | 170 | 1.95e-23 | 93.6 |
MS.gene064328.t1 | AT3G46060 | 31.737 | 167 | 101 | 5 | 6 | 170 | 15 | 170 | 1.95e-23 | 93.6 |
MS.gene064328.t1 | AT3G46060 | 31.737 | 167 | 101 | 5 | 6 | 170 | 15 | 170 | 1.95e-23 | 93.6 |
MS.gene064328.t1 | AT5G45130 | 34.731 | 167 | 91 | 5 | 8 | 170 | 12 | 164 | 3.55e-23 | 92.4 |
MS.gene064328.t1 | AT4G39890 | 35.542 | 166 | 92 | 5 | 8 | 170 | 11 | 164 | 3.79e-23 | 92.8 |
MS.gene064328.t1 | AT5G59840 | 30.682 | 176 | 109 | 5 | 6 | 179 | 15 | 179 | 6.09e-23 | 92.4 |
MS.gene064328.t1 | AT4G17160 | 30.814 | 172 | 105 | 5 | 1 | 170 | 1 | 160 | 1.14e-22 | 91.3 |
MS.gene064328.t1 | AT1G73640 | 35.928 | 167 | 93 | 5 | 6 | 170 | 13 | 167 | 2.32e-22 | 91.3 |
MS.gene064328.t1 | AT3G53610 | 30.114 | 176 | 110 | 5 | 6 | 179 | 15 | 179 | 2.47e-22 | 90.9 |
MS.gene064328.t1 | AT3G53610 | 30.114 | 176 | 110 | 5 | 6 | 179 | 15 | 179 | 2.47e-22 | 90.9 |
MS.gene064328.t1 | AT3G53610 | 30.114 | 176 | 110 | 5 | 6 | 179 | 15 | 179 | 2.47e-22 | 90.9 |
MS.gene064328.t1 | AT1G02130 | 32.335 | 167 | 99 | 5 | 6 | 170 | 8 | 162 | 2.49e-22 | 90.5 |
MS.gene064328.t1 | AT5G45130 | 34.545 | 165 | 90 | 5 | 10 | 170 | 22 | 172 | 3.25e-22 | 90.1 |
MS.gene064328.t1 | AT1G22740 | 30.392 | 204 | 122 | 6 | 6 | 198 | 8 | 202 | 4.13e-22 | 89.7 |
MS.gene064328.t1 | AT1G43890 | 29.050 | 179 | 112 | 5 | 6 | 181 | 13 | 179 | 4.19e-22 | 90.1 |
MS.gene064328.t1 | AT1G43890 | 29.050 | 179 | 112 | 5 | 6 | 181 | 13 | 179 | 4.19e-22 | 90.1 |
MS.gene064328.t1 | AT1G43890 | 29.050 | 179 | 112 | 5 | 6 | 181 | 13 | 179 | 4.19e-22 | 90.1 |
MS.gene064328.t1 | AT3G18820 | 30.583 | 206 | 120 | 6 | 6 | 197 | 8 | 204 | 6.04e-22 | 89.4 |
MS.gene064328.t1 | AT4G19640 | 33.533 | 167 | 93 | 5 | 8 | 170 | 12 | 164 | 9.78e-22 | 88.6 |
MS.gene064328.t1 | AT4G17530 | 29.902 | 204 | 119 | 8 | 6 | 197 | 8 | 199 | 1.61e-21 | 88.2 |
MS.gene064328.t1 | AT1G16920 | 38.843 | 121 | 71 | 3 | 6 | 124 | 13 | 132 | 2.37e-21 | 88.2 |
MS.gene064328.t1 | AT5G47200 | 29.902 | 204 | 119 | 8 | 6 | 197 | 8 | 199 | 2.45e-21 | 87.8 |
MS.gene064328.t1 | AT1G07410 | 31.551 | 187 | 114 | 6 | 6 | 190 | 12 | 186 | 2.66e-21 | 87.8 |
MS.gene064328.t1 | AT1G18200 | 33.333 | 171 | 100 | 5 | 6 | 174 | 13 | 171 | 5.51e-21 | 87.4 |
MS.gene064328.t1 | AT3G11730 | 30.178 | 169 | 104 | 5 | 6 | 172 | 8 | 164 | 7.40e-21 | 86.7 |
MS.gene064328.t1 | AT5G59150 | 33.149 | 181 | 107 | 6 | 6 | 184 | 12 | 180 | 1.12e-20 | 86.3 |
MS.gene064328.t1 | AT3G16100 | 31.401 | 207 | 119 | 7 | 6 | 198 | 8 | 205 | 1.22e-20 | 85.9 |
MS.gene064328.t1 | AT2G22290 | 35.152 | 165 | 93 | 5 | 8 | 170 | 11 | 163 | 3.50e-20 | 84.7 |
MS.gene064328.t1 | AT5G45750 | 28.638 | 213 | 129 | 6 | 6 | 207 | 13 | 213 | 5.16e-20 | 84.7 |
MS.gene064328.t1 | AT5G64990 | 34.545 | 165 | 94 | 5 | 8 | 170 | 9 | 161 | 5.66e-20 | 84.3 |
MS.gene064328.t1 | AT3G09900 | 31.818 | 176 | 107 | 5 | 6 | 179 | 15 | 179 | 6.15e-20 | 84.3 |
MS.gene064328.t1 | AT4G18430 | 39.516 | 124 | 72 | 3 | 6 | 127 | 13 | 135 | 6.42e-20 | 84.3 |
MS.gene064328.t1 | AT1G52280 | 30.097 | 206 | 121 | 7 | 6 | 197 | 8 | 204 | 6.56e-20 | 84.0 |
MS.gene064328.t1 | AT5G03520 | 32.386 | 176 | 106 | 5 | 6 | 179 | 15 | 179 | 8.35e-20 | 84.0 |
MS.gene064328.t1 | AT3G46830 | 29.834 | 181 | 113 | 5 | 6 | 184 | 12 | 180 | 9.35e-20 | 84.0 |
MS.gene064328.t1 | AT3G46830 | 29.834 | 181 | 113 | 5 | 6 | 184 | 12 | 180 | 9.35e-20 | 84.0 |
MS.gene064328.t1 | AT1G09630 | 31.522 | 184 | 112 | 5 | 6 | 187 | 12 | 183 | 1.16e-19 | 83.6 |
MS.gene064328.t1 | AT3G15060 | 38.525 | 122 | 72 | 3 | 8 | 127 | 15 | 135 | 1.24e-19 | 83.6 |
MS.gene064328.t1 | AT5G60860 | 29.891 | 184 | 115 | 4 | 6 | 187 | 13 | 184 | 1.53e-19 | 83.2 |
MS.gene064328.t1 | AT2G44610 | 33.939 | 165 | 95 | 4 | 8 | 170 | 11 | 163 | 1.97e-19 | 82.8 |
MS.gene064328.t1 | AT4G18800 | 29.348 | 184 | 116 | 5 | 6 | 187 | 13 | 184 | 2.53e-19 | 82.8 |
MS.gene064328.t1 | AT5G65270 | 28.723 | 188 | 120 | 5 | 8 | 193 | 19 | 194 | 3.31e-19 | 82.8 |
MS.gene064328.t1 | AT1G06400 | 36.364 | 121 | 74 | 3 | 6 | 124 | 13 | 132 | 3.56e-19 | 82.4 |
MS.gene064328.t1 | AT4G19640 | 34.483 | 145 | 87 | 5 | 8 | 147 | 12 | 153 | 4.98e-19 | 81.3 |
MS.gene064328.t1 | AT2G21880 | 30.270 | 185 | 114 | 5 | 6 | 184 | 9 | 184 | 6.10e-19 | 81.6 |
MS.gene064328.t1 | AT5G10260 | 33.333 | 165 | 96 | 5 | 8 | 170 | 11 | 163 | 7.90e-19 | 81.3 |
MS.gene064328.t1 | AT5G47520 | 28.000 | 200 | 130 | 5 | 2 | 199 | 10 | 197 | 7.94e-19 | 81.6 |
MS.gene064328.t1 | AT4G19640 | 35.938 | 128 | 75 | 4 | 8 | 131 | 12 | 136 | 8.01e-19 | 79.7 |
MS.gene064328.t1 | AT3G12160 | 38.462 | 117 | 69 | 3 | 8 | 122 | 17 | 132 | 1.28e-18 | 80.9 |
MS.gene064328.t1 | AT1G28550 | 37.903 | 124 | 74 | 3 | 6 | 127 | 13 | 135 | 1.36e-18 | 80.9 |
MS.gene064328.t1 | AT1G49300 | 29.126 | 206 | 123 | 6 | 6 | 197 | 8 | 204 | 1.49e-18 | 80.5 |
MS.gene064328.t1 | AT1G49300 | 29.126 | 206 | 123 | 6 | 6 | 197 | 8 | 204 | 1.49e-18 | 80.5 |
MS.gene064328.t1 | AT2G31680 | 30.055 | 183 | 114 | 5 | 6 | 186 | 12 | 182 | 1.69e-18 | 80.5 |
MS.gene064328.t1 | AT4G39990 | 27.624 | 181 | 117 | 5 | 8 | 186 | 19 | 187 | 1.72e-18 | 80.9 |
MS.gene064328.t1 | AT2G43130 | 29.508 | 183 | 115 | 5 | 6 | 186 | 12 | 182 | 2.48e-18 | 80.1 |
MS.gene064328.t1 | AT2G33870 | 37.903 | 124 | 74 | 3 | 6 | 127 | 13 | 135 | 3.19e-18 | 79.7 |
MS.gene064328.t1 | AT4G35860 | 34.586 | 133 | 73 | 5 | 47 | 177 | 2 | 122 | 4.25e-18 | 78.2 |
MS.gene064328.t1 | AT4G09720 | 28.342 | 187 | 119 | 5 | 6 | 186 | 8 | 185 | 4.37e-18 | 79.3 |
MS.gene064328.t1 | AT1G05810 | 29.508 | 183 | 115 | 5 | 6 | 186 | 12 | 182 | 5.58e-18 | 79.3 |
MS.gene064328.t1 | AT4G09720 | 27.604 | 192 | 119 | 4 | 6 | 186 | 8 | 190 | 5.80e-18 | 79.0 |
MS.gene064328.t1 | AT1G05810 | 29.508 | 183 | 115 | 5 | 6 | 186 | 58 | 228 | 8.07e-18 | 79.7 |
MS.gene064328.t1 | AT5G64990 | 33.140 | 172 | 94 | 6 | 8 | 170 | 9 | 168 | 2.37e-17 | 77.4 |
MS.gene064328.t1 | AT5G47960 | 35.897 | 117 | 72 | 3 | 8 | 122 | 17 | 132 | 3.69e-17 | 77.0 |
MS.gene064328.t1 | AT4G09720 | 26.768 | 198 | 119 | 4 | 6 | 186 | 8 | 196 | 4.31e-17 | 76.6 |
MS.gene064328.t1 | AT1G01200 | 37.607 | 117 | 70 | 3 | 8 | 122 | 30 | 145 | 6.59e-17 | 76.6 |
MS.gene064328.t1 | AT3G07410 | 29.282 | 181 | 114 | 5 | 6 | 184 | 12 | 180 | 2.07e-16 | 75.1 |
MS.gene064328.t1 | AT5G55080 | 30.909 | 165 | 99 | 5 | 7 | 170 | 14 | 164 | 3.43e-16 | 74.3 |
MS.gene064328.t1 | AT5G27540 | 25.843 | 178 | 124 | 3 | 3 | 180 | 14 | 183 | 1.26e-15 | 75.1 |
MS.gene064328.t1 | AT5G27540 | 25.843 | 178 | 124 | 3 | 3 | 180 | 14 | 183 | 1.26e-15 | 75.1 |
MS.gene064328.t1 | AT3G09910 | 28.571 | 182 | 114 | 6 | 8 | 185 | 15 | 184 | 5.32e-15 | 70.9 |
MS.gene064328.t1 | AT3G09910 | 28.571 | 182 | 114 | 6 | 8 | 185 | 15 | 184 | 5.32e-15 | 70.9 |
MS.gene064328.t1 | AT3G09910 | 28.571 | 182 | 114 | 6 | 8 | 185 | 15 | 184 | 5.32e-15 | 70.9 |
MS.gene064328.t1 | AT5G03520 | 32.090 | 134 | 79 | 4 | 47 | 179 | 47 | 169 | 2.03e-14 | 69.3 |
MS.gene064328.t1 | AT3G09910 | 29.480 | 173 | 106 | 6 | 8 | 176 | 15 | 175 | 2.63e-14 | 68.9 |
MS.gene064328.t1 | AT3G09910 | 29.480 | 173 | 106 | 6 | 8 | 176 | 15 | 175 | 2.63e-14 | 68.9 |
MS.gene064328.t1 | AT5G59150 | 33.094 | 139 | 80 | 5 | 47 | 184 | 3 | 129 | 3.68e-14 | 67.8 |
MS.gene064328.t1 | AT5G20020 | 33.051 | 118 | 77 | 2 | 7 | 123 | 14 | 130 | 4.15e-14 | 68.9 |
MS.gene064328.t1 | AT5G55190 | 33.051 | 118 | 77 | 2 | 7 | 123 | 14 | 130 | 5.30e-14 | 68.6 |
MS.gene064328.t1 | AT5G20010 | 33.051 | 118 | 77 | 2 | 7 | 123 | 14 | 130 | 6.30e-14 | 68.2 |
MS.gene064328.t1 | AT3G63150 | 28.571 | 175 | 115 | 5 | 7 | 180 | 15 | 180 | 2.22e-13 | 68.6 |
MS.gene064328.t1 | AT2G21880 | 29.697 | 165 | 101 | 5 | 26 | 184 | 4 | 159 | 3.44e-13 | 65.9 |
MS.gene064328.t1 | AT2G21880 | 29.697 | 165 | 101 | 5 | 26 | 184 | 4 | 159 | 3.44e-13 | 65.9 |
Find 47 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATGGAAGCATTGTGAATT+TGG | 0.222822 | 6.1:-76732977 | MS.gene064328:CDS |
ACAAGAACAATTGGTACATT+AGG | 0.278025 | 6.1:+76731434 | None:intergenic |
CTTGGCATTTCTTTCCTCCT+TGG | 0.280179 | 6.1:+76730801 | None:intergenic |
GCATTGTGAATTTGGGACTA+TGG | 0.282030 | 6.1:-76732969 | MS.gene064328:CDS |
CAAGAACAATTGGTACATTA+GGG | 0.336893 | 6.1:+76731435 | None:intergenic |
TACAGTGGGAAATTTGTTAC+TGG | 0.337151 | 6.1:+76733646 | None:intergenic |
GAAGAACTGAGGAAACAAAT+TGG | 0.341763 | 6.1:-76731034 | MS.gene064328:CDS |
AATGTACCAATTGTTCTTGT+TGG | 0.346567 | 6.1:-76731431 | MS.gene064328:CDS |
GGGGCGAATCTACGCAATTC+TGG | 0.349508 | 6.1:+76731455 | None:intergenic |
TCAACCTGCTATAATCTTCT+TGG | 0.373752 | 6.1:+76732803 | None:intergenic |
GGCATTTCTTTCCTCCTTGG+AGG | 0.381404 | 6.1:+76730804 | None:intergenic |
AGGTTGAAGAACAACCTTAA+TGG | 0.384098 | 6.1:+76730824 | None:intergenic |
TTTGTACCAACAAGAACAAT+TGG | 0.404206 | 6.1:+76731425 | None:intergenic |
TGTTCTTGTTGGTACAAAGT+TGG | 0.419030 | 6.1:-76731420 | MS.gene064328:CDS |
AAGAACTGAGGAAACAAATT+GGG | 0.422553 | 6.1:-76731033 | MS.gene064328:CDS |
GTTCTTGTTGGTACAAAGTT+GGG | 0.423240 | 6.1:-76731419 | MS.gene064328:intron |
CTATGAAAATGTTCTTAAGA+AGG | 0.449203 | 6.1:-76732716 | MS.gene064328:intron |
TTGAGGCCACTGAGCTATAG+AGG | 0.451519 | 6.1:-76732784 | MS.gene064328:CDS |
CACTTACACAAACGAGCAAC+CGG | 0.459245 | 6.1:+76730758 | None:intergenic |
AAGAAATGCCAAGGAAGAAA+AGG | 0.469586 | 6.1:-76730791 | MS.gene064328:CDS |
GATGGAAGCATTGTGAATTT+GGG | 0.471347 | 6.1:-76732976 | MS.gene064328:CDS |
CATTGTGAATTTGGGACTAT+GGG | 0.489001 | 6.1:-76732968 | MS.gene064328:CDS |
TGGATATTTCGCTGATCACA+CGG | 0.507522 | 6.1:-76731275 | MS.gene064328:CDS |
GTGCAGCTCGAAGACTCAAC+AGG | 0.511942 | 6.1:-76730993 | MS.gene064328:intron |
TACCACAGGGGTATTGTGTG+TGG | 0.519310 | 6.1:-76729985 | MS.gene064328:intron |
CAGGCCAAGAAGATTATAGC+AGG | 0.520528 | 6.1:-76732807 | MS.gene064328:CDS |
CAAGGAAGAAAAGGCAAAGA+AGG | 0.532454 | 6.1:-76730782 | MS.gene064328:CDS |
ACTGTTGGTGATGGTGCTGT+TGG | 0.537659 | 6.1:-76733695 | MS.gene064328:CDS |
AAGAAAAGGCAAAGAAGGTC+CGG | 0.538145 | 6.1:-76730777 | MS.gene064328:CDS |
TTCATTAAATGTGTCACTGT+TGG | 0.541909 | 6.1:-76733710 | MS.gene064328:CDS |
AGGTTGTTCTTCAACCTCCA+AGG | 0.567491 | 6.1:-76730818 | MS.gene064328:CDS |
CTAAAATTATCAAATACTGT+TGG | 0.567683 | 6.1:+76733015 | None:intergenic |
AGTGCAAATGTAGCTGTGGA+TGG | 0.578876 | 6.1:-76732994 | MS.gene064328:CDS |
AAGAAGATTATAGCAGGTTG+AGG | 0.589934 | 6.1:-76732801 | MS.gene064328:CDS |
AAATGTGTCACTGTTGGTGA+TGG | 0.594720 | 6.1:-76733704 | MS.gene064328:CDS |
CACAGGGGTATTGTGTGTGG+AGG | 0.605217 | 6.1:-76729982 | MS.gene064328:intron |
CAAGGAGGAAAGAAATGCCA+AGG | 0.611296 | 6.1:-76730800 | MS.gene064328:CDS |
TTGGGACTATGGGACACTGC+AGG | 0.615110 | 6.1:-76732958 | MS.gene064328:intron |
GGATATTTCGCTGATCACAC+GGG | 0.622383 | 6.1:-76731274 | MS.gene064328:CDS |
TAATGTTATAACATCTGCTG+AGG | 0.624985 | 6.1:-76731248 | MS.gene064328:intron |
TTAGATCTTCGTGAAGATCG+TGG | 0.626265 | 6.1:-76731295 | MS.gene064328:intron |
AGAACTGAGGAAACAAATTG+GGG | 0.675214 | 6.1:-76731032 | MS.gene064328:CDS |
CTTTGTAGGGAGAAGAACTG+AGG | 0.678121 | 6.1:-76731045 | MS.gene064328:intron |
TTGTTCTTCAACCTCCAAGG+AGG | 0.684078 | 6.1:-76730815 | MS.gene064328:CDS |
TCTGCTCCTCTATAGCTCAG+TGG | 0.686899 | 6.1:+76732778 | None:intergenic |
AAGAACAATTGGTACATTAG+GGG | 0.696220 | 6.1:+76731436 | None:intergenic |
GCTGCACTCAATGTACGCTG+CGG | 0.739612 | 6.1:+76731009 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTAATTTTT+GGG | - | chr6.1:76730641-76730660 | MS.gene064328:intron | 0.0% |
!!! | TTTTTTTTTTTTTTAATTTT+TGG | - | chr6.1:76730640-76730659 | MS.gene064328:intron | 0.0% |
!! | AAAGATCAAAAATTAAAAAA+AGG | + | chr6.1:76730128-76730147 | None:intergenic | 10.0% |
!! | AAGATCAAAAATTAAAAAAA+GGG | + | chr6.1:76730127-76730146 | None:intergenic | 10.0% |
!! | AATTATCAAATAAATTGATA+GGG | - | chr6.1:76731655-76731674 | MS.gene064328:intron | 10.0% |
!! | ATTATAAAAATTACAGAAAT+AGG | + | chr6.1:76731993-76732012 | None:intergenic | 10.0% |
!! | TAATTATCAAATAAATTGAT+AGG | - | chr6.1:76731654-76731673 | MS.gene064328:intron | 10.0% |
!! | TAGGAAATTTATATAATATA+TGG | + | chr6.1:76730094-76730113 | None:intergenic | 10.0% |
!!! | AAAATTTATTGATTAGAAAA+AGG | - | chr6.1:76730803-76730822 | MS.gene064328:CDS | 10.0% |
!!! | ACATTTTTTATAAACTTTTT+CGG | - | chr6.1:76730258-76730277 | MS.gene064328:intron | 10.0% |
!!! | ATTTTTTACTTTTATTATTC+TGG | - | chr6.1:76732318-76732337 | MS.gene064328:intron | 10.0% |
!! | AATGTAATCTTAAACATAAA+TGG | - | chr6.1:76731818-76731837 | MS.gene064328:intron | 15.0% |
!! | AGATCAAAAATTAAAAAAAG+GGG | + | chr6.1:76730126-76730145 | None:intergenic | 15.0% |
!! | ATAAGTTAATAATAGCAAAT+AGG | + | chr6.1:76733375-76733394 | None:intergenic | 15.0% |
!! | ATGATTCAATTTCAAATAAT+AGG | + | chr6.1:76732974-76732993 | None:intergenic | 15.0% |
!! | ATGTAATCTTAAACATAAAT+GGG | - | chr6.1:76731819-76731838 | MS.gene064328:intron | 15.0% |
!! | TATTTATTATGGTTTCAAAT+AGG | + | chr6.1:76731632-76731651 | None:intergenic | 15.0% |
!! | TGCTATTATTAACTTATATT+AGG | - | chr6.1:76733378-76733397 | MS.gene064328:intron | 15.0% |
!!! | ATTTTCTTTTTGTTGAAAAA+AGG | + | chr6.1:76730788-76730807 | None:intergenic | 15.0% |
!!! | CATTTTCTTTAAATTAGTTA+TGG | + | chr6.1:76733304-76733323 | None:intergenic | 15.0% |
!!! | TTTTTAACAGTTCTAATATT+CGG | + | chr6.1:76733427-76733446 | None:intergenic | 15.0% |
!! | AAAAAGAAGAAAAATTACAG+TGG | + | chr6.1:76730066-76730085 | None:intergenic | 20.0% |
!! | AAAAGAAGAAAAATTACAGT+GGG | + | chr6.1:76730065-76730084 | None:intergenic | 20.0% |
!! | AAATTAGTTATGGTTTGATT+CGG | + | chr6.1:76733294-76733313 | None:intergenic | 20.0% |
!! | CAAACTTTACCTTTATAAAT+AGG | - | chr6.1:76731862-76731881 | MS.gene064328:intron | 20.0% |
!! | CATAAACACTTATATGATAA+TGG | - | chr6.1:76731315-76731334 | MS.gene064328:intron | 20.0% |
!! | CTAAAATTATCAAATACTGT+TGG | + | chr6.1:76730682-76730701 | None:intergenic | 20.0% |
!! | CTCATAACTTTATATGAAAA+CGG | - | chr6.1:76731252-76731271 | MS.gene064328:CDS | 20.0% |
!! | GATTAGAAAAAGGAAAAAAA+AGG | - | chr6.1:76730813-76730832 | MS.gene064328:CDS | 20.0% |
!! | TAAACAAGTTAATCTTTGTA+GGG | - | chr6.1:76732636-76732655 | MS.gene064328:intron | 20.0% |
!! | TCTAAATATGTTAATGTTAC+TGG | - | chr6.1:76730617-76730636 | MS.gene064328:intron | 20.0% |
!! | TGAATAGTATATACAGTTTA+TGG | - | chr6.1:76733085-76733104 | MS.gene064328:intron | 20.0% |
!! | TGATCACTTATACTAATATA+AGG | - | chr6.1:76730474-76730493 | MS.gene064328:intron | 20.0% |
!! | TGTAATCTTAAACATAAATG+GGG | - | chr6.1:76731820-76731839 | MS.gene064328:intron | 20.0% |
!! | TTAAACAAGTTAATCTTTGT+AGG | - | chr6.1:76732635-76732654 | MS.gene064328:intron | 20.0% |
!! | TTTCATAAATTCTTCAAGAT+AGG | - | chr6.1:76730286-76730305 | MS.gene064328:intron | 20.0% |
!!! | AAAAAAGGGGAATTTTTTTT+AGG | + | chr6.1:76730113-76730132 | None:intergenic | 20.0% |
!!! | AAAAGAAAAGGTATTATAAG+AGG | + | chr6.1:76731029-76731048 | None:intergenic | 20.0% |
!!! | CATGTTACTTTTAACTATTT+TGG | - | chr6.1:76733570-76733589 | MS.gene064328:intron | 20.0% |
!!! | TAAATTTGACAACACATTTT+TGG | - | chr6.1:76731890-76731909 | MS.gene064328:intron | 20.0% |
!!! | TATGATTTTTGATTTGTGTA+AGG | - | chr6.1:76730547-76730566 | MS.gene064328:intron | 20.0% |
!!! | TTTTCTCTTGTTTCTATTTT+TGG | - | chr6.1:76731060-76731079 | MS.gene064328:intron | 20.0% |
!!! | TTTTTTTTTTCAATGTTTGC+AGG | - | chr6.1:76730868-76730887 | MS.gene064328:intron | 20.0% |
! | AATATATACTATGAGCTAGT+TGG | - | chr6.1:76730176-76730195 | MS.gene064328:intron | 25.0% |
! | AATCAGTTCAGTTTGAATAT+AGG | + | chr6.1:76733334-76733353 | None:intergenic | 25.0% |
! | AATTAAGCACATGATAACAT+TGG | + | chr6.1:76730512-76730531 | None:intergenic | 25.0% |
! | AGTAAGGAAATTAGATTGTT+CGG | - | chr6.1:76733120-76733139 | MS.gene064328:intron | 25.0% |
! | CTATGAAAATGTTCTTAAGA+AGG | - | chr6.1:76730978-76730997 | MS.gene064328:intron | 25.0% |
! | TGAATCATACTTCAAATGAT+TGG | - | chr6.1:76732986-76733005 | MS.gene064328:CDS | 25.0% |
! | TTTAGTGCACCTATTTATAA+AGG | + | chr6.1:76731874-76731893 | None:intergenic | 25.0% |
!! | TCTGAAATTATTTGATGTGT+TGG | - | chr6.1:76732570-76732589 | MS.gene064328:intron | 25.0% |
!!! | AGGTACTTAAAACTTTGTTT+TGG | - | chr6.1:76730756-76730775 | MS.gene064328:intron | 25.0% |
!!! | ATGGAGATTTTTTAACAGTA+AGG | - | chr6.1:76733104-76733123 | MS.gene064328:intron | 25.0% |
!!! | TAATGTTCTTAGCTTTAGAT+TGG | - | chr6.1:76732175-76732194 | MS.gene064328:intron | 25.0% |
!!! | TCAAGTTGAAAATGAATCTT+TGG | - | chr6.1:76731711-76731730 | MS.gene064328:intron | 25.0% |
!!! | TTTTTTAATTTTTGGGTTGC+AGG | - | chr6.1:76730648-76730667 | MS.gene064328:intron | 25.0% |
!!! | TTTTTTGTTTTCTCTTTCAG+TGG | - | chr6.1:76732213-76732232 | MS.gene064328:intron | 25.0% |
AAGAACAATTGGTACATTAG+GGG | + | chr6.1:76732261-76732280 | None:intergenic | 30.0% | |
AAGAACTGAGGAAACAAATT+GGG | - | chr6.1:76732661-76732680 | MS.gene064328:intron | 30.0% | |
AATAAGCTGTTTATCCAAAC+AGG | - | chr6.1:76730412-76730431 | MS.gene064328:intron | 30.0% | |
AATGTACCAATTGTTCTTGT+TGG | - | chr6.1:76732263-76732282 | MS.gene064328:intron | 30.0% | |
ACAAGAACAATTGGTACATT+AGG | + | chr6.1:76732263-76732282 | None:intergenic | 30.0% | |
AGTCAAATGTAACAAGTGTA+TGG | + | chr6.1:76733664-76733683 | None:intergenic | 30.0% | |
ATAAGCTGTTTATCCAAACA+GGG | - | chr6.1:76730413-76730432 | MS.gene064328:intron | 30.0% | |
CAAGAACAATTGGTACATTA+GGG | + | chr6.1:76732262-76732281 | None:intergenic | 30.0% | |
GTTGAAAATGAATCTTTGGT+TGG | - | chr6.1:76731715-76731734 | MS.gene064328:intron | 30.0% | |
TAATGTTATAACATCTGCTG+AGG | - | chr6.1:76732446-76732465 | MS.gene064328:intron | 30.0% | |
TATTGAAATCCAAAGTTGTC+AGG | - | chr6.1:76732742-76732761 | MS.gene064328:CDS | 30.0% | |
TCTGTCTAGTGATTTAATAG+TGG | - | chr6.1:76733522-76733541 | MS.gene064328:intron | 30.0% | |
TGGTGAGAATGATCTATTAT+TGG | + | chr6.1:76732081-76732100 | None:intergenic | 30.0% | |
TTCTTCTCTTAGTAGGTTAA+AGG | + | chr6.1:76732345-76732364 | None:intergenic | 30.0% | |
TTGTGTAAGGATTCTAATTC+TGG | - | chr6.1:76730560-76730579 | MS.gene064328:intron | 30.0% | |
TTTGTACCAACAAGAACAAT+TGG | + | chr6.1:76732272-76732291 | None:intergenic | 30.0% | |
! | AACAGTTCTAATATTCGGTT+TGG | + | chr6.1:76733422-76733441 | None:intergenic | 30.0% |
! | AGGTCTTTTATGATGTATGT+TGG | - | chr6.1:76732762-76732781 | MS.gene064328:CDS | 30.0% |
! | ATTATTTGATGTGTTGGCAA+TGG | - | chr6.1:76732576-76732595 | MS.gene064328:intron | 30.0% |
! | ATTGATAGCTACTTGATGAT+AGG | - | chr6.1:76731777-76731796 | MS.gene064328:intron | 30.0% |
! | TTCATTAAATGTGTCACTGT+TGG | - | chr6.1:76729984-76730003 | MS.gene064328:intron | 30.0% |
! | TTGATAGCTACTTGATGATA+GGG | - | chr6.1:76731778-76731797 | MS.gene064328:intron | 30.0% |
!! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr6.1:76730231-76730250 | MS.gene064328:intron | 30.0% |
!! | TGTTTTTGATACTGCCATTA+AGG | - | chr6.1:76732856-76732875 | MS.gene064328:intron | 30.0% |
!! | TTCTAATATTCGGTTTGGTT+CGG | + | chr6.1:76733417-76733436 | None:intergenic | 30.0% |
!! | TTTGCATGTTGGTGATAAAT+CGG | - | chr6.1:76731388-76731407 | MS.gene064328:intron | 30.0% |
!!! | CTATCTTCTTTTTTACCACA+GGG | - | chr6.1:76733696-76733715 | MS.gene064328:CDS | 30.0% |
!!! | TATCTTCTTTTTTACCACAG+GGG | - | chr6.1:76733697-76733716 | MS.gene064328:CDS | 30.0% |
!!! | TCTATCTTCTTTTTTACCAC+AGG | - | chr6.1:76733695-76733714 | MS.gene064328:CDS | 30.0% |
AACATGCAAACATAGGTTCA+TGG | + | chr6.1:76731378-76731397 | None:intergenic | 35.0% | |
AAGAAATGCCAAGGAAGAAA+AGG | - | chr6.1:76732903-76732922 | MS.gene064328:intron | 35.0% | |
AAGAAGATTATAGCAGGTTG+AGG | - | chr6.1:76730893-76730912 | MS.gene064328:intron | 35.0% | |
ACAAACCATTAACACGAGTA+TGG | + | chr6.1:76733225-76733244 | None:intergenic | 35.0% | |
AGAACTGAGGAAACAAATTG+GGG | - | chr6.1:76732662-76732681 | MS.gene064328:intron | 35.0% | |
AGGTTGAAGAACAACCTTAA+TGG | + | chr6.1:76732873-76732892 | None:intergenic | 35.0% | |
ATCGAGCGTTTATATCAGTT+TGG | + | chr6.1:76733254-76733273 | None:intergenic | 35.0% | |
ATGAACCTATGTTTGCATGT+TGG | - | chr6.1:76731377-76731396 | MS.gene064328:intron | 35.0% | |
CAAATAATAGGAGCAAGAGA+CGG | + | chr6.1:76732962-76732981 | None:intergenic | 35.0% | |
CAAATGCAAGTTCCTATAGT+TGG | - | chr6.1:76733617-76733636 | MS.gene064328:intron | 35.0% | |
CATAAAAGACCTGACAACTT+TGG | + | chr6.1:76732754-76732773 | None:intergenic | 35.0% | |
CATAACATAGAGATCTACCT+CGG | - | chr6.1:76732099-76732118 | MS.gene064328:intron | 35.0% | |
CGAAAAGAACTGAAATGTGA+CGG | - | chr6.1:76733477-76733496 | MS.gene064328:intron | 35.0% | |
CTTATTTCCATAAGCTTGTC+AGG | - | chr6.1:76731212-76731231 | MS.gene064328:intron | 35.0% | |
GAAGAACTGAGGAAACAAAT+TGG | - | chr6.1:76732660-76732679 | MS.gene064328:intron | 35.0% | |
GAGGAAGCAAAGAAATAGTT+AGG | + | chr6.1:76731010-76731029 | None:intergenic | 35.0% | |
GATATTGCTAGTACTGTTGA+TGG | - | chr6.1:76733149-76733168 | MS.gene064328:intron | 35.0% | |
GTCTAGTGATTTAATAGTGG+AGG | - | chr6.1:76733525-76733544 | MS.gene064328:intron | 35.0% | |
GTTCTTGTTGGTACAAAGTT+GGG | - | chr6.1:76732275-76732294 | MS.gene064328:intron | 35.0% | |
TAGTCTCTTCTTCTCTTAGT+AGG | + | chr6.1:76732352-76732371 | None:intergenic | 35.0% | |
TATCACCAACATGCAAACAT+AGG | + | chr6.1:76731385-76731404 | None:intergenic | 35.0% | |
TCAACCTGCTATAATCTTCT+TGG | + | chr6.1:76730894-76730913 | None:intergenic | 35.0% | |
TGTTCTTGTTGGTACAAAGT+TGG | - | chr6.1:76732274-76732293 | MS.gene064328:intron | 35.0% | |
TTATAACATCTGCTGAGGTA+TGG | - | chr6.1:76732451-76732470 | MS.gene064328:intron | 35.0% | |
TTGTTCATATAGACCCTGTT+TGG | + | chr6.1:76730429-76730448 | None:intergenic | 35.0% | |
! | ACTGAACCATCAACACATTT+TGG | - | chr6.1:76733190-76733209 | MS.gene064328:intron | 35.0% |
! | CATTGTGAATTTGGGACTAT+GGG | - | chr6.1:76730726-76730745 | MS.gene064328:intron | 35.0% |
! | CGTCACATTTCAGTTCTTTT+CGG | + | chr6.1:76733479-76733498 | None:intergenic | 35.0% |
! | CGTTTTATGAAACTCACTGT+TGG | - | chr6.1:76732500-76732519 | MS.gene064328:intron | 35.0% |
! | GTTTTGCCAAAATGTGTTGA+TGG | + | chr6.1:76733199-76733218 | None:intergenic | 35.0% |
! | TTCAAATTGGTTTAGCGGTT+TGG | + | chr6.1:76733451-76733470 | None:intergenic | 35.0% |
! | TTTTAGTGCAAATGTAGCTG+TGG | - | chr6.1:76730696-76730715 | MS.gene064328:intron | 35.0% |
!! | GATGGAAGCATTGTGAATTT+GGG | - | chr6.1:76730718-76730737 | MS.gene064328:intron | 35.0% |
!! | TACAGTGGGAAATTTGTTAC+TGG | + | chr6.1:76730051-76730070 | None:intergenic | 35.0% |
!! | TACTGTTGATGGTTCAATTC+AGG | - | chr6.1:76733160-76733179 | MS.gene064328:intron | 35.0% |
!! | TGATTGGTCTTTGCATTTGA+TGG | - | chr6.1:76733002-76733021 | MS.gene064328:CDS | 35.0% |
!! | TTGATTCGGAAACACAGAAT+CGG | + | chr6.1:76733280-76733299 | None:intergenic | 35.0% |
AAGAAAAGGCAAAGAAGGTC+CGG | - | chr6.1:76732917-76732936 | MS.gene064328:intron | 40.0% | |
AAGCTTTCCTGACAAGCTTA+TGG | + | chr6.1:76731222-76731241 | None:intergenic | 40.0% | |
ACTGACCATACTCGTGTTAA+TGG | - | chr6.1:76733217-76733236 | MS.gene064328:intron | 40.0% | |
AGAATCTCAGCACCAACTAT+AGG | + | chr6.1:76733632-76733651 | None:intergenic | 40.0% | |
AGAGAGAAGTCAACAAGCTA+TGG | + | chr6.1:76731750-76731769 | None:intergenic | 40.0% | |
CAAGGAAGAAAAGGCAAAGA+AGG | - | chr6.1:76732912-76732931 | MS.gene064328:intron | 40.0% | |
CGAGGTAGATCTCTATGTTA+TGG | + | chr6.1:76732101-76732120 | None:intergenic | 40.0% | |
GAAACTCACTGTTGGACTAA+AGG | - | chr6.1:76732508-76732527 | MS.gene064328:intron | 40.0% | |
TCACTTGTGAGACTGTTTGA+GGG | - | chr6.1:76731145-76731164 | MS.gene064328:intron | 40.0% | |
TGCAAACATAGGTTCATGGT+TGG | + | chr6.1:76731374-76731393 | None:intergenic | 40.0% | |
TGGATATTTCGCTGATCACA+CGG | - | chr6.1:76732419-76732438 | MS.gene064328:intron | 40.0% | |
TTAGATCTTCGTGAAGATCG+TGG | - | chr6.1:76732399-76732418 | MS.gene064328:intron | 40.0% | |
TTCACTTGTGAGACTGTTTG+AGG | - | chr6.1:76731144-76731163 | MS.gene064328:intron | 40.0% | |
TTCTGGTGTATCAGAACACA+TGG | - | chr6.1:76732134-76732153 | MS.gene064328:intron | 40.0% | |
! | AAATGTGTCACTGTTGGTGA+TGG | - | chr6.1:76729990-76730009 | MS.gene064328:intron | 40.0% |
! | CATTTCAGTTCTTTTCGGTG+CGG | + | chr6.1:76733474-76733493 | None:intergenic | 40.0% |
! | CTTCTTTGCCTTTTCTTCCT+TGG | + | chr6.1:76732914-76732933 | None:intergenic | 40.0% |
! | GCATTGTGAATTTGGGACTA+TGG | - | chr6.1:76730725-76730744 | MS.gene064328:intron | 40.0% |
! | GTTTTGTGAGACTGTTTGGA+AGG | - | chr6.1:76730235-76730254 | MS.gene064328:intron | 40.0% |
! | TGCGGTTCAAATTGGTTTAG+CGG | + | chr6.1:76733456-76733475 | None:intergenic | 40.0% |
! | TTGGTGATAAATCGGAGGAA+AGG | - | chr6.1:76731396-76731415 | MS.gene064328:intron | 40.0% |
!! | GCTTGTTGACTTCTCTCTTA+TGG | - | chr6.1:76731752-76731771 | MS.gene064328:intron | 40.0% |
!! | GGATGGAAGCATTGTGAATT+TGG | - | chr6.1:76730717-76730736 | MS.gene064328:intron | 40.0% |
!! | GTTGATGGTTCAATTCAGGA+AGG | - | chr6.1:76733164-76733183 | MS.gene064328:intron | 40.0% |
AGGTTGTTCTTCAACCTCCA+AGG | - | chr6.1:76732876-76732895 | MS.gene064328:intron | 45.0% | |
AGTGCAAATGTAGCTGTGGA+TGG | - | chr6.1:76730700-76730719 | MS.gene064328:intron | 45.0% | |
CAAGGAGGAAAGAAATGCCA+AGG | - | chr6.1:76732894-76732913 | MS.gene064328:intron | 45.0% | |
CACTTACACAAACGAGCAAC+CGG | + | chr6.1:76732939-76732958 | None:intergenic | 45.0% | |
CAGGCCAAGAAGATTATAGC+AGG | - | chr6.1:76730887-76730906 | MS.gene064328:intron | 45.0% | |
CTTGGCATTTCTTTCCTCCT+TGG | + | chr6.1:76732896-76732915 | None:intergenic | 45.0% | |
CTTTGTAGGGAGAAGAACTG+AGG | - | chr6.1:76732649-76732668 | MS.gene064328:intron | 45.0% | |
GAGAAGTCAACAAGCTATGG+TGG | + | chr6.1:76731747-76731766 | None:intergenic | 45.0% | |
GGATATTTCGCTGATCACAC+GGG | - | chr6.1:76732420-76732439 | MS.gene064328:intron | 45.0% | |
TTGTTCTTCAACCTCCAAGG+AGG | - | chr6.1:76732879-76732898 | MS.gene064328:intron | 45.0% | |
! | TTGATGTGTTGGCAATGGCA+AGG | - | chr6.1:76732581-76732600 | MS.gene064328:intron | 45.0% |
!! | CTTTTCGGTGCGGTTCAAAT+TGG | + | chr6.1:76733464-76733483 | None:intergenic | 45.0% |
!! | GCATGTTGGTGATAAATCGG+AGG | - | chr6.1:76731391-76731410 | MS.gene064328:intron | 45.0% |
!! | ATAAATTAAATAAAAAGAAA+AGG | + | chr6.1:76731041-76731060 | None:intergenic | 5.0% |
!! | TGATAATTATTTATTTATTA+TGG | + | chr6.1:76731643-76731662 | None:intergenic | 5.0% |
!!! | GTAATTTTTATAATAATTTT+GGG | - | chr6.1:76731999-76732018 | MS.gene064328:intron | 5.0% |
!!! | TGTAATTTTTATAATAATTT+TGG | - | chr6.1:76731998-76732017 | MS.gene064328:intron | 5.0% |
GGCATTTCTTTCCTCCTTGG+AGG | + | chr6.1:76732893-76732912 | None:intergenic | 50.0% | |
TCTGCTCCTCTATAGCTCAG+TGG | + | chr6.1:76730919-76730938 | None:intergenic | 50.0% | |
TTGAGGCCACTGAGCTATAG+AGG | - | chr6.1:76730910-76730929 | MS.gene064328:intron | 50.0% | |
!! | ACTGTTGGTGATGGTGCTGT+TGG | - | chr6.1:76729999-76730018 | MS.gene064328:intron | 50.0% |
!! | TACCACAGGGGTATTGTGTG+TGG | - | chr6.1:76733709-76733728 | MS.gene064328:CDS | 50.0% |
AGATCTACCTCGGCATTGCG+AGG | - | chr6.1:76732109-76732128 | MS.gene064328:intron | 55.0% | |
CTCCACACACAATACCCCTG+TGG | + | chr6.1:76733714-76733733 | None:intergenic | 55.0% | |
GCTGCACTCAATGTACGCTG+CGG | + | chr6.1:76732688-76732707 | None:intergenic | 55.0% | |
GGGGCGAATCTACGCAATTC+TGG | + | chr6.1:76732242-76732261 | None:intergenic | 55.0% | |
GTGCAGCTCGAAGACTCAAC+AGG | - | chr6.1:76732701-76732720 | MS.gene064328:intron | 55.0% | |
TTGGGACTATGGGACACTGC+AGG | - | chr6.1:76730736-76730755 | MS.gene064328:intron | 55.0% | |
!! | CACAGGGGTATTGTGTGTGG+AGG | - | chr6.1:76733712-76733731 | MS.gene064328:CDS | 55.0% |
CAGAAAGCCTCGCAATGCCG+AGG | + | chr6.1:76732119-76732138 | None:intergenic | 60.0% | |
CTCGGCATTGCGAGGCTTTC+TGG | - | chr6.1:76732117-76732136 | MS.gene064328:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 76729969 | 76733747 | 76729969 | ID=MS.gene064328 |
chr6.1 | mRNA | 76729969 | 76733747 | 76729969 | ID=MS.gene064328.t1;Parent=MS.gene064328 |
chr6.1 | exon | 76733649 | 76733747 | 76733649 | ID=MS.gene064328.t1.exon1;Parent=MS.gene064328.t1 |
chr6.1 | CDS | 76733649 | 76733747 | 76733649 | ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1 |
chr6.1 | exon | 76732959 | 76733046 | 76732959 | ID=MS.gene064328.t1.exon2;Parent=MS.gene064328.t1 |
chr6.1 | CDS | 76732959 | 76733046 | 76732959 | ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1 |
chr6.1 | exon | 76732717 | 76732826 | 76732717 | ID=MS.gene064328.t1.exon3;Parent=MS.gene064328.t1 |
chr6.1 | CDS | 76732717 | 76732826 | 76732717 | ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1 |
chr6.1 | exon | 76731420 | 76731483 | 76731420 | ID=MS.gene064328.t1.exon4;Parent=MS.gene064328.t1 |
chr6.1 | CDS | 76731420 | 76731483 | 76731420 | ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1 |
chr6.1 | exon | 76731249 | 76731313 | 76731249 | ID=MS.gene064328.t1.exon5;Parent=MS.gene064328.t1 |
chr6.1 | CDS | 76731249 | 76731313 | 76731249 | ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1 |
chr6.1 | exon | 76730994 | 76731059 | 76730994 | ID=MS.gene064328.t1.exon6;Parent=MS.gene064328.t1 |
chr6.1 | CDS | 76730994 | 76731059 | 76730994 | ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1 |
chr6.1 | exon | 76730765 | 76730871 | 76730765 | ID=MS.gene064328.t1.exon7;Parent=MS.gene064328.t1 |
chr6.1 | CDS | 76730765 | 76730871 | 76730765 | ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1 |
chr6.1 | exon | 76729969 | 76729999 | 76729969 | ID=MS.gene064328.t1.exon8;Parent=MS.gene064328.t1 |
chr6.1 | CDS | 76729969 | 76729999 | 76729969 | ID=cds.MS.gene064328.t1;Parent=MS.gene064328.t1 |
Gene Sequence |
Protein sequence |