Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71395.t1 | XP_003611788.1 | 94.3 | 297 | 17 | 0 | 10 | 306 | 30 | 326 | 1.70E-156 | 562 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71395.t1 | Q9FX85 | 65.6 | 276 | 92 | 2 | 30 | 302 | 71 | 346 | 6.9e-98 | 358.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71395.t1 | G7K821 | 94.3 | 297 | 17 | 0 | 10 | 306 | 30 | 326 | 1.2e-156 | 562.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene71395 | -0.812354 | 4.42E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene71395 | -0.828117 | 1.07E-54 | -1.69E-46 |
| MS.gene049662 | MS.gene71395 | -0.822258 | 2.61E-53 | -1.69E-46 |
| MS.gene050397 | MS.gene71395 | -0.826112 | 3.24E-54 | -1.69E-46 |
| MS.gene050464 | MS.gene71395 | -0.807543 | 4.80E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene71395 | -0.813673 | 2.27E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene71395 | -0.806848 | 6.74E-50 | -1.69E-46 |
| MS.gene050971 | MS.gene71395 | -0.812312 | 4.52E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene71395 | -0.816988 | 4.16E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene71395 | -0.807767 | 4.30E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene71395 | -0.81264 | 3.83E-51 | -1.69E-46 |
| MS.gene05233 | MS.gene71395 | 0.800522 | 1.39E-48 | -1.69E-46 |
| MS.gene053406 | MS.gene71395 | 0.821857 | 3.23E-53 | -1.69E-46 |
| MS.gene053758 | MS.gene71395 | -0.804477 | 2.12E-49 | -1.69E-46 |
| MS.gene054290 | MS.gene71395 | 0.841378 | 4.93E-58 | -1.69E-46 |
| MS.gene055116 | MS.gene71395 | -0.810405 | 1.17E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene71395 | -0.8087 | 2.72E-50 | -1.69E-46 |
| MS.gene055601 | MS.gene71395 | 0.832261 | 1.05E-55 | -1.69E-46 |
| MS.gene056511 | MS.gene71395 | -0.821866 | 3.21E-53 | -1.69E-46 |
| MS.gene056899 | MS.gene71395 | 0.826977 | 2.02E-54 | -1.69E-46 |
| MS.gene057146 | MS.gene71395 | -0.824615 | 7.33E-54 | -1.69E-46 |
| MS.gene058218 | MS.gene71395 | 0.810419 | 1.16E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene71395 | -0.829412 | 5.22E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene71395 | -0.817628 | 2.99E-52 | -1.69E-46 |
| MS.gene059043 | MS.gene71395 | 0.82229 | 2.56E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene71395 | -0.807749 | 4.34E-50 | -1.69E-46 |
| MS.gene059294 | MS.gene71395 | -0.822448 | 2.36E-53 | -1.69E-46 |
| MS.gene059402 | MS.gene71395 | 0.821747 | 3.43E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene71395 | -0.815082 | 1.11E-51 | -1.69E-46 |
| MS.gene060818 | MS.gene71395 | -0.818122 | 2.31E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene71395 | -0.810089 | 1.37E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37256 | MS.gene71395 | PPI |
| MS.gene71395 | MS.gene04636 | PPI |
| MS.gene71395 | MS.gene051232 | PPI |
| MS.gene24862 | MS.gene71395 | PPI |
| MS.gene012254 | MS.gene71395 | PPI |
| MS.gene71395 | MS.gene85778 | PPI |
| MS.gene055984 | MS.gene71395 | PPI |
| MS.gene025145 | MS.gene71395 | PPI |
| MS.gene71395 | MS.gene012253 | PPI |
| MS.gene051844 | MS.gene71395 | PPI |
| MS.gene40613 | MS.gene71395 | PPI |
| MS.gene018002 | MS.gene71395 | PPI |
| MS.gene71395 | MS.gene034512 | PPI |
| MS.gene71395 | MS.gene026111 | PPI |
| MS.gene52672 | MS.gene71395 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71395.t1 | MTR_5g017850 | 94.276 | 297 | 17 | 0 | 10 | 306 | 30 | 326 | 0.0 | 571 |
| MS.gene71395.t1 | MTR_5g017860 | 92.553 | 282 | 21 | 0 | 25 | 306 | 45 | 326 | 0.0 | 546 |
| MS.gene71395.t1 | MTR_7g093370 | 54.577 | 284 | 124 | 4 | 27 | 306 | 89 | 371 | 1.23e-101 | 303 |
| MS.gene71395.t1 | MTR_3g094650 | 51.163 | 301 | 138 | 3 | 8 | 306 | 29 | 322 | 3.17e-99 | 295 |
| MS.gene71395.t1 | MTR_4g125940 | 51.171 | 299 | 138 | 4 | 13 | 306 | 34 | 329 | 3.41e-99 | 295 |
| MS.gene71395.t1 | MTR_2g084080 | 52.650 | 283 | 125 | 3 | 25 | 306 | 43 | 317 | 6.64e-99 | 293 |
| MS.gene71395.t1 | MTR_1g054205 | 51.351 | 296 | 139 | 4 | 15 | 306 | 32 | 326 | 1.14e-98 | 293 |
| MS.gene71395.t1 | MTR_2g084110 | 51.186 | 295 | 128 | 4 | 13 | 306 | 38 | 317 | 4.18e-98 | 291 |
| MS.gene71395.t1 | MTR_4g125940 | 53.986 | 276 | 119 | 4 | 36 | 306 | 2 | 274 | 1.02e-97 | 289 |
| MS.gene71395.t1 | MTR_2g029560 | 51.590 | 283 | 133 | 3 | 27 | 306 | 44 | 325 | 1.16e-97 | 291 |
| MS.gene71395.t1 | MTR_2g029815 | 52.708 | 277 | 125 | 4 | 34 | 306 | 56 | 330 | 1.22e-97 | 291 |
| MS.gene71395.t1 | MTR_2g084020 | 52.027 | 296 | 125 | 5 | 13 | 306 | 38 | 318 | 2.52e-97 | 290 |
| MS.gene71395.t1 | MTR_2g040000 | 51.748 | 286 | 129 | 4 | 27 | 306 | 49 | 331 | 4.67e-97 | 290 |
| MS.gene71395.t1 | MTR_5g083860 | 51.418 | 282 | 128 | 3 | 27 | 306 | 51 | 325 | 1.22e-96 | 288 |
| MS.gene71395.t1 | MTR_2g029730 | 51.943 | 283 | 132 | 3 | 27 | 306 | 45 | 326 | 2.29e-96 | 288 |
| MS.gene71395.t1 | MTR_2g084010 | 52.027 | 296 | 125 | 5 | 13 | 306 | 38 | 318 | 3.05e-96 | 287 |
| MS.gene71395.t1 | MTR_2g029830 | 50.172 | 291 | 138 | 5 | 21 | 306 | 41 | 329 | 8.45e-96 | 287 |
| MS.gene71395.t1 | MTR_5g021060 | 52.837 | 282 | 130 | 3 | 27 | 306 | 50 | 330 | 2.70e-95 | 285 |
| MS.gene71395.t1 | MTR_2g029820 | 48.658 | 298 | 147 | 4 | 13 | 306 | 35 | 330 | 2.95e-95 | 286 |
| MS.gene71395.t1 | MTR_2g029800 | 51.449 | 276 | 130 | 3 | 34 | 306 | 56 | 330 | 6.19e-95 | 285 |
| MS.gene71395.t1 | MTR_5g074970 | 51.056 | 284 | 128 | 3 | 27 | 306 | 50 | 326 | 6.48e-95 | 284 |
| MS.gene71395.t1 | MTR_7g072480 | 49.832 | 297 | 133 | 4 | 11 | 306 | 35 | 316 | 2.95e-94 | 282 |
| MS.gene71395.t1 | MTR_4g083710 | 49.832 | 297 | 139 | 5 | 14 | 306 | 34 | 324 | 3.21e-94 | 282 |
| MS.gene71395.t1 | MTR_4g122640 | 52.330 | 279 | 128 | 4 | 30 | 306 | 61 | 336 | 3.91e-94 | 282 |
| MS.gene71395.t1 | MTR_2g084090 | 49.823 | 283 | 134 | 2 | 25 | 306 | 43 | 318 | 4.61e-94 | 281 |
| MS.gene71395.t1 | MTR_7g072510 | 50.340 | 294 | 130 | 4 | 14 | 306 | 34 | 312 | 4.96e-93 | 278 |
| MS.gene71395.t1 | MTR_3g094670 | 51.557 | 289 | 131 | 3 | 20 | 306 | 41 | 322 | 5.56e-93 | 279 |
| MS.gene71395.t1 | MTR_3g072190 | 50.890 | 281 | 129 | 3 | 27 | 306 | 46 | 318 | 1.42e-92 | 278 |
| MS.gene71395.t1 | MTR_4g029180 | 47.667 | 300 | 146 | 4 | 10 | 306 | 30 | 321 | 2.17e-92 | 277 |
| MS.gene71395.t1 | MTR_3g466200 | 49.470 | 283 | 133 | 3 | 27 | 306 | 45 | 320 | 5.89e-92 | 276 |
| MS.gene71395.t1 | MTR_2g028980 | 50.362 | 276 | 133 | 3 | 34 | 306 | 56 | 330 | 6.13e-92 | 277 |
| MS.gene71395.t1 | MTR_8g076820 | 51.064 | 282 | 135 | 3 | 27 | 306 | 50 | 330 | 1.50e-91 | 275 |
| MS.gene71395.t1 | MTR_2g029860 | 48.148 | 297 | 145 | 4 | 18 | 306 | 35 | 330 | 2.84e-91 | 275 |
| MS.gene71395.t1 | MTR_2g029910 | 46.667 | 300 | 157 | 2 | 10 | 306 | 33 | 332 | 4.20e-91 | 275 |
| MS.gene71395.t1 | MTR_2g029750 | 51.264 | 277 | 129 | 4 | 34 | 306 | 56 | 330 | 1.20e-90 | 274 |
| MS.gene71395.t1 | MTR_2g029850 | 51.087 | 276 | 131 | 3 | 34 | 306 | 56 | 330 | 2.50e-90 | 273 |
| MS.gene71395.t1 | MTR_2g084000 | 48.311 | 296 | 136 | 5 | 13 | 306 | 39 | 319 | 5.32e-90 | 271 |
| MS.gene71395.t1 | MTR_4g029170 | 47.000 | 300 | 148 | 4 | 10 | 306 | 30 | 321 | 5.43e-90 | 271 |
| MS.gene71395.t1 | MTR_4g074995 | 48.136 | 295 | 132 | 5 | 15 | 306 | 32 | 308 | 2.74e-89 | 269 |
| MS.gene71395.t1 | MTR_1g022970 | 51.786 | 280 | 131 | 3 | 30 | 306 | 69 | 347 | 5.50e-89 | 270 |
| MS.gene71395.t1 | MTR_4g029200 | 49.466 | 281 | 133 | 3 | 27 | 306 | 66 | 338 | 1.80e-88 | 268 |
| MS.gene71395.t1 | MTR_2g029740 | 48.421 | 285 | 140 | 5 | 27 | 306 | 48 | 330 | 1.83e-87 | 266 |
| MS.gene71395.t1 | MTR_3g094630 | 48.173 | 301 | 147 | 3 | 8 | 306 | 29 | 322 | 3.72e-87 | 264 |
| MS.gene71395.t1 | MTR_2g088770 | 47.482 | 278 | 142 | 4 | 31 | 306 | 50 | 325 | 4.09e-87 | 264 |
| MS.gene71395.t1 | MTR_4g029190 | 50.534 | 281 | 132 | 4 | 27 | 306 | 66 | 340 | 1.32e-86 | 263 |
| MS.gene71395.t1 | MTR_1g115900 | 45.033 | 302 | 155 | 4 | 8 | 306 | 28 | 321 | 3.03e-85 | 259 |
| MS.gene71395.t1 | MTR_4g046713 | 46.209 | 277 | 147 | 2 | 31 | 306 | 51 | 326 | 4.22e-85 | 259 |
| MS.gene71395.t1 | MTR_7g026990 | 49.110 | 281 | 133 | 4 | 27 | 306 | 51 | 322 | 5.09e-84 | 256 |
| MS.gene71395.t1 | MTR_5g074740 | 51.748 | 286 | 123 | 9 | 27 | 306 | 45 | 321 | 5.56e-84 | 256 |
| MS.gene71395.t1 | MTR_5g074860 | 50.877 | 285 | 125 | 8 | 27 | 305 | 49 | 324 | 6.59e-84 | 256 |
| MS.gene71395.t1 | MTR_2g029830 | 49.612 | 258 | 124 | 4 | 53 | 306 | 6 | 261 | 3.01e-83 | 253 |
| MS.gene71395.t1 | MTR_5g074760 | 51.399 | 286 | 124 | 9 | 27 | 306 | 45 | 321 | 3.16e-83 | 254 |
| MS.gene71395.t1 | MTR_5g049280 | 46.643 | 283 | 144 | 5 | 30 | 306 | 56 | 337 | 4.64e-83 | 254 |
| MS.gene71395.t1 | MTR_3g466180 | 50.178 | 281 | 131 | 3 | 27 | 306 | 51 | 323 | 5.37e-83 | 253 |
| MS.gene71395.t1 | MTR_4g074990 | 46.284 | 296 | 135 | 5 | 14 | 306 | 31 | 305 | 1.72e-82 | 251 |
| MS.gene71395.t1 | MTR_5g074710 | 48.852 | 305 | 130 | 10 | 8 | 306 | 37 | 321 | 2.11e-82 | 252 |
| MS.gene71395.t1 | MTR_5g014100 | 45.574 | 305 | 147 | 6 | 11 | 306 | 37 | 331 | 1.15e-81 | 250 |
| MS.gene71395.t1 | MTR_2g008710 | 45.791 | 297 | 152 | 4 | 14 | 306 | 34 | 325 | 3.76e-81 | 249 |
| MS.gene71395.t1 | MTR_4g133800 | 42.667 | 300 | 163 | 4 | 8 | 306 | 42 | 333 | 4.59e-81 | 249 |
| MS.gene71395.t1 | MTR_3g092990 | 43.564 | 303 | 161 | 4 | 6 | 306 | 32 | 326 | 3.68e-79 | 244 |
| MS.gene71395.t1 | MTR_4g030890 | 46.290 | 283 | 147 | 3 | 25 | 306 | 118 | 396 | 1.13e-78 | 245 |
| MS.gene71395.t1 | MTR_1g101830 | 42.756 | 283 | 158 | 3 | 24 | 306 | 44 | 322 | 4.12e-78 | 241 |
| MS.gene71395.t1 | MTR_7g086820 | 43.289 | 298 | 162 | 4 | 9 | 306 | 22 | 312 | 7.04e-78 | 240 |
| MS.gene71395.t1 | MTR_3g072190 | 48.450 | 258 | 124 | 3 | 50 | 306 | 2 | 251 | 8.53e-78 | 238 |
| MS.gene71395.t1 | MTR_5g022870 | 45.357 | 280 | 147 | 4 | 27 | 306 | 43 | 316 | 1.42e-77 | 239 |
| MS.gene71395.t1 | MTR_0155s0040 | 43.357 | 286 | 151 | 4 | 21 | 306 | 41 | 315 | 2.27e-77 | 239 |
| MS.gene71395.t1 | MTR_4g031140 | 44.218 | 294 | 157 | 5 | 15 | 306 | 36 | 324 | 6.92e-77 | 238 |
| MS.gene71395.t1 | MTR_4g114210 | 43.643 | 291 | 154 | 4 | 21 | 306 | 35 | 320 | 1.75e-75 | 234 |
| MS.gene71395.t1 | MTR_1g025980 | 43.289 | 298 | 164 | 3 | 8 | 305 | 25 | 317 | 5.87e-74 | 230 |
| MS.gene71395.t1 | MTR_2g437770 | 44.765 | 277 | 143 | 4 | 31 | 306 | 74 | 341 | 6.37e-74 | 231 |
| MS.gene71395.t1 | MTR_1g077000 | 41.877 | 277 | 150 | 4 | 30 | 306 | 62 | 327 | 1.03e-73 | 229 |
| MS.gene71395.t1 | MTR_8g075100 | 41.196 | 301 | 171 | 4 | 6 | 306 | 25 | 319 | 1.32e-73 | 229 |
| MS.gene71395.t1 | MTR_7g107520 | 44.643 | 280 | 149 | 5 | 28 | 306 | 46 | 320 | 1.51e-73 | 229 |
| MS.gene71395.t1 | MTR_3g467600 | 43.333 | 330 | 154 | 10 | 2 | 306 | 3 | 324 | 5.26e-73 | 228 |
| MS.gene71395.t1 | MTR_6g027440 | 43.929 | 280 | 151 | 4 | 27 | 306 | 41 | 314 | 4.07e-72 | 225 |
| MS.gene71395.t1 | MTR_4g074980 | 44.218 | 294 | 132 | 6 | 14 | 306 | 32 | 294 | 4.86e-72 | 224 |
| MS.gene71395.t1 | MTR_4g074980 | 50.000 | 228 | 105 | 4 | 14 | 238 | 32 | 253 | 2.72e-71 | 221 |
| MS.gene71395.t1 | MTR_2g008160 | 41.472 | 299 | 163 | 6 | 14 | 306 | 31 | 323 | 1.02e-70 | 222 |
| MS.gene71395.t1 | MTR_6g043280 | 43.860 | 285 | 146 | 6 | 25 | 306 | 59 | 332 | 2.63e-69 | 219 |
| MS.gene71395.t1 | MTR_1g009750 | 42.491 | 273 | 151 | 4 | 38 | 306 | 58 | 328 | 4.65e-68 | 215 |
| MS.gene71395.t1 | MTR_1g038680 | 42.349 | 281 | 158 | 4 | 30 | 306 | 52 | 332 | 5.81e-68 | 215 |
| MS.gene71395.t1 | MTR_1g086320 | 42.349 | 281 | 158 | 4 | 30 | 306 | 53 | 333 | 6.95e-68 | 215 |
| MS.gene71395.t1 | MTR_3g092990 | 41.254 | 303 | 157 | 5 | 6 | 306 | 32 | 315 | 3.93e-67 | 213 |
| MS.gene71395.t1 | MTR_7g086870 | 42.125 | 273 | 148 | 4 | 34 | 306 | 49 | 311 | 1.55e-66 | 211 |
| MS.gene71395.t1 | MTR_7g029030 | 42.593 | 270 | 141 | 5 | 42 | 306 | 60 | 320 | 1.70e-66 | 211 |
| MS.gene71395.t1 | MTR_1g090760 | 40.559 | 286 | 165 | 5 | 25 | 306 | 46 | 330 | 7.23e-66 | 210 |
| MS.gene71395.t1 | MTR_6g043240 | 42.756 | 283 | 148 | 5 | 26 | 306 | 61 | 331 | 7.79e-66 | 210 |
| MS.gene71395.t1 | MTR_4g087965 | 42.105 | 266 | 149 | 4 | 42 | 302 | 77 | 342 | 1.43e-65 | 209 |
| MS.gene71395.t1 | MTR_5g074860 | 46.667 | 285 | 98 | 10 | 27 | 305 | 49 | 285 | 6.80e-65 | 206 |
| MS.gene71395.t1 | MTR_1g086490 | 40.830 | 289 | 158 | 5 | 30 | 306 | 53 | 340 | 5.20e-64 | 205 |
| MS.gene71395.t1 | MTR_2g008730 | 46.281 | 242 | 124 | 3 | 69 | 306 | 62 | 301 | 1.34e-63 | 203 |
| MS.gene71395.t1 | MTR_2g099175 | 39.355 | 310 | 171 | 6 | 2 | 306 | 38 | 335 | 2.89e-63 | 203 |
| MS.gene71395.t1 | MTR_5g016010 | 38.290 | 269 | 159 | 5 | 42 | 305 | 62 | 328 | 6.51e-61 | 197 |
| MS.gene71395.t1 | MTR_4g127670 | 41.481 | 270 | 148 | 6 | 38 | 302 | 55 | 319 | 1.02e-59 | 194 |
| MS.gene71395.t1 | MTR_2g067440 | 36.792 | 318 | 168 | 8 | 19 | 305 | 71 | 386 | 1.92e-59 | 195 |
| MS.gene71395.t1 | MTR_2g077990 | 35.866 | 329 | 174 | 8 | 10 | 302 | 75 | 402 | 4.24e-58 | 192 |
| MS.gene71395.t1 | MTR_3g105790 | 41.727 | 278 | 154 | 5 | 32 | 306 | 50 | 322 | 5.78e-58 | 189 |
| MS.gene71395.t1 | MTR_6g043460 | 41.091 | 275 | 151 | 4 | 34 | 306 | 63 | 328 | 8.25e-58 | 189 |
| MS.gene71395.t1 | MTR_8g062780 | 38.745 | 271 | 164 | 2 | 38 | 306 | 54 | 324 | 1.20e-56 | 186 |
| MS.gene71395.t1 | MTR_2g078610 | 34.954 | 329 | 177 | 8 | 10 | 302 | 75 | 402 | 2.91e-56 | 187 |
| MS.gene71395.t1 | MTR_4g095450 | 40.226 | 266 | 147 | 6 | 42 | 302 | 62 | 320 | 4.64e-56 | 184 |
| MS.gene71395.t1 | MTR_1g009750 | 38.745 | 271 | 147 | 5 | 38 | 306 | 58 | 311 | 5.11e-55 | 181 |
| MS.gene71395.t1 | MTR_2g008160 | 36.789 | 299 | 142 | 6 | 14 | 306 | 31 | 288 | 1.93e-54 | 179 |
| MS.gene71395.t1 | MTR_5g033470 | 35.932 | 295 | 172 | 6 | 23 | 306 | 89 | 377 | 3.06e-54 | 181 |
| MS.gene71395.t1 | MTR_0286s0010 | 33.851 | 322 | 191 | 7 | 1 | 306 | 19 | 334 | 1.17e-53 | 178 |
| MS.gene71395.t1 | MTR_6g008075 | 33.851 | 322 | 191 | 7 | 1 | 306 | 19 | 334 | 1.17e-53 | 178 |
| MS.gene71395.t1 | MTR_2g078280 | 34.277 | 318 | 172 | 8 | 10 | 291 | 75 | 391 | 5.02e-50 | 171 |
| MS.gene71395.t1 | MTR_4g132490 | 33.223 | 301 | 196 | 4 | 8 | 306 | 30 | 327 | 8.12e-50 | 168 |
| MS.gene71395.t1 | MTR_0147s0010 | 34.828 | 290 | 153 | 6 | 37 | 305 | 107 | 381 | 8.65e-50 | 169 |
| MS.gene71395.t1 | MTR_2g067450 | 37.132 | 272 | 158 | 8 | 41 | 305 | 44 | 309 | 1.68e-46 | 159 |
| MS.gene71395.t1 | MTR_3g105790 | 42.194 | 237 | 131 | 5 | 74 | 306 | 12 | 246 | 6.41e-46 | 155 |
| MS.gene71395.t1 | MTR_5g074700 | 42.424 | 231 | 108 | 9 | 80 | 306 | 5 | 214 | 1.32e-45 | 154 |
| MS.gene71395.t1 | MTR_7g072490 | 41.453 | 234 | 76 | 3 | 53 | 286 | 2 | 174 | 8.54e-45 | 151 |
| MS.gene71395.t1 | MTR_2g008160 | 47.682 | 151 | 76 | 2 | 21 | 171 | 38 | 185 | 1.79e-44 | 150 |
| MS.gene71395.t1 | MTR_1g066710 | 33.333 | 273 | 171 | 5 | 38 | 306 | 58 | 323 | 9.35e-42 | 147 |
| MS.gene71395.t1 | MTR_4g132110 | 33.456 | 272 | 172 | 4 | 38 | 306 | 63 | 328 | 6.35e-41 | 145 |
| MS.gene71395.t1 | MTR_1g066640 | 34.182 | 275 | 166 | 5 | 38 | 306 | 58 | 323 | 1.34e-40 | 144 |
| MS.gene71395.t1 | MTR_1g066380 | 33.088 | 272 | 173 | 4 | 38 | 306 | 58 | 323 | 8.56e-40 | 142 |
| MS.gene71395.t1 | MTR_4g132110 | 33.213 | 277 | 171 | 5 | 38 | 306 | 63 | 333 | 1.85e-39 | 141 |
| MS.gene71395.t1 | MTR_1g066680 | 33.217 | 286 | 174 | 5 | 28 | 306 | 47 | 322 | 1.94e-39 | 141 |
| MS.gene71395.t1 | MTR_3g072210 | 41.361 | 191 | 101 | 5 | 119 | 306 | 56 | 238 | 9.18e-38 | 134 |
| MS.gene71395.t1 | MTR_2g029880 | 40.415 | 193 | 101 | 4 | 117 | 306 | 7 | 188 | 1.22e-37 | 133 |
| MS.gene71395.t1 | MTR_3g072260 | 61.224 | 98 | 38 | 0 | 21 | 118 | 40 | 137 | 4.44e-36 | 127 |
| MS.gene71395.t1 | MTR_1g066380 | 31.660 | 259 | 168 | 4 | 51 | 306 | 3 | 255 | 1.22e-34 | 127 |
| MS.gene71395.t1 | MTR_2g077980 | 31.673 | 281 | 143 | 10 | 69 | 306 | 11 | 285 | 1.02e-29 | 114 |
| MS.gene71395.t1 | MTR_7g086790 | 34.392 | 189 | 102 | 5 | 54 | 242 | 17 | 183 | 8.22e-27 | 104 |
| MS.gene71395.t1 | MTR_2g078560 | 28.829 | 222 | 127 | 4 | 112 | 302 | 95 | 316 | 1.10e-23 | 99.0 |
| MS.gene71395.t1 | MTR_4g114220 | 54.444 | 90 | 31 | 2 | 27 | 116 | 23 | 102 | 5.57e-22 | 90.1 |
| MS.gene71395.t1 | MTR_5g058120 | 35.366 | 164 | 94 | 3 | 141 | 304 | 6 | 157 | 1.08e-21 | 92.4 |
| MS.gene71395.t1 | MTR_6g048160 | 59.155 | 71 | 25 | 2 | 46 | 116 | 22 | 88 | 2.40e-20 | 84.0 |
| MS.gene71395.t1 | MTR_3g462850 | 34.507 | 142 | 87 | 4 | 170 | 306 | 9 | 149 | 7.56e-19 | 82.0 |
| MS.gene71395.t1 | MTR_2g029930 | 50.685 | 73 | 22 | 2 | 34 | 92 | 32 | 104 | 6.15e-16 | 72.8 |
| MS.gene71395.t1 | MTR_1g089005 | 40.000 | 110 | 59 | 2 | 10 | 113 | 18 | 126 | 1.72e-15 | 72.8 |
| MS.gene71395.t1 | MTR_4g031040 | 32.184 | 174 | 72 | 5 | 68 | 240 | 3 | 131 | 4.03e-15 | 71.2 |
| MS.gene71395.t1 | MTR_5g074770 | 47.191 | 89 | 44 | 3 | 219 | 305 | 21 | 108 | 1.51e-14 | 68.9 |
| MS.gene71395.t1 | MTR_7g086810 | 39.785 | 93 | 30 | 1 | 33 | 125 | 32 | 98 | 2.76e-14 | 71.2 |
| MS.gene71395.t1 | MTR_1g098320 | 42.105 | 76 | 44 | 0 | 231 | 306 | 49 | 124 | 3.23e-14 | 68.9 |
| MS.gene71395.t1 | MTR_7g107500 | 41.667 | 84 | 48 | 1 | 223 | 306 | 15 | 97 | 4.34e-14 | 67.4 |
| MS.gene71395.t1 | MTR_7g086785 | 45.205 | 73 | 39 | 1 | 53 | 125 | 4 | 75 | 3.58e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71395.t1 | AT1G49570 | 61.438 | 306 | 111 | 4 | 3 | 302 | 42 | 346 | 3.10e-126 | 364 |
| MS.gene71395.t1 | AT5G19890 | 58.007 | 281 | 108 | 4 | 30 | 306 | 53 | 327 | 1.11e-107 | 317 |
| MS.gene71395.t1 | AT5G06730 | 52.564 | 312 | 140 | 5 | 1 | 306 | 25 | 334 | 8.86e-106 | 313 |
| MS.gene71395.t1 | AT5G06720 | 50.161 | 311 | 149 | 4 | 1 | 306 | 24 | 333 | 5.60e-100 | 297 |
| MS.gene71395.t1 | AT4G36430 | 50.355 | 282 | 137 | 3 | 27 | 306 | 50 | 330 | 5.95e-97 | 289 |
| MS.gene71395.t1 | AT2G18150 | 50.355 | 282 | 137 | 3 | 27 | 306 | 56 | 336 | 1.70e-96 | 288 |
| MS.gene71395.t1 | AT2G38390 | 50.350 | 286 | 137 | 4 | 25 | 306 | 49 | 333 | 4.00e-94 | 283 |
| MS.gene71395.t1 | AT1G44970 | 52.857 | 280 | 128 | 3 | 30 | 306 | 68 | 346 | 9.81e-93 | 279 |
| MS.gene71395.t1 | AT2G18140 | 49.291 | 282 | 140 | 3 | 27 | 306 | 55 | 335 | 2.29e-92 | 278 |
| MS.gene71395.t1 | AT5G05340 | 47.518 | 282 | 139 | 3 | 27 | 306 | 50 | 324 | 3.55e-91 | 274 |
| MS.gene71395.t1 | AT2G38380 | 49.648 | 284 | 138 | 4 | 27 | 306 | 51 | 333 | 4.93e-88 | 267 |
| MS.gene71395.t1 | AT3G32980 | 49.129 | 287 | 140 | 4 | 25 | 306 | 49 | 334 | 6.02e-88 | 267 |
| MS.gene71395.t1 | AT4G16270 | 50.000 | 282 | 136 | 4 | 27 | 306 | 70 | 348 | 1.16e-87 | 266 |
| MS.gene71395.t1 | AT1G14550 | 46.102 | 295 | 149 | 4 | 15 | 306 | 34 | 321 | 1.73e-87 | 265 |
| MS.gene71395.t1 | AT1G14540 | 44.951 | 307 | 160 | 4 | 2 | 306 | 16 | 315 | 5.05e-86 | 261 |
| MS.gene71395.t1 | AT1G68850 | 47.350 | 283 | 141 | 6 | 31 | 306 | 54 | 335 | 1.35e-85 | 260 |
| MS.gene71395.t1 | AT3G49110 | 48.288 | 292 | 145 | 4 | 20 | 306 | 46 | 336 | 1.39e-85 | 261 |
| MS.gene71395.t1 | AT4G08770 | 48.772 | 285 | 140 | 4 | 27 | 306 | 44 | 327 | 2.23e-85 | 260 |
| MS.gene71395.t1 | AT4G08780 | 45.455 | 308 | 162 | 4 | 4 | 306 | 21 | 327 | 2.30e-85 | 260 |
| MS.gene71395.t1 | AT3G49120 | 47.603 | 292 | 147 | 4 | 20 | 306 | 45 | 335 | 6.44e-85 | 259 |
| MS.gene71395.t1 | AT5G19880 | 47.157 | 299 | 151 | 5 | 14 | 306 | 32 | 329 | 3.17e-84 | 256 |
| MS.gene71395.t1 | AT5G58400 | 48.029 | 279 | 135 | 3 | 31 | 306 | 54 | 325 | 3.45e-84 | 256 |
| MS.gene71395.t1 | AT5G58390 | 48.913 | 276 | 131 | 3 | 34 | 306 | 48 | 316 | 5.10e-84 | 256 |
| MS.gene71395.t1 | AT5G66390 | 47.518 | 282 | 145 | 3 | 27 | 306 | 53 | 333 | 5.11e-84 | 256 |
| MS.gene71395.t1 | AT3G50990 | 47.518 | 282 | 145 | 3 | 27 | 306 | 61 | 341 | 2.53e-83 | 255 |
| MS.gene71395.t1 | AT5G15180 | 47.703 | 283 | 142 | 6 | 26 | 306 | 51 | 329 | 5.88e-83 | 253 |
| MS.gene71395.t1 | AT5G51890 | 43.617 | 282 | 156 | 2 | 25 | 306 | 44 | 322 | 5.94e-82 | 251 |
| MS.gene71395.t1 | AT4G11290 | 42.857 | 308 | 172 | 4 | 2 | 306 | 20 | 326 | 9.37e-81 | 248 |
| MS.gene71395.t1 | AT3G01190 | 47.331 | 281 | 142 | 6 | 27 | 306 | 46 | 321 | 4.76e-80 | 246 |
| MS.gene71395.t1 | AT1G05260 | 42.857 | 301 | 166 | 6 | 9 | 306 | 28 | 325 | 1.52e-79 | 244 |
| MS.gene71395.t1 | AT3G03670 | 46.953 | 279 | 139 | 4 | 32 | 306 | 48 | 321 | 2.91e-79 | 244 |
| MS.gene71395.t1 | AT2G35380 | 44.194 | 310 | 144 | 6 | 11 | 306 | 41 | 335 | 4.69e-79 | 244 |
| MS.gene71395.t1 | AT5G64120 | 45.324 | 278 | 146 | 4 | 29 | 306 | 57 | 328 | 1.76e-77 | 239 |
| MS.gene71395.t1 | AT2G22420 | 42.453 | 318 | 165 | 7 | 3 | 306 | 6 | 319 | 1.29e-76 | 237 |
| MS.gene71395.t1 | AT3G21770 | 44.128 | 281 | 153 | 4 | 24 | 302 | 46 | 324 | 2.01e-76 | 237 |
| MS.gene71395.t1 | AT5G17820 | 44.815 | 270 | 139 | 4 | 37 | 306 | 54 | 313 | 1.94e-75 | 234 |
| MS.gene71395.t1 | AT1G05240 | 44.203 | 276 | 146 | 6 | 31 | 302 | 50 | 321 | 2.95e-75 | 234 |
| MS.gene71395.t1 | AT1G05250 | 44.203 | 276 | 146 | 6 | 31 | 302 | 50 | 321 | 2.95e-75 | 234 |
| MS.gene71395.t1 | AT5G17820 | 44.815 | 270 | 139 | 4 | 37 | 306 | 107 | 366 | 4.23e-74 | 232 |
| MS.gene71395.t1 | AT4G25980 | 41.156 | 294 | 163 | 5 | 19 | 306 | 37 | 326 | 6.86e-74 | 230 |
| MS.gene71395.t1 | AT5G42180 | 42.808 | 292 | 157 | 4 | 19 | 305 | 30 | 316 | 9.43e-73 | 227 |
| MS.gene71395.t1 | AT2G41480 | 44.086 | 279 | 146 | 5 | 33 | 306 | 55 | 328 | 1.38e-71 | 224 |
| MS.gene71395.t1 | AT4G33420 | 39.672 | 305 | 173 | 4 | 2 | 306 | 32 | 325 | 1.49e-71 | 224 |
| MS.gene71395.t1 | AT4G33420 | 39.672 | 305 | 173 | 4 | 2 | 306 | 79 | 372 | 6.20e-71 | 224 |
| MS.gene71395.t1 | AT4G33870 | 35.652 | 345 | 177 | 6 | 2 | 302 | 54 | 397 | 4.22e-69 | 220 |
| MS.gene71395.t1 | AT5G39580 | 43.416 | 281 | 152 | 5 | 27 | 306 | 45 | 319 | 5.24e-69 | 218 |
| MS.gene71395.t1 | AT1G77100 | 40.506 | 316 | 168 | 8 | 2 | 306 | 13 | 319 | 8.33e-68 | 214 |
| MS.gene71395.t1 | AT5G64110 | 41.869 | 289 | 155 | 7 | 21 | 306 | 52 | 330 | 1.18e-67 | 214 |
| MS.gene71395.t1 | AT5G64100 | 39.869 | 306 | 169 | 6 | 4 | 306 | 38 | 331 | 1.32e-66 | 212 |
| MS.gene71395.t1 | AT4G26010 | 41.404 | 285 | 149 | 6 | 27 | 306 | 66 | 337 | 2.23e-66 | 211 |
| MS.gene71395.t1 | AT4G26010 | 41.404 | 285 | 149 | 6 | 27 | 306 | 38 | 309 | 2.41e-66 | 210 |
| MS.gene71395.t1 | AT1G30870 | 41.877 | 277 | 150 | 4 | 33 | 306 | 77 | 345 | 2.59e-66 | 211 |
| MS.gene71395.t1 | AT2G34060 | 41.912 | 272 | 153 | 4 | 38 | 304 | 73 | 344 | 2.85e-66 | 211 |
| MS.gene71395.t1 | AT1G71695 | 40.580 | 276 | 154 | 4 | 34 | 306 | 71 | 339 | 3.32e-66 | 211 |
| MS.gene71395.t1 | AT5G24070 | 41.935 | 279 | 151 | 5 | 33 | 306 | 63 | 335 | 3.52e-66 | 211 |
| MS.gene71395.t1 | AT2G24800 | 43.206 | 287 | 152 | 5 | 25 | 306 | 49 | 329 | 2.56e-65 | 208 |
| MS.gene71395.t1 | AT4G37530 | 42.751 | 269 | 149 | 4 | 42 | 306 | 62 | 329 | 4.35e-64 | 205 |
| MS.gene71395.t1 | AT4G31760 | 41.463 | 287 | 156 | 6 | 25 | 306 | 47 | 326 | 2.84e-63 | 203 |
| MS.gene71395.t1 | AT3G49960 | 41.852 | 270 | 150 | 5 | 42 | 306 | 62 | 329 | 4.55e-63 | 202 |
| MS.gene71395.t1 | AT5G67400 | 40.741 | 270 | 153 | 5 | 42 | 306 | 62 | 329 | 1.29e-62 | 201 |
| MS.gene71395.t1 | AT3G28200 | 38.889 | 288 | 160 | 4 | 25 | 306 | 39 | 316 | 3.76e-62 | 200 |
| MS.gene71395.t1 | AT2G43480 | 41.219 | 279 | 153 | 5 | 33 | 306 | 63 | 335 | 4.78e-62 | 200 |
| MS.gene71395.t1 | AT4G37520 | 41.264 | 269 | 153 | 4 | 42 | 306 | 62 | 329 | 2.61e-61 | 198 |
| MS.gene71395.t1 | AT5G14130 | 40.876 | 274 | 151 | 5 | 38 | 306 | 63 | 330 | 2.89e-61 | 198 |
| MS.gene71395.t1 | AT4G17690 | 40.441 | 272 | 153 | 4 | 38 | 306 | 57 | 322 | 3.38e-61 | 197 |
| MS.gene71395.t1 | AT2G18980 | 40.146 | 274 | 153 | 6 | 38 | 306 | 56 | 323 | 3.65e-61 | 197 |
| MS.gene71395.t1 | AT5G14130 | 40.876 | 274 | 151 | 5 | 38 | 306 | 104 | 371 | 1.23e-60 | 197 |
| MS.gene71395.t1 | AT2G39040 | 41.722 | 302 | 160 | 9 | 18 | 306 | 52 | 350 | 2.81e-60 | 196 |
| MS.gene71395.t1 | AT2G35380 | 42.857 | 252 | 122 | 5 | 69 | 306 | 4 | 247 | 4.34e-60 | 192 |
| MS.gene71395.t1 | AT4G30170 | 37.591 | 274 | 160 | 6 | 38 | 306 | 58 | 325 | 8.00e-59 | 191 |
| MS.gene71395.t1 | AT4G37520 | 40.520 | 269 | 152 | 5 | 42 | 306 | 62 | 326 | 1.80e-58 | 191 |
| MS.gene71395.t1 | AT5G47000 | 38.603 | 272 | 159 | 4 | 38 | 306 | 64 | 330 | 2.36e-58 | 191 |
| MS.gene71395.t1 | AT5G40150 | 38.182 | 275 | 155 | 4 | 38 | 306 | 63 | 328 | 2.22e-57 | 188 |
| MS.gene71395.t1 | AT1G34510 | 39.483 | 271 | 150 | 5 | 37 | 306 | 52 | 309 | 8.62e-57 | 186 |
| MS.gene71395.t1 | AT5G22410 | 38.276 | 290 | 162 | 9 | 25 | 304 | 41 | 323 | 1.89e-56 | 186 |
| MS.gene71395.t1 | AT1G24110 | 37.755 | 294 | 165 | 7 | 25 | 306 | 35 | 322 | 5.10e-53 | 176 |
| MS.gene71395.t1 | AT4G37530 | 44.091 | 220 | 118 | 4 | 42 | 257 | 62 | 280 | 9.71e-53 | 174 |
| MS.gene71395.t1 | AT4G21960 | 34.191 | 272 | 170 | 4 | 38 | 306 | 62 | 327 | 1.04e-44 | 155 |
| MS.gene71395.t1 | AT2G37130 | 36.727 | 275 | 160 | 7 | 38 | 306 | 30 | 296 | 2.36e-44 | 153 |
| MS.gene71395.t1 | AT2G37130 | 36.727 | 275 | 160 | 7 | 38 | 306 | 61 | 327 | 5.92e-44 | 153 |
| MS.gene71395.t1 | AT4G25980 | 45.625 | 160 | 83 | 3 | 19 | 177 | 82 | 238 | 2.79e-43 | 150 |
| MS.gene71395.t1 | AT3G17070 | 32.841 | 271 | 178 | 4 | 39 | 306 | 70 | 339 | 7.69e-40 | 142 |
| MS.gene71395.t1 | AT5G39580 | 47.742 | 155 | 77 | 2 | 27 | 181 | 45 | 195 | 2.85e-39 | 138 |
| MS.gene71395.t1 | AT3G17070 | 31.034 | 261 | 175 | 5 | 49 | 306 | 18 | 276 | 2.65e-33 | 124 |
| MS.gene71395.t1 | AT2G24800 | 45.098 | 153 | 77 | 3 | 25 | 175 | 49 | 196 | 5.42e-32 | 119 |
| MS.gene71395.t1 | AT3G42570 | 36.607 | 112 | 58 | 3 | 36 | 145 | 20 | 120 | 1.21e-12 | 65.1 |
| MS.gene71395.t1 | AT1G77490 | 24.627 | 268 | 152 | 9 | 41 | 290 | 106 | 341 | 7.13e-11 | 63.2 |
| MS.gene71395.t1 | AT1G77490 | 24.627 | 268 | 152 | 9 | 41 | 290 | 106 | 341 | 8.04e-11 | 62.8 |
Find 64 sgRNAs with CRISPR-Local
Find 109 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGAGTAAAGGGCCATTT+TGG | 0.134765 | 5.1:-10141952 | MS.gene71395:intron |
| TGCAGTTTCCGTTGAGAAAA+TGG | 0.188621 | 5.1:-10141252 | MS.gene71395:CDS |
| TACTGCCAAGTTCGTTTCTA+AGG | 0.195982 | 5.1:-10141840 | MS.gene71395:CDS |
| AGCTGATTCCGACTCCAATT+TGG | 0.302493 | 5.1:-10141441 | MS.gene71395:CDS |
| ACAATCAGACCAAGCTCTAT+TGG | 0.304491 | 5.1:-10141342 | MS.gene71395:CDS |
| GATGATACGGACACACTAAA+AGG | 0.311071 | 5.1:-10142281 | MS.gene71395:CDS |
| TGGTGTTCTTGCGGGACAAC+AGG | 0.315941 | 5.1:-10141222 | MS.gene71395:CDS |
| AGGATCCAACGGAGCCAAAT+TGG | 0.341029 | 5.1:+10141427 | None:intergenic |
| GGTCGCATTGGTGTTCTTGC+GGG | 0.352206 | 5.1:-10141230 | MS.gene71395:CDS |
| TTCTTTAATTTCAGAGTAAA+GGG | 0.356179 | 5.1:-10141961 | MS.gene71395:intron |
| GAGTCGGAATCAGCTTGATT+TGG | 0.362486 | 5.1:+10141449 | None:intergenic |
| TATACAGGTGCACACACCTT+TGG | 0.364289 | 5.1:-10141581 | MS.gene71395:intron |
| CGACTCCAATTTGGCTCCGT+TGG | 0.365758 | 5.1:-10141432 | MS.gene71395:CDS |
| CGGGACAACAGGGTCAAATA+AGG | 0.380062 | 5.1:-10141211 | MS.gene71395:CDS |
| CTTCTTTAATTTCAGAGTAA+AGG | 0.385010 | 5.1:-10141962 | MS.gene71395:intron |
| CCAAGAGGTACAGCCCAAAA+TGG | 0.386408 | 5.1:+10141938 | None:intergenic |
| CATGAAACATCAAGCACTTC+CGG | 0.393270 | 5.1:-10143092 | MS.gene71395:intron |
| CAATCAGACCAAGCTCTATT+GGG | 0.411380 | 5.1:-10141341 | MS.gene71395:CDS |
| ATACAGGTGCACACACCTTT+GGG | 0.413975 | 5.1:-10141580 | MS.gene71395:intron |
| AGCAGCAATCCTTGAGTCAT+TGG | 0.423951 | 5.1:+10142476 | None:intergenic |
| AAGCGATGGATCAGATTTAC+CGG | 0.429554 | 5.1:+10141508 | None:intergenic |
| ATATCTAGGTTCCTAGTTAA+CGG | 0.439967 | 5.1:+10141175 | None:intergenic |
| TTACATTGACAAAACAATCA+TGG | 0.440947 | 5.1:+10142433 | None:intergenic |
| TTCTAAGGGTCTTGAAAAGA+AGG | 0.446455 | 5.1:-10141825 | MS.gene71395:CDS |
| GCAGTTTCCGTTGAGAAAAT+GGG | 0.456734 | 5.1:-10141251 | MS.gene71395:CDS |
| CTATTCGACTTTGGTGGCTC+CGG | 0.463524 | 5.1:-10141527 | MS.gene71395:CDS |
| ATGTGATGGATCTGTGCTAC+TGG | 0.464722 | 5.1:-10142303 | MS.gene71395:CDS |
| TTCTAGAGGTTCAAAGGGTG+AGG | 0.465492 | 5.1:+10141868 | None:intergenic |
| AAATTGTAGGGCCGTTAACT+AGG | 0.473141 | 5.1:-10141186 | None:intergenic |
| AAGCCAAGGCTATTCGACTT+TGG | 0.481179 | 5.1:-10141536 | MS.gene71395:CDS |
| CAAAACAATCATGGAAATGA+AGG | 0.485397 | 5.1:+10142442 | None:intergenic |
| ATGATACGGACACACTAAAA+GGG | 0.487747 | 5.1:-10142280 | MS.gene71395:CDS |
| GGGTCGCATTGGTGTTCTTG+CGG | 0.499888 | 5.1:-10141231 | MS.gene71395:CDS |
| TCAAATGTGTTCGTAGTGAC+AGG | 0.502481 | 5.1:+10141407 | None:intergenic |
| AAGGATGTAGCAGTGCTCTC+AGG | 0.511701 | 5.1:-10141806 | MS.gene71395:intron |
| CCAAGGCTATTCGACTTTGG+TGG | 0.513944 | 5.1:-10141533 | MS.gene71395:CDS |
| TGTGTTACATAGGGATGTGA+TGG | 0.525846 | 5.1:-10142317 | MS.gene71395:intron |
| TACTAGATATACAGCATCCC+TGG | 0.528146 | 5.1:+10142133 | None:intergenic |
| GTACCTCTTGGTCGTAGAGA+TGG | 0.545618 | 5.1:-10141926 | MS.gene71395:CDS |
| CCACCAAAGTCGAATAGCCT+TGG | 0.547775 | 5.1:+10141533 | None:intergenic |
| ATCTGTGCTACTGGATGATA+CGG | 0.551787 | 5.1:-10142294 | MS.gene71395:CDS |
| ACTGCCAAGTTCGTTTCTAA+GGG | 0.553364 | 5.1:-10141839 | MS.gene71395:CDS |
| TATTGTCACCCAATAGAGCT+TGG | 0.556737 | 5.1:+10141333 | None:intergenic |
| ATATACTTACTCTAGCAGCC+AGG | 0.559698 | 5.1:-10142151 | MS.gene71395:CDS |
| AAGACCCTTAGAAACGAACT+TGG | 0.562544 | 5.1:+10141835 | None:intergenic |
| TATTCAGTGAATATGTTATG+TGG | 0.562821 | 5.1:+10143135 | None:intergenic |
| GTTGAGAAAATGGGTCGCAT+TGG | 0.578115 | 5.1:-10141242 | MS.gene71395:CDS |
| TCTAGAGGTTCAAAGGGTGA+GGG | 0.582918 | 5.1:+10141869 | None:intergenic |
| TGACAATACAACTTCTGCAT+TGG | 0.583252 | 5.1:-10141318 | MS.gene71395:CDS |
| AATGCTTTACATTCAAGCCA+AGG | 0.586439 | 5.1:-10141550 | MS.gene71395:CDS |
| CAGCTATAGCCAATGACTCA+AGG | 0.590497 | 5.1:-10142485 | MS.gene71395:CDS |
| TGGTTGACAATTATAGCAAG+TGG | 0.599280 | 5.1:-10141298 | MS.gene71395:CDS |
| CAACGGAGCCAAATTGGAGT+CGG | 0.611523 | 5.1:+10141433 | None:intergenic |
| TATACTTACTCTAGCAGCCA+GGG | 0.615867 | 5.1:-10142150 | MS.gene71395:CDS |
| TCAGCACATGAGACTGTGGA+TGG | 0.616095 | 5.1:+10142173 | None:intergenic |
| AAAGCATTGCGCGAACCCAA+AGG | 0.619184 | 5.1:+10141565 | None:intergenic |
| GGTGTTCTTGCGGGACAACA+GGG | 0.632444 | 5.1:-10141221 | MS.gene71395:CDS |
| TTCGTAGTGACAGGATCCAA+CGG | 0.634025 | 5.1:+10141416 | None:intergenic |
| ATTTGCGTCGCTCTCACTCG+CGG | 0.635311 | 5.1:+10141898 | None:intergenic |
| TGATACGGACACACTAAAAG+GGG | 0.644413 | 5.1:-10142279 | MS.gene71395:CDS |
| AGAAGTGAAGAATCAAGCGA+TGG | 0.646260 | 5.1:+10141494 | None:intergenic |
| TATATCAGCACATGAGACTG+TGG | 0.660979 | 5.1:+10142169 | None:intergenic |
| TCAGTGAATATGTTATGTGG+TGG | 0.685621 | 5.1:+10143138 | None:intergenic |
| GTGCCATCTCTACGACCAAG+AGG | 0.689151 | 5.1:+10141923 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTATAGATATATAC+CGG | + | chr5.1:10141260-10141279 | None:intergenic | 10.0% |
| !! | TAACTTTATATATAGAAGAA+AGG | + | chr5.1:10142685-10142704 | None:intergenic | 15.0% |
| !! | TTTCATTAGAATAAGTATTA+TGG | + | chr5.1:10141309-10141328 | None:intergenic | 15.0% |
| !!! | ATTTTTGCTATTTATATACT+CGG | - | chr5.1:10141950-10141969 | MS.gene71395:CDS | 15.0% |
| !! | CCTAATAAAAATTCAATAAG+AGG | - | chr5.1:10142088-10142107 | MS.gene71395:intron | 20.0% |
| !! | TCAAATAAGGAAAAATTGTA+GGG | - | chr5.1:10143132-10143151 | MS.gene71395:CDS | 20.0% |
| !!! | AAATCTCTAAAAAACAGAAT+AGG | + | chr5.1:10143058-10143077 | None:intergenic | 20.0% |
| !!! | AAGAAGTTCTGATTAATAAT+TGG | + | chr5.1:10142354-10142373 | None:intergenic | 20.0% |
| !!! | ATTTCATTTTTGTGTTACAT+AGG | - | chr5.1:10142003-10142022 | MS.gene71395:intron | 20.0% |
| !!! | CCTCTTATTGAATTTTTATT+AGG | + | chr5.1:10142091-10142110 | None:intergenic | 20.0% |
| !!! | TACTATATGATAATGTTTCT+GGG | - | chr5.1:10142270-10142289 | MS.gene71395:CDS | 20.0% |
| !!! | TATTTCTAACTCTAATGATA+AGG | - | chr5.1:10142658-10142677 | MS.gene71395:intron | 20.0% |
| !!! | TTAACAATTTTGTTCAGATT+TGG | + | chr5.1:10141811-10141830 | None:intergenic | 20.0% |
| !!! | TTAACATAGTTTTTATAGAG+TGG | + | chr5.1:10141549-10141568 | None:intergenic | 20.0% |
| !!! | TTACTATATGATAATGTTTC+TGG | - | chr5.1:10142269-10142288 | MS.gene71395:CDS | 20.0% |
| !!! | TTCTTTAATTTCAGAGTAAA+GGG | - | chr5.1:10142369-10142388 | MS.gene71395:intron | 20.0% |
| !!! | TTTCATTTTTGTGTTACATA+GGG | - | chr5.1:10142004-10142023 | MS.gene71395:intron | 20.0% |
| ! | AACTATGCACTATACTAATT+TGG | - | chr5.1:10141424-10141443 | MS.gene71395:CDS | 25.0% |
| ! | AAGCTGAAACAATTTATAGA+AGG | + | chr5.1:10141594-10141613 | None:intergenic | 25.0% |
| ! | AGTTTACACATGATGTTTAA+AGG | + | chr5.1:10141408-10141427 | None:intergenic | 25.0% |
| ! | GTCAAATAAGGAAAAATTGT+AGG | - | chr5.1:10143131-10143150 | MS.gene71395:CDS | 25.0% |
| ! | TATTCAGTGAATATGTTATG+TGG | + | chr5.1:10141198-10141217 | None:intergenic | 25.0% |
| ! | TTAATTATTTGGAGACTACT+TGG | - | chr5.1:10142232-10142251 | MS.gene71395:CDS | 25.0% |
| ! | TTACATTGACAAAACAATCA+TGG | + | chr5.1:10141900-10141919 | None:intergenic | 25.0% |
| !! | ACTATATGATAATGTTTCTG+GGG | - | chr5.1:10142271-10142290 | MS.gene71395:CDS | 25.0% |
| !! | CTTCTTTAATTTCAGAGTAA+AGG | - | chr5.1:10142368-10142387 | MS.gene71395:intron | 25.0% |
| !!! | AAAAATGTTTTGAGCAATTC+TGG | - | chr5.1:10142959-10142978 | MS.gene71395:intron | 25.0% |
| !!! | AAAATGTTTTGAGCAATTCT+GGG | - | chr5.1:10142960-10142979 | MS.gene71395:intron | 25.0% |
| !!! | TTATGTTATCGTCATTTTCA+AGG | - | chr5.1:10142629-10142648 | MS.gene71395:intron | 25.0% |
| CAAAACAATCATGGAAATGA+AGG | + | chr5.1:10141891-10141910 | None:intergenic | 30.0% | |
| GAACTCGCTGTTTAATTATT+TGG | - | chr5.1:10142221-10142240 | MS.gene71395:CDS | 30.0% | |
| GTAGTCAATACACATGAAAT+TGG | + | chr5.1:10142717-10142736 | None:intergenic | 30.0% | |
| GTCAACATAGTTTCAACTTA+TGG | - | chr5.1:10141681-10141700 | MS.gene71395:intron | 30.0% | |
| TAGTATCTTATAGTAGTGCA+TGG | - | chr5.1:10141341-10141360 | MS.gene71395:CDS | 30.0% | |
| TGAAACTATGTTGACAACAA+GGG | + | chr5.1:10141676-10141695 | None:intergenic | 30.0% | |
| TGTACCAAACTTAACAGATA+AGG | - | chr5.1:10141505-10141524 | MS.gene71395:CDS | 30.0% | |
| TTGAAACTATGTTGACAACA+AGG | + | chr5.1:10141677-10141696 | None:intergenic | 30.0% | |
| TTGTCCTTATCTGTTAAGTT+TGG | + | chr5.1:10141512-10141531 | None:intergenic | 30.0% | |
| !! | AATGTTTTCTAGAGGTTCAA+AGG | + | chr5.1:10142471-10142490 | None:intergenic | 30.0% |
| !! | ATGTTTTCTAGAGGTTCAAA+GGG | + | chr5.1:10142470-10142489 | None:intergenic | 30.0% |
| AATGCTTTACATTCAAGCCA+AGG | - | chr5.1:10142780-10142799 | MS.gene71395:intron | 35.0% | |
| ACAGATAAGGACAATCATAG+TGG | - | chr5.1:10141518-10141537 | MS.gene71395:CDS | 35.0% | |
| ATGATACGGACACACTAAAA+GGG | - | chr5.1:10142050-10142069 | MS.gene71395:intron | 35.0% | |
| GAAACTATGTTGACAACAAG+GGG | + | chr5.1:10141675-10141694 | None:intergenic | 35.0% | |
| GACGATAACATAACTCGAAT+AGG | + | chr5.1:10142622-10142641 | None:intergenic | 35.0% | |
| TACGCACTCTCAATATATAC+AGG | - | chr5.1:10142734-10142753 | MS.gene71395:intron | 35.0% | |
| TCAGTGAATATGTTATGTGG+TGG | + | chr5.1:10141195-10141214 | None:intergenic | 35.0% | |
| TGACAATACAACTTCTGCAT+TGG | - | chr5.1:10143012-10143031 | MS.gene71395:intron | 35.0% | |
| TGGTTGACAATTATAGCAAG+TGG | - | chr5.1:10143032-10143051 | MS.gene71395:intron | 35.0% | |
| ! | TCCAAAATTTCTGCTCTAAG+TGG | + | chr5.1:10141483-10141502 | None:intergenic | 35.0% |
| ! | TTCTAAGGGTCTTGAAAAGA+AGG | - | chr5.1:10142505-10142524 | MS.gene71395:intron | 35.0% |
| ! | TTGGCAGTAATGTTTTCTAG+AGG | + | chr5.1:10142479-10142498 | None:intergenic | 35.0% |
| AAGACCCTTAGAAACGAACT+TGG | + | chr5.1:10142498-10142517 | None:intergenic | 40.0% | |
| AAGCGATGGATCAGATTTAC+CGG | + | chr5.1:10142825-10142844 | None:intergenic | 40.0% | |
| ACAATCAGACCAAGCTCTAT+TGG | - | chr5.1:10142988-10143007 | MS.gene71395:intron | 40.0% | |
| ACTGCCAAGTTCGTTTCTAA+GGG | - | chr5.1:10142491-10142510 | MS.gene71395:CDS | 40.0% | |
| AGAAGTGAAGAATCAAGCGA+TGG | + | chr5.1:10142839-10142858 | None:intergenic | 40.0% | |
| ATAGTAGTGCATGGACAACT+AGG | - | chr5.1:10141350-10141369 | MS.gene71395:CDS | 40.0% | |
| ATATACTTACTCTAGCAGCC+AGG | - | chr5.1:10142179-10142198 | MS.gene71395:CDS | 40.0% | |
| CAATCAGACCAAGCTCTATT+GGG | - | chr5.1:10142989-10143008 | MS.gene71395:intron | 40.0% | |
| CATGAAACATCAAGCACTTC+CGG | - | chr5.1:10141238-10141257 | MS.gene71395:CDS | 40.0% | |
| GATGATACGGACACACTAAA+AGG | - | chr5.1:10142049-10142068 | MS.gene71395:intron | 40.0% | |
| GCAGTTTCCGTTGAGAAAAT+GGG | - | chr5.1:10143079-10143098 | MS.gene71395:intron | 40.0% | |
| TACTAGATATACAGCATCCC+TGG | + | chr5.1:10142200-10142219 | None:intergenic | 40.0% | |
| TACTGCCAAGTTCGTTTCTA+AGG | - | chr5.1:10142490-10142509 | MS.gene71395:CDS | 40.0% | |
| TATACTTACTCTAGCAGCCA+GGG | - | chr5.1:10142180-10142199 | MS.gene71395:CDS | 40.0% | |
| TATATCAGCACATGAGACTG+TGG | + | chr5.1:10142164-10142183 | None:intergenic | 40.0% | |
| TATTGTCACCCAATAGAGCT+TGG | + | chr5.1:10143000-10143019 | None:intergenic | 40.0% | |
| TCAAATGTGTTCGTAGTGAC+AGG | + | chr5.1:10142926-10142945 | None:intergenic | 40.0% | |
| TGATACGGACACACTAAAAG+GGG | - | chr5.1:10142051-10142070 | MS.gene71395:intron | 40.0% | |
| TGCAGTTTCCGTTGAGAAAA+TGG | - | chr5.1:10143078-10143097 | MS.gene71395:intron | 40.0% | |
| TGTGTTACATAGGGATGTGA+TGG | - | chr5.1:10142013-10142032 | MS.gene71395:intron | 40.0% | |
| ! | AATGCGACCCATTTTCTCAA+CGG | + | chr5.1:10143089-10143108 | None:intergenic | 40.0% |
| ! | ATCTGTGCTACTGGATGATA+CGG | - | chr5.1:10142036-10142055 | MS.gene71395:intron | 40.0% |
| ! | GCCACTTAGAGCAGAAATTT+TGG | - | chr5.1:10141479-10141498 | MS.gene71395:CDS | 40.0% |
| ! | TATAGTTGAGAGCACACAAG+TGG | + | chr5.1:10141763-10141782 | None:intergenic | 40.0% |
| ! | TTCAGAGTAAAGGGCCATTT+TGG | - | chr5.1:10142378-10142397 | MS.gene71395:intron | 40.0% |
| !! | TCAGAGTAAAGGGCCATTTT+GGG | - | chr5.1:10142379-10142398 | MS.gene71395:intron | 40.0% |
| AAGCCAAGGCTATTCGACTT+TGG | - | chr5.1:10142794-10142813 | MS.gene71395:intron | 45.0% | |
| AGCAGCAATCCTTGAGTCAT+TGG | + | chr5.1:10141857-10141876 | None:intergenic | 45.0% | |
| ATACAGGTGCACACACCTTT+GGG | - | chr5.1:10142750-10142769 | MS.gene71395:intron | 45.0% | |
| CAGCTATAGCCAATGACTCA+AGG | - | chr5.1:10141845-10141864 | MS.gene71395:CDS | 45.0% | |
| GAGTCGGAATCAGCTTGATT+TGG | + | chr5.1:10142884-10142903 | None:intergenic | 45.0% | |
| GTTGAGAAAATGGGTCGCAT+TGG | - | chr5.1:10143088-10143107 | MS.gene71395:intron | 45.0% | |
| TATACAGGTGCACACACCTT+TGG | - | chr5.1:10142749-10142768 | MS.gene71395:intron | 45.0% | |
| TCTAGAGGTTCAAAGGGTGA+GGG | + | chr5.1:10142464-10142483 | None:intergenic | 45.0% | |
| TTCGTAGTGACAGGATCCAA+CGG | + | chr5.1:10142917-10142936 | None:intergenic | 45.0% | |
| ! | AGCTGATTCCGACTCCAATT+TGG | - | chr5.1:10142889-10142908 | MS.gene71395:intron | 45.0% |
| ! | TTCTAGAGGTTCAAAGGGTG+AGG | + | chr5.1:10142465-10142484 | None:intergenic | 45.0% |
| !! | ATGTGATGGATCTGTGCTAC+TGG | - | chr5.1:10142027-10142046 | MS.gene71395:intron | 45.0% |
| AAGGATGTAGCAGTGCTCTC+AGG | - | chr5.1:10142524-10142543 | MS.gene71395:intron | 50.0% | |
| AGGATCCAACGGAGCCAAAT+TGG | + | chr5.1:10142906-10142925 | None:intergenic | 50.0% | |
| CAACGGAGCCAAATTGGAGT+CGG | + | chr5.1:10142900-10142919 | None:intergenic | 50.0% | |
| CCAAGGCTATTCGACTTTGG+TGG | - | chr5.1:10142797-10142816 | MS.gene71395:intron | 50.0% | |
| CCACCAAAGTCGAATAGCCT+TGG | + | chr5.1:10142800-10142819 | None:intergenic | 50.0% | |
| CGGGACAACAGGGTCAAATA+AGG | - | chr5.1:10143119-10143138 | MS.gene71395:CDS | 50.0% | |
| GTACCTCTTGGTCGTAGAGA+TGG | - | chr5.1:10142404-10142423 | MS.gene71395:intron | 50.0% | |
| TCAGCACATGAGACTGTGGA+TGG | + | chr5.1:10142160-10142179 | None:intergenic | 50.0% | |
| ! | CCAAGAGGTACAGCCCAAAA+TGG | + | chr5.1:10142395-10142414 | None:intergenic | 50.0% |
| ! | CCATTTTGGGCTGTACCTCT+TGG | - | chr5.1:10142392-10142411 | MS.gene71395:intron | 50.0% |
| ! | CTATTCGACTTTGGTGGCTC+CGG | - | chr5.1:10142803-10142822 | MS.gene71395:intron | 50.0% |
| !! | AAAGCATTGCGCGAACCCAA+AGG | + | chr5.1:10142768-10142787 | None:intergenic | 50.0% |
| ATTTGCGTCGCTCTCACTCG+CGG | + | chr5.1:10142435-10142454 | None:intergenic | 55.0% | |
| GGTGTTCTTGCGGGACAACA+GGG | - | chr5.1:10143109-10143128 | MS.gene71395:CDS | 55.0% | |
| GTGCCATCTCTACGACCAAG+AGG | + | chr5.1:10142410-10142429 | None:intergenic | 55.0% | |
| TGGTGTTCTTGCGGGACAAC+AGG | - | chr5.1:10143108-10143127 | MS.gene71395:CDS | 55.0% | |
| ! | CGACTCCAATTTGGCTCCGT+TGG | - | chr5.1:10142898-10142917 | MS.gene71395:intron | 55.0% |
| ! | GGGTCGCATTGGTGTTCTTG+CGG | - | chr5.1:10143099-10143118 | MS.gene71395:CDS | 55.0% |
| ! | GGTCGCATTGGTGTTCTTGC+GGG | - | chr5.1:10143100-10143119 | MS.gene71395:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 10141187 | 10143165 | 10141187 | ID=MS.gene71395 |
| chr5.1 | mRNA | 10141187 | 10143165 | 10141187 | ID=MS.gene71395.t1;Parent=MS.gene71395 |
| chr5.1 | exon | 10143093 | 10143165 | 10143093 | ID=MS.gene71395.t1.exon1;Parent=MS.gene71395.t1 |
| chr5.1 | CDS | 10143093 | 10143165 | 10143093 | ID=cds.MS.gene71395.t1;Parent=MS.gene71395.t1 |
| chr5.1 | exon | 10142437 | 10142519 | 10142437 | ID=MS.gene71395.t1.exon2;Parent=MS.gene71395.t1 |
| chr5.1 | CDS | 10142437 | 10142519 | 10142437 | ID=cds.MS.gene71395.t1;Parent=MS.gene71395.t1 |
| chr5.1 | exon | 10142136 | 10142327 | 10142136 | ID=MS.gene71395.t1.exon3;Parent=MS.gene71395.t1 |
| chr5.1 | CDS | 10142136 | 10142327 | 10142136 | ID=cds.MS.gene71395.t1;Parent=MS.gene71395.t1 |
| chr5.1 | exon | 10141807 | 10141969 | 10141807 | ID=MS.gene71395.t1.exon4;Parent=MS.gene71395.t1 |
| chr5.1 | CDS | 10141807 | 10141969 | 10141807 | ID=cds.MS.gene71395.t1;Parent=MS.gene71395.t1 |
| chr5.1 | exon | 10141187 | 10141596 | 10141187 | ID=MS.gene71395.t1.exon5;Parent=MS.gene71395.t1 |
| chr5.1 | CDS | 10141187 | 10141596 | 10141187 | ID=cds.MS.gene71395.t1;Parent=MS.gene71395.t1 |
| Gene Sequence |
| Protein sequence |
