AlfalfaGEDB | MS.gene00160

M. sativa cultivar XinJiangDaYe / MS.gene00160

KEGG: -
GO: GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016620 GO:0016903 GO:0055114
PFAM: PF00171.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene00160.t1	XP_003594746.1	100	595	0	0	1	595	1	595	0.00E+00	1195.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene00160.t1	Q0WSF1	80.4	587	115	0	1	587	1	587	3.5e-287	988.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene00160.t1	A2Q2X1	100.0	595	0	0	1	595	1	595	0.0e+00	1195.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene93333	MS.gene00160	PPI
MS.gene33139	MS.gene00160	PPI
MS.gene073734	MS.gene00160	PPI
MS.gene009119	MS.gene00160	PPI
MS.gene43277	MS.gene00160	PPI
MS.gene049130	MS.gene00160	PPI
MS.gene00160	MS.gene042955	PPI
MS.gene066203	MS.gene00160	PPI
MS.gene016051	MS.gene00160	PPI
MS.gene52096	MS.gene00160	PPI
MS.gene64804	MS.gene00160	PPI
MS.gene04769	MS.gene00160	PPI
MS.gene00160	MS.gene012582	PPI
MS.gene033206	MS.gene00160	PPI
MS.gene88489	MS.gene00160	PPI
MS.gene015742	MS.gene00160	PPI
MS.gene035576	MS.gene00160	PPI
MS.gene038584	MS.gene00160	PPI
MS.gene56929	MS.gene00160	PPI
MS.gene015744	MS.gene00160	PPI
MS.gene69883	MS.gene00160	PPI
MS.gene05525	MS.gene00160	PPI
MS.gene65609	MS.gene00160	PPI
MS.gene042286	MS.gene00160	PPI
MS.gene038961	MS.gene00160	PPI
MS.gene90955	MS.gene00160	PPI
MS.gene62087	MS.gene00160	PPI
MS.gene62486	MS.gene00160	PPI
MS.gene48392	MS.gene00160	PPI
MS.gene00160	MS.gene60353	PPI
MS.gene00160	MS.gene60330	PPI
MS.gene000715	MS.gene00160	PPI
MS.gene60129	MS.gene00160	PPI
MS.gene052441	MS.gene00160	PPI
MS.gene05924	MS.gene00160	PPI
MS.gene016597	MS.gene00160	PPI
MS.gene042956	MS.gene00160	PPI
MS.gene052440	MS.gene00160	PPI
MS.gene59503	MS.gene00160	PPI
MS.gene61417	MS.gene00160	PPI
MS.gene61421	MS.gene00160	PPI
MS.gene05926	MS.gene00160	PPI
MS.gene00160	MS.gene035486	PPI
MS.gene025244	MS.gene00160	PPI
MS.gene056242	MS.gene00160	PPI
MS.gene00160	MS.gene045715	PPI
MS.gene25940	MS.gene00160	PPI
MS.gene04770	MS.gene00160	PPI
MS.gene037163	MS.gene00160	PPI
MS.gene64463	MS.gene00160	PPI
MS.gene00160	MS.gene038583	PPI
MS.gene040757	MS.gene00160	PPI
MS.gene56963	MS.gene00160	PPI
MS.gene057392	MS.gene00160	PPI
MS.gene00160	MS.gene022281	PPI
MS.gene70611	MS.gene00160	PPI
MS.gene00160	MS.gene67483	PPI
MS.gene057729	MS.gene00160	PPI
MS.gene05526	MS.gene00160	PPI
MS.gene90958	MS.gene00160	PPI
MS.gene003502	MS.gene00160	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene00160.t1	MTR_2g034160	100.000	595	0	0	1	595	1	595	0.0	1230
MS.gene00160.t1	MTR_2g067660	30.085	472	305	9	63	527	61	514	1.31e-62	215
MS.gene00160.t1	MTR_3g078170	30.655	473	308	9	62	528	75	533	3.43e-62	215
MS.gene00160.t1	MTR_4g106510	30.591	474	312	7	64	529	23	487	3.18e-60	208
MS.gene00160.t1	MTR_8g064170	30.078	512	319	11	26	528	51	532	7.65e-60	208
MS.gene00160.t1	MTR_6g086300	31.417	487	286	15	62	528	35	493	3.88e-59	206
MS.gene00160.t1	MTR_6g086300	31.417	487	286	15	62	528	35	493	3.88e-59	206
MS.gene00160.t1	MTR_8g083530	28.753	473	317	9	62	528	36	494	1.06e-58	204
MS.gene00160.t1	MTR_3g078550	29.958	474	313	9	64	528	23	486	1.97e-58	204
MS.gene00160.t1	MTR_3g078490	28.953	487	324	9	64	538	53	529	1.71e-57	202
MS.gene00160.t1	MTR_3g078550	30.435	460	301	9	78	528	7	456	9.41e-57	198
MS.gene00160.t1	MTR_4g107040	29.645	479	305	11	62	528	77	535	6.61e-56	198
MS.gene00160.t1	MTR_6g086340	28.964	473	314	10	62	527	33	490	2.61e-52	187
MS.gene00160.t1	MTR_8g064170	29.102	512	292	13	26	528	51	500	1.45e-51	185
MS.gene00160.t1	MTR_8g076480	27.778	468	308	8	87	540	8	459	7.27e-47	172
MS.gene00160.t1	MTR_4g131180	29.106	481	303	13	62	528	29	485	1.78e-46	171
MS.gene00160.t1	MTR_1g014320	28.513	491	313	13	52	528	19	485	6.74e-46	169
MS.gene00160.t1	MTR_3g078170	29.923	391	256	8	62	446	75	453	2.20e-45	167
MS.gene00160.t1	MTR_4g131180	29.252	441	275	12	62	488	29	446	9.03e-43	160
MS.gene00160.t1	MTR_8g083520	26.708	483	281	15	62	528	27	452	1.72e-42	159
MS.gene00160.t1	MTR_8g083520	30.641	359	195	8	180	528	58	372	6.53e-42	155
MS.gene00160.t1	MTR_1g029840	25.612	449	302	10	106	539	34	465	7.24e-41	155
MS.gene00160.t1	MTR_2g097950	26.829	451	299	10	96	535	35	465	1.63e-40	154
MS.gene00160.t1	MTR_8g094600	26.176	489	334	11	92	576	73	538	1.74e-40	155
MS.gene00160.t1	MTR_3g088150	25.390	449	303	10	106	539	36	467	1.98e-39	151
MS.gene00160.t1	MTR_1g029840	24.733	469	314	11	86	539	21	465	8.63e-39	149
MS.gene00160.t1	MTR_3g078170	29.268	369	243	8	62	424	75	431	4.42e-38	146
MS.gene00160.t1	MTR_3g078170	29.301	372	245	8	62	427	75	434	5.04e-38	146
MS.gene00160.t1	MTR_1314s0010	28.161	348	230	7	188	527	1	336	1.47e-35	137
MS.gene00160.t1	MTR_2g097950	25.727	447	274	10	96	535	35	430	2.31e-35	139
MS.gene00160.t1	MTR_8g083530	26.814	317	218	6	62	372	36	344	7.43e-29	118
MS.gene00160.t1	MTR_2g042330	23.617	470	335	8	56	516	27	481	2.40e-28	119
MS.gene00160.t1	MTR_1399s0020	33.043	230	136	4	318	547	136	347	2.50e-28	116
MS.gene00160.t1	MTR_3g078490	27.419	310	212	5	64	365	23	327	2.63e-28	117
MS.gene00160.t1	MTR_1222s0010	25.137	366	246	5	119	477	36	380	7.81e-28	119
MS.gene00160.t1	MTR_4g065040	28.916	415	268	11	110	514	27	424	3.02e-27	115
MS.gene00160.t1	MTR_1690s0010	26.686	341	219	9	62	388	22	345	8.95e-24	103
MS.gene00160.t1	MTR_4g093170	24.651	430	313	7	61	488	54	474	4.03e-23	103
MS.gene00160.t1	MTR_2g009750	24.533	428	305	10	66	488	31	445	7.14e-22	99.8
MS.gene00160.t1	MTR_2g009750	24.533	428	305	10	66	488	32	446	7.51e-22	99.8
MS.gene00160.t1	MTR_2g009750	24.299	428	307	9	66	488	32	447	8.05e-22	99.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene00160.t1	AT3G66658	80.272	588	116	0	1	588	1	588	0.0	1025
MS.gene00160.t1	AT3G66658	80.917	545	104	0	1	545	1	545	0.0	955
MS.gene00160.t1	AT1G74920	31.579	475	304	10	64	528	23	486	1.11e-62	215
MS.gene00160.t1	AT3G48170	30.738	488	312	13	64	537	23	498	1.70e-62	214
MS.gene00160.t1	AT1G23800	30.655	473	308	8	62	528	67	525	6.20e-61	211
MS.gene00160.t1	AT1G74920	32.192	438	281	9	96	528	55	481	1.81e-58	204
MS.gene00160.t1	AT3G48000	29.598	473	313	8	62	528	71	529	3.18e-58	204
MS.gene00160.t1	AT1G79440	28.511	470	313	8	64	527	68	520	1.75e-54	194
MS.gene00160.t1	AT3G24503	28.270	474	319	9	62	528	33	492	1.91e-54	193
MS.gene00160.t1	AT2G24270	29.253	482	301	13	62	528	29	485	4.56e-45	167
MS.gene00160.t1	AT2G24270	29.253	482	301	13	62	528	29	485	4.56e-45	167
MS.gene00160.t1	AT2G24270	29.132	484	303	13	60	528	27	485	5.20e-45	167
MS.gene00160.t1	AT2G24270	29.253	482	301	13	62	528	69	525	1.42e-44	166
MS.gene00160.t1	AT1G44170	25.050	499	341	10	87	578	11	483	4.42e-43	161
MS.gene00160.t1	AT1G44170	25.050	499	341	10	87	578	11	483	4.42e-43	161
MS.gene00160.t1	AT4G36250	26.196	439	297	8	86	514	6	427	2.68e-42	159
MS.gene00160.t1	AT1G44170	26.218	431	285	10	155	578	16	420	4.88e-40	151
MS.gene00160.t1	AT4G34240	25.740	439	297	9	82	514	76	491	5.23e-35	139
MS.gene00160.t1	AT4G34240	25.740	439	297	9	82	514	61	476	6.33e-35	139
MS.gene00160.t1	AT1G23800	29.688	320	205	6	62	372	67	375	9.33e-34	133
MS.gene00160.t1	AT4G34240	26.243	362	245	8	159	514	4	349	3.54e-31	126
MS.gene00160.t1	AT1G54100	23.077	468	334	10	57	514	27	478	1.33e-28	120
MS.gene00160.t1	AT1G54100	23.077	468	334	10	57	514	27	478	1.33e-28	120
MS.gene00160.t1	AT2G14170	24.027	437	307	9	61	488	17	437	3.12e-24	107
MS.gene00160.t1	AT2G14170	24.027	437	307	9	61	488	126	546	6.21e-24	106
MS.gene00160.t1	AT2G14170	24.027	437	307	9	61	488	126	546	6.51e-24	106
MS.gene00160.t1	AT4G34240	27.562	283	179	6	82	358	76	338	3.93e-18	87.0

Find 126 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTGCTAATGACTCAAAATA+TGG	0.189862	2.1:+58465742	MS.gene00160:CDS
GCCAGCCACCATGAAGTATT+TGG	0.227166	2.1:+58460404	MS.gene00160:CDS
TGGAAATGGAATTGTGATTA+AGG	0.231209	2.1:+58463280	MS.gene00160:CDS
TTGCAGGGCCCACCACTTGC+TGG	0.231865	2.1:+58465314	MS.gene00160:intron
CACAGTGGATTTGGACGATT+TGG	0.282231	2.1:+58466301	MS.gene00160:CDS
GTCAGGGCTGTTCTTCAGTC+AGG	0.294176	2.1:+58464391	MS.gene00160:CDS
TTCTTCCTCTAATGGCGTTT+TGG	0.295612	2.1:+58458976	None:intergenic
TAGTATCCTGTGGCAGAAAA+TGG	0.307985	2.1:+58466502	MS.gene00160:intron
CAACATGTGAGAAGATAAAT+TGG	0.311009	2.1:+58462645	MS.gene00160:CDS
AGAAAATGGATTTGAATTTC+AGG	0.311412	2.1:+58466516	MS.gene00160:CDS
GGCGTAAAACACAGTGGATT+TGG	0.317784	2.1:+58466292	MS.gene00160:CDS
GAACATTCTGAAAAGCTTCT+AGG	0.321342	2.1:+58465368	MS.gene00160:CDS
CCACCAAGCTCTAGTGTAAC+TGG	0.324494	2.1:-58464235	None:intergenic
CTCTACAGGTGGCAATAAAA+AGG	0.324927	2.1:+58466627	MS.gene00160:CDS
CTTACCAGGTTTGGTGAAAC+AGG	0.328288	2.1:+58463718	MS.gene00160:intron
CGCTATATGGTCTTAGCATA+TGG	0.333976	2.1:+58466554	MS.gene00160:CDS
ACTTGCTGGGAAGTATGATA+TGG	0.337654	2.1:+58465328	MS.gene00160:CDS
TCAGAGCTAAACTTCATTAT+CGG	0.341800	2.1:-58465703	None:intergenic
GACCTTGTTGAGGTGATAAC+AGG	0.357161	2.1:+58463615	MS.gene00160:CDS
TCACTTGTTGAAGCGCTATA+TGG	0.360016	2.1:+58466541	MS.gene00160:CDS
GCATTTGACTTATAGGCATT+TGG	0.361428	2.1:+58465670	MS.gene00160:intron
ATTGTTGCACGTGGAAGTTT+TGG	0.369745	2.1:+58465425	MS.gene00160:CDS
TTTGGGATTTCTTCCTGCTT+TGG	0.373547	2.1:+58460422	MS.gene00160:CDS
TCCTGCTTTGGCGCCGGATG+AGG	0.376504	2.1:+58460434	MS.gene00160:CDS
GGTATCTTTGTCTTAATGAA+TGG	0.385200	2.1:-58466385	None:intergenic
CCAGCCACCATGAAGTATTT+GGG	0.385798	2.1:+58460405	MS.gene00160:CDS
AGGATATCTTCACGTGATAC+TGG	0.386025	2.1:+58462584	MS.gene00160:intron
AAGGGGAACGGCGCAGCAAT+CGG	0.391886	2.1:+58460359	MS.gene00160:CDS
TGCAGGGCCCACCACTTGCT+GGG	0.393682	2.1:+58465315	MS.gene00160:intron
CTATGGCAGCAAGGGCTGAT+TGG	0.398099	2.1:-58463581	None:intergenic
GTAACTTTGCTGACAAAAGA+TGG	0.410535	2.1:-58464466	None:intergenic
TCAGAACATGCAAGTTGGTC+TGG	0.413232	2.1:+58463537	MS.gene00160:CDS
AACGTCGATCGAAGGAACTT+TGG	0.413262	2.1:-58459063	None:intergenic
AGACAGACCTGAATAGGCTT+TGG	0.415353	2.1:-58466406	None:intergenic
AAAGATACCAAAGCCTATTC+AGG	0.419183	2.1:+58466399	MS.gene00160:CDS
ACGTCGATCGAAGGAACTTT+GGG	0.420608	2.1:-58459062	None:intergenic
ATTTCTTCCTGCTTTGGCGC+CGG	0.425705	2.1:+58460428	MS.gene00160:CDS
AAGAAATCCCAAATACTTCA+TGG	0.426395	2.1:-58460412	None:intergenic
AGTCAGTAGTTGAAGATAGA+TGG	0.436417	2.1:+58466359	MS.gene00160:CDS
CTTGCATCAATTTCATTGAG+TGG	0.441509	2.1:-58465508	None:intergenic
TGCATCGAATTACATGTGTC+AGG	0.444184	2.1:+58465855	MS.gene00160:CDS
AACTTCATTATCGGCATGAT+AGG	0.455245	2.1:-58465694	None:intergenic
CTTCAACTACTGACTTTACA+AGG	0.459181	2.1:-58466351	None:intergenic
CCCAAATACTTCATGGTGGC+TGG	0.459911	2.1:-58460405	None:intergenic
AGGTTGCTCAAATTGCTGTC+AGG	0.459934	2.1:+58464374	MS.gene00160:intron
ATCACCTCAACAAGGTCCTC+TGG	0.461400	2.1:-58463609	None:intergenic
AAGGTCCTCTGGAGCTCCTA+TGG	0.461753	2.1:-58463598	None:intergenic
TTGCTAATGACTCAAAATAT+GGG	0.466403	2.1:+58465743	MS.gene00160:CDS
AGGGGAACGGCGCAGCAATC+GGG	0.468490	2.1:+58460360	MS.gene00160:CDS
ATGGGATCGTTTGCAAGCAT+TGG	0.469554	2.1:+58466573	MS.gene00160:CDS
CAAGGGCTGATTGGATGATC+CGG	0.470846	2.1:-58463572	None:intergenic
ATCACCTGGGGTTGGTAAGA+TGG	0.471554	2.1:+58463783	MS.gene00160:CDS
GATTGCTGCGCCGTTCCCCT+TGG	0.471929	2.1:-58460357	None:intergenic
TGCTGCGCCGTTCCCCTTGG+AGG	0.473549	2.1:-58460354	None:intergenic
GGACGATTTGGTGGTGTTGA+AGG	0.475260	2.1:+58466313	MS.gene00160:CDS
AGCGAATGCAAGAACGAGAA+TGG	0.478429	2.1:-58459003	None:intergenic
GATAAATTGGCTATTGTCAG+AGG	0.478430	2.1:+58462658	MS.gene00160:CDS
TTAATTGCAGTGTTGGAAGT+TGG	0.483090	2.1:+58459179	MS.gene00160:intron
ACCTCATCCGGCGCCAAAGC+AGG	0.483725	2.1:-58460435	None:intergenic
TCAGGGCTGTTCTTCAGTCA+GGG	0.485988	2.1:+58464392	MS.gene00160:CDS
AAGATGGATAAATGTTCCTA+TGG	0.486775	2.1:-58464450	None:intergenic
CTGGAGCTCCTATGGCAGCA+AGG	0.488303	2.1:-58463590	None:intergenic
TAGCTTCTCATATACATTGT+GGG	0.490188	2.1:+58465812	MS.gene00160:CDS
CTTACTGAGCAGAACTCTAC+AGG	0.491012	2.1:+58466613	MS.gene00160:CDS
TGGAGCTCCTATGGCAGCAA+GGG	0.495946	2.1:-58463589	None:intergenic
ATAGGCTCACAAACCTCATC+CGG	0.501686	2.1:-58460447	None:intergenic
CAATCAGCCCTTGCTGCCAT+AGG	0.506439	2.1:+58463582	MS.gene00160:CDS
TTTGTTGGATCACCTGGGGT+TGG	0.506824	2.1:+58463775	MS.gene00160:CDS
GCTATATGGTCTTAGCATAT+GGG	0.521718	2.1:+58466555	MS.gene00160:CDS
CTTGCTGGGAAGTATGATAT+GGG	0.534705	2.1:+58465329	MS.gene00160:CDS
AGGGCTGTTCTTCAGTCAGG+GGG	0.535804	2.1:+58464394	MS.gene00160:CDS
GAAGTTTAGCTCTGATGAAG+AGG	0.535852	2.1:+58465711	MS.gene00160:CDS
GTAAATGATGCTTTAGACAA+AGG	0.536332	2.1:+58465395	MS.gene00160:CDS
TTTCCAGTCTCTGCCATTTG+GGG	0.540605	2.1:+58466270	MS.gene00160:intron
CAAAGACTAGCTTCAAGCAA+AGG	0.543389	2.1:+58461142	MS.gene00160:CDS
GGTTGCTCAAATTGCTGTCA+GGG	0.546154	2.1:+58464375	MS.gene00160:intron
TCACATTCACAATCACAGTA+GGG	0.555942	2.1:-58465484	None:intergenic
TCAGGTGCCTCCAAGGGGAA+CGG	0.558856	2.1:+58460347	MS.gene00160:intron
TATATGAGAAGCTATCTCTC+TGG	0.559110	2.1:-58465803	None:intergenic
TGGTGAAACAGGAGAAGCAC+TGG	0.562872	2.1:+58463729	MS.gene00160:CDS
AATGAAATTGATGCAAGAAG+AGG	0.563532	2.1:+58465514	MS.gene00160:CDS
ATACCAGTTACACTAGAGCT+TGG	0.564045	2.1:+58464232	MS.gene00160:CDS
CCAGTTACACTAGAGCTTGG+TGG	0.568636	2.1:+58464235	MS.gene00160:CDS
AATGTTTGAAACCTGAGTAC+AGG	0.570318	2.1:+58462687	MS.gene00160:CDS
ACAATGGTAGATGCTTCTCT+AGG	0.573876	2.1:+58462611	MS.gene00160:CDS
AGCTTCTCATATACATTGTG+GGG	0.574125	2.1:+58465813	MS.gene00160:CDS
CAGGGCTGTTCTTCAGTCAG+GGG	0.574303	2.1:+58464393	MS.gene00160:CDS
GAAGCATCAACGTCGATCGA+AGG	0.577147	2.1:-58459071	None:intergenic
AGTGGATTTGGACGATTTGG+TGG	0.578426	2.1:+58466304	MS.gene00160:CDS
GAACTTTGGGAGGAATGAGA+AGG	0.580699	2.1:-58459049	None:intergenic
TCATACTTCCCAGCAAGTGG+TGG	0.583531	2.1:-58465323	None:intergenic
TCATCTGTCCTAGTATCCTG+TGG	0.591006	2.1:+58466492	MS.gene00160:intron
TTCCAGTCTCTGCCATTTGG+GGG	0.595438	2.1:+58466271	MS.gene00160:intron
ATCGACGTTGATGCTTCCGA+TGG	0.598509	2.1:+58459077	MS.gene00160:CDS
TTATTGGGGCCATTGTGTCG+TGG	0.599690	2.1:+58463207	MS.gene00160:CDS
GGAAGTTGGAAATCAATCGC+AGG	0.603674	2.1:+58459193	MS.gene00160:CDS
ATAGCTTCTCATATACATTG+TGG	0.604160	2.1:+58465811	MS.gene00160:CDS
TGAGACAGGTACCTGTACTC+AGG	0.604776	2.1:-58462698	None:intergenic
AGATATCAGAACATGCAAGT+TGG	0.612985	2.1:+58463532	MS.gene00160:intron
AATGGCCCCAATAACGCCAA+GGG	0.615997	2.1:-58463198	None:intergenic
TGGGAGGAATGAGAAGGAGA+AGG	0.623716	2.1:-58459043	None:intergenic
CAATGGCCCCAATAACGCCA+AGG	0.623770	2.1:-58463199	None:intergenic
TGCTGCCATAGGAGCTCCAG+AGG	0.624048	2.1:+58463593	MS.gene00160:CDS
CATACCATCTTACCAACCCC+AGG	0.625175	2.1:-58463787	None:intergenic
AGCTCCAGAGGACCTTGTTG+AGG	0.625959	2.1:+58463605	MS.gene00160:CDS
ATATCATACTTCCCAGCAAG+TGG	0.627095	2.1:-58465326	None:intergenic
TGTTTGTGAAGACGTAGATG+TGG	0.627212	2.1:+58464273	MS.gene00160:CDS
TTCACATTCACAATCACAGT+AGG	0.630142	2.1:-58465485	None:intergenic
CACATTCACAATCACAGTAG+GGG	0.639355	2.1:-58465483	None:intergenic
GGGCTGTTCTTCAGTCAGGG+GGG	0.644321	2.1:+58464395	MS.gene00160:CDS
CATACTTCCCAGCAAGTGGT+GGG	0.644953	2.1:-58465322	None:intergenic
GGGATAGTTCCACGACACAA+TGG	0.651870	2.1:-58463216	None:intergenic
GGAGCTGAAATTGTTGCACG+TGG	0.652524	2.1:+58465416	MS.gene00160:CDS
ATGAAGCATTGATCTTCCAG+AGG	0.652577	2.1:-58463150	None:intergenic
GCTTCATAAGAGAGCCAGAG+TGG	0.653340	2.1:+58463166	MS.gene00160:CDS
ACATTCACAATCACAGTAGG+GGG	0.657269	2.1:-58465482	None:intergenic
TTTATTCAGGTGCCTCCAAG+GGG	0.657310	2.1:+58460342	MS.gene00160:intron
ATAAATTGGCTATTGTCAGA+GGG	0.660827	2.1:+58462659	MS.gene00160:CDS
TCGATCGAAGGAACTTTGGG+AGG	0.662771	2.1:-58459059	None:intergenic
ACCTTGTTGAGGTGATAACA+GGG	0.667865	2.1:+58463616	MS.gene00160:CDS
CAGTAGTTGAAGATAGATGG+TGG	0.670419	2.1:+58466362	MS.gene00160:CDS
ATGGCCCCAATAACGCCAAG+GGG	0.691262	2.1:-58463197	None:intergenic
ACTGAGCAGAACTCTACAGG+TGG	0.704579	2.1:+58466616	MS.gene00160:CDS
ACCCTGTTATCACCTCAACA+AGG	0.707587	2.1:-58463617	None:intergenic
AAATCCCAAATACTTCATGG+TGG	0.723996	2.1:-58460409	None:intergenic
TGGCCCCAATAACGCCAAGG+GGG	0.740602	2.1:-58463196	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	58458987	58466657	58458987	ID=MS.gene00160
chr2.1	mRNA	58458987	58466657	58458987	ID=MS.gene00160.t1;Parent=MS.gene00160
chr2.1	exon	58458987	58459098	58458987	ID=MS.gene00160.t1.exon1;Parent=MS.gene00160.t1
chr2.1	CDS	58458987	58459098	58458987	ID=cds.MS.gene00160.t1;Parent=MS.gene00160.t1
chr2.1	exon	58459189	58459232	58459189	ID=MS.gene00160.t1.exon2;Parent=MS.gene00160.t1
chr2.1	CDS	58459189	58459232	58459189	ID=cds.MS.gene00160.t1;Parent=MS.gene00160.t1
chr2.1	exon	58460351	58460455	58460351	ID=MS.gene00160.t1.exon3;Parent=MS.gene00160.t1
chr2.1	CDS	58460351	58460455	58460351	ID=cds.MS.gene00160.t1;Parent=MS.gene00160.t1
chr2.1	exon	58461096	58461223	58461096	ID=MS.gene00160.t1.exon4;Parent=MS.gene00160.t1
chr2.1	CDS	58461096	58461223	58461096	ID=cds.MS.gene00160.t1;Parent=MS.gene00160.t1
chr2.1	exon	58462586	58462708	58462586	ID=MS.gene00160.t1.exon5;Parent=MS.gene00160.t1
chr2.1	CDS	58462586	58462708	58462586	ID=cds.MS.gene00160.t1;Parent=MS.gene00160.t1
chr2.1	exon	58463148	58463301	58463148	ID=MS.gene00160.t1.exon6;Parent=MS.gene00160.t1
chr2.1	CDS	58463148	58463301	58463148	ID=cds.MS.gene00160.t1;Parent=MS.gene00160.t1
chr2.1	exon	58463534	58463637	58463534	ID=MS.gene00160.t1.exon7;Parent=MS.gene00160.t1
chr2.1	CDS	58463534	58463637	58463534	ID=cds.MS.gene00160.t1;Parent=MS.gene00160.t1
chr2.1	exon	58463726	58463804	58463726	ID=MS.gene00160.t1.exon8;Parent=MS.gene00160.t1
chr2.1	CDS	58463726	58463804	58463726	ID=cds.MS.gene00160.t1;Parent=MS.gene00160.t1
chr2.1	exon	58464205	58464300	58464205	ID=MS.gene00160.t1.exon9;Parent=MS.gene00160.t1
chr2.1	CDS	58464205	58464300	58464205	ID=cds.MS.gene00160.t1;Parent=MS.gene00160.t1
chr2.1	exon	58464376	58464513	58464376	ID=MS.gene00160.t1.exon10;Parent=MS.gene00160.t1
chr2.1	CDS	58464376	58464513	58464376	ID=cds.MS.gene00160.t1;Parent=MS.gene00160.t1
chr2.1	exon	58465320	58465535	58465320	ID=MS.gene00160.t1.exon11;Parent=MS.gene00160.t1
chr2.1	CDS	58465320	58465535	58465320	ID=cds.MS.gene00160.t1;Parent=MS.gene00160.t1
chr2.1	exon	58465685	58465876	58465685	ID=MS.gene00160.t1.exon12;Parent=MS.gene00160.t1
chr2.1	CDS	58465685	58465876	58465685	ID=cds.MS.gene00160.t1;Parent=MS.gene00160.t1
chr2.1	exon	58466277	58466420	58466277	ID=MS.gene00160.t1.exon13;Parent=MS.gene00160.t1
chr2.1	CDS	58466277	58466420	58466277	ID=cds.MS.gene00160.t1;Parent=MS.gene00160.t1
chr2.1	exon	58466505	58466657	58466505	ID=MS.gene00160.t1.exon14;Parent=MS.gene00160.t1
chr2.1	CDS	58466505	58466657	58466505	ID=cds.MS.gene00160.t1;Parent=MS.gene00160.t1

Gene Sequence

>MS.gene00160

ATGGCGTTTTGGTGGTCCATTCTCGTTCTTGCATTCGCTTTCGCTATCTGCAAGTTCCTTCTCCTTCTCATTCCTCCCAAAGTTCCTTCGATCGACGTTGATGCTTCCGATGGTAATCTTCTTCGTTCATTCTTTTGCGTGTGAATTTGTTGTGAACTGTGAAAATGTAACGTTGATTTTGTTTTTGTTTGATTAATTGCAGTGTTGGAAGTTGGAAATCAATCGCAGGAGAATAATTTCATATATGTGAGTAGTGATTTGATGCTTTTATTTATTTTGTTCATACATTTCTTTGATGCTTGGATAATTGAGATCTTGATGATGTGTTTAGTTTAATTTTGTTAGATCGATTTGGTTTTACTTTTGGATTTGAAATTTGAAATTAGAGTTCACTTTGATTGTAAATTGTGGTGACGAATTGATTTAATTTTATCTTGTGAAGCAACTGACACCATACATGACACGACACAGACACGAAACTGTCACTTGACACCCGTAAAAAAATTGAAAAAAAATAAAGAATTTAATTAGTATACATGGTTAATGTACAATTATTTTACACATTCAATGATGTAAAATTGAAAAAAATTCTTAAGAACTTAGTTAGTAAACACATAAGTGTACAATTATTTTACACATGCATTCAATGATGTGCTGCCACTTCAATTAATAAATATTCATCATTGGATGCATGTGTAAAATAACTCTACCTGGTCGGTGCATAGTAATTAAACTCTTAATTAAATGTAATCGCATGTGTCAGTGTCTGACACTAACATGTCTGACACACCGAACACGTCTTCTATCAGAAGTGACAGTGCTACAACTTATGGACTGTTTGGATTTGAGTTTATCTAGTGACAATGGCTTAGACACTTGTGAAACTACTGTTTGGATTGGCTTATTTTTTAGCTTATGCAAAACAGATTATGCAAACAAATAAGCTTTTATGTATTATTCATAAGCTTGTCAAGGTAGTTTATGAAAAAATAGCTTATGAAGATACAATTTTCGTTAACAAGAACTTATGAATTAACATAAAAGGTTATTTATTTGTATAAGCTATTTTTCATAAGCTCAAAAATAAGCCAATCCAAACGGACCGTTAGAGTTTATGGAAGCAGCTTATGACATGTCCATAAGTTGTTTGTAGCTTATTTTTGTAAGCTCTCCATAATAGCTTATGAAAACAACTTATAGCTAGCTTATATGAAAACAATTTGAATTATGCTATCTTTTATTATAGAAATAGCTTATACAAAGCGCTTAATTAAGCTGTTTATCCAAACAGGGCCTTAGCGTTAGTGGTTTGTAATTTTTTCCCCTTTTTGGAGAATCCAGTTGATCGATTGCTTTTTATTCAGGTGCCTCCAAGGGGAACGGCGCAGCAATCGGGCAAGAAAGTTCAGTGCTATGAGCCAGCCACCATGAAGTATTTGGGATTTCTTCCTGCTTTGGCGCCGGATGAGGTTTGTGAGCCTATGCTTATTGCTTCTCAAGAGACTTATGATTGAGATGCATAATTTAACTAACTGAAAAGCAAGCGGCCATGAAATATTTGGAATATGATGCATAGTATAGCTAAGATAGCAAGGAACTAGTAGTTTTAGATGCACAATGCCTATTTGAATGGAGTATTTTTTTTAATTGATAGTGTCAAAAGTTTACATAGTCTTCTAATCATAACTCACCAGGATGCCTCTGTTATATTACTTCTAAAATTATCCCATCAGATATCTACCCGGTGAGATATATGATAGGATGATTGTGTAAATTTTTTGATACCCTCTTAGCGCATAGTCATTAAACTCCTTTTTTATTTATTTAATGTTTATGCAAGTATTATATTTAGAAATAAGAAACCTCAAAATTTATACAGAGACAAAAAAATATCAAAGGGAATAAAACTAGTTGGGCTGAGTAGCTCGTGAGTTTGTTTTGTTCACTTGTATTTCATATGAGTTATGCCAGCACTCAAGAAGCCATAAATATGAATAAGAACAAAGTTATTGCAAGAGTGTTCATAAAATATTATACCAGTTTGACTAATTTCATTCATGGGTTAATGTATTGCCATAGTTAACTTGTACTAATTTGAGATATGGATAGGTCAAGGAGCGAATTGAAAAAGTACGGAAGGCACAAAAAATGTGGGCAAAGACTAGCTTCAAGCAAAGGCGCCAGTTTTTACGTATACTACTGAAGTATATAATTAAACATCAAGCACTTATTTGCGAGTAAGACCACTTCAATTCCATGGTCATAGTTTGAAGATCAGGTGTTAGTTTTATTTTTAGGCTTAATTTCACTTTTGGCCCCCCAAGTTTCACAATTGTGCAATTTTGCCGCCCCTCAAGTTTAAAATGAGTGATTTTGACTCCTTAAGTTTGCCTCCTTTTGCACTTACTAGTCCCCATGCACATTTTGACCAAAAAATGATGATGTGGCTAATTTCAATGACATGGCATATCTCTGTGTTCGCCAATGTGGAAATTAACATTTTTTTAAAAAAAATTTAAAAAAAAGAGGAAATCAGTTTTATTTTAATTTTATTTCTTCTGAATTTTAATTAATTGTTTTCACACTCCCTCTTTATTTTAGTTTTACCAATAATTTTCCTTCTTAATTTTCACTCTAGTTTCAGTTTCCCCCTTCCCTTCTTTCAAGTTTGGAGCCAATAACCATAAAGTCTCAACTTAATCGTCTATACATACCGCAGAAAATGTGTGAACCAAACTAATACTCAATCATACTAGTCAAAAAACTCAAATTATCCACAAAAATGCAGCGTTGATAAAAACACGCATGTATCCCCCGTGAGCTTAGCTCAGTTGGTAGGGATAATGCATAATATATGCAAGGTCTGGGGTTCGAATCCCAGACACCACCAAAAAAAGATAAAACACGCATGCAACATGTATATCTAAGTGTTTGATTCTACTGTTTAACACAATTGTATCATATCCTACTTATAACATATTTCAATATATCACAATGTACTAGTGGATAAGCAATTAGATATATTAGCAGATAGGAGGCTTGGTTGGAGGTGGGACTGGGGGTGCTATCTATGGAAGAAATGGGGTGCTCTGTAGAGTAGTTCATATGTGAAAAAATTAATTAAAATTGAGCAGAAATATATATAAAAAAAAAAAAAAAGTATCATTAAGAGTTCAATCTGAAAAAGAAAAAAAAAACTGATTTCTTTCTTTTTTTTTTAAATGTTAATTTCAACATTGGCGAACACATGGAAATGCTACGTCATGACAATTAGCCACGTTATTATTTTTTGGTCAAAATATGCATGGGGGACTAGTAAGGGTAAAAGGGGCTAAAATCACTCATTTTAAACTTGGGGGACCAAAATCGCACAATTGTGAAACTTTAGGGGCCAAAATGCAATTAAGCCTTATTTTTATTTTTATTTTTATTTTTAAAGAGAAAACTTATTTAATGTTGCATTTGTGAGTTGTGACATCCTGGCGAACATGCAGTTTTTAGCATAGTTTTAATTGTTAGTCTGAAAAATGGATTTGAACTGGGCTTGTTGCATAAGAATATCAATATGAGATAAATTCTAACTTGTGTCCTTTTATTAGGATATCTTCACGTGATACTGGAAAAACAATGGTAGATGCTTCTCTAGGAGAAATAATGACAACATGTGAGAAGATAAATTGGCTATTGTCAGAGGGTGAAAAATGTTTGAAACCTGAGTACAGGTACCTGTCTCAATCTTTTTTGTGTTTTACTAATAATTTTATCATCTTACTTTAGACTGAAAACACTAGTAGTTCTCTGCATGTCTTTATTTATTCGTGTTTTACTAATAATTTTATCATCTTACTTTAGACTGAAAACACTAGTAGTTCTCTGCATGTCTTTATTTATTCAAAAGAAAACAATACCCCCTCCCACAATCCCAGTAATTGACTCTTTTCTCTGCTTAAATTGACTCTTTTCTATGCTTAAATTGACTTATGTTAAATTGTCTATCATTTTATTTTCTTTGTTCTTTACTATATGCTTTCTTTTGCTTCCTACAGTTTTTTTTTTTTTCTTTTTTCATGTAAATAAAGAATGTTTCTGTGTTAATATCGCAAATTAGCTAATTCACTTTCATGACCACCTTTTGTTTTGCAATACATTAAAAACATGCAGATCCTCTGGAAGATCAATGCTTCATAAGAGAGCCAGAGTGGAATTTCACCCCCTTGGCGTTATTGGGGCCATTGTGTCGTGGAACTATCCCTTCCATAATATTTTTAACCCTATGCTAGCAGCAGTTTTTTCTGGAAATGGAATTGTGATTAAGGTATAAAATGACTTAATATGTACTGTGTATACCTTCTCTAAAATTGTTCATCATATGGATGGATTACCATGTTTTTATGAAAGTAGATATTGTTAACTGTCAGGCAGCCTGACAGTTAACAATGTTCCATTAACACTTGATACTAAAAATTGAGACTCTGCAACATGCAACACCTACTCCTCTGTGTTTATATTTTTCAGTTTGACAGAAATCCTTGTGATTCTGATTGTAGATATCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATCATCCAATCAGCCCTTGCTGCCATAGGAGCTCCAGAGGACCTTGTTGAGGTGATAACAGGGTAGAGCCTTATTTTGCACCCTCCCTTTTTTCCTTTAATTTCAAAGTCATGTCTGCATCTATAATCTCAATTGGACCTTTCTTACCAGGTTTGGTGAAACAGGAGAAGCACTGGTGTCTTCTGTAGATAAAGTCATTTTTGTTGGATCACCTGGGGTTGGTAAGATGGTATGGTTCCTTAAGCCAATCAAATTGGTTCATCCTGTCCTGTCTTCTGTGAATTGCATCACATAGTAGTTTTATTTATGATTCTTAAAATATAGTTTATGATATGTTGTGCATCATATATGTTTAGTAAAGAATTTTCCTAGAATACTTGGTCAATGTTTAGAGTAGCATTTGGAGCAGCTGAATCCCCATTTTGTACTCACAAAAGAAAAGAGTAACATCAAAAGTTGTAGTATACCTCTAGTCTAAACAGCGACGCCCGTTAAGCAAAATCAGTGAGTGAGATAGTTTGGGGCTTTTTGTCTACTTTTCCGTATATGCTTCTTCTATTCTTTCCGAGATGTTCCATGCAATGAGTAGTCTTTTGCACGTTGATAATATCATTTGTTCTTTTATGCAGATAATGAAAAATGCTTCTGAGACACTTATACCAGTTACACTAGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGACGTAGATGTGGACCATGTATGAATACCTTCCCCATTATGCATTCGTTGTTGAATTCCATAGTTTTAACACTCACTAATCTGCTGAATGTAGGTTGCTCAAATTGCTGTCAGGGCTGTTCTTCAGTCAGGGGGGCAGAACTGTGCTGGTGCTGAACGATTTTATGTCCATAGGAACATTTATCCATCTTTTGTCAGCAAAGTTACCAAAATCATAAAATCTGTTACAGCTGTAAGTGTTTATGCAAGTGTTTTTCCATGACCTTTCATTTGTAACATCTGTCTTGTGCAATTTCTTTCCAAGTCAACATGGGCTTCTTGTCACATTTGCCTGCACTTGATTCTTACAGAATTGCTATATCACATGTCCACCAGCTTAACTTTACATTGGTTCTAGTTTATTATGAAATTTTGCAAGACGGTTGTATGATTCATGATATGTTGTTTTTCCTCTATTTTTGTTGCATTTCTGCATGTCTCGTTTTCTATTTTCCTTAGAGGAGAGAAGAGAAAGAAATAAAGAGTCTGAGTTATGATGATGATTTTATACAATTTACTAAACACGACCCTTATTTATATTTATACTGAACTTCTAATCCTAATTAAATAAGGAAAAATATCATGAAATCTAAAGAGATAGAGAAACCAATCTTCAGAGATAATCTATGATATTCTCAATTACTTTAGCACAACTCAGTATTATGTGTTCTTTGTTTTTTAATGTTATGACATAGATTGTTATTTATTAGACTGAAGTGTTAATATATGGCAAATTGTTAAATGATTGTTATTCTTCAAATAACTAATGCTGAGAAGTTGGGATCTATGATTAGATAATAGATATACTGATGAGAGGAAGGGACAAAAATGTCATGAAGTTGTATAAATCCCACAGATTATATTAACATTGAAAACTGAGGACTTCTGTATGAGCAAGAACTATATTTTCACTTATTAATGGAGCATAGGGGTCTTCCGCAAAATATTTAGTATTAAGAAGTCCGTTCTTTAAAGCTTTTGGTTAATGATTTCTTGCAGGGCCCACCACTTGCTGGGAAGTATGATATGGGAGCTTTATGCATGCATGAACATTCTGAAAAGCTTCTAGGTCTTGTAAATGATGCTTTAGACAAAGGAGCTGAAATTGTTGCACGTGGAAGTTTTGGACATATAGGCGAAGATGCTGTTGATCAGTATTTTCCCCCTACTGTGATTGTGAATGTGAACCACTCAATGAAATTGATGCAAGAAGAGGTAGCAAACCTTTACTACAAGCATTGGATATTTTGAAATTTGAAAAACTGATTCTCATGTAGTGCAACCAACTATTATTTGAAAATGTCTTCCTATCTTGTATGCTCCAACAACTGCTTACTAGATTCATCTGTGCATTTGACTTATAGGCATTTGGACCTATCATGCCGATAATGAAGTTTAGCTCTGATGAAGAGGTTATCAAGCTTGCTAATGACTCAAAATATGGGCTCAGCTGTGCTGTTTTCTCAGGCAGTCAAAGTCATGCCAGAGAGATAGCTTCTCATATACATTGTGGGGTTGCTGCAGTTAATGATTTTGCATCGAATTACATGTGTCAGGTAAAATTTGATTTTAAATAGTTTATCTCTCGCTCCATGTTTGCGTGTCACCTGAAAGGGACCTAGTAGTAGCGTGATATGATGTGTGCTTTGTTGATATCATCCATTGCTAAAGAACAAGAGAAACAACTAAAATATTAGGAGCATGGTTGTGAAATTCAGACTAGACTGGCCAATCTAACGTTTTGTTCACAGTCCTATAGAACTAGCTTGAACCGGATAGAATCATGGTTCAAATGCAATTGGTTCAGTCGGTCATTATTATTTTTTTTTTATTTTTTTTTTAATTAAAAAATTTTTGTACATTTTGTTTTAGTACTGTCGGTATATGTTCCTAATTCAACCTGCGTGTACCTTTTTAAATTTCCATTGAAGCAAAGTTGCATTCTGATTTTTCCAGTCTCTGCCATTTGGGGGCGTAAAACACAGTGGATTTGGACGATTTGGTGGTGTTGAAGGCTTGCGAGCATGCTGCCTTGTAAAGTCAGTAGTTGAAGATAGATGGTGGCCATTCATTAAGACAAAGATACCAAAGCCTATTCAGGTCTGTCTAAAAAACCTTTCATTATATCATACAAACTACACTGTTAGTGGATAGATACTGAGATGCACTTTTCATCTGTCCTAGTATCCTGTGGCAGAAAATGGATTTGAATTTCAGGAGTCACTTGTTGAAGCGCTATATGGTCTTAGCATATGGGATCGTTTGCAAGCATTGGTAAACGTTTTGAAAATGCTTACTGAGCAGAACTCTACAGGTGGCAATAAAAAGGAGAAATGA

Protein sequence

>MS.gene00160.t1

MAFWWSILVLAFAFAICKFLLLLIPPKVPSIDVDASDVLEVGNQSQENNFIYVPPRGTAQQSGKKVQCYEPATMKYLGFLPALAPDEVKERIEKVRKAQKMWAKTSFKQRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEKCLKPEYRSSGRSMLHKRARVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFGETGEALVSSVDKVIFVGSPGVGKMIMKNASETLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSGGQNCAGAERFYVHRNIYPSFVSKVTKIIKSVTAGPPLAGKYDMGALCMHEHSEKLLGLVNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHSMKLMQEEAFGPIMPIMKFSSDEEVIKLANDSKYGLSCAVFSGSQSHAREIASHIHCGVAAVNDFASNYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKSVVEDRWWPFIKTKIPKPIQYPVAENGFEFQESLVEALYGLSIWDRLQALVNVLKMLTEQNSTGGNKKEK