AlfalfaGEDB | MS.gene55995

M. sativa cultivar XinJiangDaYe / MS.gene55995

KEGG: -
GO: GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016620 GO:0016903 GO:0055114
PFAM: PF00171.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene55995.t1	XP_003594746.1	100	595	0	0	1	595	1	595	0.00E+00	1195.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene55995.t1	Q0WSF1	80.4	587	115	0	1	587	1	587	3.5e-287	988.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene55995.t1	A2Q2X1	100.0	595	0	0	1	595	1	595	0.0e+00	1195.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene058231	MS.gene55995	0.962869	2.15E-121	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene93333	MS.gene55995	PPI
MS.gene60353	MS.gene55995	PPI
MS.gene33139	MS.gene55995	PPI
MS.gene61421	MS.gene55995	PPI
MS.gene073734	MS.gene55995	PPI
MS.gene009119	MS.gene55995	PPI
MS.gene56929	MS.gene55995	PPI
MS.gene43277	MS.gene55995	PPI
MS.gene049130	MS.gene55995	PPI
MS.gene066203	MS.gene55995	PPI
MS.gene55995	MS.gene042955	PPI
MS.gene016051	MS.gene55995	PPI
MS.gene64804	MS.gene55995	PPI
MS.gene038583	MS.gene55995	PPI
MS.gene04769	MS.gene55995	PPI
MS.gene033206	MS.gene55995	PPI
MS.gene55995	MS.gene012582	PPI
MS.gene88489	MS.gene55995	PPI
MS.gene015742	MS.gene55995	PPI
MS.gene035576	MS.gene55995	PPI
MS.gene038584	MS.gene55995	PPI
MS.gene015744	MS.gene55995	PPI
MS.gene69883	MS.gene55995	PPI
MS.gene05525	MS.gene55995	PPI
MS.gene65609	MS.gene55995	PPI
MS.gene042286	MS.gene55995	PPI
MS.gene038961	MS.gene55995	PPI
MS.gene025244	MS.gene55995	PPI
MS.gene90955	MS.gene55995	PPI
MS.gene62087	MS.gene55995	PPI
MS.gene62486	MS.gene55995	PPI
MS.gene48392	MS.gene55995	PPI
MS.gene000715	MS.gene55995	PPI
MS.gene60129	MS.gene55995	PPI
MS.gene55995	MS.gene60330	PPI
MS.gene052441	MS.gene55995	PPI
MS.gene05924	MS.gene55995	PPI
MS.gene040757	MS.gene55995	PPI
MS.gene016597	MS.gene55995	PPI
MS.gene042956	MS.gene55995	PPI
MS.gene052440	MS.gene55995	PPI
MS.gene59503	MS.gene55995	PPI
MS.gene61417	MS.gene55995	PPI
MS.gene05926	MS.gene55995	PPI
MS.gene045715	MS.gene55995	PPI
MS.gene056242	MS.gene55995	PPI
MS.gene25940	MS.gene55995	PPI
MS.gene04770	MS.gene55995	PPI
MS.gene022281	MS.gene55995	PPI
MS.gene037163	MS.gene55995	PPI
MS.gene52096	MS.gene55995	PPI
MS.gene64463	MS.gene55995	PPI
MS.gene035486	MS.gene55995	PPI
MS.gene56963	MS.gene55995	PPI
MS.gene057392	MS.gene55995	PPI
MS.gene70611	MS.gene55995	PPI
MS.gene057729	MS.gene55995	PPI
MS.gene05526	MS.gene55995	PPI
MS.gene90958	MS.gene55995	PPI
MS.gene003502	MS.gene55995	PPI
MS.gene55995	MS.gene67483	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene55995.t1	MTR_2g034160	100.000	595	0	0	1	595	1	595	0.0	1230
MS.gene55995.t1	MTR_2g067660	30.085	472	305	9	63	527	61	514	1.31e-62	215
MS.gene55995.t1	MTR_3g078170	30.655	473	308	9	62	528	75	533	3.43e-62	215
MS.gene55995.t1	MTR_4g106510	30.591	474	312	7	64	529	23	487	3.18e-60	208
MS.gene55995.t1	MTR_8g064170	30.078	512	319	11	26	528	51	532	7.65e-60	208
MS.gene55995.t1	MTR_6g086300	31.417	487	286	15	62	528	35	493	3.88e-59	206
MS.gene55995.t1	MTR_6g086300	31.417	487	286	15	62	528	35	493	3.88e-59	206
MS.gene55995.t1	MTR_8g083530	28.753	473	317	9	62	528	36	494	1.06e-58	204
MS.gene55995.t1	MTR_3g078550	29.958	474	313	9	64	528	23	486	1.97e-58	204
MS.gene55995.t1	MTR_3g078490	28.953	487	324	9	64	538	53	529	1.71e-57	202
MS.gene55995.t1	MTR_3g078550	30.435	460	301	9	78	528	7	456	9.41e-57	198
MS.gene55995.t1	MTR_4g107040	29.645	479	305	11	62	528	77	535	6.61e-56	198
MS.gene55995.t1	MTR_6g086340	28.964	473	314	10	62	527	33	490	2.61e-52	187
MS.gene55995.t1	MTR_8g064170	29.102	512	292	13	26	528	51	500	1.45e-51	185
MS.gene55995.t1	MTR_8g076480	27.778	468	308	8	87	540	8	459	7.27e-47	172
MS.gene55995.t1	MTR_4g131180	29.106	481	303	13	62	528	29	485	1.78e-46	171
MS.gene55995.t1	MTR_1g014320	28.513	491	313	13	52	528	19	485	6.74e-46	169
MS.gene55995.t1	MTR_3g078170	29.923	391	256	8	62	446	75	453	2.20e-45	167
MS.gene55995.t1	MTR_4g131180	29.252	441	275	12	62	488	29	446	9.03e-43	160
MS.gene55995.t1	MTR_8g083520	26.708	483	281	15	62	528	27	452	1.72e-42	159
MS.gene55995.t1	MTR_8g083520	30.641	359	195	8	180	528	58	372	6.53e-42	155
MS.gene55995.t1	MTR_1g029840	25.612	449	302	10	106	539	34	465	7.24e-41	155
MS.gene55995.t1	MTR_2g097950	26.829	451	299	10	96	535	35	465	1.63e-40	154
MS.gene55995.t1	MTR_8g094600	26.176	489	334	11	92	576	73	538	1.74e-40	155
MS.gene55995.t1	MTR_3g088150	25.390	449	303	10	106	539	36	467	1.98e-39	151
MS.gene55995.t1	MTR_1g029840	24.733	469	314	11	86	539	21	465	8.63e-39	149
MS.gene55995.t1	MTR_3g078170	29.268	369	243	8	62	424	75	431	4.42e-38	146
MS.gene55995.t1	MTR_3g078170	29.301	372	245	8	62	427	75	434	5.04e-38	146
MS.gene55995.t1	MTR_1314s0010	28.161	348	230	7	188	527	1	336	1.47e-35	137
MS.gene55995.t1	MTR_2g097950	25.727	447	274	10	96	535	35	430	2.31e-35	139
MS.gene55995.t1	MTR_8g083530	26.814	317	218	6	62	372	36	344	7.43e-29	118
MS.gene55995.t1	MTR_2g042330	23.617	470	335	8	56	516	27	481	2.40e-28	119
MS.gene55995.t1	MTR_1399s0020	33.043	230	136	4	318	547	136	347	2.50e-28	116
MS.gene55995.t1	MTR_3g078490	27.419	310	212	5	64	365	23	327	2.63e-28	117
MS.gene55995.t1	MTR_1222s0010	25.137	366	246	5	119	477	36	380	7.81e-28	119
MS.gene55995.t1	MTR_4g065040	28.916	415	268	11	110	514	27	424	3.02e-27	115
MS.gene55995.t1	MTR_1690s0010	26.686	341	219	9	62	388	22	345	8.95e-24	103
MS.gene55995.t1	MTR_4g093170	24.651	430	313	7	61	488	54	474	4.03e-23	103
MS.gene55995.t1	MTR_2g009750	24.533	428	305	10	66	488	31	445	7.14e-22	99.8
MS.gene55995.t1	MTR_2g009750	24.533	428	305	10	66	488	32	446	7.51e-22	99.8
MS.gene55995.t1	MTR_2g009750	24.299	428	307	9	66	488	32	447	8.05e-22	99.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene55995.t1	AT3G66658	80.272	588	116	0	1	588	1	588	0.0	1025
MS.gene55995.t1	AT3G66658	80.917	545	104	0	1	545	1	545	0.0	955
MS.gene55995.t1	AT1G74920	31.579	475	304	10	64	528	23	486	1.11e-62	215
MS.gene55995.t1	AT3G48170	30.738	488	312	13	64	537	23	498	1.70e-62	214
MS.gene55995.t1	AT1G23800	30.655	473	308	8	62	528	67	525	6.20e-61	211
MS.gene55995.t1	AT1G74920	32.192	438	281	9	96	528	55	481	1.81e-58	204
MS.gene55995.t1	AT3G48000	29.598	473	313	8	62	528	71	529	3.18e-58	204
MS.gene55995.t1	AT1G79440	28.511	470	313	8	64	527	68	520	1.75e-54	194
MS.gene55995.t1	AT3G24503	28.270	474	319	9	62	528	33	492	1.91e-54	193
MS.gene55995.t1	AT2G24270	29.253	482	301	13	62	528	29	485	4.56e-45	167
MS.gene55995.t1	AT2G24270	29.253	482	301	13	62	528	29	485	4.56e-45	167
MS.gene55995.t1	AT2G24270	29.132	484	303	13	60	528	27	485	5.20e-45	167
MS.gene55995.t1	AT2G24270	29.253	482	301	13	62	528	69	525	1.42e-44	166
MS.gene55995.t1	AT1G44170	25.050	499	341	10	87	578	11	483	4.42e-43	161
MS.gene55995.t1	AT1G44170	25.050	499	341	10	87	578	11	483	4.42e-43	161
MS.gene55995.t1	AT4G36250	26.196	439	297	8	86	514	6	427	2.68e-42	159
MS.gene55995.t1	AT1G44170	26.218	431	285	10	155	578	16	420	4.88e-40	151
MS.gene55995.t1	AT4G34240	25.740	439	297	9	82	514	76	491	5.23e-35	139
MS.gene55995.t1	AT4G34240	25.740	439	297	9	82	514	61	476	6.33e-35	139
MS.gene55995.t1	AT1G23800	29.688	320	205	6	62	372	67	375	9.33e-34	133
MS.gene55995.t1	AT4G34240	26.243	362	245	8	159	514	4	349	3.54e-31	126
MS.gene55995.t1	AT1G54100	23.077	468	334	10	57	514	27	478	1.33e-28	120
MS.gene55995.t1	AT1G54100	23.077	468	334	10	57	514	27	478	1.33e-28	120
MS.gene55995.t1	AT2G14170	24.027	437	307	9	61	488	17	437	3.12e-24	107
MS.gene55995.t1	AT2G14170	24.027	437	307	9	61	488	126	546	6.21e-24	106
MS.gene55995.t1	AT2G14170	24.027	437	307	9	61	488	126	546	6.51e-24	106
MS.gene55995.t1	AT4G34240	27.562	283	179	6	82	358	76	338	3.93e-18	87.0

Find 126 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTGCTAATGACTCAAAATA+TGG	0.189862	2.3:+56503492	MS.gene55995:CDS
GCCAGCCACCATGAAGTATT+TGG	0.227166	2.3:+56498368	MS.gene55995:CDS
TGGAAATGGAATTGTGATTA+AGG	0.231209	2.3:+56501167	MS.gene55995:CDS
TTGCAGGGCCCACCACTTGC+TGG	0.272887	2.3:+56503064	MS.gene55995:intron
TTCTTCCTTCAATGGCGTTT+TGG	0.273527	2.3:+56496936	None:intergenic
GTCAGGGCTGTTCTTCAGTC+AGG	0.294176	2.3:+56502277	MS.gene55995:CDS
TAGTATCCTGTGGCAGAAAA+TGG	0.307985	2.3:+56504240	MS.gene55995:intron
CAACATGTGAGAAGATAAAT+TGG	0.311009	2.3:+56500606	MS.gene55995:CDS
AGAAAATGGATTTGAATTTC+AGG	0.311412	2.3:+56504254	MS.gene55995:CDS
GGCGTAAAACACAGTGGATT+TGG	0.317784	2.3:+56504030	MS.gene55995:CDS
ACTTGCTGGCAAGTATGATA+TGG	0.319263	2.3:+56503078	MS.gene55995:CDS
GAACATTCTGAAAAGCTTCT+AGG	0.321342	2.3:+56503118	MS.gene55995:CDS
CCACCAAGCTCTAGTGTAAC+TGG	0.324494	2.3:-56502121	None:intergenic
CTCTACAGGTGGCAATAAAA+AGG	0.324927	2.3:+56504365	MS.gene55995:CDS
CTTACCAGGTTTGGTGAAAC+AGG	0.328288	2.3:+56501606	MS.gene55995:intron
CGCTATATGGTCTTAGCATA+TGG	0.333976	2.3:+56504292	MS.gene55995:CDS
TCAGAGCTAAACTTCATTAT+CGG	0.341800	2.3:-56503453	None:intergenic
GACCTTGTTGAGGTGATAAC+AGG	0.357161	2.3:+56501502	MS.gene55995:CDS
TCACTTGTTGAAGCGCTATA+TGG	0.360016	2.3:+56504279	MS.gene55995:CDS
GCATTTGACTTATAGGCATT+TGG	0.361428	2.3:+56503420	MS.gene55995:intron
ATTGTTGCACGTGGAAGTTT+TGG	0.369745	2.3:+56503175	MS.gene55995:CDS
TTTGGGATTTCTTCCTGCTT+TGG	0.373547	2.3:+56498386	MS.gene55995:CDS
TCCTGCTTTGGCGCCGGATG+AGG	0.376504	2.3:+56498398	MS.gene55995:CDS
GGTATCTTTGTCTTAATGAA+TGG	0.385200	2.3:-56504123	None:intergenic
CCAGCCACCATGAAGTATTT+GGG	0.385798	2.3:+56498369	MS.gene55995:CDS
AGGATATCTTCACGTGATAC+TGG	0.386025	2.3:+56500545	MS.gene55995:intron
AAGGGGAACGGCGCAGCAAT+CGG	0.391886	2.3:+56498323	MS.gene55995:CDS
CTATGGCAGCAAGGGCTGAT+TGG	0.398099	2.3:-56501468	None:intergenic
GTAACTTTGCTGACAAAAGA+TGG	0.410535	2.3:-56502352	None:intergenic
TCAGAACATGCAAGTTGGTC+TGG	0.413232	2.3:+56501424	MS.gene55995:CDS
AACGTCGATCGAAGGAACTT+TGG	0.413262	2.3:-56497023	None:intergenic
AGACAGACCTGAATAGGCTT+TGG	0.415353	2.3:-56504144	None:intergenic
AAAGATACCAAAGCCTATTC+AGG	0.419183	2.3:+56504137	MS.gene55995:CDS
ACGTCGATCGAAGGAACTTT+GGG	0.420608	2.3:-56497022	None:intergenic
ATTTCTTCCTGCTTTGGCGC+CGG	0.425705	2.3:+56498392	MS.gene55995:CDS
AAGAAATCCCAAATACTTCA+TGG	0.426395	2.3:-56498376	None:intergenic
GGACGATTCGGTGGTGTTGA+AGG	0.434305	2.3:+56504051	MS.gene55995:CDS
AGTCAGTAGTTGAAGATAGA+TGG	0.436417	2.3:+56504097	MS.gene55995:CDS
CTTGCATCAATTTCATTGAG+TGG	0.441509	2.3:-56503258	None:intergenic
TGCATCGAATTACATGTGTC+AGG	0.444184	2.3:+56503605	MS.gene55995:CDS
CACAGTGGATTTGGACGATT+CGG	0.447805	2.3:+56504039	MS.gene55995:CDS
AACTTCATTATCGGCATGAT+AGG	0.455245	2.3:-56503444	None:intergenic
CTTCAACTACTGACTTTACA+AGG	0.459181	2.3:-56504089	None:intergenic
CCCAAATACTTCATGGTGGC+TGG	0.459911	2.3:-56498369	None:intergenic
AGGTTGCTCAAATTGCTGTC+AGG	0.459934	2.3:+56502260	MS.gene55995:intron
ATCACCTCAACAAGGTCCTC+TGG	0.461400	2.3:-56501496	None:intergenic
AAGGTCCTCTGGAGCTCCTA+TGG	0.461753	2.3:-56501485	None:intergenic
TTGCTAATGACTCAAAATAT+GGG	0.466403	2.3:+56503493	MS.gene55995:CDS
AGGGGAACGGCGCAGCAATC+GGG	0.468490	2.3:+56498324	MS.gene55995:CDS
ATGGGATCGTTTGCAAGCAT+TGG	0.469554	2.3:+56504311	MS.gene55995:CDS
CAAGGGCTGATTGGATGATC+CGG	0.470846	2.3:-56501459	None:intergenic
ATCACCTGGGGTTGGTAAGA+TGG	0.471554	2.3:+56501671	MS.gene55995:CDS
GATTGCTGCGCCGTTCCCCT+TGG	0.471929	2.3:-56498321	None:intergenic
TGCTGCGCCGTTCCCCTTGG+AGG	0.473549	2.3:-56498318	None:intergenic
AGCGAATGCAAGAACGAGAA+TGG	0.478429	2.3:-56496963	None:intergenic
GATAAATTGGCTATTGTCAG+AGG	0.478430	2.3:+56500619	MS.gene55995:CDS
TTAATTGCAGTGTTGGAAGT+TGG	0.483090	2.3:+56497139	MS.gene55995:intron
ACCTCATCCGGCGCCAAAGC+AGG	0.483725	2.3:-56498399	None:intergenic
TCAGGGCTGTTCTTCAGTCA+GGG	0.485988	2.3:+56502278	MS.gene55995:CDS
AAGATGGATAAATGTTCCTA+TGG	0.486775	2.3:-56502336	None:intergenic
CTGGAGCTCCTATGGCAGCA+AGG	0.488303	2.3:-56501477	None:intergenic
TAGCTTCTCATATACATTGT+GGG	0.490188	2.3:+56503562	MS.gene55995:CDS
CTTACTGAGCAGAACTCTAC+AGG	0.491012	2.3:+56504351	MS.gene55995:CDS
TGGAGCTCCTATGGCAGCAA+GGG	0.495946	2.3:-56501476	None:intergenic
ATAGGCTCACAAACCTCATC+CGG	0.501686	2.3:-56498411	None:intergenic
CAATCAGCCCTTGCTGCCAT+AGG	0.506439	2.3:+56501469	MS.gene55995:CDS
TTTGTTGGATCACCTGGGGT+TGG	0.506824	2.3:+56501663	MS.gene55995:CDS
CTTGCTGGCAAGTATGATAT+GGG	0.516793	2.3:+56503079	MS.gene55995:CDS
GCTATATGGTCTTAGCATAT+GGG	0.521718	2.3:+56504293	MS.gene55995:CDS
AGGGCTGTTCTTCAGTCAGG+GGG	0.535804	2.3:+56502280	MS.gene55995:CDS
GAAGTTTAGCTCTGATGAAG+AGG	0.535852	2.3:+56503461	MS.gene55995:CDS
GTAAATGATGCTTTAGACAA+AGG	0.536332	2.3:+56503145	MS.gene55995:CDS
TTTCCAGTCTCTGCCATTTG+GGG	0.540605	2.3:+56504008	MS.gene55995:intron
CAAAGACTAGCTTCAAGCAA+AGG	0.543389	2.3:+56499106	MS.gene55995:CDS
TCATACTTGCCAGCAAGTGG+TGG	0.545019	2.3:-56503073	None:intergenic
GGTTGCTCAAATTGCTGTCA+GGG	0.546154	2.3:+56502261	MS.gene55995:intron
TCACATTCACAATCACAGTA+GGG	0.555942	2.3:-56503234	None:intergenic
TCAGGTGCCTCCAAGGGGAA+CGG	0.558856	2.3:+56498311	MS.gene55995:intron
TATATGAGAAGCTATCTCTC+TGG	0.559110	2.3:-56503553	None:intergenic
TGGTGAAACAGGAGAAGCAC+TGG	0.562872	2.3:+56501617	MS.gene55995:CDS
AATGAAATTGATGCAAGAAG+AGG	0.563532	2.3:+56503264	MS.gene55995:CDS
ATACCAGTTACACTAGAGCT+TGG	0.564045	2.3:+56502118	MS.gene55995:CDS
AGAAGCACTGGTGTCTTCTG+TGG	0.565852	2.3:+56501629	MS.gene55995:CDS
CCAGTTACACTAGAGCTTGG+TGG	0.568636	2.3:+56502121	MS.gene55995:CDS
AATGTTTGAAACCTGAGTAC+AGG	0.570318	2.3:+56500648	MS.gene55995:CDS
ACAATGGTAGATGCTTCTCT+AGG	0.573876	2.3:+56500572	MS.gene55995:CDS
AGCTTCTCATATACATTGTG+GGG	0.574125	2.3:+56503563	MS.gene55995:CDS
CAGGGCTGTTCTTCAGTCAG+GGG	0.574303	2.3:+56502279	MS.gene55995:CDS
GAAGCATCAACGTCGATCGA+AGG	0.577147	2.3:-56497031	None:intergenic
GAACTTTGGGAGGAATGAGA+AGG	0.580699	2.3:-56497009	None:intergenic
TCATCTGTCCTAGTATCCTG+TGG	0.591006	2.3:+56504230	MS.gene55995:intron
TTCCAGTCTCTGCCATTTGG+GGG	0.595438	2.3:+56504009	MS.gene55995:intron
ATCGACGTTGATGCTTCCGA+TGG	0.598509	2.3:+56497037	MS.gene55995:CDS
TTATTGGGGCCATTGTGTCG+TGG	0.599690	2.3:+56501094	MS.gene55995:CDS
GGAAGTTGGAAATCAATCGC+AGG	0.603674	2.3:+56497153	MS.gene55995:CDS
ATAGCTTCTCATATACATTG+TGG	0.604160	2.3:+56503561	MS.gene55995:CDS
TGAGACAGGTACCTGTACTC+AGG	0.604776	2.3:-56500659	None:intergenic
AGATATCAGAACATGCAAGT+TGG	0.612985	2.3:+56501419	MS.gene55995:intron
AATGGCCCCAATAACGCCAA+GGG	0.615997	2.3:-56501085	None:intergenic
TGGGAGGAATGAGAAGGAGA+AGG	0.623716	2.3:-56497003	None:intergenic
CAATGGCCCCAATAACGCCA+AGG	0.623770	2.3:-56501086	None:intergenic
TGCTGCCATAGGAGCTCCAG+AGG	0.624048	2.3:+56501480	MS.gene55995:CDS
ATATCATACTTGCCAGCAAG+TGG	0.624655	2.3:-56503076	None:intergenic
CATACCATCTTACCAACCCC+AGG	0.625175	2.3:-56501675	None:intergenic
AGTGGATTTGGACGATTCGG+TGG	0.625255	2.3:+56504042	MS.gene55995:CDS
AGCTCCAGAGGACCTTGTTG+AGG	0.625959	2.3:+56501492	MS.gene55995:CDS
TGTTTGTGAAGACGTAGATG+TGG	0.627212	2.3:+56502159	MS.gene55995:CDS
TTCACATTCACAATCACAGT+AGG	0.630142	2.3:-56503235	None:intergenic
CACATTCACAATCACAGTAG+GGG	0.639355	2.3:-56503233	None:intergenic
CATACTTGCCAGCAAGTGGT+GGG	0.642513	2.3:-56503072	None:intergenic
GGGCTGTTCTTCAGTCAGGG+GGG	0.644321	2.3:+56502281	MS.gene55995:CDS
GGGATAGTTCCACGACACAA+TGG	0.651870	2.3:-56501103	None:intergenic
GGAGCTGAAATTGTTGCACG+TGG	0.652524	2.3:+56503166	MS.gene55995:CDS
ATGAAGCATTGATCTTCCAG+AGG	0.652577	2.3:-56501037	None:intergenic
GCTTCATAAGAGAGCCAGAG+TGG	0.653340	2.3:+56501053	MS.gene55995:CDS
ACATTCACAATCACAGTAGG+GGG	0.657269	2.3:-56503232	None:intergenic
TTTATTCAGGTGCCTCCAAG+GGG	0.657310	2.3:+56498306	MS.gene55995:intron
ATAAATTGGCTATTGTCAGA+GGG	0.660827	2.3:+56500620	MS.gene55995:CDS
TCGATCGAAGGAACTTTGGG+AGG	0.662771	2.3:-56497019	None:intergenic
ACCTTGTTGAGGTGATAACA+GGG	0.667865	2.3:+56501503	MS.gene55995:CDS
CAGTAGTTGAAGATAGATGG+TGG	0.670419	2.3:+56504100	MS.gene55995:CDS
ATGGCCCCAATAACGCCAAG+GGG	0.691262	2.3:-56501084	None:intergenic
ACTGAGCAGAACTCTACAGG+TGG	0.704579	2.3:+56504354	MS.gene55995:CDS
ACCCTGTTATCACCTCAACA+AGG	0.707587	2.3:-56501504	None:intergenic
AAATCCCAAATACTTCATGG+TGG	0.723996	2.3:-56498373	None:intergenic
TGGCCCCAATAACGCCAAGG+GGG	0.740602	2.3:-56501083	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr2.3	gene	56496947	56504395	56496947	ID=MS.gene55995
chr2.3	mRNA	56496947	56504395	56496947	ID=MS.gene55995.t1;Parent=MS.gene55995
chr2.3	exon	56496947	56497058	56496947	ID=MS.gene55995.t1.exon1;Parent=MS.gene55995.t1
chr2.3	CDS	56496947	56497058	56496947	ID=cds.MS.gene55995.t1;Parent=MS.gene55995.t1
chr2.3	exon	56497149	56497192	56497149	ID=MS.gene55995.t1.exon2;Parent=MS.gene55995.t1
chr2.3	CDS	56497149	56497192	56497149	ID=cds.MS.gene55995.t1;Parent=MS.gene55995.t1
chr2.3	exon	56498315	56498419	56498315	ID=MS.gene55995.t1.exon3;Parent=MS.gene55995.t1
chr2.3	CDS	56498315	56498419	56498315	ID=cds.MS.gene55995.t1;Parent=MS.gene55995.t1
chr2.3	exon	56499060	56499187	56499060	ID=MS.gene55995.t1.exon4;Parent=MS.gene55995.t1
chr2.3	CDS	56499060	56499187	56499060	ID=cds.MS.gene55995.t1;Parent=MS.gene55995.t1
chr2.3	exon	56500547	56500669	56500547	ID=MS.gene55995.t1.exon5;Parent=MS.gene55995.t1
chr2.3	CDS	56500547	56500669	56500547	ID=cds.MS.gene55995.t1;Parent=MS.gene55995.t1
chr2.3	exon	56501035	56501188	56501035	ID=MS.gene55995.t1.exon6;Parent=MS.gene55995.t1
chr2.3	CDS	56501035	56501188	56501035	ID=cds.MS.gene55995.t1;Parent=MS.gene55995.t1
chr2.3	exon	56501421	56501524	56501421	ID=MS.gene55995.t1.exon7;Parent=MS.gene55995.t1
chr2.3	CDS	56501421	56501524	56501421	ID=cds.MS.gene55995.t1;Parent=MS.gene55995.t1
chr2.3	exon	56501614	56501692	56501614	ID=MS.gene55995.t1.exon8;Parent=MS.gene55995.t1
chr2.3	CDS	56501614	56501692	56501614	ID=cds.MS.gene55995.t1;Parent=MS.gene55995.t1
chr2.3	exon	56502091	56502186	56502091	ID=MS.gene55995.t1.exon9;Parent=MS.gene55995.t1
chr2.3	CDS	56502091	56502186	56502091	ID=cds.MS.gene55995.t1;Parent=MS.gene55995.t1
chr2.3	exon	56502262	56502399	56502262	ID=MS.gene55995.t1.exon10;Parent=MS.gene55995.t1
chr2.3	CDS	56502262	56502399	56502262	ID=cds.MS.gene55995.t1;Parent=MS.gene55995.t1
chr2.3	exon	56503070	56503285	56503070	ID=MS.gene55995.t1.exon11;Parent=MS.gene55995.t1
chr2.3	CDS	56503070	56503285	56503070	ID=cds.MS.gene55995.t1;Parent=MS.gene55995.t1
chr2.3	exon	56503435	56503626	56503435	ID=MS.gene55995.t1.exon12;Parent=MS.gene55995.t1
chr2.3	CDS	56503435	56503626	56503435	ID=cds.MS.gene55995.t1;Parent=MS.gene55995.t1
chr2.3	exon	56504015	56504158	56504015	ID=MS.gene55995.t1.exon13;Parent=MS.gene55995.t1
chr2.3	CDS	56504015	56504158	56504015	ID=cds.MS.gene55995.t1;Parent=MS.gene55995.t1
chr2.3	exon	56504243	56504395	56504243	ID=MS.gene55995.t1.exon14;Parent=MS.gene55995.t1
chr2.3	CDS	56504243	56504395	56504243	ID=cds.MS.gene55995.t1;Parent=MS.gene55995.t1

Gene Sequence

>MS.gene55995

ATGGCGTTTTGGTGGTCCATTCTCGTTCTTGCATTCGCTTTCGCTATCTGCAAGTTCCTTCTCCTTCTCATTCCTCCCAAAGTTCCTTCGATCGACGTTGATGCTTCCGATGGTAATCTTCTTCGTTCATTCTTTTGCGTGTGAATTTGTTGTGAACTGTGAAAATGTAACGTTGATTTTGTTTTTGTTTGATTAATTGCAGTGTTGGAAGTTGGAAATCAATCGCAGGAGAATAATTTCATATATGTGAGTAGTGATTTGATGCTTTTATTTATTTATTTTGTTCATACATTTCTTTGATGCTTGGATAATTGAGATCTTGATGATGTGTTTAGTTTAATTTTGTTAGATCGATTTGGTTTTACTTTTGGATTTGAAATTTGAAATTAGAGTTCACTTTGATTGTAAATTGTGGTGACGAATTGATTTAATTTTATCTTGTGAAGCAACTGACACCATACATGACACGACACAGACACGAAACTGTCACTTGACACCCTTAAAAAAATTGAAAAAAATAAAGAATTTAATTAGTATACATGGTTAATGTACAATTATTTTACACATTCAATGATGTAAAATTGAAAAAAATTCTCAAGAACTTAGTTAGTAAACACCGTAAGTGTACAATTATTTTACACATGCATTCAATGATGTGCTGCCACTTCAATTAATAAATATTCATCATTGGATGCATGTGTAAAATAACTCTACCTGGTCGGTGCATAGTAATTAAACTCTTTATTAAATGTAATCGCATGTGTCAGTGTCTCACACTAACATGTCTGAGACACCGAACACGTCTTCTATCAGAAGTGACAGTGCTACAACTTATGGACTGTTTGGATTTGAGTTTATCTAGTGACAATGGCTTAGACACTTGTGAAACTACTGTTTGGATTGGCTTATTTTTTAGCTTATGCAAAACAGATTATGCAAATAAATAAGCTTTTATGTATTATTCATAAGCTTGTCAAGGTAGTTTATGAAAAAATAGCTTATGAAGATACAATTTTCGTTAACAAGAACTTATGAATTAACATAAAAGGTTATTTATTTGTATAAGCTATTTTTCATAAGCTCAAAAATAAGCCAATCCAAACGGACCGTTAGAGTTTATGGAAGCAGCTTATGACATGTCCATAAGTTGTTTGTAGCTTATTTTTGTAAGCTCTCCATAATAGCTTATGAAAACAACTTATAGCTAGCTTATATGAAAACAATTTGAATTATGCTATCTTTTATTATAGAAATAGCTTATACAAAGCGCATAGTTAAGCTGTTTATCCAAACAGGGCCTTAGCGTTAGTGGTTTGTAATTTTTTCCCCTTTTTGGAGAATCCAGTTGATCGATTGCTTTTTATTCAGGTGCCTCCAAGGGGAACGGCGCAGCAATCGGGCAAGAAAGTTCAGTGCTATGAGCCAGCCACCATGAAGTATTTGGGATTTCTTCCTGCTTTGGCGCCGGATGAGGTTTGTGAGCCTATGCTTATTGCTTCTCAAGAGACTTATGATTGTGATGCATAATTTAACTAACTGAAAAGCAAGCGGCCATGAAATATTTGGAATATGATGCATAGTATAGCTAAGATAGCAAGGAACTAGTAGTTTTAGATGCACAATGCCTATTTGAATGGAGTATTTTTTTTAATTGATAGTGTCAAAAGTTTACATAGTCTTCTAATCATAACTCACCAGGATGCCTCTGTTATATTACTTCTAAAATTATCCCATCAGATATCTACCCGGTGAGATATATGATAGGATGATTGTGTAAATTTTTTGATACCCTCTTAGCGCATAGTCATTAAACTCCTTTTTTATTTATTTAATGTTTATGTAAGTATTATATTTAGAAATAAGAAACCTCAAAATTTATACAGAGACAAAAAAATATCAAAGGGAATAAAACTAGTTGGGCTGAGTAGCTCGTGAGTTTGTTTGGTTCACTTGTATTTCTTATGAGTTATGCCAGCACTCAAGAAGCCATAAATATGAATAAGAACAAAGTTATTGCAAGAGTGTTCATAAAATATTATACCAGTTTGACTAATTTCATTCATGGGTTAATGTATTGCCATAGTTAACTTGTACTAATTTGATATATGGATAGGTCAAGGAGCGAATTGAAAAAGTACGGAAGGCACAAAAAATGTGGGCAAAGACTAGCTTCAAGCAAAGGCGCCAGTTTTTACGTATACTACTGAAGTATATAATTAAACATCAAGCACTTATTTGCGAGTAAGACCACTTCAATTCCATGGTCATAGTTTGAAGATCAGGTGTTAGTTTTATTTTTAGGCTTAATTTCACTTTTGGCCCCCCAAGTTTCACAATTGTGCAATTTTGCCGCCCCTCAAGTTTAAAATGAGTGATTTTGACTCCTTAAGTTTGCCTCCTTTTGCACTTACTAGTCCCCATGCACATTTTGACCAAAAAATGATGATGTGGCTAATTTCAATGACATGGCATATCTCTGTGTTCGCCAATGTGGAAATTAACATTTTTTTTAAAAAAAAGTTTAAAAAAAGAGGAAATCAGTTTTATTTTAATTTTATTTCTTCTGAATTTTAATTAATTGTTTTCACACTCCCTCTTTATTTTAGTTTTACCAATAATTTTCCTTCTTAATTTTCACTCTAGTTTCAGTTTCCCCCTTCCCTTCTTTCAAGTTTGGAGCCAATAACCATAAAGTCTCAACTTAATCGTCTATACATACCGCAGAAAATGTGTGAACCAAACTAATACTCAATCATACTAGTCAAAAAACTCAAATTATCCACAAAAATGCAGCGTTGATAAAAACACGCATGTATCCCCCGTGAGCTTAGCTCAGTTGGTAGGGATAATGCATAATATATGCAAGGTCTGGGGTTCGAATCCCAGACACCACCAAAAAAAGATAAAACACGCATGCAACATGTATATCTAAGTGTTTGATTCTACTGTTTAACACAATTGTATCATATCCTACTTATAACATATTTCAATATATCACAATGTACTAGTGGATAAGCAATTAGATATATTAGCAGATAGGAGGCTTGGTTGGAGGTGGGACTGGGGGTGCTATCTATGGAAGAAATGGGGTGCTCTGTAGAGTAGTTCATATGTGAAAAAATTAATTAAAATTGAGCAGAAATATATATAAAAAAAAAAAAAAAAGTATCATTAAGAGTTCAATCTGAAAAAGAAAAAAAAAAAAAACTGATTTCTTTCTTTTTTTTTAAATGTTAATTTCAACATTGGCGAACACATGGAAATGCCACGTCATGACAATTAGCCACGTTATTATTTTTTGGTCAAAATATGCATGGGGGACTAGTAAGGGTAAAAGGGGCTAAAATCACTCATTTTAAACTTGGGGGACCAAAATCGCACAATTGTGAAACTTTAGGGGCCAAAATGCAATTAAGCCTTATTTTTATTTTTATTTTTAAAGAGAACTTATTTAATGTTGCATTTGTGAGTTGTGACATCCTGGCGAACATGCAGTTTTTAGCATAGTTTTAATTGTTAGTCTGAAAAATGGATTTGAACTGGGCTTGTTGCATAAGAATATCAATATGAGATAAATTCTAACTTGTGTCCTTTTATTAGGATATCTTCACGTGATACTGGAAAAACAATGGTAGATGCTTCTCTAGGAGAAATAATGACAACATGTGAGAAGATAAATTGGCTATTGTCAGAGGGTGAAAAATGTTTGAAACCTGAGTACAGGTACCTGTCTCAATCTTTTTTGTGTTTTACTAATAATTTTATCATCTTACTTTAGATTGAAAACACTAGTAGTTCTCTGCATGTCTTTATTTATTCAAAAGAAAACAATACCCCCTCCCACAATCCCAGTAATTGACTCTTTTCTCTGCTTAAATTGACTCTTTTCTATGCTTAAATTGACTTATGTTAAATTGTCTATCATTTTATTTTCTTTGTTCTTTACTGTATGCTTTCTTTTGCTTCCTACAGTTTTTTTTTTCTTTCTTTTTTCATGTAAATAAAGAATGTTTCTGTGTTAATATCGCAAATTAGCTAATTCACTTTCATGACCACCTTTTGTTTCGCAATACATTAAAAACATGCAGATCCTCTGGAAGATCAATGCTTCATAAGAGAGCCAGAGTGGAATTTCACCCCCTTGGCGTTATTGGGGCCATTGTGTCGTGGAACTATCCCTTCCATAATATTTTTAACCCTATGCTAGCAGCAGTTTTTTCTGGAAATGGAATTGTGATTAAGGTATAAAATGACTTAATATGTACTGTGTATATCTTCTCTAAAATTGTTCATCATATGGATGGATTACCATGTTTTTATGAAAGTAGATATTGTTAACTGTCAGGCAGCCTGACAGTTAACAATGTTCCATTAACACTTGATACTAAAAATTGAGACTCTGCAACATGCAACACCTACTCCTCTGTGTTTATATTTTTCAGTTTGACAGAAATCCTTGTGATTCTGATTGTAGATATCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATCATCCAATCAGCCCTTGCTGCCATAGGAGCTCCAGAGGACCTTGTTGAGGTGATAACAGGGTAGAGCCTTATTTTGCACCCTCCCTTTTTTTCCTTTAATTTCAAAGTCATGTCTGCAAGTATAATCTCAATTGGACCTTTCTTACCAGGTTTGGTGAAACAGGAGAAGCACTGGTGTCTTCTGTGGATAAAGTCATTTTTGTTGGATCACCTGGGGTTGGTAAGATGGTATGGTTCCTTAAGCCAATCAAATTGGTTCATCCTGTCCTGTCTTCTGTGAATTGCATCACATAGTAGTTTTATTTATGATTCTTAAAATATAGTTTATGATATGTTGTGCATCATATATGTTTAGTAAAGAATTTTCCTAGAATACTTGGTCAATGTTTAGAGTAGCATTTGGAGCAGCTGAATCCCCATTTTGTACTCACAAGAAAAGAGTAACATCAAAAGTTGTAGTATACCTCTAGTCTAAACAGCGACGCCCGTTAAGCAAAATCAGTGAGTGAGATAGTTTGGGGCTTTTTGTCTACTTTTCCGTATATGCTTCTTCTATTCTTTCCGAGATGTTCCATGCAATGAGTAGTCTTTTGCACGTTGATAATATCATTTGTTCTTTTATGCAGATAATGAAAAATGCTTCTGAGACACTTATACCAGTTACACTAGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGACGTAGATGTGGACCATGTATGAATACCTTCCCCATTATGCATTCGTTGTTGAATTCCATAGTTTTAACACCCACTAATCTGCTGAATGTAGGTTGCTCAAATTGCTGTCAGGGCTGTTCTTCAGTCAGGGGGGCAGAACTGTGCTGGTGCTGAACGATTTTATGTCCATAGGAACATTTATCCATCTTTTGTCAGCAAAGTTACCAAAATCATAAAATCTGTTACAGCTGTAAGTGTTTATGCAAGTGTTTTTCCATGACCTTTCATTTGTAACATCTGTCTTGTGCAATTTCTTTCCAAGTCAACATGGGCTTCTTGTCACATTTGCCTGCACTTGATTCTTACAGAATTGCTATATCACATGTCCACCAGCTTAACTTTACATTGGTTCTAGTTTATTATGAAATTTTGCAAGACGGTTGTATGATTCATGATATGTTGTTTTTCCTCTATTTTTGTTGCATTTCTGCATGTCTCGTTTTCTATTTTCCTTAGAGGGAAGAGAAAGAAATAAAGAGTCTGAGTTATGATGATGATTTTAATTTTATACAATTTACTAAACACGACCCTTATTTATATTTATACTGAACTTCTAATCCTAATTAAATAAGGAAAAATATCATGATATGGCAAATTGTGAAATGATTGTTATTCTTCAAATAACTAATGCTGAGAAGTTGGGATCTATGATTAGATAATAGATATACTGATGAGAGGAAGGGACAAAAATGTCATGAAGTTGTATAAATCCCACAGATTATATTAACATTGAAAACTGAGGACTTCTGTATGAGCAAGAACTATATTTTCACTTATTAATGGAGCATAGGGGTCTTCCGCAAAATATTTAGTATTAAGAAGTCCGTTCTTTAAAGCTTTTGGTTAATGATTTCTTGCAGGGCCCACCACTTGCTGGCAAGTATGATATGGGAGCTTTATGCATGCATGAACATTCTGAAAAGCTTCTAGGTCTTGTAAATGATGCTTTAGACAAAGGAGCTGAAATTGTTGCACGTGGAAGTTTTGGACATATAGGCGAAGATGCTGTTGATCAGTATTTTCCCCCTACTGTGATTGTGAATGTGAACCACTCAATGAAATTGATGCAAGAAGAGGTAGCAAACCTTTACTACAAGCATTGGATATTTTGAAATTTGAAAAACTGATTCTCATGTAGTGCAACCAACTATTATTTGAAAATGTCTTCCTATCTTGTATGCTCCAACAACTGCTTACTAGATTCATCTGTGCATTTGACTTATAGGCATTTGGACCTATCATGCCGATAATGAAGTTTAGCTCTGATGAAGAGGTTATCAAGCTTGCTAATGACTCAAAATATGGGCTCAGCTGTGCTGTTTTCTCAGGCAGTCAAAGTCATGCCAGAGAGATAGCTTCTCATATACATTGTGGGGTTGCTGCAGTTAATGATTTTGCATCGAATTACATGTGTCAGGTAAAATTTGATTTTAAATAGTTTATCTCTCGCTCCATGTTTGCGTGTCACCTGAAAGGGACCTAGTAGTAGCGTGATATGATGTGTGCTTTGTTGATATCATCCATTGCTAAAGAACAAGAGAAACAACTAAAATATTAGGAGCATGGTTGTGAAATTCAGACTAGACTGGCCAATCTAACGTTTTGTTCACATTCCTATAGAACTAGCTTGAACCGGATAGAATCATGGTTCAAATGCAATTGGTTCAGTCGGTCATTATTATTTTTTTTTAATTAACAAAATTTTGTACATTTTGTTTTAGTACTATCGGTATATGTTCCTAATTCAACCTGCGTGTACCTTTTTAAATTTCCATTGAAGCAAAGTTGCATTCTGATTTTTCCAGTCTCTGCCATTTGGGGGCGTAAAACACAGTGGATTTGGACGATTCGGTGGTGTTGAAGGCTTGCGAGCATGCTGCCTTGTAAAGTCAGTAGTTGAAGATAGATGGTGGCCATTCATTAAGACAAAGATACCAAAGCCTATTCAGGTCTGTCTAAAAAACCTTTCATTATATCATACAAACTACACTGTTAGTGGATAGATACTGAGATGCACTTTTCATCTGTCCTAGTATCCTGTGGCAGAAAATGGATTTGAATTTCAGGAGTCACTTGTTGAAGCGCTATATGGTCTTAGCATATGGGATCGTTTGCAAGCATTGGTAAACGTTTTGAAAATGCTTACTGAGCAGAACTCTACAGGTGGCAATAAAAAGGAGAAATGA

Protein sequence

>MS.gene55995.t1

MAFWWSILVLAFAFAICKFLLLLIPPKVPSIDVDASDVLEVGNQSQENNFIYVPPRGTAQQSGKKVQCYEPATMKYLGFLPALAPDEVKERIEKVRKAQKMWAKTSFKQRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEKCLKPEYRSSGRSMLHKRARVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFGETGEALVSSVDKVIFVGSPGVGKMIMKNASETLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSGGQNCAGAERFYVHRNIYPSFVSKVTKIIKSVTAGPPLAGKYDMGALCMHEHSEKLLGLVNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHSMKLMQEEAFGPIMPIMKFSSDEEVIKLANDSKYGLSCAVFSGSQSHAREIASHIHCGVAAVNDFASNYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKSVVEDRWWPFIKTKIPKPIQYPVAENGFEFQESLVEALYGLSIWDRLQALVNVLKMLTEQNSTGGNKKEK