Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018718.t1 | XP_013449881.1 | 97.4 | 379 | 10 | 0 | 1 | 379 | 4 | 382 | 2.60E-215 | 757.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018718.t1 | Q9C6X9 | 30.1 | 352 | 198 | 9 | 12 | 356 | 7 | 317 | 1.9e-28 | 128.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018718.t1 | A0A072U2J1 | 97.4 | 379 | 10 | 0 | 1 | 379 | 4 | 382 | 1.9e-215 | 757.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene037197 | MS.gene018718 | PPI |
| MS.gene30094 | MS.gene018718 | PPI |
| MS.gene018718 | MS.gene017581 | PPI |
| MS.gene91760 | MS.gene018718 | PPI |
| MS.gene064059 | MS.gene018718 | PPI |
| MS.gene023531 | MS.gene018718 | PPI |
| MS.gene28903 | MS.gene018718 | PPI |
| MS.gene23497 | MS.gene018718 | PPI |
| MS.gene39445 | MS.gene018718 | PPI |
| MS.gene28904 | MS.gene018718 | PPI |
| MS.gene017581 | MS.gene018718 | PPI |
| MS.gene44191 | MS.gene018718 | PPI |
| MS.gene025209 | MS.gene018718 | PPI |
| MS.gene44190 | MS.gene018718 | PPI |
| MS.gene049886 | MS.gene018718 | PPI |
| MS.gene23495 | MS.gene018718 | PPI |
| MS.gene97013 | MS.gene018718 | PPI |
| MS.gene012160 | MS.gene018718 | PPI |
| MS.gene66307 | MS.gene018718 | PPI |
| MS.gene018718 | MS.gene08770 | PPI |
| MS.gene012159 | MS.gene018718 | PPI |
| MS.gene08770 | MS.gene018718 | PPI |
| MS.gene64423 | MS.gene018718 | PPI |
| MS.gene017582 | MS.gene018718 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018718.t1 | MTR_7g096720 | 97.361 | 379 | 10 | 0 | 1 | 379 | 4 | 382 | 0.0 | 768 |
| MS.gene018718.t1 | MTR_4g088925 | 66.022 | 362 | 109 | 3 | 18 | 379 | 34 | 381 | 4.09e-156 | 444 |
| MS.gene018718.t1 | MTR_8g085760 | 52.196 | 387 | 161 | 9 | 4 | 378 | 9 | 383 | 4.43e-125 | 365 |
| MS.gene018718.t1 | MTR_6g092570 | 43.548 | 372 | 167 | 15 | 13 | 375 | 11 | 348 | 3.21e-69 | 222 |
| MS.gene018718.t1 | MTR_5g079830 | 41.193 | 352 | 177 | 10 | 13 | 360 | 9 | 334 | 5.08e-63 | 207 |
| MS.gene018718.t1 | MTR_8g074610 | 36.554 | 383 | 182 | 17 | 3 | 356 | 20 | 370 | 4.77e-50 | 173 |
| MS.gene018718.t1 | MTR_2g041510 | 35.772 | 369 | 182 | 12 | 12 | 356 | 8 | 345 | 3.60e-46 | 162 |
| MS.gene018718.t1 | MTR_2g041510 | 35.772 | 369 | 182 | 12 | 12 | 356 | 28 | 365 | 4.36e-46 | 162 |
| MS.gene018718.t1 | MTR_8g074640 | 32.440 | 373 | 194 | 11 | 12 | 356 | 8 | 350 | 1.41e-45 | 160 |
| MS.gene018718.t1 | MTR_4g125090 | 38.339 | 313 | 139 | 12 | 13 | 322 | 48 | 309 | 2.97e-44 | 155 |
| MS.gene018718.t1 | MTR_7g096760 | 69.474 | 95 | 27 | 2 | 225 | 318 | 1 | 94 | 2.09e-35 | 127 |
| MS.gene018718.t1 | MTR_3g029650 | 25.858 | 379 | 215 | 11 | 12 | 375 | 7 | 334 | 2.98e-17 | 84.0 |
| MS.gene018718.t1 | MTR_3g029650 | 21.429 | 378 | 234 | 12 | 4 | 349 | 366 | 712 | 2.85e-12 | 68.6 |
| MS.gene018718.t1 | MTR_3g029800 | 23.513 | 353 | 208 | 12 | 12 | 345 | 6 | 315 | 1.71e-14 | 74.3 |
| MS.gene018718.t1 | MTR_6g018400 | 23.056 | 360 | 203 | 13 | 12 | 343 | 7 | 320 | 3.74e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018718.t1 | AT2G26160 | 29.714 | 350 | 216 | 11 | 12 | 357 | 7 | 330 | 4.24e-34 | 129 |
| MS.gene018718.t1 | AT1G65770 | 28.571 | 371 | 196 | 11 | 12 | 356 | 5 | 332 | 6.26e-34 | 129 |
| MS.gene018718.t1 | AT1G44080 | 29.830 | 352 | 199 | 9 | 12 | 356 | 7 | 317 | 1.53e-31 | 122 |
| MS.gene018718.t1 | AT4G35733 | 27.606 | 355 | 218 | 8 | 12 | 356 | 8 | 333 | 3.29e-28 | 114 |
| MS.gene018718.t1 | AT3G25750 | 27.095 | 358 | 202 | 12 | 12 | 357 | 7 | 317 | 1.73e-23 | 100 |
| MS.gene018718.t1 | AT3G25750 | 26.722 | 363 | 211 | 13 | 12 | 357 | 7 | 331 | 8.92e-23 | 98.6 |
| MS.gene018718.t1 | AT2G17030 | 24.590 | 366 | 216 | 11 | 12 | 345 | 5 | 342 | 4.36e-21 | 94.4 |
| MS.gene018718.t1 | AT1G65740 | 24.731 | 372 | 221 | 11 | 12 | 356 | 5 | 344 | 1.30e-20 | 92.4 |
| MS.gene018718.t1 | AT1G65760 | 26.146 | 371 | 195 | 12 | 6 | 345 | 1 | 323 | 2.10e-20 | 92.0 |
| MS.gene018718.t1 | AT2G17036 | 24.047 | 341 | 221 | 12 | 12 | 334 | 4 | 324 | 1.43e-14 | 75.1 |
| MS.gene018718.t1 | AT2G17036 | 24.047 | 341 | 221 | 12 | 12 | 334 | 5 | 325 | 1.43e-14 | 75.1 |
| MS.gene018718.t1 | AT5G60060 | 26.136 | 352 | 207 | 17 | 1 | 330 | 1 | 321 | 4.95e-12 | 67.0 |
Find 62 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAACCTGCTGACAAATTT+TGG | 0.080030 | 7.1:+11037866 | MS.gene018718:CDS |
| ACTTTATGTTGTGGATAAAA+TGG | 0.170692 | 7.1:+11037438 | MS.gene018718:CDS |
| GAGTTGACTGTTTCCAATAT+TGG | 0.239268 | 7.1:+11037337 | MS.gene018718:CDS |
| GTGCTGAAAATAGGCATATA+AGG | 0.260640 | 7.1:+11037530 | MS.gene018718:CDS |
| TCCGTAGTGTTTGTAGATTT+TGG | 0.264838 | 7.1:+11036888 | MS.gene018718:CDS |
| AGTCATCATGAAGATAAAAT+TGG | 0.275568 | 7.1:+11037205 | MS.gene018718:CDS |
| TGTACCATTGTGCTGAAAAT+AGG | 0.283196 | 7.1:+11037521 | MS.gene018718:CDS |
| GAGATCAAAGAGATAAAGTT+TGG | 0.285701 | 7.1:-11037086 | None:intergenic |
| TGGTTCAATGCGGTATATTT+TGG | 0.305635 | 7.1:-11036984 | None:intergenic |
| GGGTGAGGTTTCGTTTGTTT+TGG | 0.311852 | 7.1:+11037729 | MS.gene018718:CDS |
| AAAGGAAAATATCATGTTAA+AGG | 0.318603 | 7.1:+11037363 | MS.gene018718:CDS |
| TTGATCAAGAATGGGGTAAA+TGG | 0.326226 | 7.1:+11037689 | MS.gene018718:CDS |
| ATGGTTAGAAGTAAAAGATT+TGG | 0.332561 | 7.1:+11037708 | MS.gene018718:CDS |
| CAAATCTTCTTGAAGATTTG+TGG | 0.347804 | 7.1:+11036819 | MS.gene018718:CDS |
| TGGTTAGAAGTAAAAGATTT+GGG | 0.374795 | 7.1:+11037709 | MS.gene018718:CDS |
| CAATGCTCTTTCCTTGAAGT+TGG | 0.381115 | 7.1:+11037477 | MS.gene018718:CDS |
| CAAAAGGGGTTACTTCTTGA+AGG | 0.384442 | 7.1:+11037642 | MS.gene018718:CDS |
| TTGTGAGAGGCAGGTGGAGG+AGG | 0.384893 | 7.1:-11036923 | None:intergenic |
| AAATCTTCTTGAAGATTTGT+GGG | 0.389413 | 7.1:+11036820 | MS.gene018718:CDS |
| TTTATAAGCTTGATCAAGAA+TGG | 0.392244 | 7.1:+11037680 | MS.gene018718:CDS |
| CTTTATGTTGTGGATAAAAT+GGG | 0.396836 | 7.1:+11037439 | MS.gene018718:CDS |
| TCAACTTCTTGTTCTAATCA+AGG | 0.402165 | 7.1:+11037028 | MS.gene018718:CDS |
| ATGATGAAAGGTATTACAAA+AGG | 0.404208 | 7.1:+11037626 | MS.gene018718:CDS |
| CCAATCCAAAATTTGTCAGC+AGG | 0.420447 | 7.1:-11037871 | None:intergenic |
| TGATGAAAGGTATTACAAAA+GGG | 0.432135 | 7.1:+11037627 | MS.gene018718:CDS |
| TGAAAATTGAACCAACTTCA+AGG | 0.432491 | 7.1:-11037488 | None:intergenic |
| TTGTTGGCTCGAGATTACTA+TGG | 0.437431 | 7.1:+11037772 | MS.gene018718:CDS |
| TGTTTCCAATATTGGAGAAA+AGG | 0.445230 | 7.1:+11037345 | MS.gene018718:CDS |
| TTATAAGCTTGATCAAGAAT+GGG | 0.450966 | 7.1:+11037681 | MS.gene018718:CDS |
| TGATGATATAATACATTACA+AGG | 0.467606 | 7.1:+11037411 | MS.gene018718:CDS |
| TCTACTTCTATTATGAAAGC+AGG | 0.486961 | 7.1:+11037812 | MS.gene018718:CDS |
| TGCTGAAAATAGGCATATAA+GGG | 0.494278 | 7.1:+11037531 | MS.gene018718:CDS |
| CTTACAAATTAATTGATCAC+TGG | 0.508472 | 7.1:-11037910 | None:intergenic |
| ATCACTGGATGGAACAAAGT+TGG | 0.510777 | 7.1:-11037895 | None:intergenic |
| TGATTAGAACAAGAAGTTGA+AGG | 0.514698 | 7.1:-11037025 | None:intergenic |
| ATCAAAGAGATAAAGTTTGG+AGG | 0.516104 | 7.1:-11037083 | None:intergenic |
| GATTAGAACAAGAAGTTGAA+GGG | 0.519595 | 7.1:-11037024 | None:intergenic |
| ATTTATATATTAATGATGAA+AGG | 0.523166 | 7.1:+11037614 | MS.gene018718:CDS |
| CAAGGGACAACTTTATGTTG+TGG | 0.530035 | 7.1:+11037429 | MS.gene018718:CDS |
| ATGCAAAGGTTGTGAGAGGC+AGG | 0.537372 | 7.1:-11036932 | None:intergenic |
| AAGCAATTAGTAGAGTATGA+TGG | 0.538440 | 7.1:+11037574 | MS.gene018718:CDS |
| CAAATTAATTGATCACTGGA+TGG | 0.540924 | 7.1:-11037906 | None:intergenic |
| TGTTGGCTCGAGATTACTAT+GGG | 0.552161 | 7.1:+11037773 | MS.gene018718:CDS |
| AGGTTGTGAGAGGCAGGTGG+AGG | 0.559115 | 7.1:-11036926 | None:intergenic |
| CTTCTTGTTCTAATCAAGGT+GGG | 0.559628 | 7.1:+11037032 | MS.gene018718:CDS |
| GATGAAAGGTATTACAAAAG+GGG | 0.559891 | 7.1:+11037628 | MS.gene018718:CDS |
| AGAAGTAAAAGATTTGGGTG+AGG | 0.564111 | 7.1:+11037714 | MS.gene018718:CDS |
| GGGTTGTGATCATGTGGTGA+TGG | 0.571859 | 7.1:-11037004 | None:intergenic |
| GATGGATATGAATAAGATAG+TGG | 0.582410 | 7.1:+11036784 | None:intergenic |
| GCCAAAATCTACAAACACTA+CGG | 0.595515 | 7.1:-11036889 | None:intergenic |
| CTACTTCTATTATGAAAGCA+GGG | 0.600724 | 7.1:+11037813 | MS.gene018718:CDS |
| ACTTCTTGTTCTAATCAAGG+TGG | 0.607280 | 7.1:+11037031 | MS.gene018718:CDS |
| ATCATGTTAAAGGATGATTG+TGG | 0.624512 | 7.1:+11037373 | MS.gene018718:CDS |
| TATAAGCTTGATCAAGAATG+GGG | 0.627945 | 7.1:+11037682 | MS.gene018718:CDS |
| CAAAGGTTGTGAGAGGCAGG+TGG | 0.633368 | 7.1:-11036929 | None:intergenic |
| GATGATATAATACATTACAA+GGG | 0.643392 | 7.1:+11037412 | MS.gene018718:CDS |
| TAATACGAGAATCCGAGCCG+AGG | 0.671509 | 7.1:+11037114 | MS.gene018718:CDS |
| GTTGAAGGGTTGTGATCATG+TGG | 0.682135 | 7.1:-11037010 | None:intergenic |
| TGGAATGCAAAGGTTGTGAG+AGG | 0.687706 | 7.1:-11036936 | None:intergenic |
| GTATGATGGAGGTCTATATG+TGG | 0.691113 | 7.1:+11037588 | MS.gene018718:CDS |
| CAATTAGTAGAGTATGATGG+AGG | 0.693642 | 7.1:+11037577 | MS.gene018718:CDS |
| CATGTGGTGATGGTTCAATG+CGG | 0.842243 | 7.1:-11036994 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATATATTAATGATGAA+AGG | + | chr7.1:11037614-11037633 | MS.gene018718:CDS | 10.0% |
| !! | AAAGGAAAATATCATGTTAA+AGG | + | chr7.1:11037363-11037382 | MS.gene018718:CDS | 20.0% |
| !! | GATGATATAATACATTACAA+GGG | + | chr7.1:11037412-11037431 | MS.gene018718:CDS | 20.0% |
| !! | TGATGATATAATACATTACA+AGG | + | chr7.1:11037411-11037430 | MS.gene018718:CDS | 20.0% |
| !!! | AGTAATCTTGTTTTTTATTG+AGG | + | chr7.1:11037279-11037298 | MS.gene018718:CDS | 20.0% |
| !!! | AGTAGAAAATAATTTTGATG+TGG | - | chr7.1:11036959-11036978 | None:intergenic | 20.0% |
| !!! | GTAATCTTGTTTTTTATTGA+GGG | + | chr7.1:11037280-11037299 | MS.gene018718:CDS | 20.0% |
| ! | AAATCTTCTTGAAGATTTGT+GGG | + | chr7.1:11036820-11036839 | MS.gene018718:CDS | 25.0% |
| ! | ACTTTATGTTGTGGATAAAA+TGG | + | chr7.1:11037438-11037457 | MS.gene018718:CDS | 25.0% |
| ! | AGTCATCATGAAGATAAAAT+TGG | + | chr7.1:11037205-11037224 | MS.gene018718:CDS | 25.0% |
| ! | ATGGTTAGAAGTAAAAGATT+TGG | + | chr7.1:11037708-11037727 | MS.gene018718:CDS | 25.0% |
| ! | CTTTATGTTGTGGATAAAAT+GGG | + | chr7.1:11037439-11037458 | MS.gene018718:CDS | 25.0% |
| ! | TGGTTAGAAGTAAAAGATTT+GGG | + | chr7.1:11037709-11037728 | MS.gene018718:CDS | 25.0% |
| ! | TTATAAGCTTGATCAAGAAT+GGG | + | chr7.1:11037681-11037700 | MS.gene018718:CDS | 25.0% |
| ! | TTTATAAGCTTGATCAAGAA+TGG | + | chr7.1:11037680-11037699 | MS.gene018718:CDS | 25.0% |
| !! | ATAAAATGGGAACAATTTTC+TGG | + | chr7.1:11037452-11037471 | MS.gene018718:CDS | 25.0% |
| !! | ATTTTCCTTTTCTCCAATAT+TGG | - | chr7.1:11037353-11037372 | None:intergenic | 25.0% |
| !! | CATCAAATCCAAAACTTTTT+CGG | - | chr7.1:11037146-11037165 | None:intergenic | 25.0% |
| !!! | ATGATGAAAGGTATTACAAA+AGG | + | chr7.1:11037626-11037645 | MS.gene018718:CDS | 25.0% |
| !!! | TGATGAAAGGTATTACAAAA+GGG | + | chr7.1:11037627-11037646 | MS.gene018718:CDS | 25.0% |
| AAGCAATTAGTAGAGTATGA+TGG | + | chr7.1:11037574-11037593 | MS.gene018718:CDS | 30.0% | |
| ATCAAAGAGATAAAGTTTGG+AGG | - | chr7.1:11037086-11037105 | None:intergenic | 30.0% | |
| ATCATGTTAAAGGATGATTG+TGG | + | chr7.1:11037373-11037392 | MS.gene018718:CDS | 30.0% | |
| CAAATCTTCTTGAAGATTTG+TGG | + | chr7.1:11036819-11036838 | MS.gene018718:CDS | 30.0% | |
| CTACTTCTATTATGAAAGCA+GGG | + | chr7.1:11037813-11037832 | MS.gene018718:CDS | 30.0% | |
| GAGATCAAAGAGATAAAGTT+TGG | - | chr7.1:11037089-11037108 | None:intergenic | 30.0% | |
| GATTAGAACAAGAAGTTGAA+GGG | - | chr7.1:11037027-11037046 | None:intergenic | 30.0% | |
| TATAAGCTTGATCAAGAATG+GGG | + | chr7.1:11037682-11037701 | MS.gene018718:CDS | 30.0% | |
| TCAACTTCTTGTTCTAATCA+AGG | + | chr7.1:11037028-11037047 | MS.gene018718:CDS | 30.0% | |
| TCTACTTCTATTATGAAAGC+AGG | + | chr7.1:11037812-11037831 | MS.gene018718:CDS | 30.0% | |
| TGAAAATTGAACCAACTTCA+AGG | - | chr7.1:11037491-11037510 | None:intergenic | 30.0% | |
| TGATTAGAACAAGAAGTTGA+AGG | - | chr7.1:11037028-11037047 | None:intergenic | 30.0% | |
| TGCTGAAAATAGGCATATAA+GGG | + | chr7.1:11037531-11037550 | MS.gene018718:CDS | 30.0% | |
| TGTTTCCAATATTGGAGAAA+AGG | + | chr7.1:11037345-11037364 | MS.gene018718:CDS | 30.0% | |
| ! | AGACACAAATTTTGCATTGT+TGG | + | chr7.1:11037756-11037775 | MS.gene018718:CDS | 30.0% |
| ! | GGAAAATACCGAAAAAGTTT+TGG | + | chr7.1:11037135-11037154 | MS.gene018718:CDS | 30.0% |
| !! | AATTTTGATGTGGAATGCAA+AGG | - | chr7.1:11036949-11036968 | None:intergenic | 30.0% |
| !! | GATGAAAGGTATTACAAAAG+GGG | + | chr7.1:11037628-11037647 | MS.gene018718:CDS | 30.0% |
| !!! | AACTTTTTCGGTATTTTCCT+CGG | - | chr7.1:11037134-11037153 | None:intergenic | 30.0% |
| !!! | AATCGTAGTGTTCAGTTTTT+TGG | - | chr7.1:11036855-11036874 | None:intergenic | 30.0% |
| ACTTCTTGTTCTAATCAAGG+TGG | + | chr7.1:11037031-11037050 | MS.gene018718:CDS | 35.0% | |
| AGAAGTAAAAGATTTGGGTG+AGG | + | chr7.1:11037714-11037733 | MS.gene018718:CDS | 35.0% | |
| CAATTAGTAGAGTATGATGG+AGG | + | chr7.1:11037577-11037596 | MS.gene018718:CDS | 35.0% | |
| CTTCTTGTTCTAATCAAGGT+GGG | + | chr7.1:11037032-11037051 | MS.gene018718:CDS | 35.0% | |
| GAGTTGACTGTTTCCAATAT+TGG | + | chr7.1:11037337-11037356 | MS.gene018718:CDS | 35.0% | |
| GCCAAAATCTACAAACACTA+CGG | - | chr7.1:11036892-11036911 | None:intergenic | 35.0% | |
| GTGCTGAAAATAGGCATATA+AGG | + | chr7.1:11037530-11037549 | MS.gene018718:CDS | 35.0% | |
| TGTACCATTGTGCTGAAAAT+AGG | + | chr7.1:11037521-11037540 | MS.gene018718:CDS | 35.0% | |
| TTGATCAAGAATGGGGTAAA+TGG | + | chr7.1:11037689-11037708 | MS.gene018718:CDS | 35.0% | |
| ! | CTAAACCTGCTGACAAATTT+TGG | + | chr7.1:11037866-11037885 | MS.gene018718:CDS | 35.0% |
| ! | TATGCCTATTTTCAGCACAA+TGG | - | chr7.1:11037528-11037547 | None:intergenic | 35.0% |
| ! | TCCGTAGTGTTTGTAGATTT+TGG | + | chr7.1:11036888-11036907 | MS.gene018718:CDS | 35.0% |
| ! | TGGTTCAATGCGGTATATTT+TGG | - | chr7.1:11036987-11037006 | None:intergenic | 35.0% |
| !!! | CAATGCGGTATATTTTGGTT+TGG | - | chr7.1:11036982-11037001 | None:intergenic | 35.0% |
| !!! | GCACAATGGTACATGTTTTT+TGG | - | chr7.1:11037514-11037533 | None:intergenic | 35.0% |
| ATCACTGGATGGAACAAAGT+TGG | - | chr7.1:11037898-11037917 | None:intergenic | 40.0% | |
| CAAAAGGGGTTACTTCTTGA+AGG | + | chr7.1:11037642-11037661 | MS.gene018718:CDS | 40.0% | |
| CAAGGGACAACTTTATGTTG+TGG | + | chr7.1:11037429-11037448 | MS.gene018718:CDS | 40.0% | |
| CAATGCTCTTTCCTTGAAGT+TGG | + | chr7.1:11037477-11037496 | MS.gene018718:CDS | 40.0% | |
| CCAATCCAAAATTTGTCAGC+AGG | - | chr7.1:11037874-11037893 | None:intergenic | 40.0% | |
| ! | CCTGCTGACAAATTTTGGAT+TGG | + | chr7.1:11037871-11037890 | MS.gene018718:CDS | 40.0% |
| ! | GTATGATGGAGGTCTATATG+TGG | + | chr7.1:11037588-11037607 | MS.gene018718:CDS | 40.0% |
| ! | TTTTATTGAGGGTCGTTGCA+TGG | + | chr7.1:11037291-11037310 | MS.gene018718:CDS | 40.0% |
| !! | TGTTGGCTCGAGATTACTAT+GGG | + | chr7.1:11037773-11037792 | MS.gene018718:CDS | 40.0% |
| !! | TTGTTGGCTCGAGATTACTA+TGG | + | chr7.1:11037772-11037791 | MS.gene018718:CDS | 40.0% |
| !!! | CTTCTTGAAGGCTGTTTTTG+TGG | + | chr7.1:11037654-11037673 | MS.gene018718:CDS | 40.0% |
| GTTGAAGGGTTGTGATCATG+TGG | - | chr7.1:11037013-11037032 | None:intergenic | 45.0% | |
| TGGAATGCAAAGGTTGTGAG+AGG | - | chr7.1:11036939-11036958 | None:intergenic | 45.0% | |
| ! | GGGTGAGGTTTCGTTTGTTT+TGG | + | chr7.1:11037729-11037748 | MS.gene018718:CDS | 45.0% |
| ! | TTTCGGTATTTTCCTCGGCT+CGG | - | chr7.1:11037129-11037148 | None:intergenic | 45.0% |
| !! | CATGTGGTGATGGTTCAATG+CGG | - | chr7.1:11036997-11037016 | None:intergenic | 45.0% |
| ATGCAAAGGTTGTGAGAGGC+AGG | - | chr7.1:11036935-11036954 | None:intergenic | 50.0% | |
| GGGTTGTGATCATGTGGTGA+TGG | - | chr7.1:11037007-11037026 | None:intergenic | 50.0% | |
| TAATACGAGAATCCGAGCCG+AGG | + | chr7.1:11037114-11037133 | MS.gene018718:CDS | 50.0% | |
| CAAAGGTTGTGAGAGGCAGG+TGG | - | chr7.1:11036932-11036951 | None:intergenic | 55.0% | |
| AGGTTGTGAGAGGCAGGTGG+AGG | - | chr7.1:11036929-11036948 | None:intergenic | 60.0% | |
| TTGTGAGAGGCAGGTGGAGG+AGG | - | chr7.1:11036926-11036945 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 11036785 | 11037924 | 11036785 | ID=MS.gene018718 |
| chr7.1 | mRNA | 11036785 | 11037924 | 11036785 | ID=MS.gene018718.t1;Parent=MS.gene018718 |
| chr7.1 | exon | 11036785 | 11037924 | 11036785 | ID=MS.gene018718.t1.exon1;Parent=MS.gene018718.t1 |
| chr7.1 | CDS | 11036785 | 11037924 | 11036785 | ID=cds.MS.gene018718.t1;Parent=MS.gene018718.t1 |
| Gene Sequence |
| Protein sequence |
