Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023531.t1 | XP_003629719.2 | 92 | 376 | 28 | 1 | 1 | 376 | 11 | 384 | 3.80E-206 | 727.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023531.t1 | Q1PEZ8 | 30.3 | 346 | 201 | 8 | 3 | 341 | 5 | 317 | 9.5e-33 | 142.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023531.t1 | G7LIM0 | 92.0 | 376 | 28 | 1 | 1 | 376 | 11 | 384 | 2.7e-206 | 727.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene91760 | MS.gene023531 | PPI |
| MS.gene28903 | MS.gene023531 | PPI |
| MS.gene023531 | MS.gene018718 | PPI |
| MS.gene23497 | MS.gene023531 | PPI |
| MS.gene39445 | MS.gene023531 | PPI |
| MS.gene023531 | MS.gene017581 | PPI |
| MS.gene28904 | MS.gene023531 | PPI |
| MS.gene44191 | MS.gene023531 | PPI |
| MS.gene025209 | MS.gene023531 | PPI |
| MS.gene44190 | MS.gene023531 | PPI |
| MS.gene049886 | MS.gene023531 | PPI |
| MS.gene23495 | MS.gene023531 | PPI |
| MS.gene023531 | MS.gene017582 | PPI |
| MS.gene97013 | MS.gene023531 | PPI |
| MS.gene012160 | MS.gene023531 | PPI |
| MS.gene66307 | MS.gene023531 | PPI |
| MS.gene023531 | MS.gene064059 | PPI |
| MS.gene023531 | MS.gene025209 | PPI |
| MS.gene012159 | MS.gene023531 | PPI |
| MS.gene023531 | MS.gene39445 | PPI |
| MS.gene64423 | MS.gene023531 | PPI |
| MS.gene017582 | MS.gene023531 | PPI |
| MS.gene023531 | MS.gene08770 | PPI |
| MS.gene037197 | MS.gene023531 | PPI |
| MS.gene30094 | MS.gene023531 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023531.t1 | MTR_8g085760 | 93.883 | 376 | 21 | 1 | 1 | 376 | 11 | 384 | 0.0 | 733 |
| MS.gene023531.t1 | MTR_7g096720 | 53.264 | 383 | 149 | 10 | 6 | 375 | 16 | 381 | 7.30e-127 | 370 |
| MS.gene023531.t1 | MTR_4g088925 | 50.135 | 371 | 153 | 9 | 11 | 374 | 34 | 379 | 1.06e-106 | 318 |
| MS.gene023531.t1 | MTR_6g092570 | 41.710 | 386 | 166 | 15 | 2 | 372 | 7 | 348 | 1.85e-76 | 241 |
| MS.gene023531.t1 | MTR_5g079830 | 40.270 | 370 | 169 | 12 | 1 | 357 | 4 | 334 | 2.36e-68 | 221 |
| MS.gene023531.t1 | MTR_2g041510 | 35.825 | 388 | 193 | 14 | 2 | 367 | 5 | 358 | 3.42e-52 | 178 |
| MS.gene023531.t1 | MTR_2g041510 | 35.825 | 388 | 193 | 14 | 2 | 367 | 25 | 378 | 4.56e-52 | 178 |
| MS.gene023531.t1 | MTR_8g074610 | 34.278 | 388 | 207 | 13 | 1 | 367 | 23 | 383 | 6.60e-52 | 178 |
| MS.gene023531.t1 | MTR_8g074640 | 32.984 | 382 | 196 | 12 | 2 | 356 | 5 | 353 | 1.92e-48 | 168 |
| MS.gene023531.t1 | MTR_4g125090 | 35.976 | 328 | 146 | 13 | 2 | 323 | 44 | 313 | 2.26e-43 | 153 |
| MS.gene023531.t1 | MTR_7g096760 | 56.989 | 93 | 37 | 3 | 224 | 314 | 2 | 93 | 2.83e-24 | 97.1 |
| MS.gene023531.t1 | MTR_3g030050 | 23.371 | 445 | 223 | 17 | 1 | 368 | 14 | 417 | 4.14e-16 | 79.7 |
| MS.gene023531.t1 | MTR_1g026850 | 24.365 | 394 | 233 | 14 | 2 | 368 | 5 | 360 | 7.11e-14 | 72.4 |
| MS.gene023531.t1 | MTR_3g029620 | 23.558 | 416 | 223 | 18 | 1 | 368 | 1 | 369 | 4.69e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023531.t1 | AT2G26160 | 30.347 | 346 | 201 | 8 | 3 | 341 | 5 | 317 | 5.60e-40 | 144 |
| MS.gene023531.t1 | AT4G35733 | 27.177 | 379 | 237 | 8 | 4 | 373 | 7 | 355 | 3.04e-33 | 127 |
| MS.gene023531.t1 | AT1G44080 | 27.095 | 358 | 215 | 8 | 2 | 355 | 4 | 319 | 9.56e-30 | 117 |
| MS.gene023531.t1 | AT1G65770 | 27.649 | 387 | 197 | 13 | 1 | 356 | 1 | 335 | 2.83e-29 | 116 |
| MS.gene023531.t1 | AT1G65740 | 26.810 | 373 | 230 | 12 | 1 | 356 | 1 | 347 | 5.34e-25 | 105 |
| MS.gene023531.t1 | AT3G25750 | 26.934 | 349 | 214 | 13 | 2 | 342 | 4 | 319 | 3.04e-23 | 100 |
| MS.gene023531.t1 | AT3G25750 | 26.453 | 344 | 208 | 12 | 2 | 342 | 4 | 305 | 1.12e-22 | 98.2 |
| MS.gene023531.t1 | AT2G17030 | 26.374 | 364 | 199 | 13 | 1 | 330 | 1 | 329 | 1.88e-21 | 95.5 |
| MS.gene023531.t1 | AT1G57906 | 28.755 | 233 | 129 | 8 | 128 | 333 | 6 | 228 | 6.48e-13 | 68.2 |
| MS.gene023531.t1 | AT2G17036 | 23.011 | 352 | 213 | 11 | 1 | 326 | 1 | 320 | 4.92e-11 | 64.3 |
Find 68 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGTGCATGTTTGCAATAT+TGG | 0.191961 | 4.3:+15081624 | MS.gene023531:CDS |
| ACTTCAACTTCTTCTAATAA+AGG | 0.233510 | 4.3:+15081303 | MS.gene023531:CDS |
| CAAGGCCTATTGTTTCAATT+TGG | 0.239371 | 4.3:+15082115 | MS.gene023531:CDS |
| CTTGCAAATTATTTGATCAT+AGG | 0.244392 | 4.3:-15082194 | None:intergenic |
| GGGTGAAGCTTTGTTTGTTT+TGG | 0.247417 | 4.3:+15082013 | MS.gene023531:CDS |
| ATCATCATCATCCATTATTA+TGG | 0.249406 | 4.3:-15081661 | None:intergenic |
| TATAACTAACCATAACTCTT+TGG | 0.271598 | 4.3:-15081100 | None:intergenic |
| TTGTTAGCTCAAGGCTATTA+TGG | 0.272989 | 4.3:+15082056 | MS.gene023531:CDS |
| TTGATCAAGAATGGGGTAAA+TGG | 0.295549 | 4.3:+15081973 | MS.gene023531:CDS |
| TGTAGAAAATATTTAAGATA+TGG | 0.319060 | 4.3:-15081225 | None:intergenic |
| GTAAGCCTGCCAACAGCTTT+TGG | 0.333990 | 4.3:+15082150 | MS.gene023531:CDS |
| ATTCTCCAAATTGAAACAAT+AGG | 0.348900 | 4.3:-15082120 | None:intergenic |
| ATCATAGGGTTGAACAAAGT+TGG | 0.349987 | 4.3:-15082179 | None:intergenic |
| CTTTATGTTGTGGATGAAAA+CGG | 0.357862 | 4.3:+15081726 | MS.gene023531:CDS |
| CTCCGGGGATGGATATGTCT+TGG | 0.358073 | 4.3:-15081391 | None:intergenic |
| TAAGAAAACAACCATAATAA+TGG | 0.362578 | 4.3:+15081650 | MS.gene023531:CDS |
| CTTCAACTTCTTCTAATAAA+GGG | 0.370190 | 4.3:+15081304 | MS.gene023531:CDS |
| TTTATAAGCTTGATCAAGAA+TGG | 0.373053 | 4.3:+15081964 | MS.gene023531:CDS |
| TTTGATGAACTTTCGATTTG+TGG | 0.374755 | 4.3:+15081467 | MS.gene023531:CDS |
| ATGGTTTGATGTGCCAGATC+TGG | 0.383540 | 4.3:+15081992 | MS.gene023531:CDS |
| CAATCCTTTGACTTTGAAGT+TGG | 0.391090 | 4.3:+15081764 | MS.gene023531:CDS |
| GTGGCTCATAAAACTTGTTC+AGG | 0.397814 | 4.3:+15081326 | MS.gene023531:CDS |
| ATAACTAACCATAACTCTTT+GGG | 0.402986 | 4.3:-15081099 | None:intergenic |
| TTTATGTTGTGGATGAAAAC+GGG | 0.411799 | 4.3:+15081727 | MS.gene023531:CDS |
| TCCGGGGATGGATATGTCTT+GGG | 0.419316 | 4.3:-15081390 | None:intergenic |
| CAAAGTTGTACTGTTGTGAT+AGG | 0.419830 | 4.3:+15081799 | MS.gene023531:CDS |
| TTTCAGTATGCACCGCTTAG+TGG | 0.421484 | 4.3:+15081546 | MS.gene023531:CDS |
| ATAGGAATAAGCAGCACATA+TGG | 0.421633 | 4.3:+15081817 | MS.gene023531:CDS |
| TAAATCTTCCCAAAGAGTTA+TGG | 0.424821 | 4.3:+15081091 | MS.gene023531:CDS |
| TTGCAAATTATTTGATCATA+GGG | 0.438640 | 4.3:-15082193 | None:intergenic |
| TTATAAGCTTGATCAAGAAT+GGG | 0.444146 | 4.3:+15081965 | MS.gene023531:CDS |
| GTTTCAATTTGGAGAATTCA+AGG | 0.444647 | 4.3:+15082126 | MS.gene023531:CDS |
| CGATTTGTGGAGTTGTTTGA+AGG | 0.445651 | 4.3:+15081480 | MS.gene023531:CDS |
| CATAATTTCTCTAGATATCA+AGG | 0.448445 | 4.3:+15081516 | MS.gene023531:CDS |
| CTATCACAACAGTACAACTT+TGG | 0.466620 | 4.3:-15081798 | None:intergenic |
| ATGCGAGGTGTATGAGAGGA+AGG | 0.466661 | 4.3:-15081201 | None:intergenic |
| TCATAGGGTTGAACAAAGTT+GGG | 0.470111 | 4.3:-15082178 | None:intergenic |
| GACAAGTGGTGATGTGGTGC+TGG | 0.477374 | 4.3:-15081273 | None:intergenic |
| AACAAAGCTTCACCCAGATC+TGG | 0.480250 | 4.3:-15082005 | None:intergenic |
| AGGCCTTGCCTTTAGAAAAG+AGG | 0.480556 | 4.3:-15082100 | None:intergenic |
| CAAGGCCAAAAGCTGTTGGC+AGG | 0.480865 | 4.3:-15082155 | None:intergenic |
| ACGATGATATAATTCTTCAC+AGG | 0.485882 | 4.3:+15081697 | MS.gene023531:CDS |
| AAGCAGTTAGTAGAATATGA+TGG | 0.489008 | 4.3:+15081861 | MS.gene023531:CDS |
| AACTTCTCATTGTTAGCTCA+AGG | 0.527852 | 4.3:+15082047 | MS.gene023531:CDS |
| CAGGGAACAACTTTATGTTG+TGG | 0.530035 | 4.3:+15081716 | MS.gene023531:CDS |
| GGATGATGATGATGTATACA+TGG | 0.546547 | 4.3:+15081671 | MS.gene023531:CDS |
| TGGTTTGATGTGCCAGATCT+GGG | 0.557600 | 4.3:+15081993 | MS.gene023531:CDS |
| TGAACCAACTTCAAAGTCAA+AGG | 0.569063 | 4.3:-15081768 | None:intergenic |
| GTGTATGAGAGGAAGGAGAA+GGG | 0.571011 | 4.3:-15081194 | None:intergenic |
| GGTGTATGAGAGGAAGGAGA+AGG | 0.571544 | 4.3:-15081195 | None:intergenic |
| TCATAAGCAATATTTATACA+AGG | 0.574589 | 4.3:+15081926 | MS.gene023531:CDS |
| CGATGATATAATTCTTCACA+GGG | 0.575649 | 4.3:+15081698 | MS.gene023531:CDS |
| TAGGAATAAGCAGCACATAT+GGG | 0.577725 | 4.3:+15081818 | MS.gene023531:CDS |
| TCCCAAGACATATCCATCCC+CGG | 0.579489 | 4.3:+15081389 | MS.gene023531:CDS |
| TGGAATGCGAGGTGTATGAG+AGG | 0.599874 | 4.3:-15081205 | None:intergenic |
| CAACTTCTTCTAATAAAGGG+TGG | 0.603116 | 4.3:+15081307 | MS.gene023531:CDS |
| TATAAGCTTGATCAAGAATG+GGG | 0.611541 | 4.3:+15081966 | MS.gene023531:CDS |
| TGGGCAAGGCCAAAAGCTGT+TGG | 0.617625 | 4.3:-15082159 | None:intergenic |
| TATTTAAGATATGGAATGCG+AGG | 0.626977 | 4.3:-15081216 | None:intergenic |
| TTGAAGTTGAAGTTGACAAG+TGG | 0.628065 | 4.3:-15081287 | None:intergenic |
| GATGTGGTGCTGGTTCAATA+CGG | 0.633371 | 4.3:-15081263 | None:intergenic |
| GGGTTGAACAAAGTTGGGCA+AGG | 0.633410 | 4.3:-15082173 | None:intergenic |
| GAAGTTGACAAGTGGTGATG+TGG | 0.649377 | 4.3:-15081279 | None:intergenic |
| ATGATAACAAGATGGTGCAA+TGG | 0.658156 | 4.3:+15081067 | None:intergenic |
| GATGATGATGATGTATACAT+GGG | 0.676311 | 4.3:+15081672 | MS.gene023531:CDS |
| ATAACTTTGCAACCACTAAG+CGG | 0.690267 | 4.3:-15081558 | None:intergenic |
| ATATGATGGAAGTCTCTATG+TGG | 0.736365 | 4.3:+15081875 | MS.gene023531:CDS |
| AATTTCTCTAGATATCAAGG+TGG | 0.780792 | 4.3:+15081519 | MS.gene023531:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTAGAAAATATTTAAGATA+TGG | - | chr4.3:15081228-15081247 | None:intergenic | 15.0% |
| !! | TAAGAAAACAACCATAATAA+TGG | + | chr4.3:15081650-15081669 | MS.gene023531:CDS | 20.0% |
| !! | TCATAAGCAATATTTATACA+AGG | + | chr4.3:15081926-15081945 | MS.gene023531:CDS | 20.0% |
| !!! | TCATCAAATTCAATACTTTT+TGG | - | chr4.3:15081455-15081474 | None:intergenic | 20.0% |
| ! | AAGATCAAAGAGAAAAAGTT+TGG | - | chr4.3:15081364-15081383 | None:intergenic | 25.0% |
| ! | ACTTCAACTTCTTCTAATAA+AGG | + | chr4.3:15081303-15081322 | MS.gene023531:CDS | 25.0% |
| ! | ATAACTAACCATAACTCTTT+GGG | - | chr4.3:15081102-15081121 | None:intergenic | 25.0% |
| ! | ATCATCATCATCCATTATTA+TGG | - | chr4.3:15081664-15081683 | None:intergenic | 25.0% |
| ! | ATTCTCCAAATTGAAACAAT+AGG | - | chr4.3:15082123-15082142 | None:intergenic | 25.0% |
| ! | CATAATTTCTCTAGATATCA+AGG | + | chr4.3:15081516-15081535 | MS.gene023531:CDS | 25.0% |
| ! | CTTCAACTTCTTCTAATAAA+GGG | + | chr4.3:15081304-15081323 | MS.gene023531:CDS | 25.0% |
| ! | TATAACTAACCATAACTCTT+TGG | - | chr4.3:15081103-15081122 | None:intergenic | 25.0% |
| ! | TTATAAGCTTGATCAAGAAT+GGG | + | chr4.3:15081965-15081984 | MS.gene023531:CDS | 25.0% |
| ! | TTTATAAGCTTGATCAAGAA+TGG | + | chr4.3:15081964-15081983 | MS.gene023531:CDS | 25.0% |
| !!! | ACATTATTTTTACACTGCAT+AGG | + | chr4.3:15081595-15081614 | MS.gene023531:CDS | 25.0% |
| !!! | CAATACGGTATATTTTAGTT+TGG | - | chr4.3:15081251-15081270 | None:intergenic | 25.0% |
| !!! | CATTATTTTTACACTGCATA+GGG | + | chr4.3:15081596-15081615 | MS.gene023531:CDS | 25.0% |
| AAAGTGCATGTTTGCAATAT+TGG | + | chr4.3:15081624-15081643 | MS.gene023531:CDS | 30.0% | |
| AAGCAGTTAGTAGAATATGA+TGG | + | chr4.3:15081861-15081880 | MS.gene023531:CDS | 30.0% | |
| AATTTCTCTAGATATCAAGG+TGG | + | chr4.3:15081519-15081538 | MS.gene023531:CDS | 30.0% | |
| ACGATGATATAATTCTTCAC+AGG | + | chr4.3:15081697-15081716 | MS.gene023531:CDS | 30.0% | |
| ATCAAAGAGAAAAAGTTTGG+AGG | - | chr4.3:15081361-15081380 | None:intergenic | 30.0% | |
| CGATGATATAATTCTTCACA+GGG | + | chr4.3:15081698-15081717 | MS.gene023531:CDS | 30.0% | |
| CTTTATGTTGTGGATGAAAA+CGG | + | chr4.3:15081726-15081745 | MS.gene023531:CDS | 30.0% | |
| GTTTCAATTTGGAGAATTCA+AGG | + | chr4.3:15082126-15082145 | MS.gene023531:CDS | 30.0% | |
| TAAATCTTCCCAAAGAGTTA+TGG | + | chr4.3:15081091-15081110 | MS.gene023531:CDS | 30.0% | |
| TATAAGCTTGATCAAGAATG+GGG | + | chr4.3:15081966-15081985 | MS.gene023531:CDS | 30.0% | |
| TTTATGTTGTGGATGAAAAC+GGG | + | chr4.3:15081727-15081746 | MS.gene023531:CDS | 30.0% | |
| ! | GATGATGATGATGTATACAT+GGG | + | chr4.3:15081672-15081691 | MS.gene023531:CDS | 30.0% |
| ! | TATTTAAGATATGGAATGCG+AGG | - | chr4.3:15081219-15081238 | None:intergenic | 30.0% |
| ! | TGCATTTACCTCTTTTCTAA+AGG | + | chr4.3:15082092-15082111 | MS.gene023531:CDS | 30.0% |
| ! | TTTGATGAACTTTCGATTTG+TGG | + | chr4.3:15081467-15081486 | MS.gene023531:CDS | 30.0% |
| ! | TTTTTGGATAGTTTTCTCCT+GGG | - | chr4.3:15081439-15081458 | None:intergenic | 30.0% |
| AACTTCTCATTGTTAGCTCA+AGG | + | chr4.3:15082047-15082066 | MS.gene023531:CDS | 35.0% | |
| ATAACTTTGCAACCACTAAG+CGG | - | chr4.3:15081561-15081580 | None:intergenic | 35.0% | |
| ATAGGAATAAGCAGCACATA+TGG | + | chr4.3:15081817-15081836 | MS.gene023531:CDS | 35.0% | |
| ATCATAGGGTTGAACAAAGT+TGG | - | chr4.3:15082182-15082201 | None:intergenic | 35.0% | |
| CAAAGTTGTACTGTTGTGAT+AGG | + | chr4.3:15081799-15081818 | MS.gene023531:CDS | 35.0% | |
| CAACTTCTTCTAATAAAGGG+TGG | + | chr4.3:15081307-15081326 | MS.gene023531:CDS | 35.0% | |
| CAAGGCCTATTGTTTCAATT+TGG | + | chr4.3:15082115-15082134 | MS.gene023531:CDS | 35.0% | |
| CTATCACAACAGTACAACTT+TGG | - | chr4.3:15081801-15081820 | None:intergenic | 35.0% | |
| TAGGAATAAGCAGCACATAT+GGG | + | chr4.3:15081818-15081837 | MS.gene023531:CDS | 35.0% | |
| TCATAGGGTTGAACAAAGTT+GGG | - | chr4.3:15082181-15082200 | None:intergenic | 35.0% | |
| TGAACCAACTTCAAAGTCAA+AGG | - | chr4.3:15081771-15081790 | None:intergenic | 35.0% | |
| TTGAAGTTGAAGTTGACAAG+TGG | - | chr4.3:15081290-15081309 | None:intergenic | 35.0% | |
| TTGATCAAGAATGGGGTAAA+TGG | + | chr4.3:15081973-15081992 | MS.gene023531:CDS | 35.0% | |
| TTGTTAGCTCAAGGCTATTA+TGG | + | chr4.3:15082056-15082075 | MS.gene023531:CDS | 35.0% | |
| ! | ATATGATGGAAGTCTCTATG+TGG | + | chr4.3:15081875-15081894 | MS.gene023531:CDS | 35.0% |
| ! | ATGAAAACGGGACAATTTTC+TGG | + | chr4.3:15081739-15081758 | MS.gene023531:CDS | 35.0% |
| ! | CTTTTTGGATAGTTTTCTCC+TGG | - | chr4.3:15081440-15081459 | None:intergenic | 35.0% |
| ! | GGATGATGATGATGTATACA+TGG | + | chr4.3:15081671-15081690 | MS.gene023531:CDS | 35.0% |
| !! | CAATCCTTTGACTTTGAAGT+TGG | + | chr4.3:15081764-15081783 | MS.gene023531:CDS | 35.0% |
| !! | TTACCTCTTTTCTAAAGGCA+AGG | + | chr4.3:15082097-15082116 | MS.gene023531:CDS | 35.0% |
| !!! | GGTGAAGCTTTGTTTGTTTT+GGG | + | chr4.3:15082014-15082033 | MS.gene023531:CDS | 35.0% |
| CAGGGAACAACTTTATGTTG+TGG | + | chr4.3:15081716-15081735 | MS.gene023531:CDS | 40.0% | |
| CGATTTGTGGAGTTGTTTGA+AGG | + | chr4.3:15081480-15081499 | MS.gene023531:CDS | 40.0% | |
| ! | GTGGCTCATAAAACTTGTTC+AGG | + | chr4.3:15081326-15081345 | MS.gene023531:CDS | 40.0% |
| ! | TCTCCTGGGATGATACTTTT+TGG | - | chr4.3:15081425-15081444 | None:intergenic | 40.0% |
| !! | CTCCTGGGATGATACTTTTT+GGG | - | chr4.3:15081424-15081443 | None:intergenic | 40.0% |
| !!! | ACTTTTTGGGTGGTTTTCTC+CGG | - | chr4.3:15081411-15081430 | None:intergenic | 40.0% |
| !!! | GGGTGAAGCTTTGTTTGTTT+TGG | + | chr4.3:15082013-15082032 | MS.gene023531:CDS | 40.0% |
| AACAAAGCTTCACCCAGATC+TGG | - | chr4.3:15082008-15082027 | None:intergenic | 45.0% | |
| ATGGTTTGATGTGCCAGATC+TGG | + | chr4.3:15081992-15082011 | MS.gene023531:CDS | 45.0% | |
| GTGTATGAGAGGAAGGAGAA+GGG | - | chr4.3:15081197-15081216 | None:intergenic | 45.0% | |
| TGGTTTGATGTGCCAGATCT+GGG | + | chr4.3:15081993-15082012 | MS.gene023531:CDS | 45.0% | |
| TTTCAGTATGCACCGCTTAG+TGG | + | chr4.3:15081546-15081565 | MS.gene023531:CDS | 45.0% | |
| ! | AGGCCTTGCCTTTAGAAAAG+AGG | - | chr4.3:15082103-15082122 | None:intergenic | 45.0% |
| ! | GAAGTTGACAAGTGGTGATG+TGG | - | chr4.3:15081282-15081301 | None:intergenic | 45.0% |
| !! | CACCCAAAAAGTATCATCCC+AGG | + | chr4.3:15081419-15081438 | MS.gene023531:CDS | 45.0% |
| !! | CTGGGATGATACTTTTTGGG+TGG | - | chr4.3:15081421-15081440 | None:intergenic | 45.0% |
| !! | GATGTGGTGCTGGTTCAATA+CGG | - | chr4.3:15081266-15081285 | None:intergenic | 45.0% |
| !!! | CTTTTTGGGTGGTTTTCTCC+GGG | - | chr4.3:15081410-15081429 | None:intergenic | 45.0% |
| !!! | TTTTTGGGTGGTTTTCTCCG+GGG | - | chr4.3:15081409-15081428 | None:intergenic | 45.0% |
| ATGCGAGGTGTATGAGAGGA+AGG | - | chr4.3:15081204-15081223 | None:intergenic | 50.0% | |
| GGGTTGAACAAAGTTGGGCA+AGG | - | chr4.3:15082176-15082195 | None:intergenic | 50.0% | |
| GGTGTATGAGAGGAAGGAGA+AGG | - | chr4.3:15081198-15081217 | None:intergenic | 50.0% | |
| TCCCAAGACATATCCATCCC+CGG | + | chr4.3:15081389-15081408 | MS.gene023531:CDS | 50.0% | |
| TCCGGGGATGGATATGTCTT+GGG | - | chr4.3:15081393-15081412 | None:intergenic | 50.0% | |
| TGGAATGCGAGGTGTATGAG+AGG | - | chr4.3:15081208-15081227 | None:intergenic | 50.0% | |
| ! | GTAAGCCTGCCAACAGCTTT+TGG | + | chr4.3:15082150-15082169 | MS.gene023531:CDS | 50.0% |
| CAAGGCCAAAAGCTGTTGGC+AGG | - | chr4.3:15082158-15082177 | None:intergenic | 55.0% | |
| CTCCGGGGATGGATATGTCT+TGG | - | chr4.3:15081394-15081413 | None:intergenic | 55.0% | |
| TGGGCAAGGCCAAAAGCTGT+TGG | - | chr4.3:15082162-15082181 | None:intergenic | 55.0% | |
| ! | GACAAGTGGTGATGTGGTGC+TGG | - | chr4.3:15081276-15081295 | None:intergenic | 55.0% |
| ! | TGGGTGGTTTTCTCCGGGGA+TGG | - | chr4.3:15081405-15081424 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 15081078 | 15082208 | 15081078 | ID=MS.gene023531 |
| chr4.3 | mRNA | 15081078 | 15082208 | 15081078 | ID=MS.gene023531.t1;Parent=MS.gene023531 |
| chr4.3 | exon | 15081078 | 15082208 | 15081078 | ID=MS.gene023531.t1.exon1;Parent=MS.gene023531.t1 |
| chr4.3 | CDS | 15081078 | 15082208 | 15081078 | ID=cds.MS.gene023531.t1;Parent=MS.gene023531.t1 |
| Gene Sequence |
| Protein sequence |
