Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97013.t1 | XP_013449881.1 | 97.1 | 382 | 11 | 0 | 1 | 382 | 1 | 382 | 2.40E-216 | 761.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97013.t1 | Q9C6X9 | 30.1 | 352 | 198 | 9 | 15 | 359 | 7 | 317 | 1.9e-28 | 128.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97013.t1 | A0A072U2J1 | 97.1 | 382 | 11 | 0 | 1 | 382 | 1 | 382 | 1.7e-216 | 761.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04998 | MS.gene97013 | 0.807693 | 4.46E-50 | -1.69E-46 |
| MS.gene052533 | MS.gene97013 | 0.817176 | 3.78E-52 | -1.69E-46 |
| MS.gene053298 | MS.gene97013 | 0.831091 | 2.03E-55 | -1.69E-46 |
| MS.gene053963 | MS.gene97013 | 0.810587 | 1.07E-50 | -1.69E-46 |
| MS.gene054222 | MS.gene97013 | 0.801974 | 6.99E-49 | -1.69E-46 |
| MS.gene05636 | MS.gene97013 | 0.806268 | 8.93E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene97013 | 0.830196 | 3.36E-55 | -1.69E-46 |
| MS.gene058897 | MS.gene97013 | 0.801316 | 9.54E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene97013 | 0.800774 | 1.23E-48 | -1.69E-46 |
| MS.gene059965 | MS.gene97013 | 0.802436 | 5.62E-49 | -1.69E-46 |
| MS.gene061047 | MS.gene97013 | 0.801826 | 7.50E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene97013 | MS.gene012160 | PPI |
| MS.gene97013 | MS.gene017582 | PPI |
| MS.gene64423 | MS.gene97013 | PPI |
| MS.gene97013 | MS.gene064059 | PPI |
| MS.gene97013 | MS.gene28903 | PPI |
| MS.gene97013 | MS.gene025209 | PPI |
| MS.gene037197 | MS.gene97013 | PPI |
| MS.gene97013 | MS.gene28904 | PPI |
| MS.gene91760 | MS.gene97013 | PPI |
| MS.gene97013 | MS.gene39445 | PPI |
| MS.gene28903 | MS.gene97013 | PPI |
| MS.gene97013 | MS.gene08770 | PPI |
| MS.gene23497 | MS.gene97013 | PPI |
| MS.gene30094 | MS.gene97013 | PPI |
| MS.gene97013 | MS.gene66307 | PPI |
| MS.gene97013 | MS.gene023531 | PPI |
| MS.gene97013 | MS.gene44191 | PPI |
| MS.gene44190 | MS.gene97013 | PPI |
| MS.gene97013 | MS.gene018718 | PPI |
| MS.gene23495 | MS.gene97013 | PPI |
| MS.gene97013 | MS.gene049886 | PPI |
| MS.gene97013 | MS.gene017581 | PPI |
| MS.gene012159 | MS.gene97013 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97013.t1 | MTR_7g096720 | 97.120 | 382 | 11 | 0 | 1 | 382 | 1 | 382 | 0.0 | 772 |
| MS.gene97013.t1 | MTR_4g088925 | 66.022 | 362 | 109 | 3 | 21 | 382 | 34 | 381 | 3.97e-156 | 444 |
| MS.gene97013.t1 | MTR_8g085760 | 51.786 | 392 | 165 | 9 | 2 | 381 | 4 | 383 | 3.37e-125 | 366 |
| MS.gene97013.t1 | MTR_6g092570 | 43.548 | 372 | 167 | 15 | 16 | 378 | 11 | 348 | 3.48e-69 | 222 |
| MS.gene97013.t1 | MTR_5g079830 | 41.193 | 352 | 177 | 10 | 16 | 363 | 9 | 334 | 4.78e-63 | 207 |
| MS.gene97013.t1 | MTR_8g074610 | 36.554 | 383 | 182 | 17 | 6 | 359 | 20 | 370 | 4.32e-50 | 173 |
| MS.gene97013.t1 | MTR_2g041510 | 35.772 | 369 | 182 | 12 | 15 | 359 | 8 | 345 | 4.04e-46 | 162 |
| MS.gene97013.t1 | MTR_2g041510 | 35.772 | 369 | 182 | 12 | 15 | 359 | 28 | 365 | 6.16e-46 | 162 |
| MS.gene97013.t1 | MTR_8g074640 | 32.440 | 373 | 194 | 11 | 15 | 359 | 8 | 350 | 1.78e-45 | 160 |
| MS.gene97013.t1 | MTR_4g125090 | 38.339 | 313 | 139 | 12 | 16 | 325 | 48 | 309 | 2.43e-44 | 156 |
| MS.gene97013.t1 | MTR_7g096760 | 69.474 | 95 | 27 | 2 | 228 | 321 | 1 | 94 | 2.22e-35 | 127 |
| MS.gene97013.t1 | MTR_3g029650 | 25.858 | 379 | 215 | 11 | 15 | 378 | 7 | 334 | 3.23e-17 | 84.0 |
| MS.gene97013.t1 | MTR_3g029650 | 21.429 | 378 | 234 | 12 | 7 | 352 | 366 | 712 | 2.67e-12 | 68.9 |
| MS.gene97013.t1 | MTR_3g029800 | 23.513 | 353 | 208 | 12 | 15 | 348 | 6 | 315 | 1.57e-14 | 74.7 |
| MS.gene97013.t1 | MTR_6g018400 | 23.056 | 360 | 203 | 13 | 15 | 346 | 7 | 320 | 3.49e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97013.t1 | AT2G26160 | 29.714 | 350 | 216 | 11 | 15 | 360 | 7 | 330 | 3.90e-34 | 129 |
| MS.gene97013.t1 | AT1G65770 | 28.571 | 371 | 196 | 11 | 15 | 359 | 5 | 332 | 6.06e-34 | 129 |
| MS.gene97013.t1 | AT1G44080 | 29.830 | 352 | 199 | 9 | 15 | 359 | 7 | 317 | 1.88e-31 | 122 |
| MS.gene97013.t1 | AT4G35733 | 27.606 | 355 | 218 | 8 | 15 | 359 | 8 | 333 | 3.10e-28 | 114 |
| MS.gene97013.t1 | AT3G25750 | 27.095 | 358 | 202 | 12 | 15 | 360 | 7 | 317 | 1.35e-23 | 100 |
| MS.gene97013.t1 | AT3G25750 | 26.722 | 363 | 211 | 13 | 15 | 360 | 7 | 331 | 8.34e-23 | 99.0 |
| MS.gene97013.t1 | AT2G17030 | 24.590 | 366 | 216 | 11 | 15 | 348 | 5 | 342 | 3.89e-21 | 94.7 |
| MS.gene97013.t1 | AT1G65740 | 24.731 | 372 | 221 | 11 | 15 | 359 | 5 | 344 | 1.23e-20 | 92.8 |
| MS.gene97013.t1 | AT1G65760 | 26.146 | 371 | 195 | 12 | 9 | 348 | 1 | 323 | 2.08e-20 | 92.0 |
| MS.gene97013.t1 | AT2G17036 | 24.047 | 341 | 221 | 12 | 15 | 337 | 5 | 325 | 1.73e-14 | 74.7 |
| MS.gene97013.t1 | AT2G17036 | 24.047 | 341 | 221 | 12 | 15 | 337 | 4 | 324 | 1.81e-14 | 74.7 |
| MS.gene97013.t1 | AT5G60060 | 26.136 | 352 | 207 | 17 | 4 | 333 | 1 | 321 | 4.74e-12 | 67.4 |
Find 63 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAACCTGCTGACAAATTT+TGG | 0.080030 | 7.4:+12838927 | MS.gene97013:CDS |
| ACTTTATGTTGTGGATAAAA+TGG | 0.170692 | 7.4:+12838499 | MS.gene97013:CDS |
| GAGTTGACTGTTTCCAATAT+TGG | 0.239268 | 7.4:+12838398 | MS.gene97013:CDS |
| GTGCTGAAAATAGGCATATA+AGG | 0.260640 | 7.4:+12838591 | MS.gene97013:CDS |
| TCCGTAGTGTTTGTAGATTT+TGG | 0.264838 | 7.4:+12837949 | MS.gene97013:CDS |
| AGTCATCATGAAGATAAAAT+TGG | 0.275568 | 7.4:+12838266 | MS.gene97013:CDS |
| TGTACCATTGTGCTGAAAAT+AGG | 0.283196 | 7.4:+12838582 | MS.gene97013:CDS |
| GAGATCAAAGAGATAAAGTT+TGG | 0.285701 | 7.4:-12838147 | None:intergenic |
| TGGTTCAATGCGGTATATTT+TGG | 0.305635 | 7.4:-12838045 | None:intergenic |
| GGGTGAGGTTTCGTTTGTTT+TGG | 0.311852 | 7.4:+12838790 | MS.gene97013:CDS |
| AAAGGAAAATATCATGTTAA+AGG | 0.318603 | 7.4:+12838424 | MS.gene97013:CDS |
| TTGATCAAGAATGGGGTAAA+TGG | 0.326226 | 7.4:+12838750 | MS.gene97013:CDS |
| ATGGTTAGAAGTAAAAGATT+TGG | 0.332561 | 7.4:+12838769 | MS.gene97013:CDS |
| CAAATCTTCTTGAAGATTTG+TGG | 0.347804 | 7.4:+12837880 | MS.gene97013:CDS |
| TGGTTAGAAGTAAAAGATTT+GGG | 0.374795 | 7.4:+12838770 | MS.gene97013:CDS |
| CAATGCTCTTTCCTTGAAGT+TGG | 0.381115 | 7.4:+12838538 | MS.gene97013:CDS |
| CAAAAGGGGTTACTTCTTGA+AGG | 0.384442 | 7.4:+12838703 | MS.gene97013:CDS |
| TTGTGAGAGGCAGGTGGAGG+AGG | 0.384893 | 7.4:-12837984 | None:intergenic |
| AAATCTTCTTGAAGATTTGT+GGG | 0.389413 | 7.4:+12837881 | MS.gene97013:CDS |
| TTTATAAGCTTGATCAAGAA+TGG | 0.392244 | 7.4:+12838741 | MS.gene97013:CDS |
| CTTTATGTTGTGGATAAAAT+GGG | 0.396836 | 7.4:+12838500 | MS.gene97013:CDS |
| TCAACTTCTTGTTCTAATCA+AGG | 0.402165 | 7.4:+12838089 | MS.gene97013:CDS |
| ATGATGAAAGGTATTACAAA+AGG | 0.404208 | 7.4:+12838687 | MS.gene97013:CDS |
| CCAATCCAAAATTTGTCAGC+AGG | 0.420447 | 7.4:-12838932 | None:intergenic |
| TGATGAAAGGTATTACAAAA+GGG | 0.432135 | 7.4:+12838688 | MS.gene97013:CDS |
| TGAAAATTGAACCAACTTCA+AGG | 0.432491 | 7.4:-12838549 | None:intergenic |
| TTGTTGGCTCGAGATTACTA+TGG | 0.437431 | 7.4:+12838833 | MS.gene97013:CDS |
| TGTTTCCAATATTGGAGAAA+AGG | 0.445230 | 7.4:+12838406 | MS.gene97013:CDS |
| TTATAAGCTTGATCAAGAAT+GGG | 0.450966 | 7.4:+12838742 | MS.gene97013:CDS |
| TGATGATATAATACATTACA+AGG | 0.467606 | 7.4:+12838472 | MS.gene97013:CDS |
| TCTACTTCTATTATGAAAGC+AGG | 0.486961 | 7.4:+12838873 | MS.gene97013:CDS |
| TGCTGAAAATAGGCATATAA+GGG | 0.494278 | 7.4:+12838592 | MS.gene97013:CDS |
| CTTACAAATTAATTGATCAC+TGG | 0.508472 | 7.4:-12838971 | None:intergenic |
| ATCACTGGATGGAACAAAGT+TGG | 0.510777 | 7.4:-12838956 | None:intergenic |
| TGATTAGAACAAGAAGTTGA+AGG | 0.514698 | 7.4:-12838086 | None:intergenic |
| ATCAAAGAGATAAAGTTTGG+AGG | 0.516104 | 7.4:-12838144 | None:intergenic |
| GATTAGAACAAGAAGTTGAA+GGG | 0.519595 | 7.4:-12838085 | None:intergenic |
| ATTTATATATTAATGATGAA+AGG | 0.523166 | 7.4:+12838675 | MS.gene97013:CDS |
| CAAGGGACAACTTTATGTTG+TGG | 0.530035 | 7.4:+12838490 | MS.gene97013:CDS |
| ATGCAAAGGTTGTGAGAGGC+AGG | 0.537372 | 7.4:-12837993 | None:intergenic |
| AAGCAATTAGTAGAGTATGA+TGG | 0.538440 | 7.4:+12838635 | MS.gene97013:CDS |
| CAAATTAATTGATCACTGGA+TGG | 0.540924 | 7.4:-12838967 | None:intergenic |
| TGTTGGCTCGAGATTACTAT+GGG | 0.552161 | 7.4:+12838834 | MS.gene97013:CDS |
| AGGTTGTGAGAGGCAGGTGG+AGG | 0.559115 | 7.4:-12837987 | None:intergenic |
| CTTCTTGTTCTAATCAAGGT+GGG | 0.559628 | 7.4:+12838093 | MS.gene97013:CDS |
| GATGAAAGGTATTACAAAAG+GGG | 0.559891 | 7.4:+12838689 | MS.gene97013:CDS |
| AGAAGTAAAAGATTTGGGTG+AGG | 0.564111 | 7.4:+12838775 | MS.gene97013:CDS |
| GGGTTGTGATCATGTGGTGA+TGG | 0.571859 | 7.4:-12838065 | None:intergenic |
| GATGGATATGAATAAGATAG+TGG | 0.582410 | 7.4:+12837845 | MS.gene97013:CDS |
| GCCAAAATCTACAAACACTA+CGG | 0.595515 | 7.4:-12837950 | None:intergenic |
| CTACTTCTATTATGAAAGCA+GGG | 0.600724 | 7.4:+12838874 | MS.gene97013:CDS |
| ACTTCTTGTTCTAATCAAGG+TGG | 0.607280 | 7.4:+12838092 | MS.gene97013:CDS |
| ATCATGTTAAAGGATGATTG+TGG | 0.624512 | 7.4:+12838434 | MS.gene97013:CDS |
| TATAAGCTTGATCAAGAATG+GGG | 0.627945 | 7.4:+12838743 | MS.gene97013:CDS |
| CAAAGGTTGTGAGAGGCAGG+TGG | 0.633368 | 7.4:-12837990 | None:intergenic |
| GATGATATAATACATTACAA+GGG | 0.643392 | 7.4:+12838473 | MS.gene97013:CDS |
| TAATACGAGAATCCGAGCTG+AGG | 0.670321 | 7.4:+12838175 | MS.gene97013:CDS |
| GTTGAAGGGTTGTGATCATG+TGG | 0.682135 | 7.4:-12838071 | None:intergenic |
| TGGAATGCAAAGGTTGTGAG+AGG | 0.687706 | 7.4:-12837997 | None:intergenic |
| GTATGATGGAGGTCTATATG+TGG | 0.691113 | 7.4:+12838649 | MS.gene97013:CDS |
| CAATTAGTAGAGTATGATGG+AGG | 0.693642 | 7.4:+12838638 | MS.gene97013:CDS |
| AGAGTGTGCTATGAATGCGA+TGG | 0.712794 | 7.4:+12837827 | None:intergenic |
| CATGTGGTGATGGTTCAATG+CGG | 0.842243 | 7.4:-12838055 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATATATTAATGATGAA+AGG | + | chr7.4:12838675-12838694 | MS.gene97013:CDS | 10.0% |
| !! | AAAGGAAAATATCATGTTAA+AGG | + | chr7.4:12838424-12838443 | MS.gene97013:CDS | 20.0% |
| !! | GATGATATAATACATTACAA+GGG | + | chr7.4:12838473-12838492 | MS.gene97013:CDS | 20.0% |
| !! | TGATGATATAATACATTACA+AGG | + | chr7.4:12838472-12838491 | MS.gene97013:CDS | 20.0% |
| !!! | AGTAATCTTGTTTTTTATTG+AGG | + | chr7.4:12838340-12838359 | MS.gene97013:CDS | 20.0% |
| !!! | AGTAGAAAATAATTTTGATG+TGG | - | chr7.4:12838020-12838039 | None:intergenic | 20.0% |
| !!! | GTAATCTTGTTTTTTATTGA+GGG | + | chr7.4:12838341-12838360 | MS.gene97013:CDS | 20.0% |
| ! | AAATCTTCTTGAAGATTTGT+GGG | + | chr7.4:12837881-12837900 | MS.gene97013:CDS | 25.0% |
| ! | ACTTTATGTTGTGGATAAAA+TGG | + | chr7.4:12838499-12838518 | MS.gene97013:CDS | 25.0% |
| ! | AGTCATCATGAAGATAAAAT+TGG | + | chr7.4:12838266-12838285 | MS.gene97013:CDS | 25.0% |
| ! | ATGGTTAGAAGTAAAAGATT+TGG | + | chr7.4:12838769-12838788 | MS.gene97013:CDS | 25.0% |
| ! | CTTTATGTTGTGGATAAAAT+GGG | + | chr7.4:12838500-12838519 | MS.gene97013:CDS | 25.0% |
| ! | TGGTTAGAAGTAAAAGATTT+GGG | + | chr7.4:12838770-12838789 | MS.gene97013:CDS | 25.0% |
| ! | TTATAAGCTTGATCAAGAAT+GGG | + | chr7.4:12838742-12838761 | MS.gene97013:CDS | 25.0% |
| ! | TTTATAAGCTTGATCAAGAA+TGG | + | chr7.4:12838741-12838760 | MS.gene97013:CDS | 25.0% |
| !! | ATAAAATGGGAACAATTTTC+TGG | + | chr7.4:12838513-12838532 | MS.gene97013:CDS | 25.0% |
| !! | ATTTTCCTTTTCTCCAATAT+TGG | - | chr7.4:12838414-12838433 | None:intergenic | 25.0% |
| !! | CATCAAATCCAAAACTTTTT+CGG | - | chr7.4:12838207-12838226 | None:intergenic | 25.0% |
| !!! | ATGATGAAAGGTATTACAAA+AGG | + | chr7.4:12838687-12838706 | MS.gene97013:CDS | 25.0% |
| !!! | TGATGAAAGGTATTACAAAA+GGG | + | chr7.4:12838688-12838707 | MS.gene97013:CDS | 25.0% |
| AAGCAATTAGTAGAGTATGA+TGG | + | chr7.4:12838635-12838654 | MS.gene97013:CDS | 30.0% | |
| ATCAAAGAGATAAAGTTTGG+AGG | - | chr7.4:12838147-12838166 | None:intergenic | 30.0% | |
| ATCATGTTAAAGGATGATTG+TGG | + | chr7.4:12838434-12838453 | MS.gene97013:CDS | 30.0% | |
| CAAATCTTCTTGAAGATTTG+TGG | + | chr7.4:12837880-12837899 | MS.gene97013:CDS | 30.0% | |
| CTACTTCTATTATGAAAGCA+GGG | + | chr7.4:12838874-12838893 | MS.gene97013:CDS | 30.0% | |
| GAGATCAAAGAGATAAAGTT+TGG | - | chr7.4:12838150-12838169 | None:intergenic | 30.0% | |
| GATGGATATGAATAAGATAG+TGG | + | chr7.4:12837845-12837864 | MS.gene97013:CDS | 30.0% | |
| GATTAGAACAAGAAGTTGAA+GGG | - | chr7.4:12838088-12838107 | None:intergenic | 30.0% | |
| TATAAGCTTGATCAAGAATG+GGG | + | chr7.4:12838743-12838762 | MS.gene97013:CDS | 30.0% | |
| TCAACTTCTTGTTCTAATCA+AGG | + | chr7.4:12838089-12838108 | MS.gene97013:CDS | 30.0% | |
| TCTACTTCTATTATGAAAGC+AGG | + | chr7.4:12838873-12838892 | MS.gene97013:CDS | 30.0% | |
| TGAAAATTGAACCAACTTCA+AGG | - | chr7.4:12838552-12838571 | None:intergenic | 30.0% | |
| TGATTAGAACAAGAAGTTGA+AGG | - | chr7.4:12838089-12838108 | None:intergenic | 30.0% | |
| TGCTGAAAATAGGCATATAA+GGG | + | chr7.4:12838592-12838611 | MS.gene97013:CDS | 30.0% | |
| TGTTTCCAATATTGGAGAAA+AGG | + | chr7.4:12838406-12838425 | MS.gene97013:CDS | 30.0% | |
| ! | AGACACAAATTTTGCATTGT+TGG | + | chr7.4:12838817-12838836 | MS.gene97013:CDS | 30.0% |
| ! | GGAAAATACCGAAAAAGTTT+TGG | + | chr7.4:12838196-12838215 | MS.gene97013:CDS | 30.0% |
| !! | AATTTTGATGTGGAATGCAA+AGG | - | chr7.4:12838010-12838029 | None:intergenic | 30.0% |
| !! | GATGAAAGGTATTACAAAAG+GGG | + | chr7.4:12838689-12838708 | MS.gene97013:CDS | 30.0% |
| !!! | AATCGTAGTGTTCAGTTTTT+TGG | - | chr7.4:12837916-12837935 | None:intergenic | 30.0% |
| ACTTCTTGTTCTAATCAAGG+TGG | + | chr7.4:12838092-12838111 | MS.gene97013:CDS | 35.0% | |
| AGAAGTAAAAGATTTGGGTG+AGG | + | chr7.4:12838775-12838794 | MS.gene97013:CDS | 35.0% | |
| CAATTAGTAGAGTATGATGG+AGG | + | chr7.4:12838638-12838657 | MS.gene97013:CDS | 35.0% | |
| CTTCTTGTTCTAATCAAGGT+GGG | + | chr7.4:12838093-12838112 | MS.gene97013:CDS | 35.0% | |
| GAGTTGACTGTTTCCAATAT+TGG | + | chr7.4:12838398-12838417 | MS.gene97013:CDS | 35.0% | |
| GCCAAAATCTACAAACACTA+CGG | - | chr7.4:12837953-12837972 | None:intergenic | 35.0% | |
| GTGCTGAAAATAGGCATATA+AGG | + | chr7.4:12838591-12838610 | MS.gene97013:CDS | 35.0% | |
| TGTACCATTGTGCTGAAAAT+AGG | + | chr7.4:12838582-12838601 | MS.gene97013:CDS | 35.0% | |
| TTGATCAAGAATGGGGTAAA+TGG | + | chr7.4:12838750-12838769 | MS.gene97013:CDS | 35.0% | |
| ! | CTAAACCTGCTGACAAATTT+TGG | + | chr7.4:12838927-12838946 | MS.gene97013:CDS | 35.0% |
| ! | TATGCCTATTTTCAGCACAA+TGG | - | chr7.4:12838589-12838608 | None:intergenic | 35.0% |
| ! | TCCGTAGTGTTTGTAGATTT+TGG | + | chr7.4:12837949-12837968 | MS.gene97013:CDS | 35.0% |
| ! | TGGTTCAATGCGGTATATTT+TGG | - | chr7.4:12838048-12838067 | None:intergenic | 35.0% |
| !!! | CAATGCGGTATATTTTGGTT+TGG | - | chr7.4:12838043-12838062 | None:intergenic | 35.0% |
| !!! | GCACAATGGTACATGTTTTT+TGG | - | chr7.4:12838575-12838594 | None:intergenic | 35.0% |
| ATCACTGGATGGAACAAAGT+TGG | - | chr7.4:12838959-12838978 | None:intergenic | 40.0% | |
| CAAAAGGGGTTACTTCTTGA+AGG | + | chr7.4:12838703-12838722 | MS.gene97013:CDS | 40.0% | |
| CAAGGGACAACTTTATGTTG+TGG | + | chr7.4:12838490-12838509 | MS.gene97013:CDS | 40.0% | |
| CAATGCTCTTTCCTTGAAGT+TGG | + | chr7.4:12838538-12838557 | MS.gene97013:CDS | 40.0% | |
| CCAATCCAAAATTTGTCAGC+AGG | - | chr7.4:12838935-12838954 | None:intergenic | 40.0% | |
| ! | CCTGCTGACAAATTTTGGAT+TGG | + | chr7.4:12838932-12838951 | MS.gene97013:CDS | 40.0% |
| ! | GTATGATGGAGGTCTATATG+TGG | + | chr7.4:12838649-12838668 | MS.gene97013:CDS | 40.0% |
| ! | TTTCGGTATTTTCCTCAGCT+CGG | - | chr7.4:12838190-12838209 | None:intergenic | 40.0% |
| ! | TTTTATTGAGGGTCGTTGCA+TGG | + | chr7.4:12838352-12838371 | MS.gene97013:CDS | 40.0% |
| !! | TGTTGGCTCGAGATTACTAT+GGG | + | chr7.4:12838834-12838853 | MS.gene97013:CDS | 40.0% |
| !! | TTGTTGGCTCGAGATTACTA+TGG | + | chr7.4:12838833-12838852 | MS.gene97013:CDS | 40.0% |
| !!! | CTTCTTGAAGGCTGTTTTTG+TGG | + | chr7.4:12838715-12838734 | MS.gene97013:CDS | 40.0% |
| GTTGAAGGGTTGTGATCATG+TGG | - | chr7.4:12838074-12838093 | None:intergenic | 45.0% | |
| TAATACGAGAATCCGAGCTG+AGG | + | chr7.4:12838175-12838194 | MS.gene97013:CDS | 45.0% | |
| TGGAATGCAAAGGTTGTGAG+AGG | - | chr7.4:12838000-12838019 | None:intergenic | 45.0% | |
| ! | GGGTGAGGTTTCGTTTGTTT+TGG | + | chr7.4:12838790-12838809 | MS.gene97013:CDS | 45.0% |
| !! | CATGTGGTGATGGTTCAATG+CGG | - | chr7.4:12838058-12838077 | None:intergenic | 45.0% |
| ATGCAAAGGTTGTGAGAGGC+AGG | - | chr7.4:12837996-12838015 | None:intergenic | 50.0% | |
| GGGTTGTGATCATGTGGTGA+TGG | - | chr7.4:12838068-12838087 | None:intergenic | 50.0% | |
| CAAAGGTTGTGAGAGGCAGG+TGG | - | chr7.4:12837993-12838012 | None:intergenic | 55.0% | |
| AGGTTGTGAGAGGCAGGTGG+AGG | - | chr7.4:12837990-12838009 | None:intergenic | 60.0% | |
| TTGTGAGAGGCAGGTGGAGG+AGG | - | chr7.4:12837987-12838006 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 12837837 | 12838985 | 12837837 | ID=MS.gene97013 |
| chr7.4 | mRNA | 12837837 | 12838985 | 12837837 | ID=MS.gene97013.t1;Parent=MS.gene97013 |
| chr7.4 | exon | 12837837 | 12838985 | 12837837 | ID=MS.gene97013.t1.exon1;Parent=MS.gene97013.t1 |
| chr7.4 | CDS | 12837837 | 12838985 | 12837837 | ID=cds.MS.gene97013.t1;Parent=MS.gene97013.t1 |
| Gene Sequence |
| Protein sequence |
