Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66307.t1 | XP_003620929.2 | 89 | 365 | 40 | 0 | 1 | 365 | 2 | 366 | 1.10E-189 | 672.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66307.t1 | Q9SHY1 | 27.3 | 348 | 200 | 11 | 6 | 316 | 2 | 333 | 4.3e-22 | 107.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66307.t1 | G7KJU2 | 89.0 | 365 | 40 | 0 | 1 | 365 | 2 | 366 | 7.7e-190 | 672.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene66307 | MS.gene012160 | PPI |
| MS.gene66307 | MS.gene017582 | PPI |
| MS.gene66307 | MS.gene39445 | PPI |
| MS.gene66307 | MS.gene064059 | PPI |
| MS.gene23497 | MS.gene66307 | PPI |
| MS.gene66307 | MS.gene08770 | PPI |
| MS.gene66307 | MS.gene025209 | PPI |
| MS.gene049886 | MS.gene66307 | PPI |
| MS.gene23495 | MS.gene66307 | PPI |
| MS.gene44191 | MS.gene66307 | PPI |
| MS.gene012159 | MS.gene66307 | PPI |
| MS.gene44190 | MS.gene66307 | PPI |
| MS.gene97013 | MS.gene66307 | PPI |
| MS.gene64423 | MS.gene66307 | PPI |
| MS.gene012160 | MS.gene66307 | PPI |
| MS.gene66307 | MS.gene023531 | PPI |
| MS.gene66307 | MS.gene018718 | PPI |
| MS.gene66307 | MS.gene017581 | PPI |
| MS.gene28903 | MS.gene66307 | PPI |
| MS.gene037197 | MS.gene66307 | PPI |
| MS.gene30094 | MS.gene66307 | PPI |
| MS.gene28904 | MS.gene66307 | PPI |
| MS.gene91760 | MS.gene66307 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66307.t1 | MTR_6g092570 | 89.041 | 365 | 40 | 0 | 1 | 365 | 2 | 366 | 0.0 | 664 |
| MS.gene66307.t1 | MTR_5g079830 | 64.072 | 334 | 116 | 1 | 4 | 333 | 3 | 336 | 4.26e-143 | 411 |
| MS.gene66307.t1 | MTR_4g125090 | 71.429 | 294 | 62 | 3 | 1 | 294 | 39 | 310 | 6.57e-140 | 400 |
| MS.gene66307.t1 | MTR_8g085760 | 41.406 | 384 | 176 | 14 | 2 | 347 | 8 | 380 | 3.66e-79 | 248 |
| MS.gene66307.t1 | MTR_7g096720 | 42.895 | 373 | 168 | 15 | 10 | 347 | 16 | 378 | 2.21e-70 | 225 |
| MS.gene66307.t1 | MTR_4g088925 | 42.817 | 355 | 175 | 11 | 13 | 347 | 31 | 377 | 9.74e-67 | 216 |
| MS.gene66307.t1 | MTR_2g041510 | 33.600 | 375 | 196 | 11 | 3 | 342 | 2 | 358 | 1.10e-48 | 168 |
| MS.gene66307.t1 | MTR_2g041510 | 33.600 | 375 | 196 | 11 | 3 | 342 | 22 | 378 | 1.27e-48 | 169 |
| MS.gene66307.t1 | MTR_8g074610 | 33.957 | 374 | 202 | 11 | 3 | 342 | 21 | 383 | 1.55e-48 | 169 |
| MS.gene66307.t1 | MTR_8g074640 | 34.857 | 350 | 180 | 12 | 3 | 316 | 2 | 339 | 1.19e-46 | 163 |
| MS.gene66307.t1 | MTR_2g047180 | 26.842 | 380 | 218 | 16 | 5 | 343 | 2 | 362 | 7.79e-18 | 84.3 |
| MS.gene66307.t1 | MTR_3g029840 | 25.602 | 332 | 210 | 12 | 5 | 316 | 3 | 317 | 6.07e-17 | 81.6 |
| MS.gene66307.t1 | MTR_1g016570 | 26.852 | 324 | 191 | 11 | 7 | 316 | 21 | 312 | 2.82e-16 | 79.7 |
| MS.gene66307.t1 | MTR_3g029650 | 26.100 | 341 | 200 | 12 | 6 | 320 | 4 | 318 | 1.25e-15 | 79.0 |
| MS.gene66307.t1 | MTR_3g029650 | 24.501 | 351 | 212 | 16 | 6 | 316 | 371 | 708 | 3.45e-11 | 65.1 |
| MS.gene66307.t1 | MTR_1g026850 | 24.308 | 325 | 224 | 6 | 3 | 313 | 2 | 318 | 2.70e-15 | 76.6 |
| MS.gene66307.t1 | MTR_6g018390 | 25.946 | 370 | 233 | 11 | 5 | 343 | 3 | 362 | 6.24e-14 | 72.8 |
| MS.gene66307.t1 | MTR_3g030080 | 26.706 | 337 | 201 | 12 | 7 | 316 | 7 | 324 | 1.62e-13 | 71.6 |
| MS.gene66307.t1 | MTR_3g030380 | 27.401 | 354 | 211 | 13 | 6 | 337 | 4 | 333 | 2.18e-13 | 70.9 |
| MS.gene66307.t1 | MTR_6g018360 | 24.552 | 391 | 227 | 17 | 5 | 343 | 3 | 377 | 1.27e-12 | 68.9 |
| MS.gene66307.t1 | MTR_3g030560 | 26.284 | 331 | 195 | 16 | 6 | 305 | 3 | 315 | 2.46e-12 | 67.8 |
| MS.gene66307.t1 | MTR_3g029950 | 26.048 | 334 | 206 | 12 | 5 | 316 | 3 | 317 | 4.67e-12 | 67.0 |
| MS.gene66307.t1 | MTR_3g091990 | 22.419 | 339 | 231 | 7 | 6 | 316 | 6 | 340 | 6.38e-12 | 67.0 |
| MS.gene66307.t1 | MTR_3g030440 | 25.071 | 351 | 221 | 13 | 6 | 337 | 5 | 332 | 1.61e-11 | 65.5 |
| MS.gene66307.t1 | MTR_3g029920 | 24.928 | 345 | 202 | 15 | 6 | 316 | 8 | 329 | 6.13e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66307.t1 | AT2G17030 | 31.045 | 335 | 190 | 12 | 6 | 305 | 2 | 330 | 8.88e-30 | 118 |
| MS.gene66307.t1 | AT4G35733 | 26.111 | 360 | 237 | 9 | 1 | 342 | 1 | 349 | 1.03e-26 | 109 |
| MS.gene66307.t1 | AT2G26160 | 26.994 | 326 | 210 | 12 | 7 | 316 | 5 | 318 | 3.66e-26 | 107 |
| MS.gene66307.t1 | AT1G65770 | 24.167 | 360 | 234 | 12 | 6 | 341 | 2 | 346 | 1.29e-24 | 103 |
| MS.gene66307.t1 | AT1G65740 | 26.870 | 361 | 211 | 11 | 6 | 329 | 2 | 346 | 3.64e-24 | 102 |
| MS.gene66307.t1 | AT3G25750 | 26.462 | 325 | 202 | 11 | 6 | 316 | 4 | 305 | 2.19e-23 | 100 |
| MS.gene66307.t1 | AT3G25750 | 26.254 | 339 | 199 | 13 | 6 | 316 | 4 | 319 | 6.17e-22 | 95.9 |
| MS.gene66307.t1 | AT1G65760 | 28.000 | 350 | 181 | 16 | 7 | 316 | 5 | 323 | 2.92e-20 | 91.3 |
| MS.gene66307.t1 | AT5G60060 | 29.129 | 333 | 191 | 19 | 8 | 308 | 11 | 330 | 5.43e-19 | 87.8 |
| MS.gene66307.t1 | AT1G44080 | 29.052 | 327 | 192 | 16 | 6 | 316 | 4 | 306 | 7.71e-19 | 87.0 |
| MS.gene66307.t1 | AT2G17036 | 26.686 | 341 | 192 | 13 | 6 | 305 | 1 | 324 | 5.05e-18 | 85.1 |
| MS.gene66307.t1 | AT2G17036 | 26.686 | 341 | 192 | 13 | 6 | 305 | 2 | 325 | 6.19e-18 | 85.1 |
Find 62 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATCATACTTGATGTTTAT+TGG | 0.100363 | 6.4:+63572883 | None:intergenic |
| TTGTCTGCTAATGATTATTA+TGG | 0.198908 | 6.4:-63573042 | MS.gene66307:CDS |
| AAATTGCGTGTTTCCAATAT+TGG | 0.200165 | 6.4:-63573423 | MS.gene66307:CDS |
| CAACTTTATAAACATCATTA+AGG | 0.215923 | 6.4:+63573502 | None:intergenic |
| TAGTGATATAATCCTTTATA+TGG | 0.218896 | 6.4:-63573358 | MS.gene66307:CDS |
| CCAACTTGTTCTTCTGATAA+AGG | 0.220418 | 6.4:-63573714 | MS.gene66307:CDS |
| TGGTTGTAGGCGAAATATTT+TGG | 0.256246 | 6.4:+63573743 | None:intergenic |
| TGTTACAGCTTGAATAATTC+AGG | 0.256690 | 6.4:-63572973 | MS.gene66307:CDS |
| GGGTGATAATCTGTTTGTTT+TGG | 0.260278 | 6.4:-63573085 | MS.gene66307:CDS |
| CAAATTGTTATATCCAATAT+TGG | 0.264586 | 6.4:+63573410 | None:intergenic |
| TAAATCTTCCTCGAGAATTA+TGG | 0.265181 | 6.4:-63573917 | MS.gene66307:CDS |
| ATCGAATGTATTCAAATTGT+TGG | 0.300239 | 6.4:+63573881 | None:intergenic |
| GAAGAACAAGTTGGCGATAA+TGG | 0.319223 | 6.4:+63573723 | None:intergenic |
| TGAACACTGAACCAACTTAA+AGG | 0.326040 | 6.4:+63573281 | None:intergenic |
| ATATAACAATTTGATTATAG+TGG | 0.341519 | 6.4:-63573400 | MS.gene66307:CDS |
| TTTCATGAACTTACGAGTTA+AGG | 0.344479 | 6.4:-63573589 | MS.gene66307:CDS |
| GATATCCATGAGTAATTTGC+AGG | 0.367337 | 6.4:+63573161 | None:intergenic |
| CATAAACCTTCCCCATATAA+AGG | 0.368215 | 6.4:+63573346 | None:intergenic |
| CTTGCTACGATCATTACTTA+AGG | 0.389599 | 6.4:+63573254 | None:intergenic |
| GTCTTTGCCCTTCATAAAGA+TGG | 0.395219 | 6.4:-63573447 | MS.gene66307:CDS |
| CAACTTGTTCTTCTGATAAA+GGG | 0.395311 | 6.4:-63573713 | MS.gene66307:CDS |
| AACTTTATAAACATCATTAA+GGG | 0.411654 | 6.4:+63573503 | None:intergenic |
| ATCTGGCAGATTTCGTCACT+TGG | 0.437506 | 6.4:-63573664 | MS.gene66307:CDS |
| AATTTGATTATAGTGGATGA+TGG | 0.446265 | 6.4:-63573393 | MS.gene66307:CDS |
| AGTGATATAATCCTTTATAT+GGG | 0.446874 | 6.4:-63573357 | MS.gene66307:CDS |
| GTTTATGTTGTGGATAAAAG+TGG | 0.454963 | 6.4:-63573330 | MS.gene66307:CDS |
| TGATAAAGGGTGGATCATAA+AGG | 0.459624 | 6.4:-63573700 | MS.gene66307:CDS |
| CAATTGTTCATCCTTTAAGT+TGG | 0.460756 | 6.4:-63573292 | MS.gene66307:CDS |
| ATACTTGATGTTTATTGGAT+CGG | 0.463458 | 6.4:+63572888 | None:intergenic |
| TGATCGTAGCAAGAAGTGTT+TGG | 0.476653 | 6.4:-63573244 | MS.gene66307:CDS |
| TGTTGAGGGTCTCGGTCAGA+TGG | 0.482503 | 6.4:-63573469 | MS.gene66307:CDS |
| GTATGAGAAGGAGAAGGAAA+AGG | 0.495602 | 6.4:+63573807 | None:intergenic |
| TATGGGGAAGGTTTATGTTG+TGG | 0.499382 | 6.4:-63573340 | MS.gene66307:CDS |
| TGAGAAGGAGAAGGAAAAGG+AGG | 0.500425 | 6.4:+63573810 | None:intergenic |
| TGCTAATGATTATTATGGAT+TGG | 0.503114 | 6.4:-63573037 | MS.gene66307:CDS |
| CTGTCAGAATTAAACAAAGT+TGG | 0.509367 | 6.4:+63572916 | None:intergenic |
| AAGTTGGCGATAATGGTTGT+AGG | 0.512157 | 6.4:+63573730 | None:intergenic |
| ATGGCTTCGTGTAACAGACT+TGG | 0.516864 | 6.4:-63573106 | MS.gene66307:CDS |
| GAAGGAGAAGGAAAAGGAGG+GGG | 0.519305 | 6.4:+63573813 | None:intergenic |
| ATTTGATTATAGTGGATGAT+GGG | 0.520860 | 6.4:-63573392 | MS.gene66307:CDS |
| GAGAAGGAGAAGGAAAAGGA+GGG | 0.522134 | 6.4:+63573811 | None:intergenic |
| TATAATCCTTTATATGGGGA+AGG | 0.532104 | 6.4:-63573352 | MS.gene66307:CDS |
| AGAAGGAGAAGGAAAAGGAG+GGG | 0.553660 | 6.4:+63573812 | None:intergenic |
| GCTACGATCATTACTTAAGG+AGG | 0.554126 | 6.4:+63573257 | None:intergenic |
| CCTGCCTAAAAGACAGAAGT+AGG | 0.558915 | 6.4:+63573002 | None:intergenic |
| CCTTTATCAGAAGAACAAGT+TGG | 0.566018 | 6.4:+63573714 | None:intergenic |
| CGAAGTGTATGAGAAGGAGA+AGG | 0.572683 | 6.4:+63573801 | None:intergenic |
| CATACACTTCGCATTCCAGA+TGG | 0.573238 | 6.4:-63573789 | MS.gene66307:CDS |
| GCAATAAAGCACAGACACTA+CGG | 0.577192 | 6.4:+63573847 | None:intergenic |
| GAATGCCTGCAAATTACTCA+TGG | 0.577881 | 6.4:-63573166 | MS.gene66307:CDS |
| CTTGTTCTTCTGATAAAGGG+TGG | 0.584709 | 6.4:-63573710 | MS.gene66307:CDS |
| TGGCTTCGTGTAACAGACTT+GGG | 0.587201 | 6.4:-63573105 | MS.gene66307:CDS |
| CTACGATCATTACTTAAGGA+GGG | 0.587399 | 6.4:+63573258 | None:intergenic |
| ACTTTATAAACATCATTAAG+GGG | 0.592515 | 6.4:+63573504 | None:intergenic |
| TCGTAGCAAGAAGTGTTTGG+TGG | 0.602926 | 6.4:-63573241 | MS.gene66307:CDS |
| GGAATGCGAAGTGTATGAGA+AGG | 0.622387 | 6.4:+63573795 | None:intergenic |
| GTGATATAATCCTTTATATG+GGG | 0.623068 | 6.4:-63573356 | MS.gene66307:CDS |
| ATAACTAACCATAATTCTCG+AGG | 0.636598 | 6.4:+63573909 | None:intergenic |
| TTGATGGAGAATCAAGTCGA+TGG | 0.643650 | 6.4:-63573125 | MS.gene66307:CDS |
| AAGTGTTTGGTGGAGTCGTG+TGG | 0.654744 | 6.4:-63573231 | MS.gene66307:CDS |
| TGGATGATAACACAGTTGAC+TGG | 0.663344 | 6.4:-63573941 | MS.gene66307:CDS |
| GAATTAAACAAAGTTGGACA+AGG | 0.685348 | 6.4:+63572922 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTTTATAAACATCATTAA+GGG | + | chr6.4:63573309-63573328 | None:intergenic | 15.0% |
| !! | ATATAACAATTTGATTATAG+TGG | - | chr6.4:63573409-63573428 | MS.gene66307:CDS | 15.0% |
| !! | ACTTTATAAACATCATTAAG+GGG | + | chr6.4:63573308-63573327 | None:intergenic | 20.0% |
| !! | AGTGATATAATCCTTTATAT+GGG | - | chr6.4:63573452-63573471 | MS.gene66307:CDS | 20.0% |
| !! | CAAATTGTTATATCCAATAT+TGG | + | chr6.4:63573402-63573421 | None:intergenic | 20.0% |
| !! | CAACTTTATAAACATCATTA+AGG | + | chr6.4:63573310-63573329 | None:intergenic | 20.0% |
| !! | TAGTGATATAATCCTTTATA+TGG | - | chr6.4:63573451-63573470 | MS.gene66307:CDS | 20.0% |
| !!! | ATAAAAGTGGAATTATTTTC+TGG | - | chr6.4:63573492-63573511 | MS.gene66307:CDS | 20.0% |
| !!! | ATTATGTTGATGACATTTTT+TGG | - | chr6.4:63573864-63573883 | MS.gene66307:CDS | 20.0% |
| ! | ATACTTGATGTTTATTGGAT+CGG | + | chr6.4:63573924-63573943 | None:intergenic | 25.0% |
| ! | ATCGAATGTATTCAAATTGT+TGG | + | chr6.4:63572931-63572950 | None:intergenic | 25.0% |
| ! | GTGATATAATCCTTTATATG+GGG | - | chr6.4:63573453-63573472 | MS.gene66307:CDS | 25.0% |
| ! | TGCTAATGATTATTATGGAT+TGG | - | chr6.4:63573772-63573791 | MS.gene66307:CDS | 25.0% |
| ! | TTGTCTGCTAATGATTATTA+TGG | - | chr6.4:63573767-63573786 | MS.gene66307:CDS | 25.0% |
| !! | CAATTTTCCATCTTTATGAA+GGG | + | chr6.4:63573372-63573391 | None:intergenic | 25.0% |
| !!! | AATTTGATTATAGTGGATGA+TGG | - | chr6.4:63573416-63573435 | MS.gene66307:CDS | 25.0% |
| !!! | ATTTGATTATAGTGGATGAT+GGG | - | chr6.4:63573417-63573436 | MS.gene66307:CDS | 25.0% |
| AAATTGCGTGTTTCCAATAT+TGG | - | chr6.4:63573386-63573405 | MS.gene66307:CDS | 30.0% | |
| AAGGTTGAAAAATCGAAATC+TGG | - | chr6.4:63573128-63573147 | MS.gene66307:CDS | 30.0% | |
| AATAGCAAAAACTTACCATC+TGG | + | chr6.4:63573038-63573057 | None:intergenic | 30.0% | |
| ATAACTAACCATAATTCTCG+AGG | + | chr6.4:63572903-63572922 | None:intergenic | 30.0% | |
| CAATTGTTCATCCTTTAAGT+TGG | - | chr6.4:63573517-63573536 | MS.gene66307:CDS | 30.0% | |
| CTGTCAGAATTAAACAAAGT+TGG | + | chr6.4:63573896-63573915 | None:intergenic | 30.0% | |
| GAATTAAACAAAGTTGGACA+AGG | + | chr6.4:63573890-63573909 | None:intergenic | 30.0% | |
| GCATCATACTTGATGTTTAT+TGG | + | chr6.4:63573929-63573948 | None:intergenic | 30.0% | |
| GTTTATGTTGTGGATAAAAG+TGG | - | chr6.4:63573479-63573498 | MS.gene66307:CDS | 30.0% | |
| TAAATCTTCCTCGAGAATTA+TGG | - | chr6.4:63572892-63572911 | MS.gene66307:CDS | 30.0% | |
| TATAATCCTTTATATGGGGA+AGG | - | chr6.4:63573457-63573476 | MS.gene66307:CDS | 30.0% | |
| TGTTACAGCTTGAATAATTC+AGG | - | chr6.4:63573836-63573855 | MS.gene66307:CDS | 30.0% | |
| TTTCATGAACTTACGAGTTA+AGG | - | chr6.4:63573220-63573239 | MS.gene66307:CDS | 30.0% | |
| ! | CAACTTGTTCTTCTGATAAA+GGG | - | chr6.4:63573096-63573115 | MS.gene66307:CDS | 30.0% |
| ! | GCAATTTTCCATCTTTATGA+AGG | + | chr6.4:63573373-63573392 | None:intergenic | 30.0% |
| !! | ATCAGTGTTTTAAACGTTGA+TGG | - | chr6.4:63573668-63573687 | MS.gene66307:CDS | 30.0% |
| !! | GGTGATAATCTGTTTGTTTT+GGG | - | chr6.4:63573725-63573744 | MS.gene66307:CDS | 30.0% |
| CATAAACCTTCCCCATATAA+AGG | + | chr6.4:63573466-63573485 | None:intergenic | 35.0% | |
| CCTTTATCAGAAGAACAAGT+TGG | + | chr6.4:63573098-63573117 | None:intergenic | 35.0% | |
| CTACGATCATTACTTAAGGA+GGG | + | chr6.4:63573554-63573573 | None:intergenic | 35.0% | |
| CTTGCTACGATCATTACTTA+AGG | + | chr6.4:63573558-63573577 | None:intergenic | 35.0% | |
| TGAACACTGAACCAACTTAA+AGG | + | chr6.4:63573531-63573550 | None:intergenic | 35.0% | |
| TGATAAAGGGTGGATCATAA+AGG | - | chr6.4:63573109-63573128 | MS.gene66307:CDS | 35.0% | |
| ! | CCAACTTGTTCTTCTGATAA+AGG | - | chr6.4:63573095-63573114 | MS.gene66307:CDS | 35.0% |
| ! | GATATCCATGAGTAATTTGC+AGG | + | chr6.4:63573651-63573670 | None:intergenic | 35.0% |
| ! | GGGTGATAATCTGTTTGTTT+TGG | - | chr6.4:63573724-63573743 | MS.gene66307:CDS | 35.0% |
| ! | TGGTTGTAGGCGAAATATTT+TGG | + | chr6.4:63573069-63573088 | None:intergenic | 35.0% |
| !! | ACTCTCAATTTTTCTAGCGA+TGG | - | chr6.4:63573260-63573279 | MS.gene66307:CDS | 35.0% |
| !!! | AGTTGTCTTGTTTTCTGTTG+AGG | - | chr6.4:63573325-63573344 | MS.gene66307:CDS | 35.0% |
| !!! | GTTGTCTTGTTTTCTGTTGA+GGG | - | chr6.4:63573326-63573345 | MS.gene66307:CDS | 35.0% |
| CTTGTTCTTCTGATAAAGGG+TGG | - | chr6.4:63573099-63573118 | MS.gene66307:CDS | 40.0% | |
| GAATGCCTGCAAATTACTCA+TGG | - | chr6.4:63573643-63573662 | MS.gene66307:CDS | 40.0% | |
| GCAATAAAGCACAGACACTA+CGG | + | chr6.4:63572965-63572984 | None:intergenic | 40.0% | |
| GCTACGATCATTACTTAAGG+AGG | + | chr6.4:63573555-63573574 | None:intergenic | 40.0% | |
| GTATGAGAAGGAGAAGGAAA+AGG | + | chr6.4:63573005-63573024 | None:intergenic | 40.0% | |
| GTCTTTGCCCTTCATAAAGA+TGG | - | chr6.4:63573362-63573381 | MS.gene66307:CDS | 40.0% | |
| TATGGGGAAGGTTTATGTTG+TGG | - | chr6.4:63573469-63573488 | MS.gene66307:CDS | 40.0% | |
| TGGATGATAACACAGTTGAC+TGG | - | chr6.4:63572868-63572887 | MS.gene66307:CDS | 40.0% | |
| TTGATGGAGAATCAAGTCGA+TGG | - | chr6.4:63573684-63573703 | MS.gene66307:CDS | 40.0% | |
| ! | AAGTTGGCGATAATGGTTGT+AGG | + | chr6.4:63573082-63573101 | None:intergenic | 40.0% |
| ! | GAAGAACAAGTTGGCGATAA+TGG | + | chr6.4:63573089-63573108 | None:intergenic | 40.0% |
| ! | TGCACCTACTTCTGTCTTTT+AGG | - | chr6.4:63573803-63573822 | MS.gene66307:CDS | 40.0% |
| ! | TTGTTTTCTGTTGAGGGTCT+CGG | - | chr6.4:63573332-63573351 | MS.gene66307:CDS | 40.0% |
| !! | CTCAATTTTTCTAGCGATGG+AGG | - | chr6.4:63573263-63573282 | MS.gene66307:CDS | 40.0% |
| !! | TGATCGTAGCAAGAAGTGTT+TGG | - | chr6.4:63573565-63573584 | MS.gene66307:CDS | 40.0% |
| AGAAGGAGAAGGAAAAGGAG+GGG | + | chr6.4:63573000-63573019 | None:intergenic | 45.0% | |
| ATCTGGCAGATTTCGTCACT+TGG | - | chr6.4:63573145-63573164 | MS.gene66307:CDS | 45.0% | |
| ATGGCTTCGTGTAACAGACT+TGG | - | chr6.4:63573703-63573722 | MS.gene66307:CDS | 45.0% | |
| CATACACTTCGCATTCCAGA+TGG | - | chr6.4:63573020-63573039 | MS.gene66307:CDS | 45.0% | |
| CCTGCCTAAAAGACAGAAGT+AGG | + | chr6.4:63573810-63573829 | None:intergenic | 45.0% | |
| CGAAGTGTATGAGAAGGAGA+AGG | + | chr6.4:63573011-63573030 | None:intergenic | 45.0% | |
| GAGAAGGAGAAGGAAAAGGA+GGG | + | chr6.4:63573001-63573020 | None:intergenic | 45.0% | |
| GGAATGCGAAGTGTATGAGA+AGG | + | chr6.4:63573017-63573036 | None:intergenic | 45.0% | |
| TGAGAAGGAGAAGGAAAAGG+AGG | + | chr6.4:63573002-63573021 | None:intergenic | 45.0% | |
| TGGCTTCGTGTAACAGACTT+GGG | - | chr6.4:63573704-63573723 | MS.gene66307:CDS | 45.0% | |
| ! | CCTACTTCTGTCTTTTAGGC+AGG | - | chr6.4:63573807-63573826 | MS.gene66307:CDS | 45.0% |
| ! | GTCGTGTGGAAGTCTTTTTG+TGG | - | chr6.4:63573592-63573611 | MS.gene66307:CDS | 45.0% |
| !! | TCGTAGCAAGAAGTGTTTGG+TGG | - | chr6.4:63573568-63573587 | MS.gene66307:CDS | 45.0% |
| GAAGGAGAAGGAAAAGGAGG+GGG | + | chr6.4:63572999-63573018 | None:intergenic | 50.0% | |
| ! | AAGTGTTTGGTGGAGTCGTG+TGG | - | chr6.4:63573578-63573597 | MS.gene66307:CDS | 50.0% |
| TGTTGAGGGTCTCGGTCAGA+TGG | - | chr6.4:63573340-63573359 | MS.gene66307:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 63572867 | 63573964 | 63572867 | ID=MS.gene66307 |
| chr6.4 | mRNA | 63572867 | 63573964 | 63572867 | ID=MS.gene66307.t1;Parent=MS.gene66307 |
| chr6.4 | exon | 63572867 | 63573964 | 63572867 | ID=MS.gene66307.t1.exon1;Parent=MS.gene66307.t1 |
| chr6.4 | CDS | 63572867 | 63573964 | 63572867 | ID=cds.MS.gene66307.t1;Parent=MS.gene66307.t1 |
| Gene Sequence |
| Protein sequence |
