Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23497.t1 | XP_013449881.1 | 97.1 | 382 | 11 | 0 | 1 | 382 | 1 | 382 | 1.80E-216 | 761.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23497.t1 | Q1PEZ8 | 29.1 | 350 | 218 | 9 | 15 | 360 | 7 | 330 | 7.2e-28 | 126.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23497.t1 | A0A072U2J1 | 97.1 | 382 | 11 | 0 | 1 | 382 | 1 | 382 | 1.3e-216 | 761.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04998 | MS.gene23497 | 0.822288 | 2.57E-53 | -1.69E-46 |
| MS.gene052533 | MS.gene23497 | 0.806341 | 8.62E-50 | -1.69E-46 |
| MS.gene053298 | MS.gene23497 | 0.812705 | 3.71E-51 | -1.69E-46 |
| MS.gene054222 | MS.gene23497 | 0.80944 | 1.89E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene23497 | 0.803144 | 4.01E-49 | -1.69E-46 |
| MS.gene054893 | MS.gene23497 | 0.801516 | 8.68E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene23497 | MS.gene64423 | PPI |
| MS.gene64423 | MS.gene23497 | PPI |
| MS.gene23497 | MS.gene66307 | PPI |
| MS.gene23497 | MS.gene023531 | PPI |
| MS.gene037197 | MS.gene23497 | PPI |
| MS.gene23497 | MS.gene23495 | PPI |
| MS.gene23497 | MS.gene018718 | PPI |
| MS.gene23497 | MS.gene049886 | PPI |
| MS.gene23497 | MS.gene97013 | PPI |
| MS.gene23497 | MS.gene017581 | PPI |
| MS.gene30094 | MS.gene23497 | PPI |
| MS.gene23497 | MS.gene91760 | PPI |
| MS.gene91760 | MS.gene23497 | PPI |
| MS.gene23497 | MS.gene037197 | PPI |
| MS.gene23497 | MS.gene012159 | PPI |
| MS.gene23497 | MS.gene012160 | PPI |
| MS.gene23497 | MS.gene017582 | PPI |
| MS.gene23497 | MS.gene39445 | PPI |
| MS.gene23497 | MS.gene064059 | PPI |
| MS.gene23497 | MS.gene28903 | PPI |
| MS.gene23497 | MS.gene08770 | PPI |
| MS.gene23497 | MS.gene025209 | PPI |
| MS.gene23495 | MS.gene23497 | PPI |
| MS.gene23497 | MS.gene44190 | PPI |
| MS.gene23497 | MS.gene28904 | PPI |
| MS.gene012159 | MS.gene23497 | PPI |
| MS.gene23497 | MS.gene44191 | PPI |
| MS.gene23497 | MS.gene30094 | PPI |
| MS.gene44190 | MS.gene23497 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23497.t1 | MTR_7g096720 | 97.120 | 382 | 11 | 0 | 1 | 382 | 1 | 382 | 0.0 | 773 |
| MS.gene23497.t1 | MTR_4g088925 | 66.022 | 362 | 109 | 3 | 21 | 382 | 34 | 381 | 2.35e-156 | 445 |
| MS.gene23497.t1 | MTR_8g085760 | 51.531 | 392 | 166 | 9 | 2 | 381 | 4 | 383 | 3.21e-124 | 363 |
| MS.gene23497.t1 | MTR_6g092570 | 43.817 | 372 | 166 | 15 | 16 | 378 | 11 | 348 | 1.09e-69 | 223 |
| MS.gene23497.t1 | MTR_5g079830 | 41.193 | 352 | 177 | 10 | 16 | 363 | 9 | 334 | 3.82e-63 | 207 |
| MS.gene23497.t1 | MTR_8g074610 | 35.544 | 377 | 194 | 15 | 6 | 359 | 20 | 370 | 5.49e-49 | 170 |
| MS.gene23497.t1 | MTR_2g041510 | 35.772 | 369 | 182 | 12 | 15 | 359 | 8 | 345 | 1.01e-45 | 161 |
| MS.gene23497.t1 | MTR_2g041510 | 35.772 | 369 | 182 | 12 | 15 | 359 | 28 | 365 | 1.33e-45 | 161 |
| MS.gene23497.t1 | MTR_8g074640 | 32.440 | 373 | 194 | 11 | 15 | 359 | 8 | 350 | 7.24e-45 | 159 |
| MS.gene23497.t1 | MTR_4g125090 | 38.658 | 313 | 138 | 12 | 16 | 325 | 48 | 309 | 9.81e-45 | 157 |
| MS.gene23497.t1 | MTR_7g096760 | 69.474 | 95 | 27 | 2 | 228 | 321 | 1 | 94 | 1.88e-35 | 127 |
| MS.gene23497.t1 | MTR_3g029650 | 25.594 | 379 | 216 | 11 | 15 | 378 | 7 | 334 | 2.79e-16 | 80.9 |
| MS.gene23497.t1 | MTR_3g029650 | 21.429 | 378 | 234 | 12 | 7 | 352 | 366 | 712 | 4.69e-11 | 64.7 |
| MS.gene23497.t1 | MTR_3g029800 | 23.796 | 353 | 207 | 12 | 15 | 348 | 6 | 315 | 9.98e-16 | 78.2 |
| MS.gene23497.t1 | MTR_6g018390 | 24.595 | 370 | 196 | 15 | 15 | 351 | 7 | 326 | 1.86e-14 | 74.3 |
| MS.gene23497.t1 | MTR_6g018400 | 23.056 | 360 | 203 | 13 | 15 | 346 | 7 | 320 | 6.43e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23497.t1 | AT1G65770 | 28.571 | 371 | 196 | 11 | 15 | 359 | 5 | 332 | 1.91e-34 | 130 |
| MS.gene23497.t1 | AT2G26160 | 28.571 | 350 | 220 | 10 | 15 | 360 | 7 | 330 | 3.07e-33 | 127 |
| MS.gene23497.t1 | AT1G44080 | 29.830 | 352 | 199 | 9 | 15 | 359 | 7 | 317 | 5.69e-31 | 121 |
| MS.gene23497.t1 | AT4G35733 | 27.606 | 355 | 218 | 8 | 15 | 359 | 8 | 333 | 1.16e-27 | 112 |
| MS.gene23497.t1 | AT3G25750 | 27.654 | 358 | 200 | 13 | 15 | 360 | 7 | 317 | 4.59e-23 | 99.4 |
| MS.gene23497.t1 | AT3G25750 | 26.593 | 361 | 214 | 12 | 15 | 360 | 7 | 331 | 3.70e-22 | 97.1 |
| MS.gene23497.t1 | AT1G65760 | 26.146 | 371 | 195 | 12 | 9 | 348 | 1 | 323 | 9.35e-21 | 92.8 |
| MS.gene23497.t1 | AT1G65740 | 24.731 | 372 | 221 | 11 | 15 | 359 | 5 | 344 | 1.79e-20 | 92.4 |
| MS.gene23497.t1 | AT2G17030 | 24.863 | 366 | 215 | 12 | 15 | 348 | 5 | 342 | 5.83e-20 | 91.3 |
| MS.gene23497.t1 | AT2G17036 | 25.788 | 349 | 205 | 15 | 15 | 337 | 5 | 325 | 7.21e-14 | 72.8 |
| MS.gene23497.t1 | AT2G17036 | 25.788 | 349 | 205 | 15 | 15 | 337 | 4 | 324 | 7.25e-14 | 72.8 |
| MS.gene23497.t1 | AT5G60060 | 26.420 | 352 | 206 | 17 | 4 | 333 | 1 | 321 | 8.03e-13 | 69.7 |
Find 64 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAACCTGCTGACAAATTT+TGG | 0.080030 | 7.3:+14591250 | MS.gene23497:CDS |
| ACCTTATGTTGTGGATAAAA+TGG | 0.158826 | 7.3:+14590822 | MS.gene23497:CDS |
| GAGTTGACTGTTTCCAATAT+TGG | 0.239268 | 7.3:+14590721 | MS.gene23497:CDS |
| GTGCTGAAAATAGGCATATA+AGG | 0.260640 | 7.3:+14590914 | MS.gene23497:CDS |
| TCCGTAGTGTTTGTAGATTT+TGG | 0.264838 | 7.3:+14590272 | MS.gene23497:CDS |
| AGTCATCATGAAGATAAAAT+TGG | 0.275568 | 7.3:+14590589 | MS.gene23497:CDS |
| TGTACCATTGTGCTGAAAAT+AGG | 0.283196 | 7.3:+14590905 | MS.gene23497:CDS |
| GAGATCAAAGAGATAAAGTT+TGG | 0.285701 | 7.3:-14590470 | None:intergenic |
| TGGTTCAATGCGGTATATTT+TGG | 0.305635 | 7.3:-14590368 | None:intergenic |
| GGGTGAGGTTTCGTTTGTTT+TGG | 0.311852 | 7.3:+14591113 | MS.gene23497:CDS |
| AAAGGAAAATATCATGTTAA+AGG | 0.318603 | 7.3:+14590747 | MS.gene23497:CDS |
| TTGATCAAGAATGGGGTAAA+TGG | 0.326226 | 7.3:+14591073 | MS.gene23497:CDS |
| ATGGTTAGAAGTAAAAGATT+TGG | 0.332561 | 7.3:+14591092 | MS.gene23497:CDS |
| CAAATCTTCTTGAAGATTTG+TGG | 0.347804 | 7.3:+14590203 | MS.gene23497:CDS |
| TGGTTAGAAGTAAAAGATTT+GGG | 0.374795 | 7.3:+14591093 | MS.gene23497:CDS |
| CAATGCTCTTTCCTTGAAGT+TGG | 0.381115 | 7.3:+14590861 | MS.gene23497:CDS |
| CAAAAGGGGTTACTTCTTGA+AGG | 0.384442 | 7.3:+14591026 | MS.gene23497:CDS |
| TTGTGAGAGGCAGGTGGAGG+AGG | 0.384893 | 7.3:-14590307 | None:intergenic |
| AAATCTTCTTGAAGATTTGT+GGG | 0.389413 | 7.3:+14590204 | MS.gene23497:CDS |
| TTTATAAGCTTGATCAAGAA+TGG | 0.392244 | 7.3:+14591064 | MS.gene23497:CDS |
| TCAACTTCTTGTTCTAATCA+AGG | 0.402165 | 7.3:+14590412 | MS.gene23497:CDS |
| ATGATGAAAGGTATTACAAA+AGG | 0.404208 | 7.3:+14591010 | MS.gene23497:CDS |
| CCAATCCAAAATTTGTCAGC+AGG | 0.420447 | 7.3:-14591255 | None:intergenic |
| CCTTATGTTGTGGATAAAAT+GGG | 0.427399 | 7.3:+14590823 | MS.gene23497:CDS |
| TGATGAAAGGTATTACAAAA+GGG | 0.432135 | 7.3:+14591011 | MS.gene23497:CDS |
| TGAAAATTGAACCAACTTCA+AGG | 0.432491 | 7.3:-14590872 | None:intergenic |
| TTGTTGGCTCGAGATTACTA+TGG | 0.437431 | 7.3:+14591156 | MS.gene23497:CDS |
| TGTTTCCAATATTGGAGAAA+AGG | 0.445230 | 7.3:+14590729 | MS.gene23497:CDS |
| TTATAAGCTTGATCAAGAAT+GGG | 0.450966 | 7.3:+14591065 | MS.gene23497:CDS |
| TTCTATTGAGGGTCGTTGCA+TGG | 0.467549 | 7.3:+14590675 | MS.gene23497:CDS |
| TGATGATATAATACATTACA+AGG | 0.467606 | 7.3:+14590795 | MS.gene23497:CDS |
| TCTACTTCTATTATGAAAGC+AGG | 0.486961 | 7.3:+14591196 | MS.gene23497:CDS |
| TGCTGAAAATAGGCATATAA+GGG | 0.494278 | 7.3:+14590915 | MS.gene23497:CDS |
| CTTACAAATTAATTGATCAC+TGG | 0.508472 | 7.3:-14591294 | None:intergenic |
| ATCACTGGATGGAACAAAGT+TGG | 0.510777 | 7.3:-14591279 | None:intergenic |
| TGATTAGAACAAGAAGTTGA+AGG | 0.514698 | 7.3:-14590409 | None:intergenic |
| ATCAAAGAGATAAAGTTTGG+AGG | 0.516104 | 7.3:-14590467 | None:intergenic |
| GATTAGAACAAGAAGTTGAA+GGG | 0.519595 | 7.3:-14590408 | None:intergenic |
| ATTTATATATTAATGATGAA+AGG | 0.523166 | 7.3:+14590998 | MS.gene23497:CDS |
| ATGCAAAGGTTGTGAGAGGC+AGG | 0.537372 | 7.3:-14590316 | None:intergenic |
| AAGCAATTAGTAGAGTATGA+TGG | 0.538440 | 7.3:+14590958 | MS.gene23497:CDS |
| CAAATTAATTGATCACTGGA+TGG | 0.540924 | 7.3:-14591290 | None:intergenic |
| TGTTGGCTCGAGATTACTAT+GGG | 0.552161 | 7.3:+14591157 | MS.gene23497:CDS |
| AGGTTGTGAGAGGCAGGTGG+AGG | 0.559115 | 7.3:-14590310 | None:intergenic |
| CTTCTTGTTCTAATCAAGGT+GGG | 0.559628 | 7.3:+14590416 | MS.gene23497:CDS |
| GATGAAAGGTATTACAAAAG+GGG | 0.559891 | 7.3:+14591012 | MS.gene23497:CDS |
| CAAGGGACAACCTTATGTTG+TGG | 0.562773 | 7.3:+14590813 | MS.gene23497:CDS |
| AGAAGTAAAAGATTTGGGTG+AGG | 0.564111 | 7.3:+14591098 | MS.gene23497:CDS |
| GGGTTGTGATCATGTGGTGA+TGG | 0.571859 | 7.3:-14590388 | None:intergenic |
| GATGGATATGAATAAGATAG+TGG | 0.582410 | 7.3:+14590168 | MS.gene23497:CDS |
| GCCAAAATCTACAAACACTA+CGG | 0.595515 | 7.3:-14590273 | None:intergenic |
| CTACTTCTATTATGAAAGCA+GGG | 0.600724 | 7.3:+14591197 | MS.gene23497:CDS |
| ACTTCTTGTTCTAATCAAGG+TGG | 0.607280 | 7.3:+14590415 | MS.gene23497:CDS |
| ATCATGTTAAAGGATGATTG+TGG | 0.624512 | 7.3:+14590757 | MS.gene23497:CDS |
| TATAAGCTTGATCAAGAATG+GGG | 0.627945 | 7.3:+14591066 | MS.gene23497:CDS |
| CAAAGGTTGTGAGAGGCAGG+TGG | 0.633368 | 7.3:-14590313 | None:intergenic |
| GATGATATAATACATTACAA+GGG | 0.643392 | 7.3:+14590796 | MS.gene23497:CDS |
| TAATACGAGAATCCGAGCCG+AGG | 0.671509 | 7.3:+14590498 | MS.gene23497:CDS |
| GTTGAAGGGTTGTGATCATG+TGG | 0.682135 | 7.3:-14590394 | None:intergenic |
| TGGAATGCAAAGGTTGTGAG+AGG | 0.687706 | 7.3:-14590320 | None:intergenic |
| GTATGATGGAGGTCTATATG+TGG | 0.691113 | 7.3:+14590972 | MS.gene23497:CDS |
| CAATTAGTAGAGTATGATGG+AGG | 0.693642 | 7.3:+14590961 | MS.gene23497:CDS |
| AGAGTGTGCTATGAATGCGA+TGG | 0.712794 | 7.3:+14590150 | None:intergenic |
| CATGTGGTGATGGTTCAATG+CGG | 0.842243 | 7.3:-14590378 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATATATTAATGATGAA+AGG | + | chr7.3:14590998-14591017 | MS.gene23497:CDS | 10.0% |
| !! | AAAGGAAAATATCATGTTAA+AGG | + | chr7.3:14590747-14590766 | MS.gene23497:CDS | 20.0% |
| !! | GATGATATAATACATTACAA+GGG | + | chr7.3:14590796-14590815 | MS.gene23497:CDS | 20.0% |
| !! | TGATGATATAATACATTACA+AGG | + | chr7.3:14590795-14590814 | MS.gene23497:CDS | 20.0% |
| !!! | AGTAATTTTGTTTTCTATTG+AGG | + | chr7.3:14590663-14590682 | MS.gene23497:CDS | 20.0% |
| !!! | AGTAGAAAATAATTTTGATG+TGG | - | chr7.3:14590343-14590362 | None:intergenic | 20.0% |
| !!! | GTAATTTTGTTTTCTATTGA+GGG | + | chr7.3:14590664-14590683 | MS.gene23497:CDS | 20.0% |
| ! | AAATCTTCTTGAAGATTTGT+GGG | + | chr7.3:14590204-14590223 | MS.gene23497:CDS | 25.0% |
| ! | AGTCATCATGAAGATAAAAT+TGG | + | chr7.3:14590589-14590608 | MS.gene23497:CDS | 25.0% |
| ! | ATGGTTAGAAGTAAAAGATT+TGG | + | chr7.3:14591092-14591111 | MS.gene23497:CDS | 25.0% |
| ! | TGGTTAGAAGTAAAAGATTT+GGG | + | chr7.3:14591093-14591112 | MS.gene23497:CDS | 25.0% |
| ! | TTATAAGCTTGATCAAGAAT+GGG | + | chr7.3:14591065-14591084 | MS.gene23497:CDS | 25.0% |
| ! | TTTATAAGCTTGATCAAGAA+TGG | + | chr7.3:14591064-14591083 | MS.gene23497:CDS | 25.0% |
| !! | ATAAAATGGGAACAATTTTC+TGG | + | chr7.3:14590836-14590855 | MS.gene23497:CDS | 25.0% |
| !! | ATTTTCCTTTTCTCCAATAT+TGG | - | chr7.3:14590737-14590756 | None:intergenic | 25.0% |
| !! | CATCAAATCCAAAACTTTTT+CGG | - | chr7.3:14590530-14590549 | None:intergenic | 25.0% |
| !!! | ATGATGAAAGGTATTACAAA+AGG | + | chr7.3:14591010-14591029 | MS.gene23497:CDS | 25.0% |
| !!! | TGATGAAAGGTATTACAAAA+GGG | + | chr7.3:14591011-14591030 | MS.gene23497:CDS | 25.0% |
| AAGCAATTAGTAGAGTATGA+TGG | + | chr7.3:14590958-14590977 | MS.gene23497:CDS | 30.0% | |
| ACCTTATGTTGTGGATAAAA+TGG | + | chr7.3:14590822-14590841 | MS.gene23497:CDS | 30.0% | |
| ATCAAAGAGATAAAGTTTGG+AGG | - | chr7.3:14590470-14590489 | None:intergenic | 30.0% | |
| ATCATGTTAAAGGATGATTG+TGG | + | chr7.3:14590757-14590776 | MS.gene23497:CDS | 30.0% | |
| CAAATCTTCTTGAAGATTTG+TGG | + | chr7.3:14590203-14590222 | MS.gene23497:CDS | 30.0% | |
| CCTTATGTTGTGGATAAAAT+GGG | + | chr7.3:14590823-14590842 | MS.gene23497:CDS | 30.0% | |
| CTACTTCTATTATGAAAGCA+GGG | + | chr7.3:14591197-14591216 | MS.gene23497:CDS | 30.0% | |
| GAGATCAAAGAGATAAAGTT+TGG | - | chr7.3:14590473-14590492 | None:intergenic | 30.0% | |
| GATGGATATGAATAAGATAG+TGG | + | chr7.3:14590168-14590187 | MS.gene23497:CDS | 30.0% | |
| GATTAGAACAAGAAGTTGAA+GGG | - | chr7.3:14590411-14590430 | None:intergenic | 30.0% | |
| TATAAGCTTGATCAAGAATG+GGG | + | chr7.3:14591066-14591085 | MS.gene23497:CDS | 30.0% | |
| TCAACTTCTTGTTCTAATCA+AGG | + | chr7.3:14590412-14590431 | MS.gene23497:CDS | 30.0% | |
| TCTACTTCTATTATGAAAGC+AGG | + | chr7.3:14591196-14591215 | MS.gene23497:CDS | 30.0% | |
| TGAAAATTGAACCAACTTCA+AGG | - | chr7.3:14590875-14590894 | None:intergenic | 30.0% | |
| TGATTAGAACAAGAAGTTGA+AGG | - | chr7.3:14590412-14590431 | None:intergenic | 30.0% | |
| TGCTGAAAATAGGCATATAA+GGG | + | chr7.3:14590915-14590934 | MS.gene23497:CDS | 30.0% | |
| TGTTTCCAATATTGGAGAAA+AGG | + | chr7.3:14590729-14590748 | MS.gene23497:CDS | 30.0% | |
| ! | AGACACAAATTTTGCATTGT+TGG | + | chr7.3:14591140-14591159 | MS.gene23497:CDS | 30.0% |
| ! | GGAAAATACCGAAAAAGTTT+TGG | + | chr7.3:14590519-14590538 | MS.gene23497:CDS | 30.0% |
| !! | AATTTTGATGTGGAATGCAA+AGG | - | chr7.3:14590333-14590352 | None:intergenic | 30.0% |
| !! | GATGAAAGGTATTACAAAAG+GGG | + | chr7.3:14591012-14591031 | MS.gene23497:CDS | 30.0% |
| !!! | AACTTTTTCGGTATTTTCCT+CGG | - | chr7.3:14590518-14590537 | None:intergenic | 30.0% |
| !!! | AATCGTAGTGTTCAGTTTTT+TGG | - | chr7.3:14590239-14590258 | None:intergenic | 30.0% |
| ACTTCTTGTTCTAATCAAGG+TGG | + | chr7.3:14590415-14590434 | MS.gene23497:CDS | 35.0% | |
| AGAAGTAAAAGATTTGGGTG+AGG | + | chr7.3:14591098-14591117 | MS.gene23497:CDS | 35.0% | |
| CAATTAGTAGAGTATGATGG+AGG | + | chr7.3:14590961-14590980 | MS.gene23497:CDS | 35.0% | |
| CTTCTTGTTCTAATCAAGGT+GGG | + | chr7.3:14590416-14590435 | MS.gene23497:CDS | 35.0% | |
| GAGTTGACTGTTTCCAATAT+TGG | + | chr7.3:14590721-14590740 | MS.gene23497:CDS | 35.0% | |
| GCCAAAATCTACAAACACTA+CGG | - | chr7.3:14590276-14590295 | None:intergenic | 35.0% | |
| GTGCTGAAAATAGGCATATA+AGG | + | chr7.3:14590914-14590933 | MS.gene23497:CDS | 35.0% | |
| TGTACCATTGTGCTGAAAAT+AGG | + | chr7.3:14590905-14590924 | MS.gene23497:CDS | 35.0% | |
| TTGATCAAGAATGGGGTAAA+TGG | + | chr7.3:14591073-14591092 | MS.gene23497:CDS | 35.0% | |
| ! | CCCATTTTATCCACAACATA+AGG | - | chr7.3:14590826-14590845 | None:intergenic | 35.0% |
| ! | CTAAACCTGCTGACAAATTT+TGG | + | chr7.3:14591250-14591269 | MS.gene23497:CDS | 35.0% |
| ! | TATGCCTATTTTCAGCACAA+TGG | - | chr7.3:14590912-14590931 | None:intergenic | 35.0% |
| ! | TCCGTAGTGTTTGTAGATTT+TGG | + | chr7.3:14590272-14590291 | MS.gene23497:CDS | 35.0% |
| ! | TGGTTCAATGCGGTATATTT+TGG | - | chr7.3:14590371-14590390 | None:intergenic | 35.0% |
| !!! | CAATGCGGTATATTTTGGTT+TGG | - | chr7.3:14590366-14590385 | None:intergenic | 35.0% |
| !!! | GCACAATGGTACATGTTTTT+TGG | - | chr7.3:14590898-14590917 | None:intergenic | 35.0% |
| ATCACTGGATGGAACAAAGT+TGG | - | chr7.3:14591282-14591301 | None:intergenic | 40.0% | |
| CAAAAGGGGTTACTTCTTGA+AGG | + | chr7.3:14591026-14591045 | MS.gene23497:CDS | 40.0% | |
| CAATGCTCTTTCCTTGAAGT+TGG | + | chr7.3:14590861-14590880 | MS.gene23497:CDS | 40.0% | |
| CCAATCCAAAATTTGTCAGC+AGG | - | chr7.3:14591258-14591277 | None:intergenic | 40.0% | |
| ! | CCTGCTGACAAATTTTGGAT+TGG | + | chr7.3:14591255-14591274 | MS.gene23497:CDS | 40.0% |
| ! | GTATGATGGAGGTCTATATG+TGG | + | chr7.3:14590972-14590991 | MS.gene23497:CDS | 40.0% |
| !! | TGTTGGCTCGAGATTACTAT+GGG | + | chr7.3:14591157-14591176 | MS.gene23497:CDS | 40.0% |
| !! | TTGTTGGCTCGAGATTACTA+TGG | + | chr7.3:14591156-14591175 | MS.gene23497:CDS | 40.0% |
| !!! | CTTCTTGAAGGCTGTTTTTG+TGG | + | chr7.3:14591038-14591057 | MS.gene23497:CDS | 40.0% |
| CAAGGGACAACCTTATGTTG+TGG | + | chr7.3:14590813-14590832 | MS.gene23497:CDS | 45.0% | |
| GTTGAAGGGTTGTGATCATG+TGG | - | chr7.3:14590397-14590416 | None:intergenic | 45.0% | |
| TGGAATGCAAAGGTTGTGAG+AGG | - | chr7.3:14590323-14590342 | None:intergenic | 45.0% | |
| TTCTATTGAGGGTCGTTGCA+TGG | + | chr7.3:14590675-14590694 | MS.gene23497:CDS | 45.0% | |
| ! | GGGTGAGGTTTCGTTTGTTT+TGG | + | chr7.3:14591113-14591132 | MS.gene23497:CDS | 45.0% |
| ! | TTTCGGTATTTTCCTCGGCT+CGG | - | chr7.3:14590513-14590532 | None:intergenic | 45.0% |
| !! | CATGTGGTGATGGTTCAATG+CGG | - | chr7.3:14590381-14590400 | None:intergenic | 45.0% |
| ATGCAAAGGTTGTGAGAGGC+AGG | - | chr7.3:14590319-14590338 | None:intergenic | 50.0% | |
| GGGTTGTGATCATGTGGTGA+TGG | - | chr7.3:14590391-14590410 | None:intergenic | 50.0% | |
| TAATACGAGAATCCGAGCCG+AGG | + | chr7.3:14590498-14590517 | MS.gene23497:CDS | 50.0% | |
| CAAAGGTTGTGAGAGGCAGG+TGG | - | chr7.3:14590316-14590335 | None:intergenic | 55.0% | |
| AGGTTGTGAGAGGCAGGTGG+AGG | - | chr7.3:14590313-14590332 | None:intergenic | 60.0% | |
| TTGTGAGAGGCAGGTGGAGG+AGG | - | chr7.3:14590310-14590329 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 14590160 | 14591308 | 14590160 | ID=MS.gene23497 |
| chr7.3 | mRNA | 14590160 | 14591308 | 14590160 | ID=MS.gene23497.t1;Parent=MS.gene23497 |
| chr7.3 | exon | 14590160 | 14591308 | 14590160 | ID=MS.gene23497.t1.exon1;Parent=MS.gene23497.t1 |
| chr7.3 | CDS | 14590160 | 14591308 | 14590160 | ID=cds.MS.gene23497.t1;Parent=MS.gene23497.t1 |
| Gene Sequence |
| Protein sequence |
