Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020225.t1 | XP_013443999.1 | 95.3 | 344 | 16 | 0 | 1 | 344 | 1 | 344 | 2.00E-193 | 684.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020225.t1 | Q9SLN8 | 71.3 | 342 | 96 | 2 | 3 | 344 | 4 | 343 | 2.4e-139 | 496.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020225.t1 | A0A072TLD5 | 95.3 | 344 | 16 | 0 | 1 | 344 | 1 | 344 | 1.4e-193 | 684.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020225 | MS.gene067859 | PPI |
| MS.gene020225 | MS.gene39327 | PPI |
| MS.gene020225 | MS.gene020239 | PPI |
| MS.gene020225 | MS.gene022721 | PPI |
| MS.gene020225 | MS.gene54434 | PPI |
| MS.gene020225 | MS.gene022736 | PPI |
| MS.gene08162 | MS.gene020225 | PPI |
| MS.gene020225 | MS.gene39312 | PPI |
| MS.gene020225 | MS.gene020033 | PPI |
| MS.gene020077 | MS.gene020225 | PPI |
| MS.gene020225 | MS.gene020228 | PPI |
| MS.gene020225 | MS.gene022737 | PPI |
| MS.gene020225 | MS.gene39315 | PPI |
| MS.gene020225 | MS.gene41778 | PPI |
| MS.gene020225 | MS.gene022735 | PPI |
| MS.gene020225 | MS.gene042467 | PPI |
| MS.gene020225 | MS.gene45375 | PPI |
| MS.gene020225 | MS.gene020226 | PPI |
| MS.gene020225 | MS.gene020227 | PPI |
| MS.gene020225 | MS.gene069341 | PPI |
| MS.gene020225 | MS.gene020077 | PPI |
| MS.gene020225 | MS.gene54433 | PPI |
| MS.gene020225 | MS.gene39314 | PPI |
| MS.gene020225 | MS.gene022722 | PPI |
| MS.gene020225 | MS.gene97874 | PPI |
| MS.gene020225 | MS.gene020076 | PPI |
| MS.gene020225 | MS.gene022738 | PPI |
| MS.gene020225 | MS.gene39326 | PPI |
| MS.gene020225 | MS.gene39313 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020225.t1 | MTR_8g010030 | 95.349 | 344 | 16 | 0 | 1 | 344 | 1 | 344 | 0.0 | 690 |
| MS.gene020225.t1 | MTR_8g009820 | 85.174 | 344 | 50 | 1 | 1 | 344 | 60 | 402 | 0.0 | 599 |
| MS.gene020225.t1 | MTR_8g009980 | 81.449 | 345 | 62 | 2 | 1 | 344 | 1 | 344 | 0.0 | 582 |
| MS.gene020225.t1 | MTR_8g010020 | 81.977 | 344 | 30 | 1 | 1 | 344 | 1 | 312 | 0.0 | 570 |
| MS.gene020225.t1 | MTR_8g009840 | 81.361 | 338 | 61 | 2 | 1 | 338 | 1 | 336 | 0.0 | 568 |
| MS.gene020225.t1 | MTR_8g010000 | 80.233 | 344 | 43 | 1 | 1 | 344 | 1 | 319 | 0.0 | 564 |
| MS.gene020225.t1 | MTR_8g009830 | 79.360 | 344 | 69 | 2 | 1 | 344 | 1 | 342 | 0.0 | 560 |
| MS.gene020225.t1 | MTR_4g082970 | 67.647 | 340 | 108 | 2 | 4 | 342 | 10 | 348 | 1.50e-162 | 458 |
| MS.gene020225.t1 | MTR_7g406860 | 60.290 | 345 | 135 | 2 | 1 | 344 | 3 | 346 | 2.31e-143 | 409 |
| MS.gene020225.t1 | MTR_8g007325 | 82.192 | 219 | 38 | 1 | 1 | 219 | 1 | 218 | 5.42e-130 | 370 |
| MS.gene020225.t1 | MTR_0011s0280 | 46.243 | 346 | 181 | 3 | 3 | 344 | 2 | 346 | 1.24e-110 | 326 |
| MS.gene020225.t1 | MTR_2g088190 | 39.420 | 345 | 200 | 6 | 4 | 341 | 5 | 347 | 1.09e-79 | 247 |
| MS.gene020225.t1 | MTR_2g088220 | 39.938 | 323 | 185 | 6 | 4 | 319 | 6 | 326 | 8.61e-76 | 237 |
| MS.gene020225.t1 | MTR_2g088200 | 37.143 | 315 | 184 | 6 | 4 | 308 | 5 | 315 | 8.39e-69 | 219 |
| MS.gene020225.t1 | MTR_5g095030 | 58.594 | 128 | 53 | 0 | 215 | 342 | 9 | 136 | 1.23e-49 | 162 |
| MS.gene020225.t1 | MTR_4g086410 | 33.740 | 246 | 148 | 6 | 103 | 341 | 385 | 622 | 1.81e-26 | 110 |
| MS.gene020225.t1 | MTR_4g086400 | 32.653 | 245 | 152 | 6 | 103 | 341 | 245 | 482 | 1.10e-25 | 107 |
| MS.gene020225.t1 | MTR_4g086400 | 32.653 | 245 | 152 | 6 | 103 | 341 | 385 | 622 | 2.33e-25 | 107 |
| MS.gene020225.t1 | MTR_5g095020 | 48.438 | 64 | 30 | 2 | 24 | 86 | 1 | 62 | 4.38e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020225.t1 | AT5G16970 | 71.053 | 342 | 95 | 3 | 6 | 344 | 5 | 345 | 2.17e-179 | 500 |
| MS.gene020225.t1 | AT5G16990 | 70.968 | 341 | 96 | 3 | 6 | 344 | 4 | 343 | 5.16e-178 | 497 |
| MS.gene020225.t1 | AT5G17000 | 70.760 | 342 | 96 | 3 | 6 | 344 | 5 | 345 | 1.67e-177 | 496 |
| MS.gene020225.t1 | AT3G03080 | 69.565 | 345 | 102 | 2 | 2 | 344 | 7 | 350 | 2.01e-175 | 491 |
| MS.gene020225.t1 | AT1G26320 | 69.767 | 344 | 100 | 3 | 4 | 344 | 9 | 351 | 1.16e-174 | 489 |
| MS.gene020225.t1 | AT1G26320 | 68.605 | 344 | 99 | 4 | 4 | 344 | 9 | 346 | 3.02e-170 | 477 |
| MS.gene020225.t1 | AT5G37980 | 67.347 | 343 | 107 | 3 | 6 | 344 | 12 | 353 | 4.77e-170 | 477 |
| MS.gene020225.t1 | AT5G16960 | 65.507 | 345 | 115 | 3 | 1 | 342 | 1 | 344 | 8.47e-168 | 471 |
| MS.gene020225.t1 | AT5G16960 | 65.507 | 345 | 115 | 3 | 1 | 342 | 1 | 344 | 8.47e-168 | 471 |
| MS.gene020225.t1 | AT5G37940 | 64.723 | 343 | 116 | 3 | 6 | 344 | 12 | 353 | 6.13e-165 | 464 |
| MS.gene020225.t1 | AT5G38000 | 63.401 | 347 | 122 | 3 | 1 | 343 | 7 | 352 | 1.69e-161 | 456 |
| MS.gene020225.t1 | AT5G38000 | 62.281 | 342 | 121 | 4 | 1 | 335 | 7 | 347 | 4.58e-155 | 439 |
| MS.gene020225.t1 | AT3G59845 | 64.348 | 345 | 114 | 6 | 4 | 342 | 5 | 346 | 4.75e-152 | 431 |
| MS.gene020225.t1 | AT5G38000 | 60.526 | 342 | 111 | 4 | 6 | 343 | 12 | 333 | 6.09e-146 | 415 |
| MS.gene020225.t1 | AT5G16980 | 57.183 | 355 | 91 | 4 | 1 | 344 | 1 | 305 | 1.24e-135 | 388 |
| MS.gene020225.t1 | AT1G65560 | 57.225 | 346 | 141 | 6 | 4 | 344 | 7 | 350 | 1.75e-132 | 382 |
| MS.gene020225.t1 | AT5G16980 | 76.991 | 226 | 52 | 0 | 119 | 344 | 14 | 239 | 1.09e-127 | 365 |
| MS.gene020225.t1 | AT5G16980 | 76.991 | 226 | 52 | 0 | 119 | 344 | 14 | 239 | 1.09e-127 | 365 |
| MS.gene020225.t1 | AT3G59845 | 71.138 | 246 | 67 | 3 | 99 | 342 | 1 | 244 | 2.26e-120 | 347 |
| MS.gene020225.t1 | AT1G65560 | 59.779 | 271 | 105 | 3 | 78 | 344 | 4 | 274 | 1.84e-110 | 323 |
| MS.gene020225.t1 | AT5G17000 | 68.807 | 218 | 64 | 3 | 6 | 220 | 5 | 221 | 2.03e-104 | 306 |
| MS.gene020225.t1 | AT1G49670 | 31.153 | 321 | 197 | 11 | 33 | 341 | 310 | 618 | 2.42e-25 | 107 |
| MS.gene020225.t1 | AT1G49670 | 35.500 | 200 | 121 | 5 | 148 | 341 | 444 | 641 | 4.52e-23 | 100 |
| MS.gene020225.t1 | AT5G37960 | 54.667 | 75 | 34 | 0 | 265 | 339 | 27 | 101 | 3.10e-20 | 85.1 |
Find 69 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTGTTAAAGAATAAATT+TGG | 0.215277 | 8.3:+78372333 | MS.gene020225:CDS |
| GCCAAATTTGTTACACCTTC+AGG | 0.257477 | 8.3:-78372678 | None:intergenic |
| ATGTTCATGTCTGATTCTTT+AGG | 0.265462 | 8.3:-78369533 | None:intergenic |
| ACCTGAAGGTGTAACAAATT+TGG | 0.283637 | 8.3:+78372677 | MS.gene020225:CDS |
| AAGTAAATGTCAATGCCTTC+TGG | 0.290715 | 8.3:-78372552 | None:intergenic |
| CAGGACAAACTCTAAGAATT+TGG | 0.314905 | 8.3:-78372766 | None:intergenic |
| GTTCCTCTTTCGTACTATAC+TGG | 0.335975 | 8.3:+78371177 | MS.gene020225:CDS |
| CCAGCATAAGCGGTCATTCC+TGG | 0.343153 | 8.3:-78371599 | None:intergenic |
| ACCTCAATGCAACATTAAAA+AGG | 0.357102 | 8.3:+78372391 | MS.gene020225:CDS |
| TCGTACTATACTGGAATTCT+TGG | 0.360448 | 8.3:+78371186 | MS.gene020225:CDS |
| ATCTGGACACAAAGATTATA+AGG | 0.369357 | 8.3:+78371065 | MS.gene020225:CDS |
| TGAGAAAGGTCCTGCAGCTT+TGG | 0.369380 | 8.3:+78372842 | MS.gene020225:CDS |
| TTCATAAGATTTCTCATGTA+AGG | 0.372285 | 8.3:-78369638 | None:intergenic |
| TGCTATGTTGTTGGAAGTGC+TGG | 0.374726 | 8.3:+78371725 | MS.gene020225:CDS |
| GACACACCACAGCCAGCTAT+TGG | 0.386560 | 8.3:-78371030 | None:intergenic |
| GTGTCTAAAATTGTGGAATC+TGG | 0.396418 | 8.3:+78371048 | MS.gene020225:CDS |
| GGAGCAGTTGGTCAACTTGT+TGG | 0.405162 | 8.3:+78371680 | MS.gene020225:CDS |
| GCTTGTTGTTGCTCGTGATT+AGG | 0.411194 | 8.3:+78372902 | MS.gene020225:CDS |
| GCTTTGGTTGGCATATTTAG+TGG | 0.419133 | 8.3:+78372858 | MS.gene020225:CDS |
| TTGAAAAGTATTTGAGCTGC+AGG | 0.423797 | 8.3:-78371138 | None:intergenic |
| TATGCTGGTTTCTTTGAAGT+AGG | 0.475286 | 8.3:+78371614 | MS.gene020225:CDS |
| TGACATTTACTTTGAGAATG+TGG | 0.476919 | 8.3:+78372563 | MS.gene020225:CDS |
| TTGCATGGTTGCTATGTTGT+TGG | 0.478375 | 8.3:+78371716 | MS.gene020225:CDS |
| GCATAATTGCAGCCAATAGC+TGG | 0.483208 | 8.3:+78371018 | MS.gene020225:intron |
| TCAGCTGCCTCTGGAGCAGT+TGG | 0.487420 | 8.3:+78371668 | MS.gene020225:CDS |
| GACATTTACTTTGAGAATGT+GGG | 0.492013 | 8.3:+78372564 | MS.gene020225:CDS |
| TTGCGGAAGCTTGAGAGTTA+CGG | 0.493478 | 8.3:-78369567 | None:intergenic |
| TGTTTGAGCACAGGTATGCC+AGG | 0.500960 | 8.3:+78371581 | MS.gene020225:intron |
| TAAGGATGGTGATTTAGTGT+GGG | 0.501066 | 8.3:+78371083 | MS.gene020225:CDS |
| ATTCTGAAACACTATGTGTC+TGG | 0.502828 | 8.3:+78369506 | MS.gene020225:CDS |
| ACCTTCCCTTCTCTGATATG+AGG | 0.504227 | 8.3:-78372789 | None:intergenic |
| ATAAGGATGGTGATTTAGTG+TGG | 0.511603 | 8.3:+78371082 | MS.gene020225:CDS |
| CCAGGAATGACCGCTTATGC+TGG | 0.513456 | 8.3:+78371599 | MS.gene020225:CDS |
| ATATTTAGTGGTCACAATGT+TGG | 0.515907 | 8.3:+78372870 | MS.gene020225:CDS |
| CTGTGGTGTGTCTAAAATTG+TGG | 0.531627 | 8.3:+78371041 | MS.gene020225:CDS |
| TCCCTTCTCTGATATGAGGC+AGG | 0.531966 | 8.3:-78372785 | None:intergenic |
| CTCTTGAATATGAAACTCCA+TGG | 0.534749 | 8.3:+78372609 | MS.gene020225:CDS |
| AAGGATGGTGATTTAGTGTG+GGG | 0.534820 | 8.3:+78371084 | MS.gene020225:CDS |
| AAAGGTCCTGCAGCTTTGGT+TGG | 0.536064 | 8.3:+78372846 | MS.gene020225:CDS |
| ATTCCAGTATAGTACGAAAG+AGG | 0.547230 | 8.3:-78371180 | None:intergenic |
| CACACACAGGTATGCGCCCA+TGG | 0.561199 | 8.3:-78372626 | None:intergenic |
| TTCAAAGAAACCAGCATAAG+CGG | 0.566265 | 8.3:-78371609 | None:intergenic |
| ATAGCTGAGGGACTTGAGAA+AGG | 0.567156 | 8.3:+78372828 | MS.gene020225:CDS |
| GCCTCATATCAGAGAAGGGA+AGG | 0.568385 | 8.3:+78372788 | MS.gene020225:CDS |
| GGACACAAAGATTATAAGGA+TGG | 0.573962 | 8.3:+78371069 | MS.gene020225:CDS |
| GTCCTGCCTCATATCAGAGA+AGG | 0.579424 | 8.3:+78372783 | MS.gene020225:CDS |
| GGACAATTTGCTAAATTGCA+TGG | 0.586355 | 8.3:+78371701 | MS.gene020225:CDS |
| ACATTTACTTTGAGAATGTG+GGG | 0.586734 | 8.3:+78372565 | MS.gene020225:CDS |
| AATATGCCAACCAAAGCTGC+AGG | 0.593596 | 8.3:-78372852 | None:intergenic |
| TGAAAAGTATTTGAGCTGCA+GGG | 0.594487 | 8.3:-78371137 | None:intergenic |
| CATTTACTTTGAGAATGTGG+GGG | 0.604579 | 8.3:+78372566 | MS.gene020225:CDS |
| ACAATATCATTTGAACCTTG+CGG | 0.605343 | 8.3:-78369584 | None:intergenic |
| AGGATGGTGATTTAGTGTGG+GGG | 0.608116 | 8.3:+78371085 | MS.gene020225:CDS |
| TCCTGCCTCATATCAGAGAA+GGG | 0.611678 | 8.3:+78372784 | MS.gene020225:CDS |
| TATAAGCGGATTCGTATGCA+AGG | 0.615082 | 8.3:+78372711 | MS.gene020225:CDS |
| AAGTGCTGGAAGTAAAGAGA+AGG | 0.616160 | 8.3:+78371739 | MS.gene020225:CDS |
| ATTTACTTTGAGAATGTGGG+GGG | 0.620434 | 8.3:+78372567 | MS.gene020225:CDS |
| TAAATCAGGCTCTTTCCAGA+AGG | 0.623043 | 8.3:+78372537 | MS.gene020225:intron |
| AAGTTGACCAACTGCTCCAG+AGG | 0.627539 | 8.3:-78371675 | None:intergenic |
| ATAAATTGACTTACAGACTG+AGG | 0.631356 | 8.3:-78369698 | None:intergenic |
| TCTTGAATATGAAACTCCAT+GGG | 0.636007 | 8.3:+78372610 | MS.gene020225:CDS |
| TGGCACATATCATATATAAG+CGG | 0.642495 | 8.3:+78372697 | MS.gene020225:CDS |
| GTAACTCTCAAGCTTCCGCA+AGG | 0.644285 | 8.3:+78369569 | MS.gene020225:CDS |
| TTGCAGCCAATAGCTGGCTG+TGG | 0.657871 | 8.3:+78371024 | MS.gene020225:intron |
| TATAATCTTACTCAACCTGA+AGG | 0.658022 | 8.3:+78372663 | MS.gene020225:CDS |
| TATGTAGAAGACATAGCTGA+GGG | 0.663094 | 8.3:+78372816 | MS.gene020225:CDS |
| CATGGGCGCATACCTGTGTG+TGG | 0.680594 | 8.3:+78372627 | MS.gene020225:CDS |
| GTATGTAGAAGACATAGCTG+AGG | 0.691552 | 8.3:+78372815 | MS.gene020225:CDS |
| TGTGAGATCATTCCACACAC+AGG | 0.692179 | 8.3:-78372639 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTGACATATGATTAAAA+GGG | - | chr8.3:78369738-78369757 | None:intergenic | 15.0% |
| !!! | CGAAATTTTGTAATATATTT+AGG | - | chr8.3:78372093-78372112 | None:intergenic | 15.0% |
| !! | AAGATATCATAACTATAAGA+CGG | - | chr8.3:78371477-78371496 | None:intergenic | 20.0% |
| !! | AATTACAATAACAACTATCA+AGG | + | chr8.3:78372008-78372027 | MS.gene020225:intron | 20.0% |
| !! | CAATTTGACATATGATTAAA+AGG | - | chr8.3:78369739-78369758 | None:intergenic | 20.0% |
| !! | GAGTATACATTATACTTATT+AGG | + | chr8.3:78371518-78371537 | MS.gene020225:intron | 20.0% |
| !! | GATCTGTTAAAGAATAAATT+TGG | + | chr8.3:78372333-78372352 | MS.gene020225:CDS | 20.0% |
| !! | GTCAATAAAAAGAAACTAAA+TGG | - | chr8.3:78372259-78372278 | None:intergenic | 20.0% |
| !! | TATAATTACATGTGTTATGT+CGG | - | chr8.3:78371899-78371918 | None:intergenic | 20.0% |
| !!! | AAAAAATTGTGTTGTTGAAA+TGG | + | chr8.3:78369970-78369989 | MS.gene020225:intron | 20.0% |
| !!! | AAAAATTGTGTTGTTGAAAT+GGG | + | chr8.3:78369971-78369990 | MS.gene020225:intron | 20.0% |
| !!! | AAAGAAACTAAATGGATTTT+TGG | - | chr8.3:78372251-78372270 | None:intergenic | 20.0% |
| !!! | ATGTGATACGAAAATTTTTA+CGG | + | chr8.3:78370013-78370032 | MS.gene020225:intron | 20.0% |
| !!! | ATTGTACTTCTCTTAATTTT+TGG | + | chr8.3:78372177-78372196 | MS.gene020225:intron | 20.0% |
| !!! | GATAGTTGTTATTGTAATTA+GGG | - | chr8.3:78372007-78372026 | None:intergenic | 20.0% |
| !!! | GATATCATTTTATGTAAATC+AGG | + | chr8.3:78372523-78372542 | MS.gene020225:intron | 20.0% |
| !!! | GTAAGTCAATTTATTTTTCT+GGG | + | chr8.3:78369707-78369726 | MS.gene020225:intron | 20.0% |
| !!! | TCATTTTCTCAAATTATTAC+CGG | + | chr8.3:78371929-78371948 | MS.gene020225:intron | 20.0% |
| !!! | TGATAGTTGTTATTGTAATT+AGG | - | chr8.3:78372008-78372027 | None:intergenic | 20.0% |
| !!! | TGTAAGTCAATTTATTTTTC+TGG | + | chr8.3:78369706-78369725 | MS.gene020225:intron | 20.0% |
| !!! | TTGTACTTCTCTTAATTTTT+GGG | + | chr8.3:78372178-78372197 | MS.gene020225:intron | 20.0% |
| ! | AAAGACGTACATTAAAGTAA+AGG | - | chr8.3:78372301-78372320 | None:intergenic | 25.0% |
| ! | ACAAATTAGAAAGAGAATTG+GGG | + | chr8.3:78370167-78370186 | MS.gene020225:intron | 25.0% |
| ! | AGATATCATAACTATAAGAC+GGG | - | chr8.3:78371476-78371495 | None:intergenic | 25.0% |
| ! | AGGTAAGTAAAATTTGATCA+AGG | + | chr8.3:78370533-78370552 | MS.gene020225:intron | 25.0% |
| ! | ATATTCATCATTTATGTACG+AGG | - | chr8.3:78371799-78371818 | None:intergenic | 25.0% |
| ! | CAAAAGAAATTGCTAAGAAA+TGG | - | chr8.3:78369855-78369874 | None:intergenic | 25.0% |
| ! | CATTCAAAAGAACTACTTTA+AGG | - | chr8.3:78369764-78369783 | None:intergenic | 25.0% |
| ! | GACAAATTAGAAAGAGAATT+GGG | + | chr8.3:78370166-78370185 | MS.gene020225:intron | 25.0% |
| ! | TGACAAATTAGAAAGAGAAT+TGG | + | chr8.3:78370165-78370184 | MS.gene020225:intron | 25.0% |
| ! | TTACATAAAATGATATCCAC+CGG | - | chr8.3:78372520-78372539 | None:intergenic | 25.0% |
| ! | TTCATAAGATTTCTCATGTA+AGG | - | chr8.3:78369641-78369660 | None:intergenic | 25.0% |
| !! | ATTAAGAGAAGTACAATTGT+TGG | - | chr8.3:78372174-78372193 | None:intergenic | 25.0% |
| !!! | AAAAACATTCTCTCCTTTTT+TGG | - | chr8.3:78371645-78371664 | None:intergenic | 25.0% |
| !!! | AAAACATTCTCTCCTTTTTT+GGG | - | chr8.3:78371644-78371663 | None:intergenic | 25.0% |
| !!! | ACACTTATTTTTTGTAGTGT+TGG | - | chr8.3:78370086-78370105 | None:intergenic | 25.0% |
| !!! | GAAATGGATTATGATTAACA+AGG | + | chr8.3:78372224-78372243 | MS.gene020225:intron | 25.0% |
| ACAATATCATTTGAACCTTG+CGG | - | chr8.3:78369587-78369606 | None:intergenic | 30.0% | |
| ACCTCAATGCAACATTAAAA+AGG | + | chr8.3:78372391-78372410 | MS.gene020225:CDS | 30.0% | |
| AGCAGATACTAAACAAAGAA+AGG | - | chr8.3:78371323-78371342 | None:intergenic | 30.0% | |
| ATATTTAGTGGTCACAATGT+TGG | + | chr8.3:78372870-78372889 | MS.gene020225:CDS | 30.0% | |
| ATCTGGACACAAAGATTATA+AGG | + | chr8.3:78371065-78371084 | MS.gene020225:CDS | 30.0% | |
| ATGTTCATGTCTGATTCTTT+AGG | - | chr8.3:78369536-78369555 | None:intergenic | 30.0% | |
| ATGTTGTATGGAATAGAGTT+GGG | + | chr8.3:78370050-78370069 | MS.gene020225:intron | 30.0% | |
| ATTACACAATGCAGATCATA+AGG | + | chr8.3:78370644-78370663 | MS.gene020225:intron | 30.0% | |
| ATTACACAATGCAGATCATA+AGG | - | chr8.3:78370663-78370644 | None:intergenic | 30.0% | |
| CAGATACTAAACAAAGAAAG+GGG | - | chr8.3:78371321-78371340 | None:intergenic | 30.0% | |
| GCAGATACTAAACAAAGAAA+GGG | - | chr8.3:78371322-78371341 | None:intergenic | 30.0% | |
| GCATTGTGTAATAACTTTCA+AGG | + | chr8.3:78370839-78370858 | MS.gene020225:intron | 30.0% | |
| GGTTGAACAAAAGAAGAAAA+CGG | - | chr8.3:78371371-78371390 | None:intergenic | 30.0% | |
| TATAATCTTACTCAACCTGA+AGG | + | chr8.3:78372663-78372682 | MS.gene020225:CDS | 30.0% | |
| TCTTGAATATGAAACTCCAT+GGG | + | chr8.3:78372610-78372629 | MS.gene020225:CDS | 30.0% | |
| TCTTTAACTCTGTGATTCTT+GGG | + | chr8.3:78370477-78370496 | MS.gene020225:intron | 30.0% | |
| TGCTAGAATTCTCTTCAATT+AGG | - | chr8.3:78372140-78372159 | None:intergenic | 30.0% | |
| TGGCACATATCATATATAAG+CGG | + | chr8.3:78372697-78372716 | MS.gene020225:CDS | 30.0% | |
| TTCAGTTCCTAATAAGTACA+TGG | - | chr8.3:78371429-78371448 | None:intergenic | 30.0% | |
| TTGATGTGAGTATGATATCT+AGG | + | chr8.3:78371262-78371281 | MS.gene020225:intron | 30.0% | |
| ! | AAACTATGAAGTTTTCACAC+AGG | - | chr8.3:78371977-78371996 | None:intergenic | 30.0% |
| ! | ACATTTACTTTGAGAATGTG+GGG | + | chr8.3:78372565-78372584 | MS.gene020225:CDS | 30.0% |
| ! | ACCTTTTTAATGTTGCATTG+AGG | - | chr8.3:78372395-78372414 | None:intergenic | 30.0% |
| ! | ATAAATTGACTTACAGACTG+AGG | - | chr8.3:78369701-78369720 | None:intergenic | 30.0% |
| ! | ATCAAAAAAGCACAACAGAA+TGG | - | chr8.3:78371549-78371568 | None:intergenic | 30.0% |
| ! | GACATTTACTTTGAGAATGT+GGG | + | chr8.3:78372564-78372583 | MS.gene020225:CDS | 30.0% |
| ! | GACTTGTGGATTTTATAGTA+AGG | + | chr8.3:78370253-78370272 | MS.gene020225:intron | 30.0% |
| ! | GATTTTATAGTAAGGAGAGT+AGG | + | chr8.3:78370261-78370280 | MS.gene020225:intron | 30.0% |
| ! | TAATTAGTCTCTGTATTGCA+TGG | + | chr8.3:78369787-78369806 | MS.gene020225:intron | 30.0% |
| ! | TGACATTTACTTTGAGAATG+TGG | + | chr8.3:78372563-78372582 | MS.gene020225:CDS | 30.0% |
| ! | TGATACGAAAATTTTTACGG+CGG | + | chr8.3:78370016-78370035 | MS.gene020225:intron | 30.0% |
| ! | TTCTTTTGTTCAACCTGTTT+TGG | + | chr8.3:78371376-78371395 | MS.gene020225:intron | 30.0% |
| ! | TTTCTTTGTTTAGTATCTGC+TGG | + | chr8.3:78371322-78371341 | MS.gene020225:intron | 30.0% |
| !! | AGGAAGACAGTATTTTTGTT+CGG | - | chr8.3:78372281-78372300 | None:intergenic | 30.0% |
| !! | ATCAACTTGTTAGTTGGTTT+GGG | + | chr8.3:78369810-78369829 | MS.gene020225:intron | 30.0% |
| !! | CAATGGACTAGATGATATTT+GGG | + | chr8.3:78369893-78369912 | MS.gene020225:intron | 30.0% |
| !! | TAGAAAAGATGGTGGAAAAT+AGG | + | chr8.3:78370202-78370221 | MS.gene020225:intron | 30.0% |
| !! | TCAATGGACTAGATGATATT+TGG | + | chr8.3:78369892-78369911 | MS.gene020225:intron | 30.0% |
| !!! | CTTCTCTTAATTTTTGGGTT+AGG | + | chr8.3:78372183-78372202 | MS.gene020225:intron | 30.0% |
| !!! | TTTGGTTGTTGTTGTTGTTT+TGG | + | chr8.3:78370454-78370473 | MS.gene020225:intron | 30.0% |
| AAACCTTATCCCACTAAGTA+GGG | - | chr8.3:78370437-78370456 | None:intergenic | 35.0% | |
| AAATCTCAACAAGAGAACTC+AGG | - | chr8.3:78370622-78370641 | None:intergenic | 35.0% | |
| AAGTAAATGTCAATGCCTTC+TGG | - | chr8.3:78372555-78372574 | None:intergenic | 35.0% | |
| AATAACTTTCAAGGAACTGC+TGG | + | chr8.3:78370848-78370867 | MS.gene020225:intron | 35.0% | |
| AGAATTTCGATGGATCATTC+AGG | - | chr8.3:78370591-78370610 | None:intergenic | 35.0% | |
| AGTCAGATCAATAGAAGAAG+AGG | + | chr8.3:78370297-78370316 | MS.gene020225:intron | 35.0% | |
| ATAAGGATGGTGATTTAGTG+TGG | + | chr8.3:78371082-78371101 | MS.gene020225:CDS | 35.0% | |
| ATTCCAGTATAGTACGAAAG+AGG | - | chr8.3:78371183-78371202 | None:intergenic | 35.0% | |
| CTCTTGAATATGAAACTCCA+TGG | + | chr8.3:78372609-78372628 | MS.gene020225:CDS | 35.0% | |
| CTTTAACTCTGTGATTCTTG+GGG | + | chr8.3:78370478-78370497 | MS.gene020225:intron | 35.0% | |
| GAATGAGCCATGTACTTATT+AGG | + | chr8.3:78371419-78371438 | MS.gene020225:intron | 35.0% | |
| GATGTTGTATGGAATAGAGT+TGG | + | chr8.3:78370049-78370068 | MS.gene020225:intron | 35.0% | |
| GGAAACAAACAGAATTTCGA+TGG | - | chr8.3:78370601-78370620 | None:intergenic | 35.0% | |
| GGAAAGTGGTTATGTGATTT+GGG | + | chr8.3:78370876-78370895 | MS.gene020225:intron | 35.0% | |
| GGACACAAAGATTATAAGGA+TGG | + | chr8.3:78371069-78371088 | MS.gene020225:CDS | 35.0% | |
| GTAAGACAAAGGATGTTGTA+TGG | + | chr8.3:78370038-78370057 | MS.gene020225:intron | 35.0% | |
| GTACATGGCTCATTCAATAT+TGG | - | chr8.3:78371414-78371433 | None:intergenic | 35.0% | |
| GTCTTTAACTCTGTGATTCT+TGG | + | chr8.3:78370476-78370495 | MS.gene020225:intron | 35.0% | |
| GTGGTAAGACTAAATGAGAT+AGG | + | chr8.3:78370134-78370153 | MS.gene020225:intron | 35.0% | |
| TAAGGATGGTGATTTAGTGT+GGG | + | chr8.3:78371083-78371102 | MS.gene020225:CDS | 35.0% | |
| TAATGAGTTCGATCGAAATG+TGG | + | chr8.3:78370368-78370387 | MS.gene020225:intron | 35.0% | |
| TATGTAGAAGACATAGCTGA+GGG | + | chr8.3:78372816-78372835 | MS.gene020225:CDS | 35.0% | |
| TATTCTTTAACAGATCCACC+TGG | - | chr8.3:78372329-78372348 | None:intergenic | 35.0% | |
| TCGTACTATACTGGAATTCT+TGG | + | chr8.3:78371186-78371205 | MS.gene020225:CDS | 35.0% | |
| TGCAATTATGCAACAGTCAT+CGG | - | chr8.3:78371009-78371028 | None:intergenic | 35.0% | |
| TGCTTTGTCATAGCTTGAAA+TGG | + | chr8.3:78372208-78372227 | MS.gene020225:intron | 35.0% | |
| TGGAAAGTGGTTATGTGATT+TGG | + | chr8.3:78370875-78370894 | MS.gene020225:intron | 35.0% | |
| TGGTCTGTGATAGAACATTA+TGG | + | chr8.3:78370388-78370407 | MS.gene020225:intron | 35.0% | |
| TTCAAAGAAACCAGCATAAG+CGG | - | chr8.3:78371612-78371631 | None:intergenic | 35.0% | |
| TTGAAATGGGAAAGAGTCTA+TGG | + | chr8.3:78369984-78370003 | MS.gene020225:intron | 35.0% | |
| TTTAACTCTGTGATTCTTGG+GGG | + | chr8.3:78370479-78370498 | MS.gene020225:intron | 35.0% | |
| ! | ACCTGAAGGTGTAACAAATT+TGG | + | chr8.3:78372677-78372696 | MS.gene020225:CDS | 35.0% |
| ! | ATTTACTTTGAGAATGTGGG+GGG | + | chr8.3:78372567-78372586 | MS.gene020225:CDS | 35.0% |
| ! | CAGGACAAACTCTAAGAATT+TGG | - | chr8.3:78372769-78372788 | None:intergenic | 35.0% |
| ! | CATTTACTTTGAGAATGTGG+GGG | + | chr8.3:78372566-78372585 | MS.gene020225:CDS | 35.0% |
| ! | GACGATAGAAACAGTTTTCT+GGG | - | chr8.3:78369667-78369686 | None:intergenic | 35.0% |
| ! | GTGTCTAAAATTGTGGAATC+TGG | + | chr8.3:78371048-78371067 | MS.gene020225:CDS | 35.0% |
| ! | GTGTGACTAATTTGTGTCAA+TGG | + | chr8.3:78369876-78369895 | MS.gene020225:intron | 35.0% |
| ! | GTTCTTTTCCAAACCAAAAC+AGG | - | chr8.3:78371392-78371411 | None:intergenic | 35.0% |
| !! | AGATGGTGGAAAATAGGTTT+AGG | + | chr8.3:78370208-78370227 | MS.gene020225:intron | 35.0% |
| !! | ATTCTGAAACACTATGTGTC+TGG | + | chr8.3:78369506-78369525 | MS.gene020225:CDS | 35.0% |
| !! | GATCAACTTGTTAGTTGGTT+TGG | + | chr8.3:78369809-78369828 | MS.gene020225:intron | 35.0% |
| !! | GGACAATTTGCTAAATTGCA+TGG | + | chr8.3:78371701-78371720 | MS.gene020225:CDS | 35.0% |
| !! | TATGCTGGTTTCTTTGAAGT+AGG | + | chr8.3:78371614-78371633 | MS.gene020225:CDS | 35.0% |
| !! | TGAAAAGTATTTGAGCTGCA+GGG | - | chr8.3:78371140-78371159 | None:intergenic | 35.0% |
| !! | TTGAAAAGTATTTGAGCTGC+AGG | - | chr8.3:78371141-78371160 | None:intergenic | 35.0% |
| !! | TTGTGTTTTTGTTTGAGCAC+AGG | + | chr8.3:78371572-78371591 | MS.gene020225:intron | 35.0% |
| !!! | TTGTTCAACCTGTTTTGGTT+TGG | + | chr8.3:78371381-78371400 | MS.gene020225:intron | 35.0% |
| AACTGCTGGATATTGGAAAG+TGG | + | chr8.3:78370862-78370881 | MS.gene020225:intron | 40.0% | |
| AAGGATGGTGATTTAGTGTG+GGG | + | chr8.3:78371084-78371103 | MS.gene020225:CDS | 40.0% | |
| ACCTAAGGTAGAAAAGATGG+TGG | + | chr8.3:78370194-78370213 | MS.gene020225:intron | 40.0% | |
| ACTAAGTAGGGTCAACTACA+AGG | - | chr8.3:78370425-78370444 | None:intergenic | 40.0% | |
| AGCACCTAAGGTAGAAAAGA+TGG | + | chr8.3:78370191-78370210 | MS.gene020225:intron | 40.0% | |
| AGTGTGGGGGTTTACTAATT+GGG | + | chr8.3:78371098-78371117 | MS.gene020225:CDS | 40.0% | |
| ATCACACAAGCTACACATCA+AGG | - | chr8.3:78370911-78370930 | None:intergenic | 40.0% | |
| CAAACCTTATCCCACTAAGT+AGG | - | chr8.3:78370438-78370457 | None:intergenic | 40.0% | |
| CACATTTCTGATCAAAGGCA+TGG | + | chr8.3:78371860-78371879 | MS.gene020225:intron | 40.0% | |
| CTACTTAGTGGGATAAGGTT+TGG | + | chr8.3:78370436-78370455 | MS.gene020225:intron | 40.0% | |
| GAAGATAGCAATAGCTTGGA+AGG | + | chr8.3:78370678-78370697 | MS.gene020225:intron | 40.0% | |
| GCACTCACATTTCTGATCAA+AGG | + | chr8.3:78371855-78371874 | MS.gene020225:intron | 40.0% | |
| GCATGAAGATAGCAATAGCT+TGG | + | chr8.3:78370674-78370693 | MS.gene020225:intron | 40.0% | |
| GCTTTGGTTGGCATATTTAG+TGG | + | chr8.3:78372858-78372877 | MS.gene020225:CDS | 40.0% | |
| GTATGTAGAAGACATAGCTG+AGG | + | chr8.3:78372815-78372834 | MS.gene020225:CDS | 40.0% | |
| GTTCCTCTTTCGTACTATAC+TGG | + | chr8.3:78371177-78371196 | MS.gene020225:CDS | 40.0% | |
| TAAATCAGGCTCTTTCCAGA+AGG | + | chr8.3:78372537-78372556 | MS.gene020225:intron | 40.0% | |
| TACATGTGTTATGTCGGTGT+CGG | - | chr8.3:78371893-78371912 | None:intergenic | 40.0% | |
| TAGTGTGGGGGTTTACTAAT+TGG | + | chr8.3:78371097-78371116 | MS.gene020225:CDS | 40.0% | |
| TCACACAAGCTACACATCAA+GGG | - | chr8.3:78370910-78370929 | None:intergenic | 40.0% | |
| TCATGTAGAGAGAAGACTTG+TGG | + | chr8.3:78370239-78370258 | MS.gene020225:intron | 40.0% | |
| TGGTGGAAAATAGGTTTAGG+TGG | + | chr8.3:78370211-78370230 | MS.gene020225:intron | 40.0% | |
| TGTAGTTGACCCTACTTAGT+GGG | + | chr8.3:78370425-78370444 | MS.gene020225:intron | 40.0% | |
| TTCAAGGAACTGCTGGATAT+TGG | + | chr8.3:78370855-78370874 | MS.gene020225:intron | 40.0% | |
| TTGCATGGTTGCTATGTTGT+TGG | + | chr8.3:78371716-78371735 | MS.gene020225:CDS | 40.0% | |
| TTGTAGTTGACCCTACTTAG+TGG | + | chr8.3:78370424-78370443 | MS.gene020225:intron | 40.0% | |
| TTGTATGGAATAGAGTTGGG+TGG | + | chr8.3:78370053-78370072 | MS.gene020225:intron | 40.0% | |
| ! | AATGTACGTCTTTTGCAACC+AGG | + | chr8.3:78372308-78372327 | MS.gene020225:intron | 40.0% |
| ! | CGACGATAGAAACAGTTTTC+TGG | - | chr8.3:78369668-78369687 | None:intergenic | 40.0% |
| ! | CTGTGGTGTGTCTAAAATTG+TGG | + | chr8.3:78371041-78371060 | MS.gene020225:CDS | 40.0% |
| ! | TATAAGCGGATTCGTATGCA+AGG | + | chr8.3:78372711-78372730 | MS.gene020225:CDS | 40.0% |
| ! | TCCACCATCTTTTCTACCTT+AGG | - | chr8.3:78370198-78370217 | None:intergenic | 40.0% |
| ! | TTTAGTATCTGCTGGCTGTT+TGG | + | chr8.3:78371330-78371349 | MS.gene020225:intron | 40.0% |
| ! | TTTTTACGGCGGTAAGACAA+AGG | + | chr8.3:78370027-78370046 | MS.gene020225:intron | 40.0% |
| !! | AAGTGCTGGAAGTAAAGAGA+AGG | + | chr8.3:78371739-78371758 | MS.gene020225:CDS | 40.0% |
| !! | GCATGGATCAACTTGTTAGT+TGG | + | chr8.3:78369804-78369823 | MS.gene020225:intron | 40.0% |
| !! | GCCAAATTTGTTACACCTTC+AGG | - | chr8.3:78372681-78372700 | None:intergenic | 40.0% |
| AAGGAGAGTAGGTCAGATTG+AGG | + | chr8.3:78370272-78370291 | MS.gene020225:intron | 45.0% | |
| AATATGCCAACCAAAGCTGC+AGG | - | chr8.3:78372855-78372874 | None:intergenic | 45.0% | |
| ACACGAGACACACTAGTAAC+CGG | + | chr8.3:78372498-78372517 | MS.gene020225:intron | 45.0% | |
| ACCTTCCCTTCTCTGATATG+AGG | - | chr8.3:78372792-78372811 | None:intergenic | 45.0% | |
| AGGATGGTGATTTAGTGTGG+GGG | + | chr8.3:78371085-78371104 | MS.gene020225:CDS | 45.0% | |
| AGGATTGTTCTAGCCAGAAC+CGG | + | chr8.3:78370553-78370572 | MS.gene020225:intron | 45.0% | |
| ATAGCTGAGGGACTTGAGAA+AGG | + | chr8.3:78372828-78372847 | MS.gene020225:CDS | 45.0% | |
| ATGATGTTGCGTTGGATGTG+TGG | + | chr8.3:78370115-78370134 | MS.gene020225:intron | 45.0% | |
| ATTCAGGAGAACCCGAATTC+CGG | - | chr8.3:78370575-78370594 | None:intergenic | 45.0% | |
| CAACACTGACATGTTGACAC+CGG | - | chr8.3:78371951-78371970 | None:intergenic | 45.0% | |
| CCTGAACATTGGAATACCAG+GGG | - | chr8.3:78370509-78370528 | None:intergenic | 45.0% | |
| GAAGTAGGCTCTCCCAAAAA+AGG | + | chr8.3:78371629-78371648 | MS.gene020225:CDS | 45.0% | |
| GCATAATTGCAGCCAATAGC+TGG | + | chr8.3:78371018-78371037 | MS.gene020225:intron | 45.0% | |
| GCCTGAACATTGGAATACCA+GGG | - | chr8.3:78370510-78370529 | None:intergenic | 45.0% | |
| TATTCCAATGTTCAGGCGAG+AGG | + | chr8.3:78370513-78370532 | MS.gene020225:intron | 45.0% | |
| TCCTGCCTCATATCAGAGAA+GGG | + | chr8.3:78372784-78372803 | MS.gene020225:CDS | 45.0% | |
| TGACCCTACTTAGTGGGATA+AGG | + | chr8.3:78370431-78370450 | MS.gene020225:intron | 45.0% | |
| TGTGAGATCATTCCACACAC+AGG | - | chr8.3:78372642-78372661 | None:intergenic | 45.0% | |
| TTCTAGCCAGAACCGGAATT+CGG | + | chr8.3:78370560-78370579 | MS.gene020225:intron | 45.0% | |
| TTGCGGAAGCTTGAGAGTTA+CGG | - | chr8.3:78369570-78369589 | None:intergenic | 45.0% | |
| ! | GCAAGATGATGATGTTGCGT+TGG | + | chr8.3:78370107-78370126 | MS.gene020225:intron | 45.0% |
| ! | TGCTATGTTGTTGGAAGTGC+TGG | + | chr8.3:78371725-78371744 | MS.gene020225:CDS | 45.0% |
| ! | TTTCTGATCAAAGGCATGGC+TGG | + | chr8.3:78371864-78371883 | MS.gene020225:intron | 45.0% |
| !! | GTACAATTGTTGGTTCCTGC+TGG | - | chr8.3:78372164-78372183 | None:intergenic | 45.0% |
| !! | GTTTTTGTTTCAGCTGCCTC+TGG | + | chr8.3:78371659-78371678 | MS.gene020225:CDS | 45.0% |
| AACTCTGTGATTCTTGGGGG+AGG | + | chr8.3:78370482-78370501 | MS.gene020225:intron | 50.0% | |
| AAGTTGACCAACTGCTCCAG+AGG | - | chr8.3:78371678-78371697 | None:intergenic | 50.0% | |
| ACTCTGTGATTCTTGGGGGA+GGG | + | chr8.3:78370483-78370502 | MS.gene020225:intron | 50.0% | |
| AGAGAATTCTAGCAGCCAGC+AGG | + | chr8.3:78372146-78372165 | MS.gene020225:intron | 50.0% | |
| CCCCTGGTATTCCAATGTTC+AGG | + | chr8.3:78370506-78370525 | MS.gene020225:intron | 50.0% | |
| CGCCTGAACATTGGAATACC+AGG | - | chr8.3:78370511-78370530 | None:intergenic | 50.0% | |
| CTTACCTCTCGCCTGAACAT+TGG | - | chr8.3:78370520-78370539 | None:intergenic | 50.0% | |
| GAGAATTGGGGTAGCACCTA+AGG | + | chr8.3:78370179-78370198 | MS.gene020225:intron | 50.0% | |
| GCCTCATATCAGAGAAGGGA+AGG | + | chr8.3:78372788-78372807 | MS.gene020225:CDS | 50.0% | |
| GGAGCAGTTGGTCAACTTGT+TGG | + | chr8.3:78371680-78371699 | MS.gene020225:CDS | 50.0% | |
| GTAACTCTCAAGCTTCCGCA+AGG | + | chr8.3:78369569-78369588 | MS.gene020225:CDS | 50.0% | |
| GTCCTGCCTCATATCAGAGA+AGG | + | chr8.3:78372783-78372802 | MS.gene020225:CDS | 50.0% | |
| TCCCTTCTCTGATATGAGGC+AGG | - | chr8.3:78372788-78372807 | None:intergenic | 50.0% | |
| TCTAGCCAGAACCGGAATTC+GGG | + | chr8.3:78370561-78370580 | MS.gene020225:intron | 50.0% | |
| TGAGAAAGGTCCTGCAGCTT+TGG | + | chr8.3:78372842-78372861 | MS.gene020225:CDS | 50.0% | |
| TGTTTGAGCACAGGTATGCC+AGG | + | chr8.3:78371581-78371600 | MS.gene020225:intron | 50.0% | |
| ! | AAAGGTCCTGCAGCTTTGGT+TGG | + | chr8.3:78372846-78372865 | MS.gene020225:CDS | 50.0% |
| ! | GTACGTCTTTTGCAACCAGG+TGG | + | chr8.3:78372311-78372330 | MS.gene020225:intron | 50.0% |
| CCAGCATAAGCGGTCATTCC+TGG | - | chr8.3:78371602-78371621 | None:intergenic | 55.0% | |
| CCAGGAATGACCGCTTATGC+TGG | + | chr8.3:78371599-78371618 | MS.gene020225:CDS | 55.0% | |
| CGAGACACACTAGTAACCGG+TGG | + | chr8.3:78372501-78372520 | MS.gene020225:intron | 55.0% | |
| GACACACCACAGCCAGCTAT+TGG | - | chr8.3:78371033-78371052 | None:intergenic | 55.0% | |
| GAGAACCCGAATTCCGGTTC+TGG | - | chr8.3:78370569-78370588 | None:intergenic | 55.0% | |
| TTGCAGCCAATAGCTGGCTG+TGG | + | chr8.3:78371024-78371043 | MS.gene020225:intron | 55.0% | |
| CACACACAGGTATGCGCCCA+TGG | - | chr8.3:78372629-78372648 | None:intergenic | 60.0% | |
| CATGGGCGCATACCTGTGTG+TGG | + | chr8.3:78372627-78372646 | MS.gene020225:CDS | 60.0% | |
| !! | TCAGCTGCCTCTGGAGCAGT+TGG | + | chr8.3:78371668-78371687 | MS.gene020225:CDS | 60.0% |
| GATTCTTGGGGGAGGGCCCC+TGG | + | chr8.3:78370490-78370509 | MS.gene020225:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 78369479 | 78372923 | 78369479 | ID=MS.gene020225 |
| chr8.3 | mRNA | 78369479 | 78372923 | 78369479 | ID=MS.gene020225.t1;Parent=MS.gene020225 |
| chr8.3 | exon | 78369479 | 78369706 | 78369479 | ID=MS.gene020225.t1.exon1;Parent=MS.gene020225.t1 |
| chr8.3 | CDS | 78369479 | 78369706 | 78369479 | ID=cds.MS.gene020225.t1;Parent=MS.gene020225.t1 |
| chr8.3 | exon | 78371030 | 78371207 | 78371030 | ID=MS.gene020225.t1.exon2;Parent=MS.gene020225.t1 |
| chr8.3 | CDS | 78371030 | 78371207 | 78371030 | ID=cds.MS.gene020225.t1;Parent=MS.gene020225.t1 |
| chr8.3 | exon | 78371594 | 78371760 | 78371594 | ID=MS.gene020225.t1.exon3;Parent=MS.gene020225.t1 |
| chr8.3 | CDS | 78371594 | 78371760 | 78371594 | ID=cds.MS.gene020225.t1;Parent=MS.gene020225.t1 |
| chr8.3 | exon | 78372330 | 78372412 | 78372330 | ID=MS.gene020225.t1.exon4;Parent=MS.gene020225.t1 |
| chr8.3 | CDS | 78372330 | 78372412 | 78372330 | ID=cds.MS.gene020225.t1;Parent=MS.gene020225.t1 |
| chr8.3 | exon | 78372545 | 78372923 | 78372545 | ID=MS.gene020225.t1.exon5;Parent=MS.gene020225.t1 |
| chr8.3 | CDS | 78372545 | 78372923 | 78372545 | ID=cds.MS.gene020225.t1;Parent=MS.gene020225.t1 |
| Gene Sequence |
| Protein sequence |
