Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39314.t1 | ACJ85436.1 | 93.8 | 289 | 8 | 1 | 1 | 279 | 56 | 344 | 2.00E-151 | 545 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39314.t1 | Q39173 | 69.4 | 291 | 77 | 3 | 1 | 279 | 53 | 343 | 1.3e-114 | 414.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39314.t1 | B7FL02 | 93.8 | 289 | 8 | 1 | 1 | 279 | 56 | 344 | 1.4e-151 | 545.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene39314 | 0.876827 | 1.02E-68 | -1.69E-46 |
| MS.gene04918 | MS.gene39314 | 0.823455 | 1.37E-53 | -1.69E-46 |
| MS.gene04920 | MS.gene39314 | 0.812601 | 3.90E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene39314 | 0.830334 | 3.11E-55 | -1.69E-46 |
| MS.gene049283 | MS.gene39314 | 0.814124 | 1.81E-51 | -1.69E-46 |
| MS.gene049368 | MS.gene39314 | 0.838396 | 2.95E-57 | -1.69E-46 |
| MS.gene049499 | MS.gene39314 | 0.858229 | 9.51E-63 | -1.69E-46 |
| MS.gene049652 | MS.gene39314 | 0.80543 | 1.34E-49 | -1.69E-46 |
| MS.gene049801 | MS.gene39314 | 0.806722 | 7.17E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene39314 | 0.83406 | 3.73E-56 | -1.69E-46 |
| MS.gene050026 | MS.gene39314 | 0.80149 | 8.79E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene39314 | 0.80932 | 2.01E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene39314 | 0.816353 | 5.78E-52 | -1.69E-46 |
| MS.gene050941 | MS.gene39314 | 0.800246 | 1.58E-48 | -1.69E-46 |
| MS.gene051003 | MS.gene39314 | 0.811706 | 6.12E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene39314 | 0.818669 | 1.74E-52 | -1.69E-46 |
| MS.gene051332 | MS.gene39314 | 0.817312 | 3.52E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene39314 | 0.803194 | 3.92E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene39314 | 0.801866 | 7.35E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene39314 | 0.812595 | 3.92E-51 | -1.69E-46 |
| MS.gene051800 | MS.gene39314 | 0.806631 | 7.49E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene39314 | 0.808928 | 2.43E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene39314 | 0.842064 | 3.25E-58 | -1.69E-46 |
| MS.gene052516 | MS.gene39314 | 0.812436 | 4.24E-51 | -1.69E-46 |
| MS.gene052518 | MS.gene39314 | 0.844716 | 6.36E-59 | -1.69E-46 |
| MS.gene052519 | MS.gene39314 | 0.813716 | 2.22E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene39314 | 0.815842 | 7.51E-52 | -1.69E-46 |
| MS.gene052773 | MS.gene39314 | 0.809499 | 1.84E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene39314 | 0.81601 | 6.89E-52 | -1.69E-46 |
| MS.gene053079 | MS.gene39314 | 0.811956 | 5.40E-51 | -1.69E-46 |
| MS.gene05315 | MS.gene39314 | 0.802146 | 6.44E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene39314 | 0.809112 | 2.22E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene39314 | 0.800382 | 1.48E-48 | -1.69E-46 |
| MS.gene05423 | MS.gene39314 | 0.814943 | 1.19E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene39314 | 0.839273 | 1.75E-57 | -1.69E-46 |
| MS.gene05458 | MS.gene39314 | 0.825111 | 5.60E-54 | -1.69E-46 |
| MS.gene054641 | MS.gene39314 | 0.817568 | 3.08E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene39314 | 0.821772 | 3.38E-53 | -1.69E-46 |
| MS.gene054775 | MS.gene39314 | 0.805063 | 1.60E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene39314 | 0.80514 | 1.54E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene39314 | 0.828584 | 8.29E-55 | -1.69E-46 |
| MS.gene055513 | MS.gene39314 | 0.845422 | 4.10E-59 | -1.69E-46 |
| MS.gene055818 | MS.gene39314 | 0.815628 | 8.39E-52 | -1.69E-46 |
| MS.gene055864 | MS.gene39314 | 0.826878 | 2.13E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene39314 | 0.813994 | 1.93E-51 | -1.69E-46 |
| MS.gene056045 | MS.gene39314 | 0.822195 | 2.70E-53 | -1.69E-46 |
| MS.gene056050 | MS.gene39314 | 0.801752 | 7.77E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene39314 | 0.8406 | 7.89E-58 | -1.69E-46 |
| MS.gene056215 | MS.gene39314 | 0.813467 | 2.52E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene39314 | 0.834077 | 3.69E-56 | -1.69E-46 |
| MS.gene056390 | MS.gene39314 | 0.800552 | 1.37E-48 | -1.69E-46 |
| MS.gene056595 | MS.gene39314 | 0.803335 | 3.66E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene39314 | 0.842097 | 3.18E-58 | -1.69E-46 |
| MS.gene05686 | MS.gene39314 | 0.820363 | 7.14E-53 | -1.69E-46 |
| MS.gene05690 | MS.gene39314 | 0.831621 | 1.50E-55 | -1.69E-46 |
| MS.gene057034 | MS.gene39314 | 0.812367 | 4.39E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene39314 | 0.821417 | 4.08E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene39314 | 0.810087 | 1.37E-50 | -1.69E-46 |
| MS.gene057598 | MS.gene39314 | 0.833215 | 6.06E-56 | -1.69E-46 |
| MS.gene057855 | MS.gene39314 | 0.808409 | 3.14E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene39314 | 0.802913 | 4.48E-49 | -1.69E-46 |
| MS.gene058009 | MS.gene39314 | 0.827162 | 1.82E-54 | -1.69E-46 |
| MS.gene058010 | MS.gene39314 | 0.820251 | 7.57E-53 | -1.69E-46 |
| MS.gene058159 | MS.gene39314 | 0.816142 | 6.44E-52 | -1.69E-46 |
| MS.gene058279 | MS.gene39314 | 0.800727 | 1.26E-48 | -1.69E-46 |
| MS.gene05847 | MS.gene39314 | 0.805276 | 1.44E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene39314 | 0.81313 | 2.99E-51 | -1.69E-46 |
| MS.gene058783 | MS.gene39314 | 0.810916 | 9.09E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene39314 | 0.81255 | 4.01E-51 | -1.69E-46 |
| MS.gene05897 | MS.gene39314 | 0.802595 | 5.21E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene39314 | 0.802812 | 4.70E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene39314 | 0.803513 | 3.36E-49 | -1.69E-46 |
| MS.gene059227 | MS.gene39314 | 0.801976 | 6.98E-49 | -1.69E-46 |
| MS.gene059272 | MS.gene39314 | 0.802128 | 6.50E-49 | -1.69E-46 |
| MS.gene059283 | MS.gene39314 | 0.805383 | 1.37E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene39314 | 0.834291 | 3.26E-56 | -1.69E-46 |
| MS.gene05952 | MS.gene39314 | 0.805735 | 1.16E-49 | -1.69E-46 |
| MS.gene059570 | MS.gene39314 | 0.823982 | 1.03E-53 | -1.69E-46 |
| MS.gene059625 | MS.gene39314 | 0.839559 | 1.47E-57 | -1.69E-46 |
| MS.gene059842 | MS.gene39314 | 0.802561 | 5.29E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene39314 | -0.811934 | 5.46E-51 | -1.69E-46 |
| MS.gene059952 | MS.gene39314 | 0.81677 | 4.66E-52 | -1.69E-46 |
| MS.gene060011 | MS.gene39314 | 0.801116 | 1.05E-48 | -1.69E-46 |
| MS.gene060527 | MS.gene39314 | 0.813581 | 2.38E-51 | -1.69E-46 |
| MS.gene060777 | MS.gene39314 | 0.84148 | 4.63E-58 | -1.69E-46 |
| MS.gene060932 | MS.gene39314 | 0.824447 | 8.03E-54 | -1.69E-46 |
| MS.gene060933 | MS.gene39314 | 0.807423 | 5.09E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene39314 | 0.822465 | 2.34E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene39314 | 0.836778 | 7.66E-57 | -1.69E-46 |
| MS.gene061100 | MS.gene39314 | 0.856702 | 2.69E-62 | -1.69E-46 |
| MS.gene061160 | MS.gene39314 | 0.843864 | 1.08E-58 | -1.69E-46 |
| MS.gene061188 | MS.gene39314 | 0.809222 | 2.10E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39314 | MS.gene41778 | PPI |
| MS.gene39314 | MS.gene022735 | PPI |
| MS.gene39314 | MS.gene022736 | PPI |
| MS.gene39314 | MS.gene020227 | PPI |
| MS.gene54434 | MS.gene39314 | PPI |
| MS.gene020239 | MS.gene39314 | PPI |
| MS.gene39314 | MS.gene069341 | PPI |
| MS.gene08162 | MS.gene39314 | PPI |
| MS.gene39314 | MS.gene54433 | PPI |
| MS.gene39314 | MS.gene45375 | PPI |
| MS.gene39315 | MS.gene39314 | PPI |
| MS.gene022721 | MS.gene39314 | PPI |
| MS.gene54433 | MS.gene39314 | PPI |
| MS.gene97874 | MS.gene39314 | PPI |
| MS.gene042467 | MS.gene39314 | PPI |
| MS.gene020077 | MS.gene39314 | PPI |
| MS.gene069341 | MS.gene39314 | PPI |
| MS.gene39314 | MS.gene022738 | PPI |
| MS.gene020033 | MS.gene39314 | PPI |
| MS.gene020225 | MS.gene39314 | PPI |
| MS.gene020076 | MS.gene39314 | PPI |
| MS.gene39327 | MS.gene39314 | PPI |
| MS.gene022737 | MS.gene39314 | PPI |
| MS.gene39314 | MS.gene39313 | PPI |
| MS.gene39314 | MS.gene067859 | PPI |
| MS.gene39312 | MS.gene39314 | PPI |
| MS.gene022722 | MS.gene39314 | PPI |
| MS.gene39314 | MS.gene022721 | PPI |
| MS.gene020226 | MS.gene39314 | PPI |
| MS.gene39326 | MS.gene39314 | PPI |
| MS.gene020228 | MS.gene39314 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39314.t1 | MTR_8g010000 | 91.756 | 279 | 8 | 1 | 1 | 279 | 56 | 319 | 0.0 | 516 |
| MS.gene39314.t1 | MTR_8g010030 | 83.045 | 289 | 39 | 1 | 1 | 279 | 56 | 344 | 4.41e-179 | 497 |
| MS.gene39314.t1 | MTR_8g010020 | 89.179 | 268 | 19 | 1 | 22 | 279 | 45 | 312 | 9.97e-178 | 492 |
| MS.gene39314.t1 | MTR_8g009820 | 83.395 | 271 | 35 | 1 | 19 | 279 | 132 | 402 | 7.99e-166 | 466 |
| MS.gene39314.t1 | MTR_8g009980 | 74.483 | 290 | 63 | 2 | 1 | 279 | 55 | 344 | 2.14e-161 | 452 |
| MS.gene39314.t1 | MTR_8g009840 | 76.056 | 284 | 54 | 4 | 1 | 273 | 56 | 336 | 1.75e-154 | 442 |
| MS.gene39314.t1 | MTR_8g009830 | 73.448 | 290 | 63 | 4 | 1 | 279 | 56 | 342 | 8.83e-154 | 432 |
| MS.gene39314.t1 | MTR_4g082970 | 66.667 | 273 | 81 | 1 | 17 | 279 | 78 | 350 | 2.62e-130 | 374 |
| MS.gene39314.t1 | MTR_7g406860 | 57.931 | 290 | 110 | 3 | 1 | 279 | 58 | 346 | 9.81e-115 | 334 |
| MS.gene39314.t1 | MTR_0011s0280 | 45.756 | 271 | 137 | 1 | 19 | 279 | 76 | 346 | 3.18e-85 | 259 |
| MS.gene39314.t1 | MTR_8g007325 | 80.952 | 147 | 18 | 1 | 18 | 154 | 72 | 218 | 8.98e-81 | 243 |
| MS.gene39314.t1 | MTR_2g088190 | 42.143 | 280 | 140 | 6 | 17 | 276 | 70 | 347 | 4.15e-67 | 213 |
| MS.gene39314.t1 | MTR_2g088220 | 44.030 | 268 | 136 | 4 | 23 | 276 | 81 | 348 | 1.77e-63 | 203 |
| MS.gene39314.t1 | MTR_2g088200 | 40.143 | 279 | 148 | 5 | 17 | 276 | 70 | 348 | 2.41e-58 | 190 |
| MS.gene39314.t1 | MTR_5g095030 | 55.469 | 128 | 57 | 0 | 150 | 277 | 9 | 136 | 6.59e-48 | 156 |
| MS.gene39314.t1 | MTR_4g086410 | 34.928 | 209 | 118 | 5 | 84 | 276 | 416 | 622 | 1.63e-23 | 100 |
| MS.gene39314.t1 | MTR_4g086400 | 33.649 | 211 | 118 | 6 | 84 | 276 | 276 | 482 | 6.47e-23 | 98.2 |
| MS.gene39314.t1 | MTR_4g086400 | 33.649 | 211 | 118 | 6 | 84 | 276 | 416 | 622 | 7.95e-23 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39314.t1 | AT5G16990 | 69.416 | 291 | 77 | 3 | 1 | 279 | 53 | 343 | 1.53e-147 | 417 |
| MS.gene39314.t1 | AT5G16970 | 68.151 | 292 | 80 | 3 | 1 | 279 | 54 | 345 | 3.21e-146 | 414 |
| MS.gene39314.t1 | AT5G17000 | 68.151 | 292 | 80 | 3 | 1 | 279 | 54 | 345 | 2.89e-145 | 411 |
| MS.gene39314.t1 | AT3G03080 | 66.096 | 292 | 85 | 3 | 1 | 279 | 60 | 350 | 1.21e-140 | 400 |
| MS.gene39314.t1 | AT1G26320 | 67.123 | 292 | 83 | 3 | 1 | 279 | 60 | 351 | 6.67e-138 | 393 |
| MS.gene39314.t1 | AT1G26320 | 67.596 | 287 | 85 | 3 | 1 | 279 | 60 | 346 | 7.74e-137 | 390 |
| MS.gene39314.t1 | AT5G37980 | 63.918 | 291 | 93 | 3 | 1 | 279 | 63 | 353 | 6.89e-136 | 388 |
| MS.gene39314.t1 | AT5G16960 | 62.759 | 290 | 95 | 3 | 1 | 277 | 55 | 344 | 2.50e-133 | 381 |
| MS.gene39314.t1 | AT5G16960 | 62.759 | 290 | 95 | 3 | 1 | 277 | 55 | 344 | 2.50e-133 | 381 |
| MS.gene39314.t1 | AT5G37940 | 61.986 | 292 | 97 | 3 | 2 | 279 | 62 | 353 | 3.36e-132 | 379 |
| MS.gene39314.t1 | AT5G38000 | 61.301 | 292 | 97 | 4 | 2 | 278 | 62 | 352 | 9.80e-129 | 370 |
| MS.gene39314.t1 | AT5G38000 | 59.582 | 287 | 97 | 5 | 2 | 270 | 62 | 347 | 1.97e-121 | 351 |
| MS.gene39314.t1 | AT3G59845 | 60.690 | 290 | 100 | 4 | 1 | 277 | 58 | 346 | 1.39e-120 | 348 |
| MS.gene39314.t1 | AT5G16980 | 72.247 | 227 | 53 | 1 | 63 | 279 | 13 | 239 | 5.23e-120 | 343 |
| MS.gene39314.t1 | AT5G16980 | 72.247 | 227 | 53 | 1 | 63 | 279 | 13 | 239 | 5.23e-120 | 343 |
| MS.gene39314.t1 | AT5G16980 | 72.247 | 227 | 53 | 1 | 63 | 279 | 79 | 305 | 1.83e-119 | 344 |
| MS.gene39314.t1 | AT5G38000 | 57.534 | 292 | 89 | 5 | 2 | 278 | 62 | 333 | 1.27e-114 | 333 |
| MS.gene39314.t1 | AT3G59845 | 65.306 | 245 | 73 | 3 | 44 | 277 | 1 | 244 | 2.05e-109 | 317 |
| MS.gene39314.t1 | AT1G65560 | 55.631 | 293 | 115 | 4 | 1 | 279 | 59 | 350 | 4.96e-107 | 314 |
| MS.gene39314.t1 | AT1G65560 | 57.196 | 271 | 102 | 3 | 23 | 279 | 4 | 274 | 1.64e-105 | 308 |
| MS.gene39314.t1 | AT5G17000 | 63.473 | 167 | 48 | 3 | 1 | 154 | 54 | 220 | 2.44e-70 | 217 |
| MS.gene39314.t1 | AT1G49670 | 33.649 | 211 | 118 | 6 | 84 | 276 | 412 | 618 | 1.96e-21 | 94.4 |
| MS.gene39314.t1 | AT1G49670 | 33.659 | 205 | 114 | 6 | 90 | 276 | 441 | 641 | 5.21e-20 | 90.1 |
| MS.gene39314.t1 | AT5G37960 | 51.948 | 77 | 37 | 0 | 198 | 274 | 25 | 101 | 8.57e-20 | 82.8 |
Find 63 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTCTTCTTTGTAGTTAA+TGG | 0.122574 | 8.2:-81147905 | None:intergenic |
| GATCTGTTGAAGAATAAATT+TGG | 0.232879 | 8.2:+81147871 | MS.gene39314:CDS |
| CGTGGATTGATAGATGCTTT+TGG | 0.268838 | 8.2:-81145899 | None:intergenic |
| TCCTACTATACTGGAGTTCT+AGG | 0.294178 | 8.2:+81146700 | MS.gene39314:CDS |
| AACCATGCAATTTGGCGAAT+TGG | 0.308933 | 8.2:-81147264 | None:intergenic |
| TTTCAGCCGTTAACTGGTTA+TGG | 0.313356 | 8.2:+81146538 | MS.gene39314:intron |
| AATATGCCAACCAAGGCTTC+AGG | 0.325576 | 8.2:-81148393 | None:intergenic |
| AAGTAAACATCAATGCCTTC+TGG | 0.327094 | 8.2:-81148093 | None:intergenic |
| ATCTGAACACAAAGATTATA+AGG | 0.335851 | 8.2:+81146579 | MS.gene39314:CDS |
| TCGTAATTTCAGCCGTTAAC+TGG | 0.342310 | 8.2:+81146532 | MS.gene39314:intron |
| TCATCTATACAGCAAATTCT+TGG | 0.348074 | 8.2:+81148296 | MS.gene39314:CDS |
| GGTGCAGTTGGTCAACTTGT+TGG | 0.392209 | 8.2:+81147241 | MS.gene39314:CDS |
| GTTCCTCTTTCCTACTATAC+TGG | 0.394850 | 8.2:+81146691 | MS.gene39314:CDS |
| AACGTAGCAACCATGCAATT+TGG | 0.396664 | 8.2:-81147272 | None:intergenic |
| CCAGCATAAGCAGTCATTCC+TGG | 0.404051 | 8.2:-81147160 | None:intergenic |
| GACACACCATAACCAGTTAA+CGG | 0.422138 | 8.2:-81146544 | None:intergenic |
| GCCTTGGTTGGCATATTTAG+TGG | 0.423385 | 8.2:+81148399 | MS.gene39314:CDS |
| AGAAGGGAAGGTTGTGTATG+TGG | 0.430397 | 8.2:+81148341 | MS.gene39314:CDS |
| GCTGTATAGATGATAGTAAT+CGG | 0.440906 | 8.2:-81148286 | None:intergenic |
| AGCCATAAACTTACAGATTG+AGG | 0.442715 | 8.2:-81145932 | None:intergenic |
| TCTTTGAGTGCAGGTATGCC+AGG | 0.460876 | 8.2:+81147142 | MS.gene39314:intron |
| ATATGCCAACCAAGGCTTCA+GGG | 0.469173 | 8.2:-81148392 | None:intergenic |
| TACAATCTTACTCAACTTGA+AGG | 0.471592 | 8.2:+81148204 | MS.gene39314:CDS |
| TATAAGCGGGTTCGTTTGCA+AGG | 0.473653 | 8.2:+81148252 | MS.gene39314:CDS |
| TATGCTGGTTTCTTTGAAGT+AGG | 0.475286 | 8.2:+81147175 | MS.gene39314:CDS |
| TGAGAAAGGCCCTGAAGCCT+TGG | 0.477909 | 8.2:+81148383 | MS.gene39314:CDS |
| TCAGCTGCCTCTGGTGCAGT+TGG | 0.486180 | 8.2:+81147229 | MS.gene39314:CDS |
| TTGAAATGTATTTGAGCCGC+AGG | 0.496347 | 8.2:-81146652 | None:intergenic |
| ACCTAGAACTCCAGTATAGT+AGG | 0.498495 | 8.2:-81146701 | None:intergenic |
| GAAGTAGGCGCTACCAAGAA+AGG | 0.498938 | 8.2:+81147190 | MS.gene39314:CDS |
| CCAGGAATGACTGCTTATGC+TGG | 0.502390 | 8.2:+81147160 | MS.gene39314:CDS |
| AGCACATATCGTATATAAGC+GGG | 0.502996 | 8.2:+81148239 | MS.gene39314:CDS |
| ACCTCAATGCAACATTGAAA+AGG | 0.521080 | 8.2:+81147929 | MS.gene39314:CDS |
| TAAGGAAGGTGATATAGTGT+GGG | 0.522542 | 8.2:+81146597 | MS.gene39314:CDS |
| ATAAGGAAGGTGATATAGTG+TGG | 0.533080 | 8.2:+81146596 | MS.gene39314:CDS |
| ATAGCTGAGGGTCTTGAGAA+AGG | 0.540813 | 8.2:+81148369 | MS.gene39314:CDS |
| GTTTACTTTGAGAACGTTGG+AGG | 0.547671 | 8.2:+81148108 | MS.gene39314:CDS |
| ACTTACAGATTGAGGAACAT+AGG | 0.548541 | 8.2:-81145924 | None:intergenic |
| TCCCTTCTCTGATACGAGGC+AGG | 0.554222 | 8.2:-81148326 | None:intergenic |
| GAACACAAAGATTATAAGGA+AGG | 0.565010 | 8.2:+81146583 | MS.gene39314:CDS |
| ACTCCAGTATAGTAGGAAAG+AGG | 0.571694 | 8.2:-81146694 | None:intergenic |
| AAAGGCCCTGAAGCCTTGGT+TGG | 0.572741 | 8.2:+81148387 | MS.gene39314:CDS |
| GATGTTTACTTTGAGAACGT+TGG | 0.576272 | 8.2:+81148105 | MS.gene39314:CDS |
| GTCCTGCCTCGTATCAGAGA+AGG | 0.579424 | 8.2:+81148324 | MS.gene39314:CDS |
| GCCTCGTATCAGAGAAGGGA+AGG | 0.580164 | 8.2:+81148329 | MS.gene39314:CDS |
| GGCCAATTCGCCAAATTGCA+TGG | 0.580690 | 8.2:+81147262 | MS.gene39314:CDS |
| GCCACTAAATATGCCAACCA+AGG | 0.582332 | 8.2:-81148400 | None:intergenic |
| TTATGGTGTGTCTAAAGTTG+TGG | 0.587703 | 8.2:+81146555 | MS.gene39314:CDS |
| TTAATTAGGCACTTTCCAGA+AGG | 0.598364 | 8.2:+81148078 | MS.gene39314:intron |
| AAGGAAGGTGATATAGTGTG+GGG | 0.603651 | 8.2:+81146598 | MS.gene39314:CDS |
| TCCTGCCTCGTATCAGAGAA+GGG | 0.605584 | 8.2:+81148325 | MS.gene39314:CDS |
| AAGTTGACCAACTGCACCAG+AGG | 0.637825 | 8.2:-81147236 | None:intergenic |
| TGAAATGTATTTGAGCCGCA+GGG | 0.641592 | 8.2:-81146651 | None:intergenic |
| CTCTTGAATATGAAAGTGCA+TGG | 0.642082 | 8.2:+81148150 | MS.gene39314:CDS |
| TAGCACATATCGTATATAAG+CGG | 0.655907 | 8.2:+81148238 | MS.gene39314:CDS |
| AGGAAGGTGATATAGTGTGG+GGG | 0.659217 | 8.2:+81146599 | MS.gene39314:CDS |
| CATGGTCGCATACCTGTGTG+TGG | 0.678710 | 8.2:+81148168 | MS.gene39314:CDS |
| TGTGAGATCATTCCACACAC+AGG | 0.692179 | 8.2:-81148180 | None:intergenic |
| ACCTTCCCTTCTCTGATACG+AGG | 0.702118 | 8.2:-81148330 | None:intergenic |
| GATTGAGGAACATAGGCACG+TGG | 0.744035 | 8.2:-81145917 | None:intergenic |
| GTATGTGGAAGACATAGCTG+AGG | 0.744288 | 8.2:+81148356 | MS.gene39314:CDS |
| TATGTGGAAGACATAGCTGA+GGG | 0.752621 | 8.2:+81148357 | MS.gene39314:CDS |
| AGAGTACAGCTTGATCCCTG+CGG | 0.754975 | 8.2:+81146636 | MS.gene39314:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATTGAAAAATATTAATAT+AGG | - | chr8.2:81146906-81146925 | None:intergenic | 10.0% |
| !! | TTGAAATTTGTAATAAAATT+AGG | - | chr8.2:81147610-81147629 | None:intergenic | 10.0% |
| !! | AGACATATATATTTAAGTAA+AGG | - | chr8.2:81147837-81147856 | None:intergenic | 15.0% |
| !! | ATATAAAAAACTCTACTTTA+AGG | - | chr8.2:81145988-81146007 | None:intergenic | 15.0% |
| !! | GATATCAATTTATGTTAATT+AGG | + | chr8.2:81148064-81148083 | MS.gene39314:intron | 15.0% |
| !!! | AGAGTTTTTTATATGTAAAT+TGG | + | chr8.2:81145994-81146013 | MS.gene39314:intron | 15.0% |
| !! | AAAAACATCATAATAACTTG+AGG | - | chr8.2:81146776-81146795 | None:intergenic | 20.0% |
| !! | AATTTGACAAATACTGAAAA+GGG | - | chr8.2:81145962-81145981 | None:intergenic | 20.0% |
| !! | ACATGTGTTAAAGAAAAAAA+AGG | + | chr8.2:81146275-81146294 | MS.gene39314:intron | 20.0% |
| !! | CATAGAAAATTATGTTTCTT+TGG | + | chr8.2:81146366-81146385 | MS.gene39314:intron | 20.0% |
| !! | CATGTGTTAAAGAAAAAAAA+GGG | + | chr8.2:81146276-81146295 | MS.gene39314:intron | 20.0% |
| !! | TAATTTGACAAATACTGAAA+AGG | - | chr8.2:81145963-81145982 | None:intergenic | 20.0% |
| !! | TATCATCAGTTTCAAATAAA+AGG | - | chr8.2:81146968-81146987 | None:intergenic | 20.0% |
| !!! | AAGAATAATTTGCTAAGAAA+TGG | - | chr8.2:81146082-81146101 | None:intergenic | 20.0% |
| !!! | TAGGTTTACAATTTTGATTT+TGG | + | chr8.2:81146050-81146069 | MS.gene39314:intron | 20.0% |
| !!! | TATTTTTGTTGAGAATTTGA+AGG | + | chr8.2:81146397-81146416 | MS.gene39314:intron | 20.0% |
| !!! | TTGAACTACTCTTAATTTTT+AGG | + | chr8.2:81147704-81147723 | MS.gene39314:intron | 20.0% |
| ! | AAGAAAAACACATGTCAAAA+AGG | - | chr8.2:81147126-81147145 | None:intergenic | 25.0% |
| ! | AGAAAAGATTATAAGAGAAG+CGG | - | chr8.2:81147017-81147036 | None:intergenic | 25.0% |
| ! | AGAAAATTATGTTTCTTTGG+TGG | + | chr8.2:81146369-81146388 | MS.gene39314:intron | 25.0% |
| ! | ATATTTAGTGGCAAAAATGT+TGG | + | chr8.2:81148411-81148430 | MS.gene39314:CDS | 25.0% |
| ! | ATCTACAATATCAACAATCA+AGG | + | chr8.2:81147525-81147544 | MS.gene39314:intron | 25.0% |
| ! | ATCTGAACACAAAGATTATA+AGG | + | chr8.2:81146579-81146598 | MS.gene39314:CDS | 25.0% |
| ! | GAAAATTATGTTTCTTTGGT+GGG | + | chr8.2:81146370-81146389 | MS.gene39314:intron | 25.0% |
| ! | GATCTGTTGAAGAATAAATT+TGG | + | chr8.2:81147871-81147890 | MS.gene39314:CDS | 25.0% |
| ! | TACTAGTTCAATATGCTTAT+TGG | + | chr8.2:81147982-81148001 | MS.gene39314:intron | 25.0% |
| ! | TCAATGAAAAGACACAAAAA+TGG | - | chr8.2:81147792-81147811 | None:intergenic | 25.0% |
| ! | TGATTGTTGATATTGTAGAT+AGG | - | chr8.2:81147525-81147544 | None:intergenic | 25.0% |
| ! | TGTATGATTATAGAGAAGAA+TGG | + | chr8.2:81146725-81146744 | MS.gene39314:intron | 25.0% |
| ! | TTCTAGTCAATTTACAAACT+CGG | + | chr8.2:81146210-81146229 | MS.gene39314:intron | 25.0% |
| !! | CTTCTCTTATAATCTTTTCT+TGG | + | chr8.2:81147017-81147036 | MS.gene39314:intron | 25.0% |
| AAAAACATTCTCTCCTTTCT+TGG | - | chr8.2:81147206-81147225 | None:intergenic | 30.0% | |
| AAACAACTCTTTCACACAAT+AGG | - | chr8.2:81146864-81146883 | None:intergenic | 30.0% | |
| AAATTGAAGAGAATTGTACC+AGG | + | chr8.2:81147659-81147678 | MS.gene39314:intron | 30.0% | |
| ACACAAATTAGTCACCAAAA+TGG | - | chr8.2:81146255-81146274 | None:intergenic | 30.0% | |
| ATTTACAAACTCGGATTCTT+TGG | + | chr8.2:81146219-81146238 | MS.gene39314:intron | 30.0% | |
| CAACTGTGCAAATATTATTC+TGG | - | chr8.2:81147687-81147706 | None:intergenic | 30.0% | |
| CTTGTTCAACAAAGGATATA+CGG | + | chr8.2:81146932-81146951 | MS.gene39314:intron | 30.0% | |
| GAACACAAAGATTATAAGGA+AGG | + | chr8.2:81146583-81146602 | MS.gene39314:CDS | 30.0% | |
| GCTGTATAGATGATAGTAAT+CGG | - | chr8.2:81148289-81148308 | None:intergenic | 30.0% | |
| TACAATCTTACTCAACTTGA+AGG | + | chr8.2:81148204-81148223 | MS.gene39314:CDS | 30.0% | |
| TAGCACATATCGTATATAAG+CGG | + | chr8.2:81148238-81148257 | MS.gene39314:CDS | 30.0% | |
| TCATCTATACAGCAAATTCT+TGG | + | chr8.2:81148296-81148315 | MS.gene39314:CDS | 30.0% | |
| TGGTACAATTCTCTTCAATT+TGG | - | chr8.2:81147660-81147679 | None:intergenic | 30.0% | |
| TGTCTTATCTTGTTCAACAA+AGG | + | chr8.2:81146924-81146943 | MS.gene39314:intron | 30.0% | |
| TTCCTCAATCTGTAAGTTTA+TGG | + | chr8.2:81145930-81145949 | MS.gene39314:intron | 30.0% | |
| TTGCTCTTCTTTGTAGTTAA+TGG | - | chr8.2:81147908-81147927 | None:intergenic | 30.0% | |
| TTGTTTAGTATCGTTACAGA+CGG | + | chr8.2:81146818-81146837 | MS.gene39314:intron | 30.0% | |
| ! | AAATTGGTCTCTTCATCATA+TGG | + | chr8.2:81146010-81146029 | MS.gene39314:intron | 30.0% |
| ! | AAGACACAAAAATGGATTTC+TGG | - | chr8.2:81147784-81147803 | None:intergenic | 30.0% |
| ! | AATTGGTCTCTTCATCATAT+GGG | + | chr8.2:81146011-81146030 | MS.gene39314:intron | 30.0% |
| ! | AGACACAAAAATGGATTTCT+GGG | - | chr8.2:81147783-81147802 | None:intergenic | 30.0% |
| ! | TTGGAAAATTGGAACCATTT+TGG | + | chr8.2:81146238-81146257 | MS.gene39314:intron | 30.0% |
| !! | ATGAATGTTTTGTTGTAACC+TGG | + | chr8.2:81147729-81147748 | MS.gene39314:intron | 30.0% |
| !!! | TGTTTTAACTCTCTAGTTCT+AGG | + | chr8.2:81146125-81146144 | MS.gene39314:intron | 30.0% |
| AAGTAAACATCAATGCCTTC+TGG | - | chr8.2:81148096-81148115 | None:intergenic | 35.0% | |
| ACAATAGGTTTCTATCCTGA+TGG | - | chr8.2:81146849-81146868 | None:intergenic | 35.0% | |
| ACCTCAATGCAACATTGAAA+AGG | + | chr8.2:81147929-81147948 | MS.gene39314:CDS | 35.0% | |
| ACTTACAGATTGAGGAACAT+AGG | - | chr8.2:81145927-81145946 | None:intergenic | 35.0% | |
| AGCACATATCGTATATAAGC+GGG | + | chr8.2:81148239-81148258 | MS.gene39314:CDS | 35.0% | |
| AGCCATAAACTTACAGATTG+AGG | - | chr8.2:81145935-81145954 | None:intergenic | 35.0% | |
| ATAAGGAAGGTGATATAGTG+TGG | + | chr8.2:81146596-81146615 | MS.gene39314:CDS | 35.0% | |
| ATTACACTGACATTGATCGA+AGG | + | chr8.2:81147463-81147482 | MS.gene39314:intron | 35.0% | |
| GAAAGAGTTGTTTGTTTGTC+TGG | + | chr8.2:81146871-81146890 | MS.gene39314:intron | 35.0% | |
| GGGTCAATTTGATTGTTAGT+AGG | + | chr8.2:81146031-81146050 | MS.gene39314:intron | 35.0% | |
| TAAGGAAGGTGATATAGTGT+GGG | + | chr8.2:81146597-81146616 | MS.gene39314:CDS | 35.0% | |
| TATATATGTCTCTTGCTACC+AGG | + | chr8.2:81147846-81147865 | MS.gene39314:intron | 35.0% | |
| TGTTTAGTATCGTTACAGAC+GGG | + | chr8.2:81146819-81146838 | MS.gene39314:intron | 35.0% | |
| TTAATTAGGCACTTTCCAGA+AGG | + | chr8.2:81148078-81148097 | MS.gene39314:intron | 35.0% | |
| ! | ACCTTTTCAATGTTGCATTG+AGG | - | chr8.2:81147933-81147952 | None:intergenic | 35.0% |
| ! | ACTCGGATTCTTTGGAAAAT+TGG | + | chr8.2:81146227-81146246 | MS.gene39314:intron | 35.0% |
| ! | ATGTGTTTTTCTTTGAGTGC+AGG | + | chr8.2:81147133-81147152 | MS.gene39314:intron | 35.0% |
| ! | CTCTTGAATATGAAAGTGCA+TGG | + | chr8.2:81148150-81148169 | MS.gene39314:CDS | 35.0% |
| ! | GACACAAAAATGGATTTCTG+GGG | - | chr8.2:81147782-81147801 | None:intergenic | 35.0% |
| ! | GATGTTTACTTTGAGAACGT+TGG | + | chr8.2:81148105-81148124 | MS.gene39314:CDS | 35.0% |
| ! | TCATACTCTTTTCCTTTTCC+AGG | - | chr8.2:81147750-81147769 | None:intergenic | 35.0% |
| ! | TTATGGTGTGTCTAAAGTTG+TGG | + | chr8.2:81146555-81146574 | MS.gene39314:CDS | 35.0% |
| !! | GCAAATATTATTCTGGTTCC+TGG | - | chr8.2:81147680-81147699 | None:intergenic | 35.0% |
| !! | GTGGATTGATAGATGCTTTT+GGG | - | chr8.2:81145901-81145920 | None:intergenic | 35.0% |
| !! | GTTTTGTTGTAACCTGGAAA+AGG | + | chr8.2:81147735-81147754 | MS.gene39314:intron | 35.0% |
| !! | TATGCTGGTTTCTTTGAAGT+AGG | + | chr8.2:81147175-81147194 | MS.gene39314:CDS | 35.0% |
| AACCATGCAATTTGGCGAAT+TGG | - | chr8.2:81147267-81147286 | None:intergenic | 40.0% | |
| AACGTAGCAACCATGCAATT+TGG | - | chr8.2:81147275-81147294 | None:intergenic | 40.0% | |
| AAGGAAGGTGATATAGTGTG+GGG | + | chr8.2:81146598-81146617 | MS.gene39314:CDS | 40.0% | |
| ACCTAGAACTCCAGTATAGT+AGG | - | chr8.2:81146704-81146723 | None:intergenic | 40.0% | |
| ACTCCAGTATAGTAGGAAAG+AGG | - | chr8.2:81146697-81146716 | None:intergenic | 40.0% | |
| AGTGTGGGGGATAACTAATT+GGG | + | chr8.2:81146612-81146631 | MS.gene39314:CDS | 40.0% | |
| AGTTACCACGTTTAGCAACA+CGG | + | chr8.2:81148018-81148037 | MS.gene39314:intron | 40.0% | |
| GACACACCATAACCAGTTAA+CGG | - | chr8.2:81146547-81146566 | None:intergenic | 40.0% | |
| GTTCCTCTTTCCTACTATAC+TGG | + | chr8.2:81146691-81146710 | MS.gene39314:CDS | 40.0% | |
| TAGTGTGGGGGATAACTAAT+TGG | + | chr8.2:81146611-81146630 | MS.gene39314:CDS | 40.0% | |
| TATGTGGAAGACATAGCTGA+GGG | + | chr8.2:81148357-81148376 | MS.gene39314:CDS | 40.0% | |
| TATTCTTCAACAGATCCACC+TGG | - | chr8.2:81147867-81147886 | None:intergenic | 40.0% | |
| TCCTACTATACTGGAGTTCT+AGG | + | chr8.2:81146700-81146719 | MS.gene39314:CDS | 40.0% | |
| TCGTAATTTCAGCCGTTAAC+TGG | + | chr8.2:81146532-81146551 | MS.gene39314:intron | 40.0% | |
| TGAAATGTATTTGAGCCGCA+GGG | - | chr8.2:81146654-81146673 | None:intergenic | 40.0% | |
| TGTCCTAGTAATCCGCAATT+TGG | + | chr8.2:81146155-81146174 | MS.gene39314:intron | 40.0% | |
| TGTTTGTTTGTCTGGCTGTT+TGG | + | chr8.2:81146879-81146898 | MS.gene39314:intron | 40.0% | |
| TTCAGTGTCTTACTCTGACA+CGG | + | chr8.2:81147401-81147420 | MS.gene39314:intron | 40.0% | |
| TTGAAATGTATTTGAGCCGC+AGG | - | chr8.2:81146655-81146674 | None:intergenic | 40.0% | |
| TTGAGGCTTGCATATCATAC+TGG | - | chr8.2:81146759-81146778 | None:intergenic | 40.0% | |
| TTTCAGCCGTTAACTGGTTA+TGG | + | chr8.2:81146538-81146557 | MS.gene39314:intron | 40.0% | |
| ! | CAATCAAGGTTTTTGCTCAC+TGG | + | chr8.2:81147539-81147558 | MS.gene39314:intron | 40.0% |
| ! | GTTTACTTTGAGAACGTTGG+AGG | + | chr8.2:81148108-81148127 | MS.gene39314:CDS | 40.0% |
| ! | TGAGAATTTGAAGGAAGTGC+TGG | + | chr8.2:81146406-81146425 | MS.gene39314:intron | 40.0% |
| !! | AAGTGCTGGAAGTAAAGAGA+AGG | + | chr8.2:81147307-81147326 | MS.gene39314:intron | 40.0% |
| !! | CGTGGATTGATAGATGCTTT+TGG | - | chr8.2:81145902-81145921 | None:intergenic | 40.0% |
| AATATGCCAACCAAGGCTTC+AGG | - | chr8.2:81148396-81148415 | None:intergenic | 45.0% | |
| AGAAGGGAAGGTTGTGTATG+TGG | + | chr8.2:81148341-81148360 | MS.gene39314:CDS | 45.0% | |
| AGGAAGGTGATATAGTGTGG+GGG | + | chr8.2:81146599-81146618 | MS.gene39314:CDS | 45.0% | |
| ATAGCTGAGGGTCTTGAGAA+AGG | + | chr8.2:81148369-81148388 | MS.gene39314:CDS | 45.0% | |
| ATATGCCAACCAAGGCTTCA+GGG | - | chr8.2:81148395-81148414 | None:intergenic | 45.0% | |
| ATATGTCTCTTGCTACCAGG+TGG | + | chr8.2:81147849-81147868 | MS.gene39314:intron | 45.0% | |
| CCTAGTAATCCGCAATTTGG+CGG | + | chr8.2:81146158-81146177 | MS.gene39314:intron | 45.0% | |
| CTTATGCTACCGCCAAATTG+CGG | - | chr8.2:81146170-81146189 | None:intergenic | 45.0% | |
| GCCACTAAATATGCCAACCA+AGG | - | chr8.2:81148403-81148422 | None:intergenic | 45.0% | |
| GCCTTGGTTGGCATATTTAG+TGG | + | chr8.2:81148399-81148418 | MS.gene39314:CDS | 45.0% | |
| GTATGTGGAAGACATAGCTG+AGG | + | chr8.2:81148356-81148375 | MS.gene39314:CDS | 45.0% | |
| GTTGCTACGTTGTTGGAACT+TGG | + | chr8.2:81147284-81147303 | MS.gene39314:intron | 45.0% | |
| TGTGAGATCATTCCACACAC+AGG | - | chr8.2:81148183-81148202 | None:intergenic | 45.0% | |
| TTGCATGGTTGCTACGTTGT+TGG | + | chr8.2:81147277-81147296 | MS.gene39314:intron | 45.0% | |
| ! | TATAAGCGGGTTCGTTTGCA+AGG | + | chr8.2:81148252-81148271 | MS.gene39314:CDS | 45.0% |
| ! | TGACGGGTCATCATTTATGC+AGG | - | chr8.2:81147362-81147381 | None:intergenic | 45.0% |
| ! | TTGTTGGAACTTGGAAGTGC+TGG | + | chr8.2:81147293-81147312 | MS.gene39314:intron | 45.0% |
| !! | GTTTTTGTTTCAGCTGCCTC+TGG | + | chr8.2:81147220-81147239 | MS.gene39314:CDS | 45.0% |
| !! | TGAAGGAAGTGCTGGATAGA+GGG | + | chr8.2:81146414-81146433 | MS.gene39314:intron | 45.0% |
| !! | TTGAAGGAAGTGCTGGATAG+AGG | + | chr8.2:81146413-81146432 | MS.gene39314:intron | 45.0% |
| !!! | TGTTATTTATATATTTTAAT+TGG | + | chr8.2:81146333-81146352 | MS.gene39314:intron | 5.0% |
| AAGTTGACCAACTGCACCAG+AGG | - | chr8.2:81147239-81147258 | None:intergenic | 50.0% | |
| ACCCGTCAGAATCTGATCGA+AGG | + | chr8.2:81147374-81147393 | MS.gene39314:intron | 50.0% | |
| ACCTTCCCTTCTCTGATACG+AGG | - | chr8.2:81148333-81148352 | None:intergenic | 50.0% | |
| AGAGTACAGCTTGATCCCTG+CGG | + | chr8.2:81146636-81146655 | MS.gene39314:CDS | 50.0% | |
| CCAGCATAAGCAGTCATTCC+TGG | - | chr8.2:81147163-81147182 | None:intergenic | 50.0% | |
| CCAGGAATGACTGCTTATGC+TGG | + | chr8.2:81147160-81147179 | MS.gene39314:CDS | 50.0% | |
| CGAGACACACTAGTGACATG+TGG | + | chr8.2:81148042-81148061 | MS.gene39314:intron | 50.0% | |
| CGCCTTCGATCAGATTCTGA+CGG | - | chr8.2:81147379-81147398 | None:intergenic | 50.0% | |
| GAAGTAGGCGCTACCAAGAA+AGG | + | chr8.2:81147190-81147209 | MS.gene39314:CDS | 50.0% | |
| GATTGAGGAACATAGGCACG+TGG | - | chr8.2:81145920-81145939 | None:intergenic | 50.0% | |
| GCCTTCGATCAGATTCTGAC+GGG | - | chr8.2:81147378-81147397 | None:intergenic | 50.0% | |
| GGCCAATTCGCCAAATTGCA+TGG | + | chr8.2:81147262-81147281 | MS.gene39314:CDS | 50.0% | |
| GGTGCAGTTGGTCAACTTGT+TGG | + | chr8.2:81147241-81147260 | MS.gene39314:CDS | 50.0% | |
| TCCTGCCTCGTATCAGAGAA+GGG | + | chr8.2:81148325-81148344 | MS.gene39314:CDS | 50.0% | |
| TCTTTGAGTGCAGGTATGCC+AGG | + | chr8.2:81147142-81147161 | MS.gene39314:intron | 50.0% | |
| ! | CCGCCAAATTGCGGATTACT+AGG | - | chr8.2:81146161-81146180 | None:intergenic | 50.0% |
| !! | AAGTGCTGGATAGAGGGAAG+TGG | + | chr8.2:81146420-81146439 | MS.gene39314:intron | 50.0% |
| !! | TTACAGACGGGTTAGCCATC+AGG | + | chr8.2:81146831-81146850 | MS.gene39314:intron | 50.0% |
| AAAGGCCCTGAAGCCTTGGT+TGG | + | chr8.2:81148387-81148406 | MS.gene39314:CDS | 55.0% | |
| CATGGTCGCATACCTGTGTG+TGG | + | chr8.2:81148168-81148187 | MS.gene39314:CDS | 55.0% | |
| GCCTCGTATCAGAGAAGGGA+AGG | + | chr8.2:81148329-81148348 | MS.gene39314:CDS | 55.0% | |
| GTCCTGCCTCGTATCAGAGA+AGG | + | chr8.2:81148324-81148343 | MS.gene39314:CDS | 55.0% | |
| TCCCTTCTCTGATACGAGGC+AGG | - | chr8.2:81148329-81148348 | None:intergenic | 55.0% | |
| TGAGAAAGGCCCTGAAGCCT+TGG | + | chr8.2:81148383-81148402 | MS.gene39314:CDS | 55.0% | |
| ! | CTCGTCCGTGTTGCTAAACG+TGG | - | chr8.2:81148026-81148045 | None:intergenic | 55.0% |
| TCAGCTGCCTCTGGTGCAGT+TGG | + | chr8.2:81147229-81147248 | MS.gene39314:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 81145878 | 81148464 | 81145878 | ID=MS.gene39314 |
| chr8.2 | mRNA | 81145878 | 81148464 | 81145878 | ID=MS.gene39314.t1;Parent=MS.gene39314 |
| chr8.2 | exon | 81145878 | 81145940 | 81145878 | ID=MS.gene39314.t1.exon1;Parent=MS.gene39314.t1 |
| chr8.2 | CDS | 81145878 | 81145940 | 81145878 | ID=cds.MS.gene39314.t1;Parent=MS.gene39314.t1 |
| chr8.2 | exon | 81146544 | 81146721 | 81146544 | ID=MS.gene39314.t1.exon2;Parent=MS.gene39314.t1 |
| chr8.2 | CDS | 81146544 | 81146721 | 81146544 | ID=cds.MS.gene39314.t1;Parent=MS.gene39314.t1 |
| chr8.2 | exon | 81147155 | 81147291 | 81147155 | ID=MS.gene39314.t1.exon3;Parent=MS.gene39314.t1 |
| chr8.2 | CDS | 81147155 | 81147291 | 81147155 | ID=cds.MS.gene39314.t1;Parent=MS.gene39314.t1 |
| chr8.2 | exon | 81147868 | 81147950 | 81147868 | ID=MS.gene39314.t1.exon4;Parent=MS.gene39314.t1 |
| chr8.2 | CDS | 81147868 | 81147950 | 81147868 | ID=cds.MS.gene39314.t1;Parent=MS.gene39314.t1 |
| chr8.2 | exon | 81148086 | 81148464 | 81148086 | ID=MS.gene39314.t1.exon5;Parent=MS.gene39314.t1 |
| chr8.2 | CDS | 81148086 | 81148464 | 81148086 | ID=cds.MS.gene39314.t1;Parent=MS.gene39314.t1 |
| Gene Sequence |
| Protein sequence |
