Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39326.t1 | RHN38828.1 | 97.4 | 342 | 9 | 0 | 1 | 342 | 496 | 837 | 1.20E-190 | 675.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39326.t1 | Q39172 | 70.8 | 342 | 94 | 3 | 6 | 342 | 5 | 345 | 1.4e-139 | 497.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39326.t1 | A0A396GE40 | 97.4 | 342 | 9 | 0 | 1 | 342 | 496 | 837 | 8.5e-191 | 675.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene39326 | 0.814547 | 1.46E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene39326 | 0.81932 | 1.24E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene39326 | 0.860212 | 2.42E-63 | -1.69E-46 |
| MS.gene049794 | MS.gene39326 | 0.811207 | 7.86E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene39326 | 0.824186 | 9.25E-54 | -1.69E-46 |
| MS.gene050397 | MS.gene39326 | 0.829399 | 5.26E-55 | -1.69E-46 |
| MS.gene050400 | MS.gene39326 | 0.837851 | 4.07E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene39326 | 0.892726 | 1.22E-74 | -1.69E-46 |
| MS.gene050670 | MS.gene39326 | 0.855024 | 8.33E-62 | -1.69E-46 |
| MS.gene050747 | MS.gene39326 | 0.819268 | 1.27E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene39326 | 0.839953 | 1.16E-57 | -1.69E-46 |
| MS.gene05081 | MS.gene39326 | 0.802251 | 6.13E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene39326 | 0.821845 | 3.25E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene39326 | 0.837836 | 4.11E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene39326 | 0.837545 | 4.88E-57 | -1.69E-46 |
| MS.gene051525 | MS.gene39326 | 0.855197 | 7.41E-62 | -1.69E-46 |
| MS.gene051582 | MS.gene39326 | 0.803947 | 2.73E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene39326 | 0.823177 | 1.59E-53 | -1.69E-46 |
| MS.gene051692 | MS.gene39326 | 0.877267 | 7.21E-69 | -1.69E-46 |
| MS.gene051838 | MS.gene39326 | 0.816118 | 6.52E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene39326 | 0.820585 | 6.35E-53 | -1.69E-46 |
| MS.gene052011 | MS.gene39326 | -0.809965 | 1.46E-50 | -1.69E-46 |
| MS.gene052134 | MS.gene39326 | 0.828096 | 1.09E-54 | -1.69E-46 |
| MS.gene052135 | MS.gene39326 | 0.830231 | 3.30E-55 | -1.69E-46 |
| MS.gene052136 | MS.gene39326 | 0.833496 | 5.16E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene39326 | 0.844346 | 8.00E-59 | -1.69E-46 |
| MS.gene052310 | MS.gene39326 | 0.805366 | 1.38E-49 | -1.69E-46 |
| MS.gene052322 | MS.gene39326 | 0.841872 | 3.65E-58 | -1.69E-46 |
| MS.gene052346 | MS.gene39326 | 0.855695 | 5.31E-62 | -1.69E-46 |
| MS.gene052414 | MS.gene39326 | 0.839719 | 1.34E-57 | -1.69E-46 |
| MS.gene052421 | MS.gene39326 | 0.831212 | 1.90E-55 | -1.69E-46 |
| MS.gene052481 | MS.gene39326 | 0.882515 | 9.76E-71 | -1.69E-46 |
| MS.gene052484 | MS.gene39326 | 0.838294 | 3.13E-57 | -1.69E-46 |
| MS.gene052485 | MS.gene39326 | 0.839696 | 1.36E-57 | -1.69E-46 |
| MS.gene052501 | MS.gene39326 | 0.857231 | 1.88E-62 | -1.69E-46 |
| MS.gene052503 | MS.gene39326 | 0.818318 | 2.09E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene39326 | 0.852227 | 5.30E-61 | -1.69E-46 |
| MS.gene052615 | MS.gene39326 | 0.820563 | 6.42E-53 | -1.69E-46 |
| MS.gene052823 | MS.gene39326 | 0.812039 | 5.18E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene39326 | 0.812161 | 4.87E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene39326 | 0.858643 | 7.16E-63 | -1.69E-46 |
| MS.gene053203 | MS.gene39326 | 0.801971 | 7.00E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene39326 | 0.826898 | 2.11E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene39326 | 0.813003 | 3.19E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene39326 | 0.824383 | 8.32E-54 | -1.69E-46 |
| MS.gene053286 | MS.gene39326 | 0.812396 | 4.33E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene39326 | 0.860807 | 1.60E-63 | -1.69E-46 |
| MS.gene053574 | MS.gene39326 | 0.838287 | 3.14E-57 | -1.69E-46 |
| MS.gene053824 | MS.gene39326 | 0.813163 | 2.94E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene39326 | 0.807985 | 3.87E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene39326 | 0.824019 | 1.01E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene39326 | 0.847086 | 1.44E-59 | -1.69E-46 |
| MS.gene055206 | MS.gene39326 | 0.818469 | 1.93E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene39326 | 0.834964 | 2.21E-56 | -1.69E-46 |
| MS.gene055369 | MS.gene39326 | 0.802607 | 5.18E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene39326 | 0.806959 | 6.39E-50 | -1.69E-46 |
| MS.gene055564 | MS.gene39326 | 0.804889 | 1.74E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene39326 | 0.802368 | 5.80E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene39326 | 0.802609 | 5.17E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene39326 | 0.847972 | 8.24E-60 | -1.69E-46 |
| MS.gene055909 | MS.gene39326 | 0.811708 | 6.12E-51 | -1.69E-46 |
| MS.gene055911 | MS.gene39326 | 0.810944 | 8.96E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene39326 | 0.805476 | 1.31E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene39326 | 0.801969 | 7.01E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene39326 | 0.804124 | 2.51E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene39326 | 0.840056 | 1.09E-57 | -1.69E-46 |
| MS.gene056374 | MS.gene39326 | 0.813554 | 2.41E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene39326 | 0.80522 | 1.48E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene39326 | 0.853715 | 1.99E-61 | -1.69E-46 |
| MS.gene056514 | MS.gene39326 | 0.814753 | 1.31E-51 | -1.69E-46 |
| MS.gene05666 | MS.gene39326 | 0.814972 | 1.17E-51 | -1.69E-46 |
| MS.gene056796 | MS.gene39326 | 0.804832 | 1.79E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene39326 | 0.873427 | 1.48E-67 | -1.69E-46 |
| MS.gene056897 | MS.gene39326 | 0.80362 | 3.20E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene39326 | 0.802588 | 5.22E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene39326 | 0.837578 | 4.79E-57 | -1.69E-46 |
| MS.gene057146 | MS.gene39326 | 0.803231 | 3.85E-49 | -1.69E-46 |
| MS.gene057196 | MS.gene39326 | 0.821841 | 3.26E-53 | -1.69E-46 |
| MS.gene057331 | MS.gene39326 | 0.862356 | 5.37E-64 | -1.69E-46 |
| MS.gene057332 | MS.gene39326 | 0.801262 | 9.78E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene39326 | 0.84492 | 5.61E-59 | -1.69E-46 |
| MS.gene057658 | MS.gene39326 | 0.801104 | 1.05E-48 | -1.69E-46 |
| MS.gene057734 | MS.gene39326 | 0.809801 | 1.58E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene39326 | 0.816429 | 5.55E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene39326 | 0.804711 | 1.89E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene39326 | 0.859229 | 4.78E-63 | -1.69E-46 |
| MS.gene058006 | MS.gene39326 | 0.834447 | 2.98E-56 | -1.69E-46 |
| MS.gene058007 | MS.gene39326 | 0.822484 | 2.31E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene39326 | 0.824857 | 6.43E-54 | -1.69E-46 |
| MS.gene058323 | MS.gene39326 | 0.806055 | 9.90E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene39326 | 0.845434 | 4.07E-59 | -1.69E-46 |
| MS.gene05842 | MS.gene39326 | 0.805172 | 1.52E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene39326 | 0.855355 | 6.67E-62 | -1.69E-46 |
| MS.gene058660 | MS.gene39326 | 0.805003 | 1.65E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene39326 | 0.845314 | 4.39E-59 | -1.69E-46 |
| MS.gene058838 | MS.gene39326 | 0.829897 | 3.98E-55 | -1.69E-46 |
| MS.gene05883 | MS.gene39326 | 0.836868 | 7.27E-57 | -1.69E-46 |
| MS.gene058995 | MS.gene39326 | 0.842134 | 3.11E-58 | -1.69E-46 |
| MS.gene059023 | MS.gene39326 | 0.80735 | 5.28E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene39326 | 0.82612 | 3.23E-54 | -1.69E-46 |
| MS.gene059082 | MS.gene39326 | 0.803005 | 4.28E-49 | -1.69E-46 |
| MS.gene059141 | MS.gene39326 | 0.805569 | 1.25E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene39326 | 0.817254 | 3.63E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene39326 | 0.827732 | 1.33E-54 | -1.69E-46 |
| MS.gene059455 | MS.gene39326 | 0.810444 | 1.15E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene39326 | 0.840004 | 1.13E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene39326 | 0.842683 | 2.23E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene39326 | 0.820591 | 6.32E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene39326 | 0.819826 | 9.47E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene39326 | 0.81783 | 2.69E-52 | -1.69E-46 |
| MS.gene060193 | MS.gene39326 | 0.804025 | 2.63E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene39326 | 0.883957 | 2.89E-71 | -1.69E-46 |
| MS.gene060469 | MS.gene39326 | 0.804227 | 2.39E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene39326 | 0.802367 | 5.80E-49 | -1.69E-46 |
| MS.gene060485 | MS.gene39326 | 0.829979 | 3.80E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene39326 | 0.84485 | 5.86E-59 | -1.69E-46 |
| MS.gene060835 | MS.gene39326 | 0.83617 | 1.09E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene39326 | 0.857736 | 1.33E-62 | -1.69E-46 |
| MS.gene06092 | MS.gene39326 | 0.819124 | 1.37E-52 | -1.69E-46 |
| MS.gene060986 | MS.gene39326 | 0.810343 | 1.21E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene39326 | 0.834362 | 3.13E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020076 | MS.gene39326 | PPI |
| MS.gene39327 | MS.gene39326 | PPI |
| MS.gene022737 | MS.gene39326 | PPI |
| MS.gene39312 | MS.gene39326 | PPI |
| MS.gene022722 | MS.gene39326 | PPI |
| MS.gene39326 | MS.gene54433 | PPI |
| MS.gene020226 | MS.gene39326 | PPI |
| MS.gene39326 | MS.gene97874 | PPI |
| MS.gene020228 | MS.gene39326 | PPI |
| MS.gene39326 | MS.gene022721 | PPI |
| MS.gene39326 | MS.gene022738 | PPI |
| MS.gene39326 | MS.gene39313 | PPI |
| MS.gene39326 | MS.gene41778 | PPI |
| MS.gene39326 | MS.gene067859 | PPI |
| MS.gene54434 | MS.gene39326 | PPI |
| MS.gene020239 | MS.gene39326 | PPI |
| MS.gene39326 | MS.gene022736 | PPI |
| MS.gene08162 | MS.gene39326 | PPI |
| MS.gene39326 | MS.gene022737 | PPI |
| MS.gene39315 | MS.gene39326 | PPI |
| MS.gene39326 | MS.gene022735 | PPI |
| MS.gene97874 | MS.gene39326 | PPI |
| MS.gene39326 | MS.gene45375 | PPI |
| MS.gene042467 | MS.gene39326 | PPI |
| MS.gene39326 | MS.gene39314 | PPI |
| MS.gene020077 | MS.gene39326 | PPI |
| MS.gene39326 | MS.gene020227 | PPI |
| MS.gene020033 | MS.gene39326 | PPI |
| MS.gene020225 | MS.gene39326 | PPI |
| MS.gene39326 | MS.gene069341 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39326.t1 | MTR_8g009840 | 97.321 | 336 | 9 | 0 | 1 | 336 | 1 | 336 | 0.0 | 676 |
| MS.gene39326.t1 | MTR_8g009830 | 93.275 | 342 | 23 | 0 | 1 | 342 | 1 | 342 | 0.0 | 657 |
| MS.gene39326.t1 | MTR_8g009820 | 88.047 | 343 | 40 | 1 | 1 | 342 | 60 | 402 | 0.0 | 632 |
| MS.gene39326.t1 | MTR_8g010030 | 81.105 | 344 | 63 | 2 | 1 | 342 | 1 | 344 | 0.0 | 577 |
| MS.gene39326.t1 | MTR_8g009980 | 82.319 | 345 | 57 | 3 | 1 | 342 | 1 | 344 | 0.0 | 572 |
| MS.gene39326.t1 | MTR_8g010020 | 75.510 | 343 | 52 | 2 | 1 | 342 | 1 | 312 | 0.0 | 529 |
| MS.gene39326.t1 | MTR_8g010000 | 73.333 | 345 | 63 | 4 | 1 | 342 | 1 | 319 | 0.0 | 511 |
| MS.gene39326.t1 | MTR_4g082970 | 66.181 | 343 | 112 | 3 | 3 | 342 | 9 | 350 | 6.20e-163 | 459 |
| MS.gene39326.t1 | MTR_7g406860 | 60.234 | 342 | 134 | 2 | 3 | 342 | 5 | 346 | 7.12e-146 | 416 |
| MS.gene39326.t1 | MTR_8g007325 | 88.991 | 218 | 23 | 1 | 1 | 217 | 1 | 218 | 2.21e-144 | 407 |
| MS.gene39326.t1 | MTR_0011s0280 | 46.552 | 348 | 177 | 4 | 2 | 342 | 1 | 346 | 1.93e-109 | 323 |
| MS.gene39326.t1 | MTR_2g088190 | 40.517 | 348 | 190 | 9 | 4 | 339 | 5 | 347 | 8.92e-76 | 237 |
| MS.gene39326.t1 | MTR_2g088220 | 40.751 | 346 | 192 | 9 | 4 | 339 | 6 | 348 | 6.00e-71 | 224 |
| MS.gene39326.t1 | MTR_2g088200 | 37.752 | 347 | 202 | 8 | 4 | 339 | 5 | 348 | 5.31e-65 | 209 |
| MS.gene39326.t1 | MTR_5g095030 | 57.031 | 128 | 55 | 0 | 213 | 340 | 9 | 136 | 1.49e-49 | 162 |
| MS.gene39326.t1 | MTR_4g086410 | 37.321 | 209 | 123 | 4 | 137 | 339 | 416 | 622 | 4.36e-28 | 115 |
| MS.gene39326.t1 | MTR_4g086400 | 36.842 | 209 | 124 | 5 | 137 | 339 | 276 | 482 | 6.57e-28 | 114 |
| MS.gene39326.t1 | MTR_4g086400 | 36.842 | 209 | 124 | 5 | 137 | 339 | 416 | 622 | 1.08e-27 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39326.t1 | AT3G03080 | 72.093 | 344 | 89 | 4 | 4 | 342 | 9 | 350 | 0.0 | 505 |
| MS.gene39326.t1 | AT5G16970 | 71.053 | 342 | 93 | 4 | 6 | 342 | 5 | 345 | 1.63e-180 | 503 |
| MS.gene39326.t1 | AT5G17000 | 70.760 | 342 | 94 | 5 | 6 | 342 | 5 | 345 | 4.43e-177 | 494 |
| MS.gene39326.t1 | AT5G16990 | 70.674 | 341 | 95 | 5 | 6 | 342 | 4 | 343 | 4.60e-177 | 494 |
| MS.gene39326.t1 | AT1G26320 | 68.497 | 346 | 103 | 3 | 2 | 342 | 7 | 351 | 2.03e-174 | 488 |
| MS.gene39326.t1 | AT1G26320 | 67.341 | 346 | 102 | 4 | 2 | 342 | 7 | 346 | 5.63e-170 | 476 |
| MS.gene39326.t1 | AT5G37980 | 66.472 | 343 | 108 | 4 | 6 | 342 | 12 | 353 | 1.29e-168 | 473 |
| MS.gene39326.t1 | AT5G37940 | 66.181 | 343 | 109 | 5 | 6 | 342 | 12 | 353 | 9.79e-167 | 469 |
| MS.gene39326.t1 | AT5G16960 | 66.377 | 345 | 110 | 4 | 1 | 340 | 1 | 344 | 7.19e-166 | 466 |
| MS.gene39326.t1 | AT5G16960 | 66.377 | 345 | 110 | 4 | 1 | 340 | 1 | 344 | 7.19e-166 | 466 |
| MS.gene39326.t1 | AT5G38000 | 64.809 | 341 | 113 | 5 | 6 | 340 | 12 | 351 | 1.56e-161 | 456 |
| MS.gene39326.t1 | AT5G38000 | 63.501 | 337 | 113 | 6 | 6 | 333 | 12 | 347 | 7.26e-155 | 439 |
| MS.gene39326.t1 | AT3G59845 | 62.974 | 343 | 120 | 4 | 4 | 340 | 5 | 346 | 2.25e-153 | 434 |
| MS.gene39326.t1 | AT5G38000 | 60.997 | 341 | 107 | 6 | 6 | 340 | 12 | 332 | 8.38e-146 | 415 |
| MS.gene39326.t1 | AT1G65560 | 58.261 | 345 | 137 | 4 | 4 | 342 | 7 | 350 | 7.20e-138 | 395 |
| MS.gene39326.t1 | AT5G16980 | 59.064 | 342 | 103 | 3 | 1 | 342 | 1 | 305 | 1.04e-137 | 393 |
| MS.gene39326.t1 | AT5G16980 | 76.991 | 226 | 52 | 0 | 117 | 342 | 14 | 239 | 8.71e-128 | 365 |
| MS.gene39326.t1 | AT5G16980 | 76.991 | 226 | 52 | 0 | 117 | 342 | 14 | 239 | 8.71e-128 | 365 |
| MS.gene39326.t1 | AT3G59845 | 68.033 | 244 | 77 | 1 | 98 | 340 | 1 | 244 | 6.71e-119 | 343 |
| MS.gene39326.t1 | AT1G65560 | 60.148 | 271 | 103 | 2 | 77 | 342 | 4 | 274 | 2.11e-114 | 333 |
| MS.gene39326.t1 | AT5G17000 | 71.429 | 217 | 56 | 5 | 6 | 217 | 5 | 220 | 1.04e-107 | 315 |
| MS.gene39326.t1 | AT1G49670 | 36.364 | 209 | 125 | 5 | 137 | 339 | 412 | 618 | 6.09e-27 | 112 |
| MS.gene39326.t1 | AT1G49670 | 36.453 | 203 | 121 | 5 | 143 | 339 | 441 | 641 | 1.12e-25 | 108 |
| MS.gene39326.t1 | AT5G37960 | 54.667 | 75 | 34 | 0 | 263 | 337 | 27 | 101 | 1.00e-19 | 83.6 |
Find 80 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTTCTTCTTTGTAGTTAA+AGG | 0.191955 | 8.2:+81241849 | None:intergenic |
| ATGTTCATGTCTGATTCTTT+AGG | 0.202234 | 8.2:+81242898 | None:intergenic |
| GATCTCTTGAAGAATAAATT+TGG | 0.210627 | 8.2:-81241883 | MS.gene39326:CDS |
| TAGTTTGGAGTCTTACTAAA+TGG | 0.233196 | 8.2:-81242514 | MS.gene39326:CDS |
| ACCTGAAGGTGTCACAAATT+TGG | 0.261566 | 8.2:-81241366 | MS.gene39326:CDS |
| TGTTCATGTCTGATTCTTTA+GGG | 0.269511 | 8.2:+81242899 | None:intergenic |
| TCCTATTATACCGGAATTCT+TGG | 0.286357 | 8.2:-81242428 | MS.gene39326:intron |
| GCCAAATTTGTGACACCTTC+AGG | 0.288617 | 8.2:+81241365 | None:intergenic |
| AAGTAAATGTCAATGCCTTC+TGG | 0.290715 | 8.2:+81241491 | None:intergenic |
| TATGCTGGTTTCTTTGAATT+AGG | 0.306561 | 8.2:-81242281 | MS.gene39326:CDS |
| ATATCATCTTTCTTATAATC+TGG | 0.308249 | 8.2:+81242536 | None:intergenic |
| TGTGAGATCATTCCACTTAC+AGG | 0.322522 | 8.2:+81241404 | None:intergenic |
| CAGTAGTGTCCTTGGTCATC+AGG | 0.350101 | 8.2:+81242779 | None:intergenic |
| TTGCAGCCACTGACAGGCTT+TGG | 0.351353 | 8.2:-81242587 | MS.gene39326:intron |
| ACCAAGAATTCCGGTATAAT+AGG | 0.354839 | 8.2:+81242427 | None:intergenic |
| ATAAGAAAGATGATATAGTT+TGG | 0.367977 | 8.2:-81242529 | MS.gene39326:CDS |
| ACCTCAATGCAGCTTTAAAA+AGG | 0.376014 | 8.2:-81241825 | MS.gene39326:intron |
| GGTGCTGTTGGTCAACTTGT+TGG | 0.378160 | 8.2:-81242215 | MS.gene39326:CDS |
| TATAGTTTGGTTCCTACAAC+TGG | 0.385625 | 8.2:-81242485 | MS.gene39326:CDS |
| ACCTTTCCTTCTCTTATAAG+AGG | 0.391934 | 8.2:+81241254 | None:intergenic |
| TTTAAAGCTGCATTGAGGTC+TGG | 0.396923 | 8.2:+81241829 | None:intergenic |
| AGCATATATACCAAGAATTC+CGG | 0.397211 | 8.2:+81242418 | None:intergenic |
| GTATCTAAAGTTGTAGAATC+TGG | 0.408050 | 8.2:-81242563 | MS.gene39326:CDS |
| CAACATTGCGACCACTATAT+AGG | 0.408615 | 8.2:+81241174 | None:intergenic |
| TGTTATGTTGTTGGAAGTGC+TGG | 0.408681 | 8.2:-81242170 | MS.gene39326:CDS |
| TTTGAGCAGAACAACATCAT+TGG | 0.410110 | 8.2:+81242837 | None:intergenic |
| TCATTCCACTTACAGGTATA+CGG | 0.410179 | 8.2:+81241411 | None:intergenic |
| GTTTATGTTTCAGCTGCATC+TGG | 0.415560 | 8.2:-81242236 | MS.gene39326:CDS |
| TAAATGGGAAGAGTATAGTT+TGG | 0.417552 | 8.2:-81242498 | MS.gene39326:CDS |
| CCAGCATATGCAGTCATTCC+CGG | 0.420317 | 8.2:+81242296 | None:intergenic |
| AAATCATATATAAGCGGATT+CGG | 0.423759 | 8.2:-81241340 | MS.gene39326:CDS |
| GGACTTGGTGCTCTCACCCC+TGG | 0.424238 | 8.2:-81242754 | MS.gene39326:CDS |
| TTGTGGAAGCTTGAGAGTTA+TGG | 0.428343 | 8.2:+81242864 | None:intergenic |
| AATAGTCCTGCTGCATTGAT+TGG | 0.437627 | 8.2:-81241197 | MS.gene39326:CDS |
| TTCCTTCTCTTATAAGAGGC+AGG | 0.439768 | 8.2:+81241258 | None:intergenic |
| AGTTTGGAGTCTTACTAAAT+GGG | 0.454941 | 8.2:-81242513 | MS.gene39326:CDS |
| TTGCATGGTTGTTATGTTGT+TGG | 0.455131 | 8.2:-81242179 | MS.gene39326:CDS |
| AGAAGGAAAGGTTGTGTATG+TGG | 0.461025 | 8.2:-81241243 | MS.gene39326:CDS |
| GACATTTACTTTGAGAATGT+TGG | 0.461902 | 8.2:-81241479 | MS.gene39326:CDS |
| TCAGCTGCATCTGGTGCTGT+TGG | 0.461947 | 8.2:-81242227 | MS.gene39326:CDS |
| TTGTTTGAGTACAGGTATGC+CGG | 0.476392 | 8.2:-81242315 | MS.gene39326:intron |
| ATTCTGAAGGACTATGTGTC+TGG | 0.484866 | 8.2:-81242925 | MS.gene39326:CDS |
| GAGTAATTGCAGCCACTGAC+AGG | 0.490838 | 8.2:-81242593 | MS.gene39326:intron |
| CTATATAGTGGTCGCAATGT+TGG | 0.501907 | 8.2:-81241173 | MS.gene39326:CDS |
| AGAGCATGGCATACAGAACC+AGG | 0.503656 | 8.2:+81242736 | None:intergenic |
| GTCCCACTCTCCTATTATAC+CGG | 0.509799 | 8.2:-81242437 | MS.gene39326:CDS |
| AAGGACACTACTGCAGGACT+TGG | 0.525666 | 8.2:-81242769 | MS.gene39326:CDS |
| GTCCTGCCTCTTATAAGAGA+AGG | 0.533643 | 8.2:-81241260 | MS.gene39326:CDS |
| AAGTCCTGCAGTAGTGTCCT+TGG | 0.538129 | 8.2:+81242771 | None:intergenic |
| AAGTGCTGGAACTAAAGAAA+AGG | 0.538814 | 8.2:-81242156 | MS.gene39326:intron |
| ATTTACTTTGAGAATGTTGG+AGG | 0.546216 | 8.2:-81241476 | MS.gene39326:CDS |
| GTCATCAGGAGTCTCATGTA+AGG | 0.547419 | 8.2:+81242793 | None:intergenic |
| CATGGCCGTATACCTGTAAG+TGG | 0.555620 | 8.2:-81241416 | MS.gene39326:CDS |
| CCGGGAATGACTGCATATGC+TGG | 0.559881 | 8.2:-81242296 | MS.gene39326:CDS |
| TATAGGCCAATCAATGCAGC+AGG | 0.561044 | 8.2:+81241191 | None:intergenic |
| ATATAAGCGGATTCGGATCG+AGG | 0.562832 | 8.2:-81241333 | MS.gene39326:CDS |
| GCCTCTTATAAGAGAAGGAA+AGG | 0.563797 | 8.2:-81241255 | MS.gene39326:CDS |
| TTCCGGTATAATAGGAGAGT+GGG | 0.571881 | 8.2:+81242435 | None:intergenic |
| TGTTTGAGTACAGGTATGCC+GGG | 0.572767 | 8.2:-81242314 | MS.gene39326:intron |
| CACTTACAGGTATACGGCCA+TGG | 0.573703 | 8.2:+81241417 | None:intergenic |
| TAAATTAGGCACTTTCCAGA+AGG | 0.596952 | 8.2:-81241506 | MS.gene39326:intron |
| GCATTGATTGGCCTATATAG+TGG | 0.599614 | 8.2:-81241185 | MS.gene39326:CDS |
| ATTCCGGTATAATAGGAGAG+TGG | 0.600688 | 8.2:+81242434 | None:intergenic |
| TTCCTGAGATGGTGGAAGTG+AGG | 0.601646 | 8.2:-81242960 | None:intergenic |
| ATGACCAAGGACACTACTGC+AGG | 0.602197 | 8.2:-81242775 | MS.gene39326:CDS |
| GGTCAATTTGCAAAATTGCA+TGG | 0.604788 | 8.2:-81242194 | MS.gene39326:CDS |
| TATAAGCGGATTCGGATCGA+GGG | 0.614787 | 8.2:-81241332 | MS.gene39326:CDS |
| TGGCACAAATCATATATAAG+CGG | 0.616296 | 8.2:-81241346 | MS.gene39326:CDS |
| GAACAAACAAGTGATTCTGA+AGG | 0.624620 | 8.2:-81242938 | MS.gene39326:CDS |
| ACAACATCATTGGAACCTTG+TGG | 0.632489 | 8.2:+81242847 | None:intergenic |
| GATACTCCAAAGCCTGTCAG+TGG | 0.639959 | 8.2:+81242581 | None:intergenic |
| TTTACTTTGAGAATGTTGGA+GGG | 0.645904 | 8.2:-81241475 | MS.gene39326:CDS |
| TATAATCTTACTCAACCTGA+AGG | 0.658022 | 8.2:-81241380 | MS.gene39326:CDS |
| AGCATGGCATACAGAACCAG+GGG | 0.674611 | 8.2:+81242738 | None:intergenic |
| ATAACTCTCAAGCTTCCACA+AGG | 0.675514 | 8.2:-81242862 | MS.gene39326:CDS |
| CATGAGACTCCTGATGACCA+AGG | 0.680547 | 8.2:-81242788 | MS.gene39326:CDS |
| GAGCATGGCATACAGAACCA+GGG | 0.684578 | 8.2:+81242737 | None:intergenic |
| TCGCAATGTTGGTAAACAAG+TGG | 0.707437 | 8.2:-81241162 | MS.gene39326:CDS |
| GTATGTGGAAGACATAGCTG+AGG | 0.744288 | 8.2:-81241228 | MS.gene39326:CDS |
| TATGTGGAAGACATAGCTGA+GGG | 0.752621 | 8.2:-81241227 | MS.gene39326:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATACTATTTTCAATTT+TGG | - | chr8.2:81242146-81242165 | MS.gene39326:intron | 10.0% |
| !! | GATATCAATTTATGTAAATT+AGG | - | chr8.2:81242574-81242593 | MS.gene39326:CDS | 15.0% |
| !!! | AAAAATCATAGGTTTTTTTT+AGG | + | chr8.2:81242021-81242040 | None:intergenic | 15.0% |
| !!! | AAAATCATAGGTTTTTTTTA+GGG | + | chr8.2:81242020-81242039 | None:intergenic | 15.0% |
| !! | ACAGTAGAATAAAAAATCAT+AGG | + | chr8.2:81242032-81242051 | None:intergenic | 20.0% |
| !! | ATAAGAAAGATGATATAGTT+TGG | - | chr8.2:81241565-81241584 | MS.gene39326:intron | 20.0% |
| !! | ATATCATCTTTCTTATAATC+TGG | + | chr8.2:81241561-81241580 | None:intergenic | 20.0% |
| !!! | AAATCATAGGTTTTTTTTAG+GGG | + | chr8.2:81242019-81242038 | None:intergenic | 20.0% |
| !!! | ACTCCAAAAATTTTGTATAA+AGG | + | chr8.2:81242812-81242831 | None:intergenic | 20.0% |
| !!! | GTCTGTTATTAACATTTTTA+TGG | - | chr8.2:81242291-81242310 | MS.gene39326:CDS | 20.0% |
| !!! | TCACCTTTATACAAAATTTT+TGG | - | chr8.2:81242806-81242825 | MS.gene39326:CDS | 20.0% |
| !!! | TGATAATTCATCATTTTTAC+AGG | + | chr8.2:81241992-81242011 | None:intergenic | 20.0% |
| ! | GAATCATCTTTCTTATAATC+TGG | - | chr8.2:81242177-81242196 | MS.gene39326:CDS | 25.0% |
| ! | GATCTCTTGAAGAATAAATT+TGG | - | chr8.2:81242211-81242230 | MS.gene39326:CDS | 25.0% |
| ! | TGTCAAAAAACACAACAAAA+TGG | + | chr8.2:81241747-81241766 | None:intergenic | 25.0% |
| !! | AAATCATATATAAGCGGATT+CGG | - | chr8.2:81242754-81242773 | MS.gene39326:CDS | 25.0% |
| !!! | TAAACATTCTCTCCTTTTTT+AGG | + | chr8.2:81241843-81241862 | None:intergenic | 25.0% |
| AGCATATATACCAAGAATTC+CGG | + | chr8.2:81241679-81241698 | None:intergenic | 30.0% | |
| ATGTTCATGTCTGATTCTTT+AGG | + | chr8.2:81241199-81241218 | None:intergenic | 30.0% | |
| CATAGACACATGCAATAATT+TGG | + | chr8.2:81242464-81242483 | None:intergenic | 30.0% | |
| CATATAGTTGCAATTGATCA+AGG | - | chr8.2:81241420-81241439 | MS.gene39326:CDS | 30.0% | |
| CTATGTATCAGTGTTAGTAT+CGG | - | chr8.2:81242479-81242498 | MS.gene39326:CDS | 30.0% | |
| TATAATCTTACTCAACCTGA+AGG | - | chr8.2:81242714-81242733 | MS.gene39326:intron | 30.0% | |
| TGGCACAAATCATATATAAG+CGG | - | chr8.2:81242748-81242767 | MS.gene39326:intron | 30.0% | |
| TGGTTCTTCTTTGTAGTTAA+AGG | + | chr8.2:81242248-81242267 | None:intergenic | 30.0% | |
| TGTTCATGTCTGATTCTTTA+GGG | + | chr8.2:81241198-81241217 | None:intergenic | 30.0% | |
| ! | AGTTTGGAGTCTTACTAAAT+GGG | - | chr8.2:81241581-81241600 | MS.gene39326:intron | 30.0% |
| ! | ATTTACTTTGAGAATGTTGG+AGG | - | chr8.2:81242618-81242637 | MS.gene39326:intron | 30.0% |
| ! | ATTTTGAACATTCCAGTTGT+AGG | + | chr8.2:81241624-81241643 | None:intergenic | 30.0% |
| ! | GACATTTACTTTGAGAATGT+TGG | - | chr8.2:81242615-81242634 | MS.gene39326:intron | 30.0% |
| ! | GTATCTAAAGTTGTAGAATC+TGG | - | chr8.2:81241531-81241550 | MS.gene39326:intron | 30.0% |
| ! | TAAATGGGAAGAGTATAGTT+TGG | - | chr8.2:81241596-81241615 | MS.gene39326:intron | 30.0% |
| ! | TAGTTTGGAGTCTTACTAAA+TGG | - | chr8.2:81241580-81241599 | MS.gene39326:intron | 30.0% |
| ! | TTTACTTTGAGAATGTTGGA+GGG | - | chr8.2:81242619-81242638 | MS.gene39326:intron | 30.0% |
| !! | TATGCTGGTTTCTTTGAATT+AGG | - | chr8.2:81241813-81241832 | MS.gene39326:intron | 30.0% |
| AAGTAAATGTCAATGCCTTC+TGG | + | chr8.2:81242606-81242625 | None:intergenic | 35.0% | |
| AATTGATGAAAGAGAGAGCA+TGG | + | chr8.2:81241375-81241394 | None:intergenic | 35.0% | |
| ACCAAGAATTCCGGTATAAT+AGG | + | chr8.2:81241670-81241689 | None:intergenic | 35.0% | |
| ACCTTTCCTTCTCTTATAAG+AGG | + | chr8.2:81242843-81242862 | None:intergenic | 35.0% | |
| GAACAAACAAGTGATTCTGA+AGG | - | chr8.2:81241156-81241175 | MS.gene39326:CDS | 35.0% | |
| GAATTAGGCAGTCCTAAAAA+AGG | - | chr8.2:81241828-81241847 | MS.gene39326:CDS | 35.0% | |
| GGATTGTGGTTATTGCAATT+AGG | + | chr8.2:81242080-81242099 | None:intergenic | 35.0% | |
| GGTCAATTTGCAAAATTGCA+TGG | - | chr8.2:81241900-81241919 | MS.gene39326:intron | 35.0% | |
| TAAATTAGGCACTTTCCAGA+AGG | - | chr8.2:81242588-81242607 | MS.gene39326:intron | 35.0% | |
| TCATTCCACTTACAGGTATA+CGG | + | chr8.2:81242686-81242705 | None:intergenic | 35.0% | |
| TCCTATTATACCGGAATTCT+TGG | - | chr8.2:81241666-81241685 | MS.gene39326:intron | 35.0% | |
| TTACGCATTTGTTTGAGTAC+AGG | - | chr8.2:81241771-81241790 | MS.gene39326:intron | 35.0% | |
| TTCTTATAATCTGGCACACT+AGG | - | chr8.2:81242186-81242205 | MS.gene39326:CDS | 35.0% | |
| TTGCATGGTTGTTATGTTGT+TGG | - | chr8.2:81241915-81241934 | MS.gene39326:intron | 35.0% | |
| TTTGAGCAGAACAACATCAT+TGG | + | chr8.2:81241260-81241279 | None:intergenic | 35.0% | |
| ! | CTTTTGAATATGAGAGTCCA+TGG | - | chr8.2:81242660-81242679 | MS.gene39326:intron | 35.0% |
| ! | GCATCGACACTTTATATTGA+AGG | - | chr8.2:81242364-81242383 | MS.gene39326:intron | 35.0% |
| ! | TATAGTTTGGTTCCTACAAC+TGG | - | chr8.2:81241609-81241628 | MS.gene39326:intron | 35.0% |
| !! | AAGTGCTGGAACTAAAGAAA+AGG | - | chr8.2:81241938-81241957 | MS.gene39326:intron | 35.0% |
| !! | ACCTCAATGCAGCTTTAAAA+AGG | - | chr8.2:81242269-81242288 | MS.gene39326:CDS | 35.0% |
| !! | ATAAAGTGTCGATGCTACAT+AGG | + | chr8.2:81242359-81242378 | None:intergenic | 35.0% |
| !!! | ACCTTTTTAAAGCTGCATTG+AGG | + | chr8.2:81242273-81242292 | None:intergenic | 35.0% |
| AATCCATGTCTTTGTTCGCT+TGG | - | chr8.2:81242095-81242114 | MS.gene39326:intron | 40.0% | |
| ACAACATCATTGGAACCTTG+TGG | + | chr8.2:81241250-81241269 | None:intergenic | 40.0% | |
| AGAAGGAAAGGTTGTGTATG+TGG | - | chr8.2:81242851-81242870 | MS.gene39326:CDS | 40.0% | |
| ATAACTCTCAAGCTTCCACA+AGG | - | chr8.2:81241232-81241251 | MS.gene39326:CDS | 40.0% | |
| ATTCCGGTATAATAGGAGAG+TGG | + | chr8.2:81241663-81241682 | None:intergenic | 40.0% | |
| CAACATTGCGACCACTATAT+AGG | + | chr8.2:81242923-81242942 | None:intergenic | 40.0% | |
| CTATATAGTGGTCGCAATGT+TGG | - | chr8.2:81242921-81242940 | MS.gene39326:CDS | 40.0% | |
| GCCTCTTATAAGAGAAGGAA+AGG | - | chr8.2:81242839-81242858 | MS.gene39326:CDS | 40.0% | |
| GTTTATGTTTCAGCTGCATC+TGG | - | chr8.2:81241858-81241877 | MS.gene39326:CDS | 40.0% | |
| TATGTGGAAGACATAGCTGA+GGG | - | chr8.2:81242867-81242886 | MS.gene39326:CDS | 40.0% | |
| TGTCAGACAGTAACATGTGT+AGG | + | chr8.2:81242393-81242412 | None:intergenic | 40.0% | |
| TGTGAGATCATTCCACTTAC+AGG | + | chr8.2:81242693-81242712 | None:intergenic | 40.0% | |
| TTATAATCTGGCACACTAGG+TGG | - | chr8.2:81242189-81242208 | MS.gene39326:CDS | 40.0% | |
| TTCCGGTATAATAGGAGAGT+GGG | + | chr8.2:81241662-81241681 | None:intergenic | 40.0% | |
| TTCCTTCTCTTATAAGAGGC+AGG | + | chr8.2:81242839-81242858 | None:intergenic | 40.0% | |
| TTGTGGAAGCTTGAGAGTTA+TGG | + | chr8.2:81241233-81241252 | None:intergenic | 40.0% | |
| TTGTTTGAGTACAGGTATGC+CGG | - | chr8.2:81241779-81241798 | MS.gene39326:intron | 40.0% | |
| ! | AATAGTCCTGCTGCATTGAT+TGG | - | chr8.2:81242897-81242916 | MS.gene39326:CDS | 40.0% |
| ! | ATTCTGAAGGACTATGTGTC+TGG | - | chr8.2:81241169-81241188 | MS.gene39326:CDS | 40.0% |
| ! | TCGCAATGTTGGTAAACAAG+TGG | - | chr8.2:81242932-81242951 | MS.gene39326:CDS | 40.0% |
| ! | TGTTATGTTGTTGGAAGTGC+TGG | - | chr8.2:81241924-81241943 | MS.gene39326:intron | 40.0% |
| ! | TTTAAAGCTGCATTGAGGTC+TGG | + | chr8.2:81242268-81242287 | None:intergenic | 40.0% |
| !! | ACCTGAAGGTGTCACAAATT+TGG | - | chr8.2:81242728-81242747 | MS.gene39326:intron | 40.0% |
| !! | GCATTGATTGGCCTATATAG+TGG | - | chr8.2:81242909-81242928 | MS.gene39326:CDS | 40.0% |
| GCCAAATTTGTGACACCTTC+AGG | + | chr8.2:81242732-81242751 | None:intergenic | 45.0% | |
| GTATGTGGAAGACATAGCTG+AGG | - | chr8.2:81242866-81242885 | MS.gene39326:CDS | 45.0% | |
| GTCATCAGGAGTCTCATGTA+AGG | + | chr8.2:81241304-81241323 | None:intergenic | 45.0% | |
| GTCCCACTCTCCTATTATAC+CGG | - | chr8.2:81241657-81241676 | MS.gene39326:intron | 45.0% | |
| GTCCTGCCTCTTATAAGAGA+AGG | - | chr8.2:81242834-81242853 | MS.gene39326:CDS | 45.0% | |
| TATAGGCCAATCAATGCAGC+AGG | + | chr8.2:81242906-81242925 | None:intergenic | 45.0% | |
| TCACCAAGCGAACAAAGACA+TGG | + | chr8.2:81242101-81242120 | None:intergenic | 45.0% | |
| TGCAAGTGACTGTGTTGTGA+TGG | + | chr8.2:81242416-81242435 | None:intergenic | 45.0% | |
| TGTTTGAGTACAGGTATGCC+GGG | - | chr8.2:81241780-81241799 | MS.gene39326:intron | 45.0% | |
| ! | ATATAAGCGGATTCGGATCG+AGG | - | chr8.2:81242761-81242780 | MS.gene39326:CDS | 45.0% |
| ! | GCGAACAAAGACATGGATTG+TGG | + | chr8.2:81242094-81242113 | None:intergenic | 45.0% |
| ! | TATAAGCGGATTCGGATCGA+GGG | - | chr8.2:81242762-81242781 | MS.gene39326:CDS | 45.0% |
| AAGGACACTACTGCAGGACT+TGG | - | chr8.2:81241325-81241344 | MS.gene39326:CDS | 50.0% | |
| AAGTCCTGCAGTAGTGTCCT+TGG | + | chr8.2:81241326-81241345 | None:intergenic | 50.0% | |
| AGAGCATGGCATACAGAACC+AGG | + | chr8.2:81241361-81241380 | None:intergenic | 50.0% | |
| AGCATGGCATACAGAACCAG+GGG | + | chr8.2:81241359-81241378 | None:intergenic | 50.0% | |
| ATGACCAAGGACACTACTGC+AGG | - | chr8.2:81241319-81241338 | MS.gene39326:CDS | 50.0% | |
| CACTTACAGGTATACGGCCA+TGG | + | chr8.2:81242680-81242699 | None:intergenic | 50.0% | |
| CAGTAGTGTCCTTGGTCATC+AGG | + | chr8.2:81241318-81241337 | None:intergenic | 50.0% | |
| CATGAGACTCCTGATGACCA+AGG | - | chr8.2:81241306-81241325 | MS.gene39326:CDS | 50.0% | |
| CATGGCCGTATACCTGTAAG+TGG | - | chr8.2:81242678-81242697 | MS.gene39326:intron | 50.0% | |
| CCAGCATATGCAGTCATTCC+CGG | + | chr8.2:81241801-81241820 | None:intergenic | 50.0% | |
| GAGCATGGCATACAGAACCA+GGG | + | chr8.2:81241360-81241379 | None:intergenic | 50.0% | |
| GAGTAATTGCAGCCACTGAC+AGG | - | chr8.2:81241501-81241520 | MS.gene39326:CDS | 50.0% | |
| GATACTCCAAAGCCTGTCAG+TGG | + | chr8.2:81241516-81241535 | None:intergenic | 50.0% | |
| !! | GGTGCTGTTGGTCAACTTGT+TGG | - | chr8.2:81241879-81241898 | MS.gene39326:CDS | 50.0% |
| CCGGGAATGACTGCATATGC+TGG | - | chr8.2:81241798-81241817 | MS.gene39326:intron | 55.0% | |
| TTGCAGCCACTGACAGGCTT+TGG | - | chr8.2:81241507-81241526 | MS.gene39326:intron | 55.0% | |
| !! | TCAGCTGCATCTGGTGCTGT+TGG | - | chr8.2:81241867-81241886 | MS.gene39326:CDS | 55.0% |
| !! | GGACTTGGTGCTCTCACCCC+TGG | - | chr8.2:81241340-81241359 | MS.gene39326:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 81241142 | 81242974 | 81241142 | ID=MS.gene39326 |
| chr8.2 | mRNA | 81241142 | 81242974 | 81241142 | ID=MS.gene39326.t1;Parent=MS.gene39326 |
| chr8.2 | exon | 81242750 | 81242974 | 81242750 | ID=MS.gene39326.t1.exon1;Parent=MS.gene39326.t1 |
| chr8.2 | CDS | 81242750 | 81242974 | 81242750 | ID=cds.MS.gene39326.t1;Parent=MS.gene39326.t1 |
| chr8.2 | exon | 81242429 | 81242603 | 81242429 | ID=MS.gene39326.t1.exon2;Parent=MS.gene39326.t1 |
| chr8.2 | CDS | 81242429 | 81242603 | 81242429 | ID=cds.MS.gene39326.t1;Parent=MS.gene39326.t1 |
| chr8.2 | exon | 81242157 | 81242323 | 81242157 | ID=MS.gene39326.t1.exon3;Parent=MS.gene39326.t1 |
| chr8.2 | CDS | 81242157 | 81242323 | 81242157 | ID=cds.MS.gene39326.t1;Parent=MS.gene39326.t1 |
| chr8.2 | exon | 81241826 | 81241908 | 81241826 | ID=MS.gene39326.t1.exon4;Parent=MS.gene39326.t1 |
| chr8.2 | CDS | 81241826 | 81241908 | 81241826 | ID=cds.MS.gene39326.t1;Parent=MS.gene39326.t1 |
| chr8.2 | exon | 81241142 | 81241520 | 81241142 | ID=MS.gene39326.t1.exon5;Parent=MS.gene39326.t1 |
| chr8.2 | CDS | 81241142 | 81241520 | 81241142 | ID=cds.MS.gene39326.t1;Parent=MS.gene39326.t1 |
| Gene Sequence |
| Protein sequence |
