Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84014.t1 | XP_013467371.1 | 99.4 | 330 | 2 | 0 | 1 | 330 | 1 | 330 | 3.00E-191 | 677.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84014.t1 | P49730 | 85.5 | 330 | 47 | 1 | 1 | 330 | 1 | 329 | 2.4e-165 | 582.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84014.t1 | A0A072VJ25 | 99.4 | 330 | 2 | 0 | 1 | 330 | 1 | 330 | 2.2e-191 | 677.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene84014 | 0.807917 | 4.00E-50 | -1.69E-46 |
| MS.gene049596 | MS.gene84014 | 0.8164 | 5.64E-52 | -1.69E-46 |
| MS.gene049622 | MS.gene84014 | 0.839947 | 1.17E-57 | -1.69E-46 |
| MS.gene049989 | MS.gene84014 | 0.906458 | 1.45E-80 | -1.69E-46 |
| MS.gene050297 | MS.gene84014 | 0.878184 | 3.45E-69 | -1.69E-46 |
| MS.gene050648 | MS.gene84014 | 0.822712 | 2.05E-53 | -1.69E-46 |
| MS.gene051094 | MS.gene84014 | 0.819748 | 9.87E-53 | -1.69E-46 |
| MS.gene05124 | MS.gene84014 | 0.814564 | 1.44E-51 | -1.69E-46 |
| MS.gene051263 | MS.gene84014 | 0.876484 | 1.35E-68 | -1.69E-46 |
| MS.gene051629 | MS.gene84014 | 0.864082 | 1.57E-64 | -1.69E-46 |
| MS.gene051698 | MS.gene84014 | 0.802117 | 6.53E-49 | -1.69E-46 |
| MS.gene051742 | MS.gene84014 | 0.825541 | 4.43E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene84014 | 0.8321 | 1.15E-55 | -1.69E-46 |
| MS.gene051955 | MS.gene84014 | 0.839225 | 1.80E-57 | -1.69E-46 |
| MS.gene052143 | MS.gene84014 | 0.833771 | 4.40E-56 | -1.69E-46 |
| MS.gene052308 | MS.gene84014 | 0.801826 | 7.50E-49 | -1.69E-46 |
| MS.gene052367 | MS.gene84014 | 0.887427 | 1.44E-72 | -1.69E-46 |
| MS.gene053173 | MS.gene84014 | 0.844417 | 7.66E-59 | -1.69E-46 |
| MS.gene053348 | MS.gene84014 | 0.828348 | 9.45E-55 | -1.69E-46 |
| MS.gene053416 | MS.gene84014 | 0.868139 | 8.15E-66 | -1.69E-46 |
| MS.gene053417 | MS.gene84014 | 0.870393 | 1.51E-66 | -1.69E-46 |
| MS.gene05369 | MS.gene84014 | 0.822883 | 1.87E-53 | -1.69E-46 |
| MS.gene054551 | MS.gene84014 | 0.854568 | 1.13E-61 | -1.69E-46 |
| MS.gene054552 | MS.gene84014 | 0.821063 | 4.93E-53 | -1.69E-46 |
| MS.gene054593 | MS.gene84014 | 0.836012 | 1.20E-56 | -1.69E-46 |
| MS.gene054643 | MS.gene84014 | 0.844391 | 7.78E-59 | -1.69E-46 |
| MS.gene055308 | MS.gene84014 | 0.833459 | 5.27E-56 | -1.69E-46 |
| MS.gene055411 | MS.gene84014 | 0.813973 | 1.95E-51 | -1.69E-46 |
| MS.gene055578 | MS.gene84014 | 0.821135 | 4.74E-53 | -1.69E-46 |
| MS.gene055957 | MS.gene84014 | 0.884884 | 1.31E-71 | -1.69E-46 |
| MS.gene056041 | MS.gene84014 | 0.889969 | 1.50E-73 | -1.69E-46 |
| MS.gene056042 | MS.gene84014 | 0.847559 | 1.07E-59 | -1.69E-46 |
| MS.gene056335 | MS.gene84014 | 0.830128 | 3.50E-55 | -1.69E-46 |
| MS.gene05640 | MS.gene84014 | 0.826014 | 3.42E-54 | -1.69E-46 |
| MS.gene056526 | MS.gene84014 | 0.833915 | 4.05E-56 | -1.69E-46 |
| MS.gene057458 | MS.gene84014 | 0.859411 | 4.21E-63 | -1.69E-46 |
| MS.gene057483 | MS.gene84014 | 0.819325 | 1.23E-52 | -1.69E-46 |
| MS.gene058196 | MS.gene84014 | 0.850555 | 1.57E-60 | -1.69E-46 |
| MS.gene058197 | MS.gene84014 | 0.856734 | 2.63E-62 | -1.69E-46 |
| MS.gene058198 | MS.gene84014 | 0.859678 | 3.50E-63 | -1.69E-46 |
| MS.gene058818 | MS.gene84014 | 0.823794 | 1.14E-53 | -1.69E-46 |
| MS.gene058844 | MS.gene84014 | 0.8016 | 8.34E-49 | -1.69E-46 |
| MS.gene058853 | MS.gene84014 | 0.810351 | 1.20E-50 | -1.69E-46 |
| MS.gene059300 | MS.gene84014 | 0.876693 | 1.14E-68 | -1.69E-46 |
| MS.gene059553 | MS.gene84014 | 0.848688 | 5.22E-60 | -1.69E-46 |
| MS.gene060473 | MS.gene84014 | 0.883172 | 5.62E-71 | -1.69E-46 |
| MS.gene060565 | MS.gene84014 | 0.887466 | 1.39E-72 | -1.69E-46 |
| MS.gene06057 | MS.gene84014 | 0.857772 | 1.30E-62 | -1.69E-46 |
| MS.gene06093 | MS.gene84014 | 0.834135 | 3.57E-56 | -1.69E-46 |
| MS.gene061099 | MS.gene84014 | 0.844856 | 5.84E-59 | -1.69E-46 |
| MS.gene061260 | MS.gene84014 | 0.869928 | 2.14E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene84014 | MS.gene034044 | PPI |
| MS.gene79484 | MS.gene84014 | PPI |
| MS.gene84014 | MS.gene034046 | PPI |
| MS.gene37310 | MS.gene84014 | PPI |
| MS.gene026793 | MS.gene84014 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84014.t1 | MTR_1g050472 | 99.394 | 330 | 2 | 0 | 1 | 330 | 1 | 330 | 0.0 | 678 |
| MS.gene84014.t1 | MTR_0268s0080 | 96.970 | 330 | 10 | 0 | 1 | 330 | 1 | 330 | 0.0 | 667 |
| MS.gene84014.t1 | MTR_7g029110 | 96.061 | 330 | 13 | 0 | 1 | 330 | 1 | 330 | 0.0 | 641 |
| MS.gene84014.t1 | MTR_8g469010 | 92.727 | 330 | 19 | 1 | 1 | 330 | 1 | 325 | 0.0 | 634 |
| MS.gene84014.t1 | MTR_4g117370 | 76.308 | 325 | 76 | 1 | 6 | 330 | 18 | 341 | 0.0 | 532 |
| MS.gene84014.t1 | MTR_6g005270 | 67.442 | 43 | 14 | 0 | 265 | 307 | 25 | 67 | 1.63e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84014.t1 | AT3G27060 | 83.735 | 332 | 52 | 2 | 1 | 330 | 1 | 332 | 0.0 | 558 |
| MS.gene84014.t1 | AT3G23580 | 76.308 | 325 | 76 | 1 | 6 | 330 | 18 | 341 | 0.0 | 518 |
Find 61 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGAATCGGTCTGGGTTT+GGG | 0.237047 | 1.3:-32143902 | None:intergenic |
| TGCGCATTGGTTGGGATGAA+TGG | 0.293239 | 1.3:+32144605 | MS.gene84014:CDS |
| GATGGAATTGATTTCGCTTC+AGG | 0.300115 | 1.3:+32144724 | MS.gene84014:CDS |
| CGCTTCCTTGCGCATTGGTT+GGG | 0.302060 | 1.3:+32144597 | MS.gene84014:CDS |
| GTTTGTTGCTGATAGGTTAT+TGG | 0.303774 | 1.3:+32144652 | MS.gene84014:CDS |
| AGTGGCGTTCGCCGTCTGTT+AGG | 0.311051 | 1.3:-32144034 | None:intergenic |
| GGGGCAAGAAGGGGTTCTTC+TGG | 0.330658 | 1.3:-32143882 | None:intergenic |
| ATGCAGAATCGGTCTGGGTT+TGG | 0.338926 | 1.3:-32143903 | None:intergenic |
| GCGCATTGGTTGGGATGAAT+GGG | 0.350139 | 1.3:+32144606 | MS.gene84014:CDS |
| AAGCTGATTGGGCGATGAAA+TGG | 0.358474 | 1.3:+32144297 | MS.gene84014:CDS |
| ACAATTTCTTTCACGCGCTC+TGG | 0.374811 | 1.3:-32144533 | None:intergenic |
| TTTGTTGCTGATAGGTTATT+GGG | 0.379609 | 1.3:+32144653 | MS.gene84014:CDS |
| AATCGCTTATATACGTTTCA+AGG | 0.387103 | 1.3:-32144217 | None:intergenic |
| ATGTTCAGAATCCGTTTGAT+TGG | 0.390491 | 1.3:+32144702 | MS.gene84014:CDS |
| ACCGTAGAAGGCACGTGCTT+CGG | 0.402800 | 1.3:-32144147 | None:intergenic |
| GTCTGGGTTTGGGGCAAGAA+GGG | 0.415976 | 1.3:-32143892 | None:intergenic |
| GGGAACATGCAGAATCGGTC+TGG | 0.418807 | 1.3:-32143909 | None:intergenic |
| GCGCTTCCTTGCGCATTGGT+TGG | 0.429604 | 1.3:+32144596 | MS.gene84014:CDS |
| GATTTCTTTCATGAATCTAC+CGG | 0.435670 | 1.3:-32144117 | None:intergenic |
| GTTGCATTTGCTTGTGTTGA+AGG | 0.436600 | 1.3:+32144353 | MS.gene84014:CDS |
| TCTGTTATGAATAGCTTGAA+TGG | 0.443380 | 1.3:+32144794 | MS.gene84014:CDS |
| TCAGAATCCGTTTGATTGGA+TGG | 0.443597 | 1.3:+32144706 | MS.gene84014:CDS |
| TCTGGGTTTGGGGCAAGAAG+GGG | 0.444554 | 1.3:-32143891 | None:intergenic |
| AGGCACGTGCTTCGGAGACT+TGG | 0.444676 | 1.3:-32144139 | None:intergenic |
| GCCGTCGGAGGCGGCGAAGA+AGG | 0.452615 | 1.3:-32144075 | None:intergenic |
| GAAAATCGCACAGAAACTTC+CGG | 0.473049 | 1.3:-32144387 | None:intergenic |
| GAGGACGATGCCGTCGGAGG+CGG | 0.474359 | 1.3:-32144084 | None:intergenic |
| TGCAATCTGGAAACCGTAGA+AGG | 0.475411 | 1.3:-32144159 | None:intergenic |
| ATCAATTCCATCCAATCAAA+CGG | 0.480364 | 1.3:-32144713 | None:intergenic |
| CGACGCGCTTCCTTGCGCAT+TGG | 0.483293 | 1.3:+32144592 | MS.gene84014:CDS |
| GAGCTTATTTCACGTGATGA+AGG | 0.484978 | 1.3:+32144455 | MS.gene84014:CDS |
| TCCGAAGCACGTGCCTTCTA+CGG | 0.485174 | 1.3:+32144146 | MS.gene84014:CDS |
| GATAGGTTATTGGGTGAGCT+TGG | 0.486660 | 1.3:+32144662 | MS.gene84014:CDS |
| GGAACATGCAGAATCGGTCT+GGG | 0.489835 | 1.3:-32143908 | None:intergenic |
| CGCATTGGTTGGGATGAATG+GGG | 0.491773 | 1.3:+32144607 | MS.gene84014:CDS |
| ATATTGAGTTTGTTGCTGAT+AGG | 0.493329 | 1.3:+32144645 | MS.gene84014:CDS |
| ATGGAATTGATTTCGCTTCA+GGG | 0.495575 | 1.3:+32144725 | MS.gene84014:CDS |
| GTGATGCTGTTGAAATTGAA+AGG | 0.499878 | 1.3:+32144558 | MS.gene84014:CDS |
| AGGGGTTCTTCTGGAAAAGC+AGG | 0.505225 | 1.3:-32143873 | None:intergenic |
| GGGTGAGCTTGGTTGTGAAA+AGG | 0.505349 | 1.3:+32144673 | MS.gene84014:CDS |
| GCCTTCTTCGCCGCCTCCGA+CGG | 0.505987 | 1.3:+32144074 | MS.gene84014:CDS |
| GGTCTGGGTTTGGGGCAAGA+AGG | 0.509820 | 1.3:-32143893 | None:intergenic |
| TTCTTCTGCGGTCCAGAATG+AGG | 0.510696 | 1.3:-32143976 | None:intergenic |
| GGATTGGGAACATGCAGAAT+CGG | 0.521690 | 1.3:-32143914 | None:intergenic |
| GCAGAATCGGTCTGGGTTTG+GGG | 0.524980 | 1.3:-32143901 | None:intergenic |
| TGAAATAAGCTCGTTTGAGA+AGG | 0.538441 | 1.3:-32144444 | None:intergenic |
| TGATGCTGTTGAAATTGAAA+GGG | 0.545948 | 1.3:+32144559 | MS.gene84014:CDS |
| ATGAATAGCTTGAATGGTAA+TGG | 0.546534 | 1.3:+32144800 | MS.gene84014:CDS |
| TTTCCTCCGATCTCAAGCAC+TGG | 0.566756 | 1.3:+32144006 | MS.gene84014:CDS |
| TTCGAGGACGATGCCGTCGG+AGG | 0.583990 | 1.3:-32144087 | None:intergenic |
| CGAGGACGTGAGAGATGAAG+TGG | 0.584744 | 1.3:-32144052 | None:intergenic |
| TCGTTTGAGAAGGTTAATCC+CGG | 0.587906 | 1.3:-32144434 | None:intergenic |
| CGGAGGCGGCGAAGAAGGCG+AGG | 0.590500 | 1.3:-32144070 | None:intergenic |
| TGGAATTGATTTCGCTTCAG+GGG | 0.591747 | 1.3:+32144726 | MS.gene84014:CDS |
| GCATTGGTTGGGATGAATGG+GGG | 0.596821 | 1.3:+32144608 | MS.gene84014:CDS |
| TTCATCCCAACCAATGCGCA+AGG | 0.604485 | 1.3:-32144602 | None:intergenic |
| CACTGGCAAAACCTAACAGA+CGG | 0.606745 | 1.3:+32144023 | MS.gene84014:CDS |
| TTGCCAGTGCTTGAGATCGG+AGG | 0.610798 | 1.3:-32144009 | None:intergenic |
| ATCGTCCTCGAAAATCTCGC+CGG | 0.639774 | 1.3:+32144098 | MS.gene84014:CDS |
| GGAAAGATCGACTTCTTCTG+CGG | 0.673797 | 1.3:-32143988 | None:intergenic |
| GAAGAGAGTACATCTCAGAG+TGG | 0.694344 | 1.3:-32144193 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AACACGCTTCTCAAAAAAAT+TGG | - | chr1.3:32144756-32144775 | None:intergenic | 30.0% | |
| AATCCAATACCCAAAAATCT+GGG | + | chr1.3:32143932-32143951 | MS.gene84014:CDS | 30.0% | |
| AATCGCTTATATACGTTTCA+AGG | - | chr1.3:32144220-32144239 | None:intergenic | 30.0% | |
| ATCAATTCCATCCAATCAAA+CGG | - | chr1.3:32144716-32144735 | None:intergenic | 30.0% | |
| ATGAATAGCTTGAATGGTAA+TGG | + | chr1.3:32144800-32144819 | MS.gene84014:CDS | 30.0% | |
| GATTTCTTTCATGAATCTAC+CGG | - | chr1.3:32144120-32144139 | None:intergenic | 30.0% | |
| TCTGTTATGAATAGCTTGAA+TGG | + | chr1.3:32144794-32144813 | MS.gene84014:CDS | 30.0% | |
| TGATGCTGTTGAAATTGAAA+GGG | + | chr1.3:32144559-32144578 | MS.gene84014:CDS | 30.0% | |
| TTTGTTGCTGATAGGTTATT+GGG | + | chr1.3:32144653-32144672 | MS.gene84014:CDS | 30.0% | |
| ! | TGTACATTTCCCAGATTTTT+GGG | - | chr1.3:32143944-32143963 | None:intergenic | 30.0% |
| ! | TTGTACATTTCCCAGATTTT+TGG | - | chr1.3:32143945-32143964 | None:intergenic | 30.0% |
| !! | ATATTGAGTTTGTTGCTGAT+AGG | + | chr1.3:32144645-32144664 | MS.gene84014:CDS | 30.0% |
| !!! | AATTTTTTTGAGAAGCGTGT+TGG | + | chr1.3:32144755-32144774 | MS.gene84014:CDS | 30.0% |
| !!! | AGATTTTTGGGTATTGGATT+GGG | - | chr1.3:32143932-32143951 | None:intergenic | 30.0% |
| !!! | ATTTTCTGGTTGAAAAAACG+TGG | + | chr1.3:32144404-32144423 | MS.gene84014:CDS | 30.0% |
| !!! | ATTTTTTTGAGAAGCGTGTT+GGG | + | chr1.3:32144756-32144775 | MS.gene84014:CDS | 30.0% |
| AAAAAACGTGGTTTAATGCC+GGG | + | chr1.3:32144416-32144435 | MS.gene84014:CDS | 35.0% | |
| ATGTTCAGAATCCGTTTGAT+TGG | + | chr1.3:32144702-32144721 | MS.gene84014:CDS | 35.0% | |
| CAATCCAATACCCAAAAATC+TGG | + | chr1.3:32143931-32143950 | MS.gene84014:CDS | 35.0% | |
| GAAAAAACGTGGTTTAATGC+CGG | + | chr1.3:32144415-32144434 | MS.gene84014:CDS | 35.0% | |
| GTGATGCTGTTGAAATTGAA+AGG | + | chr1.3:32144558-32144577 | MS.gene84014:CDS | 35.0% | |
| TATCGCGAAAAAAGCTGATT+GGG | + | chr1.3:32144286-32144305 | MS.gene84014:CDS | 35.0% | |
| TGAAATAAGCTCGTTTGAGA+AGG | - | chr1.3:32144447-32144466 | None:intergenic | 35.0% | |
| ! | ATGGAATTGATTTCGCTTCA+GGG | + | chr1.3:32144725-32144744 | MS.gene84014:CDS | 35.0% |
| ! | GTTGAAGGAATCTTTTTCTC+CGG | + | chr1.3:32144368-32144387 | MS.gene84014:CDS | 35.0% |
| ! | GTTTGTTGCTGATAGGTTAT+TGG | + | chr1.3:32144652-32144671 | MS.gene84014:CDS | 35.0% |
| !!! | CAGATTTTTGGGTATTGGAT+TGG | - | chr1.3:32143933-32143952 | None:intergenic | 35.0% |
| !!! | TGCTGATTTTTGCTTCAAGT+TGG | + | chr1.3:32144826-32144845 | MS.gene84014:CDS | 35.0% |
| !!! | TTTCCCAGATTTTTGGGTAT+TGG | - | chr1.3:32143938-32143957 | None:intergenic | 35.0% |
| !!! | TTTTTTTGAGAAGCGTGTTG+GGG | + | chr1.3:32144757-32144776 | MS.gene84014:CDS | 35.0% |
| AAAAAGCTGAAGCCTCATTC+TGG | + | chr1.3:32143964-32143983 | MS.gene84014:CDS | 40.0% | |
| GAAAATCGCACAGAAACTTC+CGG | - | chr1.3:32144390-32144409 | None:intergenic | 40.0% | |
| GAGCTTATTTCACGTGATGA+AGG | + | chr1.3:32144455-32144474 | MS.gene84014:CDS | 40.0% | |
| GTATCGCGAAAAAAGCTGAT+TGG | + | chr1.3:32144285-32144304 | MS.gene84014:CDS | 40.0% | |
| GTTGCATTTGCTTGTGTTGA+AGG | + | chr1.3:32144353-32144372 | MS.gene84014:CDS | 40.0% | |
| TCAGAATCCGTTTGATTGGA+TGG | + | chr1.3:32144706-32144725 | MS.gene84014:CDS | 40.0% | |
| TCGTTTGAGAAGGTTAATCC+CGG | - | chr1.3:32144437-32144456 | None:intergenic | 40.0% | |
| ! | GAAGTTTCTGTGCGATTTTC+TGG | + | chr1.3:32144390-32144409 | MS.gene84014:CDS | 40.0% |
| ! | GATGGAATTGATTTCGCTTC+AGG | + | chr1.3:32144724-32144743 | MS.gene84014:CDS | 40.0% |
| ! | GGATGTTTTCGATTGCAATC+TGG | - | chr1.3:32144175-32144194 | None:intergenic | 40.0% |
| ! | TGGAATTGATTTCGCTTCAG+GGG | + | chr1.3:32144726-32144745 | MS.gene84014:CDS | 40.0% |
| !!! | TCAGCTTTTTTCGCGATACA+TGG | - | chr1.3:32144284-32144303 | None:intergenic | 40.0% |
| AAGCTGATTGGGCGATGAAA+TGG | + | chr1.3:32144297-32144316 | MS.gene84014:CDS | 45.0% | |
| ACAATTTCTTTCACGCGCTC+TGG | - | chr1.3:32144536-32144555 | None:intergenic | 45.0% | |
| CACTGGCAAAACCTAACAGA+CGG | + | chr1.3:32144023-32144042 | MS.gene84014:CDS | 45.0% | |
| GATAGGTTATTGGGTGAGCT+TGG | + | chr1.3:32144662-32144681 | MS.gene84014:CDS | 45.0% | |
| GGATTGGGAACATGCAGAAT+CGG | - | chr1.3:32143917-32143936 | None:intergenic | 45.0% | |
| TGCAATCTGGAAACCGTAGA+AGG | - | chr1.3:32144162-32144181 | None:intergenic | 45.0% | |
| ! | GAAGAGAGTACATCTCAGAG+TGG | - | chr1.3:32144196-32144215 | None:intergenic | 45.0% |
| ! | GGAAAGATCGACTTCTTCTG+CGG | - | chr1.3:32143991-32144010 | None:intergenic | 45.0% |
| ! | GTTTTGCCAGTGCTTGAGAT+CGG | - | chr1.3:32144015-32144034 | None:intergenic | 45.0% |
| ATCGTCCTCGAAAATCTCGC+CGG | + | chr1.3:32144098-32144117 | MS.gene84014:CDS | 50.0% | |
| ATGCAGAATCGGTCTGGGTT+TGG | - | chr1.3:32143906-32143925 | None:intergenic | 50.0% | |
| GGAACATGCAGAATCGGTCT+GGG | - | chr1.3:32143911-32143930 | None:intergenic | 50.0% | |
| GGGTGAGCTTGGTTGTGAAA+AGG | + | chr1.3:32144673-32144692 | MS.gene84014:CDS | 50.0% | |
| TGCAGAATCGGTCTGGGTTT+GGG | - | chr1.3:32143905-32143924 | None:intergenic | 50.0% | |
| TTCATCCCAACCAATGCGCA+AGG | - | chr1.3:32144605-32144624 | None:intergenic | 50.0% | |
| TTCTTCTGCGGTCCAGAATG+AGG | - | chr1.3:32143979-32143998 | None:intergenic | 50.0% | |
| TTTCCTCCGATCTCAAGCAC+TGG | + | chr1.3:32144006-32144025 | MS.gene84014:CDS | 50.0% | |
| ! | AGGGGTTCTTCTGGAAAAGC+AGG | - | chr1.3:32143876-32143895 | None:intergenic | 50.0% |
| ! | ATCTACCGGCGAGATTTTCG+AGG | - | chr1.3:32144106-32144125 | None:intergenic | 50.0% |
| !! | ATTTTCGAGGACGATGCCGT+CGG | - | chr1.3:32144093-32144112 | None:intergenic | 50.0% |
| !! | CGCATTGGTTGGGATGAATG+GGG | + | chr1.3:32144607-32144626 | MS.gene84014:CDS | 50.0% |
| !! | GCATTGGTTGGGATGAATGG+GGG | + | chr1.3:32144608-32144627 | MS.gene84014:CDS | 50.0% |
| !! | GCGCATTGGTTGGGATGAAT+GGG | + | chr1.3:32144606-32144625 | MS.gene84014:CDS | 50.0% |
| !! | TGCGCATTGGTTGGGATGAA+TGG | + | chr1.3:32144605-32144624 | MS.gene84014:CDS | 50.0% |
| CGAGGACGTGAGAGATGAAG+TGG | - | chr1.3:32144055-32144074 | None:intergenic | 55.0% | |
| GCAGAATCGGTCTGGGTTTG+GGG | - | chr1.3:32143904-32143923 | None:intergenic | 55.0% | |
| GGGAACATGCAGAATCGGTC+TGG | - | chr1.3:32143912-32143931 | None:intergenic | 55.0% | |
| TCCGAAGCACGTGCCTTCTA+CGG | + | chr1.3:32144146-32144165 | MS.gene84014:CDS | 55.0% | |
| TTGCCAGTGCTTGAGATCGG+AGG | - | chr1.3:32144012-32144031 | None:intergenic | 55.0% | |
| ! | ACCGTAGAAGGCACGTGCTT+CGG | - | chr1.3:32144150-32144169 | None:intergenic | 55.0% |
| ! | GTCTGGGTTTGGGGCAAGAA+GGG | - | chr1.3:32143895-32143914 | None:intergenic | 55.0% |
| ! | TCTGGGTTTGGGGCAAGAAG+GGG | - | chr1.3:32143894-32143913 | None:intergenic | 55.0% |
| !! | CGCTTCCTTGCGCATTGGTT+GGG | + | chr1.3:32144597-32144616 | MS.gene84014:CDS | 55.0% |
| AGGCACGTGCTTCGGAGACT+TGG | - | chr1.3:32144142-32144161 | None:intergenic | 60.0% | |
| AGTGGCGTTCGCCGTCTGTT+AGG | - | chr1.3:32144037-32144056 | None:intergenic | 60.0% | |
| GGGGCAAGAAGGGGTTCTTC+TGG | - | chr1.3:32143885-32143904 | None:intergenic | 60.0% | |
| ! | GCGCTTCCTTGCGCATTGGT+TGG | + | chr1.3:32144596-32144615 | MS.gene84014:CDS | 60.0% |
| ! | GGTCTGGGTTTGGGGCAAGA+AGG | - | chr1.3:32143896-32143915 | None:intergenic | 60.0% |
| CGACGCGCTTCCTTGCGCAT+TGG | + | chr1.3:32144592-32144611 | MS.gene84014:CDS | 65.0% | |
| TTCGAGGACGATGCCGTCGG+AGG | - | chr1.3:32144090-32144109 | None:intergenic | 65.0% | |
| GAGGACGATGCCGTCGGAGG+CGG | - | chr1.3:32144087-32144106 | None:intergenic | 70.0% | |
| GCCTTCTTCGCCGCCTCCGA+CGG | + | chr1.3:32144074-32144093 | MS.gene84014:CDS | 70.0% | |
| CGGAGGCGGCGAAGAAGGCG+AGG | - | chr1.3:32144073-32144092 | None:intergenic | 75.0% | |
| GCCGTCGGAGGCGGCGAAGA+AGG | - | chr1.3:32144078-32144097 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 32143870 | 32144862 | 32143870 | ID=MS.gene84014 |
| chr1.3 | mRNA | 32143870 | 32144862 | 32143870 | ID=MS.gene84014.t1;Parent=MS.gene84014 |
| chr1.3 | exon | 32143870 | 32144862 | 32143870 | ID=MS.gene84014.t1.exon1;Parent=MS.gene84014.t1 |
| chr1.3 | CDS | 32143870 | 32144862 | 32143870 | ID=cds.MS.gene84014.t1;Parent=MS.gene84014.t1 |
| Gene Sequence |
| Protein sequence |
