Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06236.t1 | XP_003602787.1 | 96.3 | 540 | 20 | 0 | 1 | 540 | 1 | 540 | 3.50E-290 | 1006.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06236.t1 | Q8W475 | 47.3 | 529 | 246 | 9 | 11 | 534 | 8 | 508 | 2.8e-118 | 427.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06236.t1 | G7J3D7 | 96.3 | 540 | 20 | 0 | 1 | 540 | 1 | 540 | 2.5e-290 | 1006.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene06236 | 0.840389 | 8.95E-58 | -1.69E-46 |
| MS.gene049255 | MS.gene06236 | 0.82663 | 2.44E-54 | -1.69E-46 |
| MS.gene049341 | MS.gene06236 | 0.840148 | 1.04E-57 | -1.69E-46 |
| MS.gene049382 | MS.gene06236 | 0.814248 | 1.70E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene06236 | 0.814217 | 1.72E-51 | -1.69E-46 |
| MS.gene049979 | MS.gene06236 | 0.809229 | 2.10E-50 | -1.69E-46 |
| MS.gene050020 | MS.gene06236 | 0.834507 | 2.88E-56 | -1.69E-46 |
| MS.gene050277 | MS.gene06236 | 0.805748 | 1.15E-49 | -1.69E-46 |
| MS.gene050384 | MS.gene06236 | 0.811976 | 5.35E-51 | -1.69E-46 |
| MS.gene050386 | MS.gene06236 | 0.807175 | 5.75E-50 | -1.69E-46 |
| MS.gene050689 | MS.gene06236 | 0.853864 | 1.80E-61 | -1.69E-46 |
| MS.gene050724 | MS.gene06236 | 0.800727 | 1.26E-48 | -1.69E-46 |
| MS.gene050807 | MS.gene06236 | 0.82551 | 4.51E-54 | -1.69E-46 |
| MS.gene050815 | MS.gene06236 | 0.811991 | 5.31E-51 | -1.69E-46 |
| MS.gene051243 | MS.gene06236 | 0.815593 | 8.54E-52 | -1.69E-46 |
| MS.gene051328 | MS.gene06236 | 0.858175 | 9.86E-63 | -1.69E-46 |
| MS.gene05157 | MS.gene06236 | 0.829362 | 5.37E-55 | -1.69E-46 |
| MS.gene051719 | MS.gene06236 | 0.809374 | 1.95E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene06236 | 0.830024 | 3.71E-55 | -1.69E-46 |
| MS.gene052133 | MS.gene06236 | 0.825812 | 3.82E-54 | -1.69E-46 |
| MS.gene05215 | MS.gene06236 | 0.810243 | 1.27E-50 | -1.69E-46 |
| MS.gene052286 | MS.gene06236 | 0.804386 | 2.21E-49 | -1.69E-46 |
| MS.gene052397 | MS.gene06236 | 0.812723 | 3.67E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene06236 | 0.822425 | 2.38E-53 | -1.69E-46 |
| MS.gene052611 | MS.gene06236 | 0.837375 | 5.40E-57 | -1.69E-46 |
| MS.gene052612 | MS.gene06236 | 0.801388 | 9.22E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene06236 | 0.832729 | 8.01E-56 | -1.69E-46 |
| MS.gene052863 | MS.gene06236 | 0.822664 | 2.10E-53 | -1.69E-46 |
| MS.gene052896 | MS.gene06236 | 0.808088 | 3.68E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene06236 | 0.838288 | 3.14E-57 | -1.69E-46 |
| MS.gene053226 | MS.gene06236 | 0.824427 | 8.12E-54 | -1.69E-46 |
| MS.gene053581 | MS.gene06236 | 0.800554 | 1.37E-48 | -1.69E-46 |
| MS.gene05364 | MS.gene06236 | 0.806108 | 9.65E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene06236 | 0.80105 | 1.08E-48 | -1.69E-46 |
| MS.gene05462 | MS.gene06236 | 0.806169 | 9.37E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene06236 | 0.803919 | 2.77E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene06236 | 0.916323 | 2.04E-85 | -1.69E-46 |
| MS.gene055891 | MS.gene06236 | 0.803684 | 3.10E-49 | -1.69E-46 |
| MS.gene056432 | MS.gene06236 | 0.824557 | 7.57E-54 | -1.69E-46 |
| MS.gene056553 | MS.gene06236 | 0.813207 | 2.88E-51 | -1.69E-46 |
| MS.gene056589 | MS.gene06236 | 0.809107 | 2.23E-50 | -1.69E-46 |
| MS.gene056760 | MS.gene06236 | 0.822502 | 2.29E-53 | -1.69E-46 |
| MS.gene057057 | MS.gene06236 | 0.819734 | 9.94E-53 | -1.69E-46 |
| MS.gene057060 | MS.gene06236 | 0.81955 | 1.10E-52 | -1.69E-46 |
| MS.gene057140 | MS.gene06236 | 0.823162 | 1.61E-53 | -1.69E-46 |
| MS.gene057444 | MS.gene06236 | 0.812439 | 4.24E-51 | -1.69E-46 |
| MS.gene057446 | MS.gene06236 | 0.820397 | 7.01E-53 | -1.69E-46 |
| MS.gene057693 | MS.gene06236 | 0.811659 | 6.27E-51 | -1.69E-46 |
| MS.gene057869 | MS.gene06236 | 0.804101 | 2.54E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene06236 | 0.827982 | 1.16E-54 | -1.69E-46 |
| MS.gene058216 | MS.gene06236 | 0.81118 | 7.97E-51 | -1.69E-46 |
| MS.gene058906 | MS.gene06236 | 0.819123 | 1.37E-52 | -1.69E-46 |
| MS.gene058982 | MS.gene06236 | 0.806568 | 7.72E-50 | -1.69E-46 |
| MS.gene05978 | MS.gene06236 | 0.868908 | 4.60E-66 | -1.69E-46 |
| MS.gene059842 | MS.gene06236 | 0.807155 | 5.80E-50 | -1.69E-46 |
| MS.gene059937 | MS.gene06236 | 0.815399 | 9.43E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene06236 | 0.811475 | 6.87E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene06236 | 0.826367 | 2.82E-54 | -1.69E-46 |
| MS.gene060803 | MS.gene06236 | 0.82296 | 1.79E-53 | -1.69E-46 |
| MS.gene061176 | MS.gene06236 | 0.800066 | 1.72E-48 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06236.t1 | MTR_3g099000 | 96.296 | 540 | 20 | 0 | 1 | 540 | 1 | 540 | 0.0 | 1071 |
| MS.gene06236.t1 | MTR_3g116120 | 28.409 | 528 | 258 | 12 | 9 | 524 | 50 | 469 | 2.98e-56 | 196 |
| MS.gene06236.t1 | MTR_5g085170 | 27.324 | 527 | 245 | 11 | 7 | 524 | 22 | 419 | 1.31e-49 | 177 |
| MS.gene06236.t1 | MTR_3g088480 | 27.072 | 543 | 325 | 15 | 15 | 525 | 170 | 673 | 5.28e-44 | 167 |
| MS.gene06236.t1 | MTR_4g069830 | 28.920 | 287 | 174 | 5 | 16 | 290 | 139 | 407 | 1.32e-30 | 127 |
| MS.gene06236.t1 | MTR_4g069830 | 28.920 | 287 | 174 | 5 | 16 | 290 | 139 | 407 | 1.33e-30 | 127 |
| MS.gene06236.t1 | MTR_6g053260 | 43.860 | 114 | 58 | 1 | 2 | 115 | 17 | 124 | 2.24e-22 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06236.t1 | AT2G47620 | 49.723 | 541 | 232 | 12 | 1 | 534 | 1 | 508 | 2.13e-151 | 444 |
| MS.gene06236.t1 | AT2G47620 | 51.090 | 413 | 167 | 9 | 1 | 410 | 1 | 381 | 4.37e-120 | 360 |
| MS.gene06236.t1 | AT2G33610 | 26.336 | 524 | 281 | 11 | 7 | 527 | 39 | 460 | 6.38e-52 | 184 |
| MS.gene06236.t1 | AT1G21700 | 27.462 | 528 | 328 | 17 | 15 | 527 | 175 | 662 | 1.09e-46 | 175 |
| MS.gene06236.t1 | AT4G34430 | 27.027 | 296 | 177 | 4 | 15 | 295 | 144 | 415 | 1.53e-26 | 115 |
| MS.gene06236.t1 | AT4G34430 | 27.027 | 296 | 177 | 4 | 15 | 295 | 144 | 415 | 1.57e-26 | 115 |
| MS.gene06236.t1 | AT4G34430 | 27.027 | 296 | 177 | 4 | 15 | 295 | 144 | 415 | 1.57e-26 | 115 |
| MS.gene06236.t1 | AT4G34430 | 27.027 | 296 | 177 | 4 | 15 | 295 | 144 | 415 | 1.63e-26 | 115 |
Find 117 sgRNAs with CRISPR-Local
Find 432 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATATTCTTTGTAGATTT+TGG | 0.062137 | 3.1:-78886870 | None:intergenic |
| GAAATAGGCTTCAACGAATT+TGG | 0.175854 | 3.1:-78887142 | None:intergenic |
| TCGAGTTCTGAATCTGAAAT+TGG | 0.191544 | 3.1:-78886661 | None:intergenic |
| GATAACAGTAATAGTGTTAT+TGG | 0.230476 | 3.1:+78888812 | MS.gene06236:CDS |
| AACTCATTGAGCTGCCCTTT+GGG | 0.243008 | 3.1:+78888759 | MS.gene06236:CDS |
| GTTCAATCTCTCTATCTTCT+TGG | 0.261575 | 3.1:-78891612 | None:intergenic |
| CACTATTACTGTTATCATTT+CGG | 0.270449 | 3.1:-78888805 | None:intergenic |
| CCTGTGTCATTGAAGTTTCT+TGG | 0.272832 | 3.1:-78888880 | None:intergenic |
| CTGCCATTGGAACGGCTCTT+GGG | 0.282371 | 3.1:+78891557 | MS.gene06236:CDS |
| GTATCCCGCGGCAACGAAAT+AGG | 0.302183 | 3.1:-78887157 | None:intergenic |
| CCCTTTGGGGAGCTCATGTT+AGG | 0.346283 | 3.1:+78888773 | MS.gene06236:CDS |
| GCTGCCATTGGAACGGCTCT+TGG | 0.353657 | 3.1:+78891556 | MS.gene06236:CDS |
| ATGGTGGTAGTGCTGGGAGC+GGG | 0.366820 | 3.1:+78887191 | MS.gene06236:CDS |
| TGTGGTGATAAATGTGGTTC+TGG | 0.370702 | 3.1:+78887298 | MS.gene06236:CDS |
| AAACTCATTGAGCTGCCCTT+TGG | 0.381346 | 3.1:+78888758 | MS.gene06236:CDS |
| GTTGAGGAAGGTGCTCCTAA+TGG | 0.394494 | 3.1:+78887100 | MS.gene06236:CDS |
| GCATCGTATTCAGATGTTTA+CGG | 0.394898 | 3.1:+78887238 | MS.gene06236:CDS |
| CGCCTTCTGCTGGTGACGGT+GGG | 0.398334 | 3.1:+78887035 | MS.gene06236:CDS |
| GGTAGTGCTGGGAGCGGGGT+TGG | 0.399459 | 3.1:+78887196 | MS.gene06236:CDS |
| TGAATGAAAATCCTTCAAAA+AGG | 0.402501 | 3.1:+78888951 | MS.gene06236:CDS |
| TTAAATCTGGTGTCGCTAGA+TGG | 0.405889 | 3.1:+78891922 | MS.gene06236:CDS |
| GCTGCAGCAGCTGTGATATG+AGG | 0.409519 | 3.1:-78889498 | None:intergenic |
| AGCAACTATAATTGATGCTC+AGG | 0.419562 | 3.1:+78891642 | MS.gene06236:CDS |
| AACAGAGAAAGCCGCATTCA+AGG | 0.419615 | 3.1:+78886814 | MS.gene06236:CDS |
| TGCTGGTGACGGTGGGGAAG+CGG | 0.423290 | 3.1:+78887042 | MS.gene06236:CDS |
| GTGAATGTTAACCTTCTAGA+AGG | 0.426633 | 3.1:-78886923 | None:intergenic |
| CTGCTTCATTAGTGAACTGC+TGG | 0.426983 | 3.1:-78888999 | None:intergenic |
| ATTGCTGATGGTGGTAGTGC+TGG | 0.428983 | 3.1:+78887184 | MS.gene06236:CDS |
| GGAGAAGGAACACGCTGAAA+TGG | 0.429061 | 3.1:+78891845 | MS.gene06236:CDS |
| CGAGTTCTGAATCTGAAATT+GGG | 0.442640 | 3.1:-78886660 | None:intergenic |
| TTGAGGAAGGTGCTCCTAAT+GGG | 0.445261 | 3.1:+78887101 | MS.gene06236:CDS |
| GTGCCAACCACAGTGCTGTC+TGG | 0.448500 | 3.1:+78888627 | MS.gene06236:CDS |
| AGAGGAGCGGTGTAAGTTGA+AGG | 0.454875 | 3.1:+78887078 | MS.gene06236:CDS |
| TGATTTGATTCGACGTAAAG+AGG | 0.456139 | 3.1:+78887261 | MS.gene06236:CDS |
| AACTACGGTGCGCCTTCTGC+TGG | 0.458132 | 3.1:+78887025 | MS.gene06236:CDS |
| GCAACAACACGAATCCCATT+AGG | 0.458762 | 3.1:-78887115 | None:intergenic |
| TGACGGTGGGGAAGCGGAGA+AGG | 0.465624 | 3.1:+78887048 | MS.gene06236:CDS |
| GAACAATGGAAACAAAGTTC+AGG | 0.466829 | 3.1:+78888841 | MS.gene06236:CDS |
| AACCCCAACGCTCCAAGAAA+AGG | 0.466969 | 3.1:-78886997 | None:intergenic |
| TCAACATCAAATATATCCCT+TGG | 0.467931 | 3.1:-78889561 | None:intergenic |
| ATCGCGAAGAACCTTCTAGA+AGG | 0.477685 | 3.1:+78886912 | MS.gene06236:CDS |
| GATGGTGGTAGTGCTGGGAG+CGG | 0.482401 | 3.1:+78887190 | MS.gene06236:CDS |
| GTCAGGGCTCTCGAGGCTGA+AGG | 0.483976 | 3.1:+78889723 | MS.gene06236:intron |
| CATTGAAGTTTCTTGGTGAT+CGG | 0.484104 | 3.1:-78888873 | None:intergenic |
| ACGGGAATTATGGGGAGAAA+AGG | 0.485836 | 3.1:+78888564 | MS.gene06236:CDS |
| TTGCGGAAGACATTTAAATC+TGG | 0.491955 | 3.1:+78891909 | MS.gene06236:CDS |
| CGTTGGGGTTTGATTAACTA+CGG | 0.494430 | 3.1:+78887010 | MS.gene06236:CDS |
| AATACATTCAAGTTTAGTCT+TGG | 0.497563 | 3.1:-78888732 | None:intergenic |
| GTGGAGGGGTCCACTCAATC+AGG | 0.498019 | 3.1:+78889756 | MS.gene06236:CDS |
| TGCTGCACGAGCAAAGTTGT+TGG | 0.507153 | 3.1:+78891585 | MS.gene06236:CDS |
| CACAGTGCTGTCTGGACTGA+GGG | 0.511681 | 3.1:+78888635 | MS.gene06236:CDS |
| AGTGCTTACTGGAAGAGCTT+GGG | 0.513344 | 3.1:-78886696 | None:intergenic |
| ATTTAATTTGAAATCCTCCA+TGG | 0.517576 | 3.1:-78888588 | None:intergenic |
| GAGTGCTTACTGGAAGAGCT+TGG | 0.522921 | 3.1:-78886697 | None:intergenic |
| CAGCAGTTCACTAATGAAGC+AGG | 0.523188 | 3.1:+78889000 | MS.gene06236:CDS |
| GCGCCTTCTGCTGGTGACGG+TGG | 0.524490 | 3.1:+78887034 | MS.gene06236:CDS |
| TGGTGTTAAAATTGCGCCGT+TGG | 0.524858 | 3.1:+78887216 | MS.gene06236:CDS |
| CGACGTAAAGAGGTCAATTG+TGG | 0.526288 | 3.1:+78887271 | MS.gene06236:CDS |
| GACGTAAAGAGGTCAATTGT+GGG | 0.526317 | 3.1:+78887272 | MS.gene06236:CDS |
| CAACATCAAATATATCCCTT+GGG | 0.527017 | 3.1:-78889560 | None:intergenic |
| TGCCATTGGAACGGCTCTTG+GGG | 0.528099 | 3.1:+78891558 | MS.gene06236:CDS |
| GCTCTTATACGTAGTGTCAA+TGG | 0.528104 | 3.1:-78891535 | None:intergenic |
| GAAGCCTATTTCGTTGCCGC+GGG | 0.539844 | 3.1:+78887153 | MS.gene06236:CDS |
| TGGTGGTAGTGCTGGGAGCG+GGG | 0.541162 | 3.1:+78887192 | MS.gene06236:CDS |
| GTGATGAGAATTCGCTCCCA+AGG | 0.542135 | 3.1:+78889544 | MS.gene06236:CDS |
| TGCACGAGCAAAGTTGTTGG+CGG | 0.551025 | 3.1:+78891588 | MS.gene06236:CDS |
| GGTTGAGAAGTTGCAACAGA+AGG | 0.551352 | 3.1:+78891791 | MS.gene06236:intron |
| TGAAGGTTTAGAGATGGTGG+AGG | 0.556011 | 3.1:+78889740 | MS.gene06236:CDS |
| GGATATATTTGATGTTGAAG+AGG | 0.561648 | 3.1:+78889566 | MS.gene06236:CDS |
| AGCGGAGAAGGAACATGAAG+AGG | 0.562741 | 3.1:+78887060 | MS.gene06236:CDS |
| GCGGTGTAAGTTGAAGGTTG+AGG | 0.565042 | 3.1:+78887084 | MS.gene06236:CDS |
| CTGCAGCAGCTGTGATATGA+GGG | 0.565802 | 3.1:-78889497 | None:intergenic |
| ACTCATTGAGCTGCCCTTTG+GGG | 0.569298 | 3.1:+78888760 | MS.gene06236:CDS |
| GGCTGAAGGTTTAGAGATGG+TGG | 0.570333 | 3.1:+78889737 | MS.gene06236:CDS |
| AGCCCCAAGAGCCGTTCCAA+TGG | 0.577527 | 3.1:-78891560 | None:intergenic |
| CCTAACATGAGCTCCCCAAA+GGG | 0.577653 | 3.1:-78888773 | None:intergenic |
| GCCTTCTGCTGGTGACGGTG+GGG | 0.578188 | 3.1:+78887036 | MS.gene06236:CDS |
| TGACGTCACTTTCTTGAACA+AGG | 0.580657 | 3.1:+78886970 | MS.gene06236:CDS |
| GAAGGTTTAGAGATGGTGGA+GGG | 0.582672 | 3.1:+78889741 | MS.gene06236:CDS |
| TCCCCACCGTCACCAGCAGA+AGG | 0.584174 | 3.1:-78887037 | None:intergenic |
| CTACGTATAAGAGCTGCCAT+TGG | 0.589808 | 3.1:+78891544 | MS.gene06236:CDS |
| AAGATTCTATCTTAACTGAA+CGG | 0.593295 | 3.1:+78891877 | MS.gene06236:CDS |
| TATCTTTGTCAGGGCTCTCG+AGG | 0.594795 | 3.1:+78889716 | MS.gene06236:intron |
| TTGCTGATGGTGGTAGTGCT+GGG | 0.596207 | 3.1:+78887185 | MS.gene06236:CDS |
| GGTGCGCCTTCTGCTGGTGA+CGG | 0.597438 | 3.1:+78887031 | MS.gene06236:CDS |
| GTTATTGGCATTGTGAACAA+TGG | 0.599163 | 3.1:+78888827 | MS.gene06236:CDS |
| TGATGAGAATTCGCTCCCAA+GGG | 0.601664 | 3.1:+78889545 | MS.gene06236:CDS |
| TGAAGCCTATTTCGTTGCCG+CGG | 0.604522 | 3.1:+78887152 | MS.gene06236:CDS |
| CGAGGCTGAAGGTTTAGAGA+TGG | 0.605211 | 3.1:+78889734 | MS.gene06236:CDS |
| GAAGGAACACGCTGAAATGG+AGG | 0.607476 | 3.1:+78891848 | MS.gene06236:CDS |
| GCCTAACATGAGCTCCCCAA+AGG | 0.608377 | 3.1:-78888774 | None:intergenic |
| CCAAGAAACTTCAATGACAC+AGG | 0.608710 | 3.1:+78888880 | MS.gene06236:CDS |
| TGGACATTACCGAAGTAGCA+AGG | 0.608925 | 3.1:+78887318 | MS.gene06236:CDS |
| TTTGAAGCATGGGGATGACT+GGG | 0.610350 | 3.1:+78888685 | MS.gene06236:CDS |
| GGTGGGACTGCTCTCAACTG+TGG | 0.615676 | 3.1:+78889470 | MS.gene06236:intron |
| GAGGTCAATTGTGGGAATTG+TGG | 0.618187 | 3.1:+78887280 | MS.gene06236:CDS |
| TATAAGAGCTGCCATTGGAA+CGG | 0.624681 | 3.1:+78891549 | MS.gene06236:CDS |
| GCATTCAAGGAGTATTTCGA+CGG | 0.625023 | 3.1:+78886827 | MS.gene06236:CDS |
| CGGGATACGAAGATTGCTGA+TGG | 0.626607 | 3.1:+78887172 | MS.gene06236:CDS |
| CCACAGTGCTGTCTGGACTG+AGG | 0.629638 | 3.1:+78888634 | MS.gene06236:CDS |
| TTATGGGGAGAAAAGGTCCA+TGG | 0.637503 | 3.1:+78888571 | MS.gene06236:CDS |
| GGGAATTGTGGTGATAAATG+TGG | 0.639547 | 3.1:+78887292 | MS.gene06236:CDS |
| AGTCCAGACAGCACTGTGGT+TGG | 0.642832 | 3.1:-78888630 | None:intergenic |
| TGTAAGTTGAAGGTTGAGGA+AGG | 0.646841 | 3.1:+78887088 | MS.gene06236:CDS |
| AGAAGGAACATGAAGAGGAG+CGG | 0.666643 | 3.1:+78887065 | MS.gene06236:CDS |
| GATACGAAGATTGCTGATGG+TGG | 0.670531 | 3.1:+78887175 | MS.gene06236:CDS |
| ACATCTGAATACGATGCCAA+CGG | 0.670745 | 3.1:-78887232 | None:intergenic |
| GTCGAAATACTCCTTGAATG+CGG | 0.672398 | 3.1:-78886825 | None:intergenic |
| CTGAACGGATTGATGTGTTG+CGG | 0.676867 | 3.1:+78891892 | MS.gene06236:CDS |
| TCAGCAATCTTCGTATCCCG+CGG | 0.680115 | 3.1:-78887169 | None:intergenic |
| CTTACTGGAAGAGCTTGGGA+TGG | 0.682997 | 3.1:-78886692 | None:intergenic |
| AAGAGGATAATGCTTCAGCA+AGG | 0.686587 | 3.1:+78889583 | MS.gene06236:CDS |
| GAGGTACGAAAATCACTCGT+CGG | 0.686796 | 3.1:+78886947 | MS.gene06236:CDS |
| CCTCAGTCCAGACAGCACTG+TGG | 0.692166 | 3.1:-78888634 | None:intergenic |
| AAGGTTTAGAGATGGTGGAG+GGG | 0.704288 | 3.1:+78889742 | MS.gene06236:CDS |
| TGGGGAGAAAAGGTCCATGG+AGG | 0.741307 | 3.1:+78888574 | MS.gene06236:CDS |
| TAGAAGGTTAACATTCACCG+AGG | 0.759653 | 3.1:+78886928 | MS.gene06236:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTATTGTTTAAATAGA+AGG | + | chr3.1:78887406-78887425 | MS.gene06236:intron | 10.0% |
| !! | TTATATGTTAATATATGTTA+TGG | + | chr3.1:78887358-78887377 | MS.gene06236:intron | 10.0% |
| !!! | AATCAAAGTAATTTTTTAAT+TGG | + | chr3.1:78887459-78887478 | MS.gene06236:intron | 10.0% |
| !!! | ATCAAAGTAATTTTTTAATT+GGG | + | chr3.1:78887460-78887479 | MS.gene06236:intron | 10.0% |
| !! | AAATTATGAACATAACATAA+AGG | - | chr3.1:78889050-78889069 | None:intergenic | 15.0% |
| !! | AAGTTAAAATAATAAAACCT+TGG | + | chr3.1:78890692-78890711 | MS.gene06236:intron | 15.0% |
| !! | CTTATTCTCAAATATTAAAA+GGG | - | chr3.1:78889378-78889397 | None:intergenic | 15.0% |
| !! | TACAATATCGATAAAAAAAT+TGG | + | chr3.1:78887525-78887544 | MS.gene06236:intron | 15.0% |
| !! | TTAAAAAAATCTTTGGTAAA+GGG | - | chr3.1:78890824-78890843 | None:intergenic | 15.0% |
| !!! | AAGGTTTTATTATTTTAACT+TGG | - | chr3.1:78890693-78890712 | None:intergenic | 15.0% |
| !!! | ACATTTATTTTACTCAAATT+TGG | + | chr3.1:78887785-78887804 | MS.gene06236:intron | 15.0% |
| !!! | ATAAGGATTTTATAAATTGA+AGG | - | chr3.1:78889687-78889706 | None:intergenic | 15.0% |
| !!! | CTTTTAATATTTGAGAATAA+GGG | + | chr3.1:78889377-78889396 | MS.gene06236:intron | 15.0% |
| !!! | TGTTCATAATTTTTCATATT+TGG | + | chr3.1:78889058-78889077 | MS.gene06236:intron | 15.0% |
| !!! | TTTTAATATTTGAGAATAAG+GGG | + | chr3.1:78889378-78889397 | MS.gene06236:intron | 15.0% |
| !! | AAAAGAAAAGTAAGAAAGAA+AGG | + | chr3.1:78891304-78891323 | MS.gene06236:intron | 20.0% |
| !! | AAAATAAATTTGCATTTGCT+TGG | + | chr3.1:78888205-78888224 | MS.gene06236:intron | 20.0% |
| !! | AAGATTGTAATAACTATGTT+TGG | + | chr3.1:78891422-78891441 | MS.gene06236:intron | 20.0% |
| !! | AGAATTTATGAAGAAAAACA+TGG | - | chr3.1:78890261-78890280 | None:intergenic | 20.0% |
| !! | AGATTGTAATAACTATGTTT+GGG | + | chr3.1:78891423-78891442 | MS.gene06236:intron | 20.0% |
| !! | ATGTGTTAATTAACAAAGTT+AGG | - | chr3.1:78886738-78886757 | None:intergenic | 20.0% |
| !! | ATTGTTCGTTAAAGTTAATT+AGG | + | chr3.1:78888052-78888071 | MS.gene06236:intron | 20.0% |
| !! | ATTGTTTAAATAGAAGGATT+TGG | + | chr3.1:78887412-78887431 | MS.gene06236:intron | 20.0% |
| !! | CAAAGATAATAACAAGTATA+AGG | - | chr3.1:78889704-78889723 | None:intergenic | 20.0% |
| !! | CCTTATTCTCAAATATTAAA+AGG | - | chr3.1:78889379-78889398 | None:intergenic | 20.0% |
| !! | CTTTGATGTATTTAAATTTC+TGG | + | chr3.1:78891253-78891272 | MS.gene06236:intron | 20.0% |
| !! | GAAGAGTAATATTAAGAATT+TGG | - | chr3.1:78890384-78890403 | None:intergenic | 20.0% |
| !! | GAATTTATGAAGAAAAACAT+GGG | - | chr3.1:78890260-78890279 | None:intergenic | 20.0% |
| !! | GTTAAAAAAATCTTTGGTAA+AGG | - | chr3.1:78890825-78890844 | None:intergenic | 20.0% |
| !! | GTTTGGTTAAACAATTTATA+GGG | + | chr3.1:78887737-78887756 | MS.gene06236:intron | 20.0% |
| !! | TATATTTGAATCTATCAAGA+AGG | + | chr3.1:78889121-78889140 | MS.gene06236:intron | 20.0% |
| !! | TATTCATGAAATATACAGAT+GGG | - | chr3.1:78890855-78890874 | None:intergenic | 20.0% |
| !! | TCAATATCTTTGATGAAAAT+TGG | + | chr3.1:78891280-78891299 | MS.gene06236:intron | 20.0% |
| !! | TGTGTTAATTAACAAAGTTA+GGG | - | chr3.1:78886737-78886756 | None:intergenic | 20.0% |
| !! | TGTTTGGTTAAACAATTTAT+AGG | + | chr3.1:78887736-78887755 | MS.gene06236:intron | 20.0% |
| !! | TTAAACAATTTATAGGGAAT+GGG | + | chr3.1:78887743-78887762 | MS.gene06236:intron | 20.0% |
| !! | TTAACACATTACAATCTAAA+CGG | + | chr3.1:78886749-78886768 | MS.gene06236:intron | 20.0% |
| !! | TTATTCATGAAATATACAGA+TGG | - | chr3.1:78890856-78890875 | None:intergenic | 20.0% |
| !! | TTGTTCGTTAAAGTTAATTA+GGG | + | chr3.1:78888053-78888072 | MS.gene06236:intron | 20.0% |
| !! | TTTAAATACATCAAAGTTGT+TGG | - | chr3.1:78891249-78891268 | None:intergenic | 20.0% |
| !!! | AAAGTAGAGATGATTTTAAT+GGG | - | chr3.1:78887953-78887972 | None:intergenic | 20.0% |
| !!! | AAGAATATTGTTAAGTTTTG+CGG | - | chr3.1:78889829-78889848 | None:intergenic | 20.0% |
| !!! | AAGGTATTAAAAACAGAAAA+AGG | - | chr3.1:78890794-78890813 | None:intergenic | 20.0% |
| !!! | CATTTTAGGTAAGAAAATTT+AGG | - | chr3.1:78887876-78887895 | None:intergenic | 20.0% |
| !!! | CCTTTTAATATTTGAGAATA+AGG | + | chr3.1:78889376-78889395 | MS.gene06236:intron | 20.0% |
| !!! | CTACTATGTTTTTTTACAAT+GGG | - | chr3.1:78889978-78889997 | None:intergenic | 20.0% |
| !!! | CTATATTCTTTGTAGATTTT+GGG | - | chr3.1:78886872-78886891 | None:intergenic | 20.0% |
| !!! | TCTACTATGTTTTTTTACAA+TGG | - | chr3.1:78889979-78889998 | None:intergenic | 20.0% |
| !!! | TCTATATTCTTTGTAGATTT+TGG | - | chr3.1:78886873-78886892 | None:intergenic | 20.0% |
| ! | AAATCGAAAAACTAATGACA+TGG | - | chr3.1:78888458-78888477 | None:intergenic | 25.0% |
| ! | AAATGGTCTATCAATAAACA+TGG | + | chr3.1:78890146-78890165 | MS.gene06236:intron | 25.0% |
| ! | AACAGAGCAAGAAAATAAAT+AGG | + | chr3.1:78891192-78891211 | MS.gene06236:intron | 25.0% |
| ! | AAGATTCTATCTTAACTGAA+CGG | + | chr3.1:78891877-78891896 | MS.gene06236:CDS | 25.0% |
| ! | AATAAAAATACCTGATTGAG+TGG | - | chr3.1:78889769-78889788 | None:intergenic | 25.0% |
| ! | AATAGGAACAAAGAATTCAA+AGG | + | chr3.1:78890747-78890766 | MS.gene06236:intron | 25.0% |
| ! | ACAGAGCAAGAAAATAAATA+GGG | + | chr3.1:78891193-78891212 | MS.gene06236:intron | 25.0% |
| ! | AGATAAAATCCACATGAAAA+AGG | - | chr3.1:78889093-78889112 | None:intergenic | 25.0% |
| ! | ATCGATAAAAAAATTGGAGA+AGG | + | chr3.1:78887531-78887550 | MS.gene06236:intron | 25.0% |
| ! | ATTTAATAACTCGCATTTGA+GGG | - | chr3.1:78889880-78889899 | None:intergenic | 25.0% |
| ! | ATTTGAATAATACCGCTATA+AGG | - | chr3.1:78890544-78890563 | None:intergenic | 25.0% |
| ! | CAATAAACATGGTTTATGAT+AGG | + | chr3.1:78890157-78890176 | MS.gene06236:intron | 25.0% |
| ! | CACTATTACTGTTATCATTT+CGG | - | chr3.1:78888808-78888827 | None:intergenic | 25.0% |
| ! | GATAACAGTAATAGTGTTAT+TGG | + | chr3.1:78888812-78888831 | MS.gene06236:CDS | 25.0% |
| ! | GTCTAGGTTAAAAAAATCTT+TGG | - | chr3.1:78890831-78890850 | None:intergenic | 25.0% |
| ! | GTTAAACAATTTATAGGGAA+TGG | + | chr3.1:78887742-78887761 | MS.gene06236:intron | 25.0% |
| ! | GTTGACAAATTATAACATGA+AGG | + | chr3.1:78890892-78890911 | MS.gene06236:intron | 25.0% |
| ! | TAAAAGAAGTAAACAACAAC+TGG | - | chr3.1:78889622-78889641 | None:intergenic | 25.0% |
| ! | TAAAATGAGGTTTAAGTAAG+TGG | + | chr3.1:78890431-78890450 | MS.gene06236:intron | 25.0% |
| ! | TACCTAAAATGTAACAAGAA+AGG | + | chr3.1:78887885-78887904 | MS.gene06236:intron | 25.0% |
| ! | TATTTAATAACTCGCATTTG+AGG | - | chr3.1:78889881-78889900 | None:intergenic | 25.0% |
| ! | TCAATACTTAGAAGATTCAT+CGG | + | chr3.1:78890404-78890423 | MS.gene06236:intron | 25.0% |
| ! | TCATGAATAAATTCATGACA+AGG | + | chr3.1:78890866-78890885 | MS.gene06236:intron | 25.0% |
| ! | TGAATGAAAATCCTTCAAAA+AGG | + | chr3.1:78888951-78888970 | MS.gene06236:CDS | 25.0% |
| !! | AACCTTTCTTGTTACATTTT+AGG | - | chr3.1:78887890-78887909 | None:intergenic | 25.0% |
| !! | AATACATTCAAGTTTAGTCT+TGG | - | chr3.1:78888735-78888754 | None:intergenic | 25.0% |
| !! | AATTAACAAAGTTAGGGTTT+TGG | - | chr3.1:78886731-78886750 | None:intergenic | 25.0% |
| !! | AATTCAAAGCTTGTTTGAAT+TGG | - | chr3.1:78890126-78890145 | None:intergenic | 25.0% |
| !! | AGAATATTGTTAAGTTTTGC+GGG | - | chr3.1:78889828-78889847 | None:intergenic | 25.0% |
| !! | ATTAACAAAGTTAGGGTTTT+GGG | - | chr3.1:78886730-78886749 | None:intergenic | 25.0% |
| !! | GAAAGTAGAGATGATTTTAA+TGG | - | chr3.1:78887954-78887973 | None:intergenic | 25.0% |
| !!! | AAAGTGTTGTTATTCTATCA+TGG | + | chr3.1:78888504-78888523 | MS.gene06236:intron | 25.0% |
| !!! | AAGTAATTTTTTAATTGGGC+CGG | + | chr3.1:78887464-78887483 | MS.gene06236:intron | 25.0% |
| !!! | AAGTAGAGATGATTTTAATG+GGG | - | chr3.1:78887952-78887971 | None:intergenic | 25.0% |
| !!! | ACTTGTTATTATCTTTGTCA+GGG | + | chr3.1:78889707-78889726 | MS.gene06236:intron | 25.0% |
| !!! | ATGTTAAGTTGTTTTTTCTC+TGG | + | chr3.1:78888260-78888279 | MS.gene06236:intron | 25.0% |
| !!! | ATTTAATTTGAAATCCTCCA+TGG | - | chr3.1:78888591-78888610 | None:intergenic | 25.0% |
| !!! | CAAACAAGCTTTGAATTAAA+TGG | + | chr3.1:78890129-78890148 | MS.gene06236:intron | 25.0% |
| !!! | GGTTAAACATTTTGATGAAT+TGG | + | chr3.1:78891812-78891831 | MS.gene06236:CDS | 25.0% |
| !!! | TACTTGTTATTATCTTTGTC+AGG | + | chr3.1:78889706-78889725 | MS.gene06236:intron | 25.0% |
| !!! | TGTTAAGTTGTTTTTTCTCT+GGG | + | chr3.1:78888261-78888280 | MS.gene06236:intron | 25.0% |
| !!! | TGTTTTGAATCTATGTTGTT+TGG | + | chr3.1:78887720-78887739 | MS.gene06236:intron | 25.0% |
| !!! | TTGTTGCTGATTTGTTAATT+AGG | + | chr3.1:78891770-78891789 | MS.gene06236:intron | 25.0% |
| AAAAATGAAGTTGAGCAGAA+TGG | + | chr3.1:78888920-78888939 | MS.gene06236:CDS | 30.0% | |
| AAATTTGCATTGCATGAAGA+AGG | - | chr3.1:78888427-78888446 | None:intergenic | 30.0% | |
| AACTTAACATAGTGTTTGGT+TGG | + | chr3.1:78887673-78887692 | MS.gene06236:intron | 30.0% | |
| AATTTGCATTGCATGAAGAA+GGG | - | chr3.1:78888426-78888445 | None:intergenic | 30.0% | |
| ACTTAACATAGTGTTTGGTT+GGG | + | chr3.1:78887674-78887693 | MS.gene06236:intron | 30.0% | |
| AGTTACAACAACGAAGAATA+TGG | - | chr3.1:78891131-78891150 | None:intergenic | 30.0% | |
| ATCTATCAAGAAGGATTTAG+TGG | + | chr3.1:78889130-78889149 | MS.gene06236:intron | 30.0% | |
| ATGAAAATCCTTCAAAAAGG+CGG | + | chr3.1:78888954-78888973 | MS.gene06236:CDS | 30.0% | |
| ATTGCAAGCAAAATAGTACT+GGG | - | chr3.1:78888311-78888330 | None:intergenic | 30.0% | |
| CAACATCAAATATATCCCTT+GGG | - | chr3.1:78889563-78889582 | None:intergenic | 30.0% | |
| CAGAGCAAGAAAATAAATAG+GGG | + | chr3.1:78891194-78891213 | MS.gene06236:intron | 30.0% | |
| GAATAAATTCATGACAAGGA+AGG | + | chr3.1:78890870-78890889 | MS.gene06236:intron | 30.0% | |
| GCAGAATAAGATAAGATTAG+AGG | - | chr3.1:78891496-78891515 | None:intergenic | 30.0% | |
| GCGATACTAAGGAAAATTAT+TGG | + | chr3.1:78890100-78890119 | MS.gene06236:intron | 30.0% | |
| GGATATATTTGATGTTGAAG+AGG | + | chr3.1:78889566-78889585 | MS.gene06236:CDS | 30.0% | |
| GGTTGAATAAGTGAAAAATG+AGG | + | chr3.1:78888171-78888190 | MS.gene06236:intron | 30.0% | |
| GTCATTTGATCTATATAACC+CGG | - | chr3.1:78887486-78887505 | None:intergenic | 30.0% | |
| GTTTCAAAAACGGGAATTAT+GGG | + | chr3.1:78888555-78888574 | MS.gene06236:CDS | 30.0% | |
| TAACGAACAATAACAGTGTT+TGG | - | chr3.1:78888043-78888062 | None:intergenic | 30.0% | |
| TAAGAATTTGGATCCAACTA+TGG | - | chr3.1:78890372-78890391 | None:intergenic | 30.0% | |
| TAATAATGATGCATGCTATC+CGG | + | chr3.1:78889910-78889929 | MS.gene06236:intron | 30.0% | |
| TACAGGCTATTAAACATTGT+GGG | - | chr3.1:78891173-78891192 | None:intergenic | 30.0% | |
| TAGAATTTGTGAAAGACTAG+TGG | + | chr3.1:78889223-78889242 | MS.gene06236:intron | 30.0% | |
| TCAACATCAAATATATCCCT+TGG | - | chr3.1:78889564-78889583 | None:intergenic | 30.0% | |
| TGCACGAAATGTTTCAAAAA+CGG | + | chr3.1:78888545-78888564 | MS.gene06236:CDS | 30.0% | |
| TGGTTTATGATAGGACATTA+TGG | + | chr3.1:78890166-78890185 | MS.gene06236:intron | 30.0% | |
| TGTGAACTTAACATAGTGTT+TGG | + | chr3.1:78887669-78887688 | MS.gene06236:intron | 30.0% | |
| TGTTTCAAAAACGGGAATTA+TGG | + | chr3.1:78888554-78888573 | MS.gene06236:CDS | 30.0% | |
| TTAAGTTCACATGATGTGAA+AGG | - | chr3.1:78887660-78887679 | None:intergenic | 30.0% | |
| TTAATTAGGGTGTGATTTCA+AGG | + | chr3.1:78888066-78888085 | MS.gene06236:intron | 30.0% | |
| TTACAGGCTATTAAACATTG+TGG | - | chr3.1:78891174-78891193 | None:intergenic | 30.0% | |
| TTTCAAAAACGGGAATTATG+GGG | + | chr3.1:78888556-78888575 | MS.gene06236:CDS | 30.0% | |
| ! | AAAAATCAACCTTGCTACTT+CGG | - | chr3.1:78887330-78887349 | None:intergenic | 30.0% |
| ! | AAAATAGTACTGGGTGAAAA+TGG | - | chr3.1:78888302-78888321 | None:intergenic | 30.0% |
| ! | AAATGAGTTGGATAAAGACA+TGG | + | chr3.1:78889154-78889173 | MS.gene06236:intron | 30.0% |
| ! | AATTTTCCACTTCATCCTTA+AGG | - | chr3.1:78890644-78890663 | None:intergenic | 30.0% |
| ! | AGTGTTTGGTTCAAATGAAA+GGG | - | chr3.1:78888029-78888048 | None:intergenic | 30.0% |
| ! | ATTATCAGTAACCTGTTTTG+AGG | + | chr3.1:78890595-78890614 | MS.gene06236:intron | 30.0% |
| ! | GACTCATGAACAAAAAGTTT+TGG | + | chr3.1:78889852-78889871 | MS.gene06236:intron | 30.0% |
| ! | TCTGTAGTTTTTGACATTGT+TGG | + | chr3.1:78891688-78891707 | MS.gene06236:intron | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | + | chr3.1:78889174-78889193 | MS.gene06236:intron | 30.0% |
| ! | TTATTTTCTTGCTCTGTTAC+AGG | - | chr3.1:78891190-78891209 | None:intergenic | 30.0% |
| !! | AGTAGAGATGATTTTAATGG+GGG | - | chr3.1:78887951-78887970 | None:intergenic | 30.0% |
| !! | AGTTCATGATGTTTTGAATC+AGG | + | chr3.1:78889449-78889468 | MS.gene06236:intron | 30.0% |
| !! | TTCTGCTCAACTTCATTTTT+AGG | - | chr3.1:78888920-78888939 | None:intergenic | 30.0% |
| !!! | AGTAATTTTTTAATTGGGCC+GGG | + | chr3.1:78887465-78887484 | MS.gene06236:intron | 30.0% |
| !!! | TAGAATCTGTTTTGAAGCAT+GGG | + | chr3.1:78888675-78888694 | MS.gene06236:CDS | 30.0% |
| !!! | TTAGAATCTGTTTTGAAGCA+TGG | + | chr3.1:78888674-78888693 | MS.gene06236:CDS | 30.0% |
| AAAACCTTGGAGACACAAAA+AGG | + | chr3.1:78890705-78890724 | MS.gene06236:intron | 35.0% | |
| AAACCTTGGAGACACAAAAA+GGG | + | chr3.1:78890706-78890725 | MS.gene06236:intron | 35.0% | |
| AAATATACAGATGGGTGTCT+AGG | - | chr3.1:78890847-78890866 | None:intergenic | 35.0% | |
| AAATCTCAGGAGAGAAAGTA+GGG | + | chr3.1:78889946-78889965 | MS.gene06236:intron | 35.0% | |
| AATCTTTGGTAAAGGGAAAC+AGG | - | chr3.1:78890817-78890836 | None:intergenic | 35.0% | |
| AATGAACCTTAAGGATGAAG+TGG | + | chr3.1:78890635-78890654 | MS.gene06236:intron | 35.0% | |
| ACCCAAATTCTCTACTAACA+TGG | - | chr3.1:78890516-78890535 | None:intergenic | 35.0% | |
| AGAAAAAAAGAGGAAAGCAG+AGG | - | chr3.1:78888396-78888415 | None:intergenic | 35.0% | |
| AGAATACAATCAACCAAGTG+CGG | - | chr3.1:78889349-78889368 | None:intergenic | 35.0% | |
| AGCAACTATAATTGATGCTC+AGG | + | chr3.1:78891642-78891661 | MS.gene06236:CDS | 35.0% | |
| AGGATGAAGTGGAAAATTAC+TGG | + | chr3.1:78890646-78890665 | MS.gene06236:intron | 35.0% | |
| AGTGCGGATATTAATACATG+AGG | - | chr3.1:78889333-78889352 | None:intergenic | 35.0% | |
| ATCGCATCTCTAGCATATAT+TGG | + | chr3.1:78889269-78889288 | MS.gene06236:intron | 35.0% | |
| ATTCATCGGTCACTAAAATG+AGG | + | chr3.1:78890418-78890437 | MS.gene06236:intron | 35.0% | |
| ATTTGCATTGCATGAAGAAG+GGG | - | chr3.1:78888425-78888444 | None:intergenic | 35.0% | |
| CATGTATTAATATCCGCACT+TGG | + | chr3.1:78889333-78889352 | MS.gene06236:intron | 35.0% | |
| GAAATAGGCTTCAACGAATT+TGG | - | chr3.1:78887145-78887164 | None:intergenic | 35.0% | |
| GAACAATGGAAACAAAGTTC+AGG | + | chr3.1:78888841-78888860 | MS.gene06236:CDS | 35.0% | |
| GAGGATAGTTCAAGTATTAG+AGG | + | chr3.1:78890073-78890092 | MS.gene06236:intron | 35.0% | |
| GATTGCAAGCAAAATAGTAC+TGG | - | chr3.1:78888312-78888331 | None:intergenic | 35.0% | |
| GCACGAAATGTTTCAAAAAC+GGG | + | chr3.1:78888546-78888565 | MS.gene06236:CDS | 35.0% | |
| GCATCGTATTCAGATGTTTA+CGG | + | chr3.1:78887238-78887257 | MS.gene06236:CDS | 35.0% | |
| GCCATGTTAGTAGAGAATTT+GGG | + | chr3.1:78890512-78890531 | MS.gene06236:intron | 35.0% | |
| GGAGAAGGTAATTGTTCATT+TGG | + | chr3.1:78887546-78887565 | MS.gene06236:intron | 35.0% | |
| GGATGAAGTGGAAAATTACT+GGG | + | chr3.1:78890647-78890666 | MS.gene06236:intron | 35.0% | |
| GGATTTAGTGGTAAATGAGT+TGG | + | chr3.1:78889142-78889161 | MS.gene06236:intron | 35.0% | |
| GGGGGATAAAAGAAAAAAAG+AGG | - | chr3.1:78888406-78888425 | None:intergenic | 35.0% | |
| GTGAATGTTAACCTTCTAGA+AGG | - | chr3.1:78886926-78886945 | None:intergenic | 35.0% | |
| GTTATTGGCATTGTGAACAA+TGG | + | chr3.1:78888827-78888846 | MS.gene06236:CDS | 35.0% | |
| GTTCAATCTCTCTATCTTCT+TGG | - | chr3.1:78891615-78891634 | None:intergenic | 35.0% | |
| TATTCAACCTACACCATGTT+TGG | - | chr3.1:78888160-78888179 | None:intergenic | 35.0% | |
| TATTTACATGTTCCTTTCCC+TGG | - | chr3.1:78889295-78889314 | None:intergenic | 35.0% | |
| TCGTCTAGGAAACAATCTTA+TGG | + | chr3.1:78890457-78890476 | MS.gene06236:intron | 35.0% | |
| TGACATTGTTGGAATTTCTC+TGG | + | chr3.1:78891699-78891718 | MS.gene06236:intron | 35.0% | |
| TGCCATGTTAGTAGAGAATT+TGG | + | chr3.1:78890511-78890530 | MS.gene06236:intron | 35.0% | |
| TGGTTCAGGTATACATCTTA+GGG | + | chr3.1:78891719-78891738 | MS.gene06236:intron | 35.0% | |
| TGGTTTCGGATAGAACATTA+TGG | - | chr3.1:78890352-78890371 | None:intergenic | 35.0% | |
| TTGCGGAAGACATTTAAATC+TGG | + | chr3.1:78891909-78891928 | MS.gene06236:CDS | 35.0% | |
| TTTGGATCCAACTATGGTTT+CGG | - | chr3.1:78890366-78890385 | None:intergenic | 35.0% | |
| TTTGGTAGGGTTTATGGTAA+TGG | + | chr3.1:78887590-78887609 | MS.gene06236:intron | 35.0% | |
| ! | CAGTGTTTGGTTCAAATGAA+AGG | - | chr3.1:78888030-78888049 | None:intergenic | 35.0% |
| ! | CATTGAAGTTTCTTGGTGAT+CGG | - | chr3.1:78888876-78888895 | None:intergenic | 35.0% |
| ! | GAACAAGGTTTTCCTTTTCT+TGG | + | chr3.1:78886985-78887004 | MS.gene06236:CDS | 35.0% |
| ! | GAGAATCTTCGTAGAAGTAT+TGG | + | chr3.1:78890029-78890048 | MS.gene06236:intron | 35.0% |
| ! | TGATGAATTGGAGCTTTTGA+TGG | + | chr3.1:78891824-78891843 | MS.gene06236:CDS | 35.0% |
| ! | TGATTTGATTCGACGTAAAG+AGG | + | chr3.1:78887261-78887280 | MS.gene06236:CDS | 35.0% |
| ! | TGTTGTTATTCTATCATGGC+AGG | + | chr3.1:78888508-78888527 | MS.gene06236:intron | 35.0% |
| ! | TGTTTGGGATCATAACACAT+TGG | + | chr3.1:78891438-78891457 | MS.gene06236:intron | 35.0% |
| ! | TTAGCATTTTGTATGCCCAA+AGG | - | chr3.1:78891039-78891058 | None:intergenic | 35.0% |
| ! | TTTAGGTTTGGTAGGGTTTA+TGG | + | chr3.1:78887584-78887603 | MS.gene06236:intron | 35.0% |
| !! | CATGATGTTTTGAATCAGGT+GGG | + | chr3.1:78889453-78889472 | MS.gene06236:intron | 35.0% |
| !! | CGAGTTCTGAATCTGAAATT+GGG | - | chr3.1:78886663-78886682 | None:intergenic | 35.0% |
| !! | TAGAAGTATTGGTAAGTGGA+TGG | + | chr3.1:78890040-78890059 | MS.gene06236:intron | 35.0% |
| !! | TCATGATGTTTTGAATCAGG+TGG | + | chr3.1:78889452-78889471 | MS.gene06236:intron | 35.0% |
| !! | TCGAGTTCTGAATCTGAAAT+TGG | - | chr3.1:78886664-78886683 | None:intergenic | 35.0% |
| !! | TTCGTAGAAGTATTGGTAAG+TGG | + | chr3.1:78890036-78890055 | MS.gene06236:intron | 35.0% |
| !! | TTGCATTCTCCTTTTTCATG+TGG | + | chr3.1:78889081-78889100 | MS.gene06236:intron | 35.0% |
| !! | TTTGGGTTAGTACCTTATAG+CGG | + | chr3.1:78890529-78890548 | MS.gene06236:intron | 35.0% |
| !!! | AGAATCTGTTTTGAAGCATG+GGG | + | chr3.1:78888676-78888695 | MS.gene06236:CDS | 35.0% |
| !!! | AGTAACCTGTTTTGAGGTAA+GGG | + | chr3.1:78890601-78890620 | MS.gene06236:intron | 35.0% |
| AAAATCCTTCAAAAAGGCGG+CGG | + | chr3.1:78888957-78888976 | MS.gene06236:CDS | 40.0% | |
| AAACATTGTGGGAGACAAGA+TGG | - | chr3.1:78891162-78891181 | None:intergenic | 40.0% | |
| AACATTGTGGGAGACAAGAT+GGG | - | chr3.1:78891161-78891180 | None:intergenic | 40.0% | |
| AACCTACACCATGTTTGGTT+GGG | - | chr3.1:78888155-78888174 | None:intergenic | 40.0% | |
| AAGAGGATAATGCTTCAGCA+AGG | + | chr3.1:78889583-78889602 | MS.gene06236:CDS | 40.0% | |
| AATGCAACCAAAGAAGCTGT+TGG | + | chr3.1:78890561-78890580 | MS.gene06236:intron | 40.0% | |
| ACATCTGAATACGATGCCAA+CGG | - | chr3.1:78887235-78887254 | None:intergenic | 40.0% | |
| ACCTATACCAAAACCACATG+AGG | - | chr3.1:78890008-78890027 | None:intergenic | 40.0% | |
| ACTCATGATCACACTAAGCA+AGG | - | chr3.1:78889432-78889451 | None:intergenic | 40.0% | |
| AGATTTCACTCACACAAGAC+CGG | - | chr3.1:78889932-78889951 | None:intergenic | 40.0% | |
| AGTGGAAAATTACTGGGAAG+TGG | + | chr3.1:78890653-78890672 | MS.gene06236:intron | 40.0% | |
| ATCTCTAGCATATATTGGCC+AGG | + | chr3.1:78889274-78889293 | MS.gene06236:intron | 40.0% | |
| ATTTGGCTGCTATCCCATAT+TGG | + | chr3.1:78887802-78887821 | MS.gene06236:intron | 40.0% | |
| CAGTATGTGTAGAGTGGTAT+AGG | - | chr3.1:78891105-78891124 | None:intergenic | 40.0% | |
| CATCCTTAAGGTTCATTTGC+AGG | - | chr3.1:78890632-78890651 | None:intergenic | 40.0% | |
| CCAAGAAACTTCAATGACAC+AGG | + | chr3.1:78888880-78888899 | MS.gene06236:CDS | 40.0% | |
| CGTTGGGGTTTGATTAACTA+CGG | + | chr3.1:78887010-78887029 | MS.gene06236:CDS | 40.0% | |
| CTATACCACTCTACACATAC+TGG | + | chr3.1:78891103-78891122 | MS.gene06236:intron | 40.0% | |
| CTCTACTTTCGAACCAAACA+GGG | + | chr3.1:78887964-78887983 | MS.gene06236:intron | 40.0% | |
| CTGGTTCAGGTATACATCTT+AGG | + | chr3.1:78891718-78891737 | MS.gene06236:intron | 40.0% | |
| GAAATCTCAGGAGAGAAAGT+AGG | + | chr3.1:78889945-78889964 | MS.gene06236:intron | 40.0% | |
| GACGTAAAGAGGTCAATTGT+GGG | + | chr3.1:78887272-78887291 | MS.gene06236:CDS | 40.0% | |
| GCATGAGAAAAAACGCTAGT+TGG | - | chr3.1:78888374-78888393 | None:intergenic | 40.0% | |
| GCTCTTATACGTAGTGTCAA+TGG | - | chr3.1:78891538-78891557 | None:intergenic | 40.0% | |
| GGGAATTGTGGTGATAAATG+TGG | + | chr3.1:78887292-78887311 | MS.gene06236:CDS | 40.0% | |
| GTCGAAATACTCCTTGAATG+CGG | - | chr3.1:78886828-78886847 | None:intergenic | 40.0% | |
| GTTCCTGCAAATGAACCTTA+AGG | + | chr3.1:78890626-78890645 | MS.gene06236:intron | 40.0% | |
| GTTCTATCCGAAACCATAGT+TGG | + | chr3.1:78890356-78890375 | MS.gene06236:intron | 40.0% | |
| GTTTGGTTGGGAAAAATCGA+GGG | + | chr3.1:78887686-78887705 | MS.gene06236:intron | 40.0% | |
| TAAGTAAGTGGACATCGTCT+AGG | + | chr3.1:78890443-78890462 | MS.gene06236:intron | 40.0% | |
| TAGAAGGTTAACATTCACCG+AGG | + | chr3.1:78886928-78886947 | MS.gene06236:CDS | 40.0% | |
| TATAAGAGCTGCCATTGGAA+CGG | + | chr3.1:78891549-78891568 | MS.gene06236:CDS | 40.0% | |
| TCTCTACTTTCGAACCAAAC+AGG | + | chr3.1:78887963-78887982 | MS.gene06236:intron | 40.0% | |
| TCTCTAGCATATATTGGCCA+GGG | + | chr3.1:78889275-78889294 | MS.gene06236:intron | 40.0% | |
| TCTTGTGTGAGTGAAATCTC+AGG | + | chr3.1:78889933-78889952 | MS.gene06236:intron | 40.0% | |
| TGTGGTGATAAATGTGGTTC+TGG | + | chr3.1:78887298-78887317 | MS.gene06236:CDS | 40.0% | |
| TGTTCATTTGGACTTAGCTC+TGG | + | chr3.1:78887558-78887577 | MS.gene06236:intron | 40.0% | |
| TGTTTGGTTGGGAAAAATCG+AGG | + | chr3.1:78887685-78887704 | MS.gene06236:intron | 40.0% | |
| TTAGAGGTGAAGCGATACTA+AGG | + | chr3.1:78890089-78890108 | MS.gene06236:intron | 40.0% | |
| TTTGCATTGCATGAAGAAGG+GGG | - | chr3.1:78888424-78888443 | None:intergenic | 40.0% | |
| TTTGGCTGCTATCCCATATT+GGG | + | chr3.1:78887803-78887822 | MS.gene06236:intron | 40.0% | |
| TTTGGTAAAGGGAAACAGGA+AGG | - | chr3.1:78890813-78890832 | None:intergenic | 40.0% | |
| ! | ATTGGAGCTTTTGATGGAGA+AGG | + | chr3.1:78891830-78891849 | MS.gene06236:CDS | 40.0% |
| ! | ATTTTGTATGCCCAAAGGTG+TGG | - | chr3.1:78891034-78891053 | None:intergenic | 40.0% |
| ! | CCTGTGTCATTGAAGTTTCT+TGG | - | chr3.1:78888883-78888902 | None:intergenic | 40.0% |
| ! | CTGGTGATTTAGGTTTGGTA+GGG | + | chr3.1:78887577-78887596 | MS.gene06236:intron | 40.0% |
| ! | TCTGGTGATTTAGGTTTGGT+AGG | + | chr3.1:78887576-78887595 | MS.gene06236:intron | 40.0% |
| ! | TGACGTCACTTTCTTGAACA+AGG | + | chr3.1:78886970-78886989 | MS.gene06236:CDS | 40.0% |
| ! | TGTAAGTTGAAGGTTGAGGA+AGG | + | chr3.1:78887088-78887107 | MS.gene06236:CDS | 40.0% |
| ! | TGTTGGAATTTCTCTGGTTC+AGG | + | chr3.1:78891705-78891724 | MS.gene06236:intron | 40.0% |
| ! | TTTTCCTTTTCTTGGAGCGT+TGG | + | chr3.1:78886993-78887012 | MS.gene06236:CDS | 40.0% |
| !! | ATGGTAATGGAATGAGGTTC+TGG | + | chr3.1:78887603-78887622 | MS.gene06236:intron | 40.0% |
| !! | GCATTCAAGGAGTATTTCGA+CGG | + | chr3.1:78886827-78886846 | MS.gene06236:CDS | 40.0% |
| !! | GGATGGTGGAGAATGAAAAT+AGG | + | chr3.1:78890730-78890749 | MS.gene06236:intron | 40.0% |
| !! | GGGTTTATGGTAATGGAATG+AGG | + | chr3.1:78887597-78887616 | MS.gene06236:intron | 40.0% |
| !! | TAGCTCTGGTGATTTAGGTT+TGG | + | chr3.1:78887572-78887591 | MS.gene06236:intron | 40.0% |
| !! | TGGTAATGGAATGAGGTTCT+GGG | + | chr3.1:78887604-78887623 | MS.gene06236:intron | 40.0% |
| !! | TTAAATCTGGTGTCGCTAGA+TGG | + | chr3.1:78891922-78891941 | MS.gene06236:CDS | 40.0% |
| !! | TTGAGAATAAGGGGTGTTTG+CGG | + | chr3.1:78889387-78889406 | MS.gene06236:intron | 40.0% |
| !! | TTTCCTTTTCTTGGAGCGTT+GGG | + | chr3.1:78886994-78887013 | MS.gene06236:CDS | 40.0% |
| !!! | CAGTAACCTGTTTTGAGGTA+AGG | + | chr3.1:78890600-78890619 | MS.gene06236:intron | 40.0% |
| !!! | GTAACCTGTTTTGAGGTAAG+GGG | + | chr3.1:78890602-78890621 | MS.gene06236:intron | 40.0% |
| !!! | TAACCTGTTTTGAGGTAAGG+GGG | + | chr3.1:78890603-78890622 | MS.gene06236:intron | 40.0% |
| !!! | TCATGTGGTTTTGGTATAGG+TGG | + | chr3.1:78890007-78890026 | MS.gene06236:intron | 40.0% |
| AAACTCATTGAGCTGCCCTT+TGG | + | chr3.1:78888758-78888777 | MS.gene06236:CDS | 45.0% | |
| AAATCCTTCAAAAAGGCGGC+GGG | + | chr3.1:78888958-78888977 | MS.gene06236:CDS | 45.0% | |
| AACAGAGAAAGCCGCATTCA+AGG | + | chr3.1:78886814-78886833 | MS.gene06236:CDS | 45.0% | |
| AACTCATTGAGCTGCCCTTT+GGG | + | chr3.1:78888759-78888778 | MS.gene06236:CDS | 45.0% | |
| AAGAAGCTGTTGGATGTGCA+TGG | + | chr3.1:78890571-78890590 | MS.gene06236:intron | 45.0% | |
| ACATTGTGGGAGACAAGATG+GGG | - | chr3.1:78891160-78891179 | None:intergenic | 45.0% | |
| ACCATGTTTGGTTGGGAAGA+TGG | - | chr3.1:78888148-78888167 | None:intergenic | 45.0% | |
| ACGGGAATTATGGGGAGAAA+AGG | + | chr3.1:78888564-78888583 | MS.gene06236:CDS | 45.0% | |
| AGAAGGAACATGAAGAGGAG+CGG | + | chr3.1:78887065-78887084 | MS.gene06236:CDS | 45.0% | |
| AGCATATATTGGCCAGGGAA+AGG | + | chr3.1:78889280-78889299 | MS.gene06236:intron | 45.0% | |
| AGTGCTTACTGGAAGAGCTT+GGG | - | chr3.1:78886699-78886718 | None:intergenic | 45.0% | |
| ATAACGTCCCCTACTTCACT+TGG | + | chr3.1:78890199-78890218 | MS.gene06236:intron | 45.0% | |
| ATACCAAAACCACATGAGGC+AGG | - | chr3.1:78890004-78890023 | None:intergenic | 45.0% | |
| ATCCCAAATCACCCCCAATA+TGG | - | chr3.1:78887819-78887838 | None:intergenic | 45.0% | |
| ATCCCATATTGGGGGTGATT+TGG | + | chr3.1:78887813-78887832 | MS.gene06236:intron | 45.0% | |
| ATCGCGAAGAACCTTCTAGA+AGG | + | chr3.1:78886912-78886931 | MS.gene06236:CDS | 45.0% | |
| CAACCTACACCATGTTTGGT+TGG | - | chr3.1:78888156-78888175 | None:intergenic | 45.0% | |
| CAGCAGTTCACTAATGAAGC+AGG | + | chr3.1:78889000-78889019 | MS.gene06236:CDS | 45.0% | |
| CATGATCACACTAAGCAAGG+TGG | - | chr3.1:78889429-78889448 | None:intergenic | 45.0% | |
| CGACGTAAAGAGGTCAATTG+TGG | + | chr3.1:78887271-78887290 | MS.gene06236:CDS | 45.0% | |
| CTACGTATAAGAGCTGCCAT+TGG | + | chr3.1:78891544-78891563 | MS.gene06236:CDS | 45.0% | |
| CTGCTTCATTAGTGAACTGC+TGG | - | chr3.1:78889002-78889021 | None:intergenic | 45.0% | |
| GAGGTACGAAAATCACTCGT+CGG | + | chr3.1:78886947-78886966 | MS.gene06236:CDS | 45.0% | |
| GAGGTCAATTGTGGGAATTG+TGG | + | chr3.1:78887280-78887299 | MS.gene06236:CDS | 45.0% | |
| GATACGAAGATTGCTGATGG+TGG | + | chr3.1:78887175-78887194 | MS.gene06236:CDS | 45.0% | |
| GCAACAACACGAATCCCATT+AGG | - | chr3.1:78887118-78887137 | None:intergenic | 45.0% | |
| GGTTGAGAAGTTGCAACAGA+AGG | + | chr3.1:78891791-78891810 | MS.gene06236:intron | 45.0% | |
| TATAGGGAATGGGAGTGAAG+TGG | + | chr3.1:78887753-78887772 | MS.gene06236:intron | 45.0% | |
| TCCATCTTCCCAACCAAACA+TGG | + | chr3.1:78888144-78888163 | MS.gene06236:intron | 45.0% | |
| TCCCAAATCACCCCCAATAT+GGG | - | chr3.1:78887818-78887837 | None:intergenic | 45.0% | |
| TCCCATATTGGGGGTGATTT+GGG | + | chr3.1:78887814-78887833 | MS.gene06236:intron | 45.0% | |
| TGATGAGAATTCGCTCCCAA+GGG | + | chr3.1:78889545-78889564 | MS.gene06236:CDS | 45.0% | |
| TGCACATCCAACAGCTTCTT+TGG | - | chr3.1:78890571-78890590 | None:intergenic | 45.0% | |
| TGGACATTACCGAAGTAGCA+AGG | + | chr3.1:78887318-78887337 | MS.gene06236:CDS | 45.0% | |
| TGGATCCAGTATGTGTAGAG+TGG | - | chr3.1:78891111-78891130 | None:intergenic | 45.0% | |
| TGGGTTCAACTTGTGGTGAT+GGG | + | chr3.1:78887623-78887642 | MS.gene06236:intron | 45.0% | |
| TTATGGGGAGAAAAGGTCCA+TGG | + | chr3.1:78888571-78888590 | MS.gene06236:CDS | 45.0% | |
| TTCCCAACCAAACATGGTGT+AGG | + | chr3.1:78888150-78888169 | MS.gene06236:intron | 45.0% | |
| TTGGCTGCTATCCCATATTG+GGG | + | chr3.1:78887804-78887823 | MS.gene06236:intron | 45.0% | |
| TTTCCCCACCAAGTGAAGTA+GGG | - | chr3.1:78890210-78890229 | None:intergenic | 45.0% | |
| TTTCGAACCAAACAGGGAGA+GGG | + | chr3.1:78887970-78887989 | MS.gene06236:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr3.1:78890303-78890322 | MS.gene06236:intron | 45.0% |
| ! | AATGAAAGGGTGCAAGGAGA+AGG | - | chr3.1:78888016-78888035 | None:intergenic | 45.0% |
| ! | ATGAAAGGGTGCAAGGAGAA+GGG | - | chr3.1:78888015-78888034 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr3.1:78890302-78890321 | MS.gene06236:intron | 45.0% |
| ! | GACGAGTGATTTTCGTACCT+CGG | - | chr3.1:78886948-78886967 | None:intergenic | 45.0% |
| ! | GGTTCAAATGAAAGGGTGCA+AGG | - | chr3.1:78888022-78888041 | None:intergenic | 45.0% |
| ! | TGAAGGTTTAGAGATGGTGG+AGG | + | chr3.1:78889740-78889759 | MS.gene06236:CDS | 45.0% |
| ! | TGGTGTTAAAATTGCGCCGT+TGG | + | chr3.1:78887216-78887235 | MS.gene06236:CDS | 45.0% |
| ! | TTTGAAGCATGGGGATGACT+GGG | + | chr3.1:78888685-78888704 | MS.gene06236:CDS | 45.0% |
| !! | AAGGTTTAGAGATGGTGGAG+GGG | + | chr3.1:78889742-78889761 | MS.gene06236:CDS | 45.0% |
| !! | CTGAACGGATTGATGTGTTG+CGG | + | chr3.1:78891892-78891911 | MS.gene06236:CDS | 45.0% |
| !! | GAAGGTTTAGAGATGGTGGA+GGG | + | chr3.1:78889741-78889760 | MS.gene06236:CDS | 45.0% |
| !! | GGACTTAGCTCTGGTGATTT+AGG | + | chr3.1:78887567-78887586 | MS.gene06236:intron | 45.0% |
| !! | TTGAGGAAGGTGCTCCTAAT+GGG | + | chr3.1:78887101-78887120 | MS.gene06236:CDS | 45.0% |
| !!! | AACCTGTTTTGAGGTAAGGG+GGG | + | chr3.1:78890604-78890623 | MS.gene06236:intron | 45.0% |
| !!! | GCCTCATGTGGTTTTGGTAT+AGG | + | chr3.1:78890004-78890023 | MS.gene06236:intron | 45.0% |
| !!! | TTCCTTTTCTTGGAGCGTTG+GGG | + | chr3.1:78886995-78887014 | MS.gene06236:CDS | 45.0% |
| !!! | TTTTGAAGCATGGGGATGAC+TGG | + | chr3.1:78888684-78888703 | MS.gene06236:CDS | 45.0% |
| !! | AAAAATAAATGATAATAAAT+TGG | - | chr3.1:78891750-78891769 | None:intergenic | 5.0% |
| !!! | AAAATTTTAAAAAAAATTGT+TGG | - | chr3.1:78888120-78888139 | None:intergenic | 5.0% |
| AACCCCAACGCTCCAAGAAA+AGG | - | chr3.1:78887000-78887019 | None:intergenic | 50.0% | |
| AACCCCCCTTACCTCAAAAC+AGG | - | chr3.1:78890609-78890628 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCAGCTACA+TGG | + | chr3.1:78890315-78890334 | MS.gene06236:intron | 50.0% | |
| ACTCATTGAGCTGCCCTTTG+GGG | + | chr3.1:78888760-78888779 | MS.gene06236:CDS | 50.0% | |
| ACTGGGAAGTGGCAATAGAG+AGG | + | chr3.1:78890664-78890683 | MS.gene06236:intron | 50.0% | |
| AGAGTGGTATAGGTCAGCGT+CGG | - | chr3.1:78891095-78891114 | None:intergenic | 50.0% | |
| AGCAATCTTGCTCCTAGCCA+AGG | + | chr3.1:78891007-78891026 | MS.gene06236:intron | 50.0% | |
| AGCGGAGAAGGAACATGAAG+AGG | + | chr3.1:78887060-78887079 | MS.gene06236:CDS | 50.0% | |
| AGTGGATGGCAGACTAGATG+AGG | + | chr3.1:78890054-78890073 | MS.gene06236:intron | 50.0% | |
| ATGTAGCTGACCCCACTTAG+TGG | - | chr3.1:78890316-78890335 | None:intergenic | 50.0% | |
| CATTGTGGGAGACAAGATGG+GGG | - | chr3.1:78891159-78891178 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr3.1:78890304-78890323 | None:intergenic | 50.0% | |
| CCTAACATGAGCTCCCCAAA+GGG | - | chr3.1:78888776-78888795 | None:intergenic | 50.0% | |
| CCTTGGAGACACAAAAAGGG+TGG | + | chr3.1:78890709-78890728 | MS.gene06236:intron | 50.0% | |
| CGAGGCTGAAGGTTTAGAGA+TGG | + | chr3.1:78889734-78889753 | MS.gene06236:CDS | 50.0% | |
| CGGGATACGAAGATTGCTGA+TGG | + | chr3.1:78887172-78887191 | MS.gene06236:CDS | 50.0% | |
| CTGCAGCAGCTGTGATATGA+GGG | - | chr3.1:78889500-78889519 | None:intergenic | 50.0% | |
| CTGGGAAGTGGCAATAGAGA+GGG | + | chr3.1:78890665-78890684 | MS.gene06236:intron | 50.0% | |
| CTGGGTTCAACTTGTGGTGA+TGG | + | chr3.1:78887622-78887641 | MS.gene06236:intron | 50.0% | |
| CTTACTGGAAGAGCTTGGGA+TGG | - | chr3.1:78886695-78886714 | None:intergenic | 50.0% | |
| CTTTCCCCACCAAGTGAAGT+AGG | - | chr3.1:78890211-78890230 | None:intergenic | 50.0% | |
| CTTTCGAACCAAACAGGGAG+AGG | + | chr3.1:78887969-78887988 | MS.gene06236:intron | 50.0% | |
| GAAGGAACACGCTGAAATGG+AGG | + | chr3.1:78891848-78891867 | MS.gene06236:CDS | 50.0% | |
| GACACAAAAAGGGTGGATGG+TGG | + | chr3.1:78890716-78890735 | MS.gene06236:intron | 50.0% | |
| GAGTGCTTACTGGAAGAGCT+TGG | - | chr3.1:78886700-78886719 | None:intergenic | 50.0% | |
| GGAGAAGGAACACGCTGAAA+TGG | + | chr3.1:78891845-78891864 | MS.gene06236:CDS | 50.0% | |
| GGAGACACAAAAAGGGTGGA+TGG | + | chr3.1:78890713-78890732 | MS.gene06236:intron | 50.0% | |
| GGCTGAAGGTTTAGAGATGG+TGG | + | chr3.1:78889737-78889756 | MS.gene06236:CDS | 50.0% | |
| GTGATAACCCTCTCCCTGTT+TGG | - | chr3.1:78887980-78887999 | None:intergenic | 50.0% | |
| GTGATGAGAATTCGCTCCCA+AGG | + | chr3.1:78889544-78889563 | MS.gene06236:CDS | 50.0% | |
| TAGCCAAGGTCCACACCTTT+GGG | + | chr3.1:78891021-78891040 | MS.gene06236:intron | 50.0% | |
| TAGTAGAGTCCTGCCTCATG+TGG | + | chr3.1:78889992-78890011 | MS.gene06236:intron | 50.0% | |
| TATCTTTGTCAGGGCTCTCG+AGG | + | chr3.1:78889716-78889735 | MS.gene06236:intron | 50.0% | |
| TCAGCAATCTTCGTATCCCG+CGG | - | chr3.1:78887172-78887191 | None:intergenic | 50.0% | |
| TGAAGCCTATTTCGTTGCCG+CGG | + | chr3.1:78887152-78887171 | MS.gene06236:CDS | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | - | chr3.1:78890309-78890328 | None:intergenic | 50.0% | |
| TGCACGAGCAAAGTTGTTGG+CGG | + | chr3.1:78891588-78891607 | MS.gene06236:CDS | 50.0% | |
| TGCTGCACGAGCAAAGTTGT+TGG | + | chr3.1:78891585-78891604 | MS.gene06236:CDS | 50.0% | |
| TGGCTGCTATCCCATATTGG+GGG | + | chr3.1:78887805-78887824 | MS.gene06236:intron | 50.0% | |
| TGGGAAAAATCGAGGGAGGA+GGG | + | chr3.1:78887693-78887712 | MS.gene06236:intron | 50.0% | |
| TGGGAAGTGGCAATAGAGAG+GGG | + | chr3.1:78890666-78890685 | MS.gene06236:intron | 50.0% | |
| TGGTTGGGAAAAATCGAGGG+AGG | + | chr3.1:78887689-78887708 | MS.gene06236:intron | 50.0% | |
| TGTAGCTGACCCCACTTAGT+GGG | - | chr3.1:78890315-78890334 | None:intergenic | 50.0% | |
| TTCCCCACCAAGTGAAGTAG+GGG | - | chr3.1:78890209-78890228 | None:intergenic | 50.0% | |
| TTGGGAAAAATCGAGGGAGG+AGG | + | chr3.1:78887692-78887711 | MS.gene06236:intron | 50.0% | |
| ! | AGAGGAGCGGTGTAAGTTGA+AGG | + | chr3.1:78887078-78887097 | MS.gene06236:CDS | 50.0% |
| ! | AGTCCTGCCTCATGTGGTTT+TGG | + | chr3.1:78889998-78890017 | MS.gene06236:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr3.1:78890301-78890320 | MS.gene06236:intron | 50.0% |
| ! | CCACCCTTTTTGTGTCTCCA+AGG | - | chr3.1:78890712-78890731 | None:intergenic | 50.0% |
| ! | CTACTTCACTTGGTGGGGAA+AGG | + | chr3.1:78890209-78890228 | MS.gene06236:intron | 50.0% |
| ! | GCGGTGTAAGTTGAAGGTTG+AGG | + | chr3.1:78887084-78887103 | MS.gene06236:CDS | 50.0% |
| ! | TATAGGTCAGCGTCGGACTT+GGG | - | chr3.1:78891088-78891107 | None:intergenic | 50.0% |
| ! | TTTTGCAGAGTGGTTCGCGT+GGG | + | chr3.1:78886778-78886797 | MS.gene06236:intron | 50.0% |
| ! | TTTTTGCAGAGTGGTTCGCG+TGG | + | chr3.1:78886777-78886796 | MS.gene06236:intron | 50.0% |
| !! | AAGGGGTGTTTGCGGAAGAT+CGG | + | chr3.1:78889395-78889414 | MS.gene06236:intron | 50.0% |
| !! | ATTGCTGATGGTGGTAGTGC+TGG | + | chr3.1:78887184-78887203 | MS.gene06236:CDS | 50.0% |
| !! | GAGGTTCTGGGTTCAACTTG+TGG | + | chr3.1:78887616-78887635 | MS.gene06236:intron | 50.0% |
| !! | GGGACAGAAAGAGTGCTTAC+TGG | - | chr3.1:78886710-78886729 | None:intergenic | 50.0% |
| !! | GTTGAGGAAGGTGCTCCTAA+TGG | + | chr3.1:78887100-78887119 | MS.gene06236:CDS | 50.0% |
| !! | TTGCTGATGGTGGTAGTGCT+GGG | + | chr3.1:78887185-78887204 | MS.gene06236:CDS | 50.0% |
| !!! | ACGGTGTCGTTTTTGCAGAG+TGG | + | chr3.1:78886768-78886787 | MS.gene06236:intron | 50.0% |
| AAGGAGAAGGGAGGAGAGGA+GGG | - | chr3.1:78888003-78888022 | None:intergenic | 55.0% | |
| ACGTCCCCTACTTCACTTGG+TGG | + | chr3.1:78890202-78890221 | MS.gene06236:intron | 55.0% | |
| AGGGAATGGGAGTGAAGTGG+AGG | + | chr3.1:78887756-78887775 | MS.gene06236:intron | 55.0% | |
| AGTCCAGACAGCACTGTGGT+TGG | - | chr3.1:78888633-78888652 | None:intergenic | 55.0% | |
| CACAGTGCTGTCTGGACTGA+GGG | + | chr3.1:78888635-78888654 | MS.gene06236:CDS | 55.0% | |
| CGTCCCCTACTTCACTTGGT+GGG | + | chr3.1:78890203-78890222 | MS.gene06236:intron | 55.0% | |
| CTAGCCAAGGTCCACACCTT+TGG | + | chr3.1:78891020-78891039 | MS.gene06236:intron | 55.0% | |
| CTGCCATTGGAACGGCTCTT+GGG | + | chr3.1:78891557-78891576 | MS.gene06236:CDS | 55.0% | |
| GAAGCCTATTTCGTTGCCGC+GGG | + | chr3.1:78887153-78887172 | MS.gene06236:CDS | 55.0% | |
| GCCTAACATGAGCTCCCCAA+AGG | - | chr3.1:78888777-78888796 | None:intergenic | 55.0% | |
| GCTGCAGCAGCTGTGATATG+AGG | - | chr3.1:78889501-78889520 | None:intergenic | 55.0% | |
| GGAAAAATCGAGGGAGGAGG+GGG | + | chr3.1:78887695-78887714 | MS.gene06236:intron | 55.0% | |
| GGGAAAAATCGAGGGAGGAG+GGG | + | chr3.1:78887694-78887713 | MS.gene06236:intron | 55.0% | |
| GTATCCCGCGGCAACGAAAT+AGG | - | chr3.1:78887160-78887179 | None:intergenic | 55.0% | |
| TGCCATTGGAACGGCTCTTG+GGG | + | chr3.1:78891558-78891577 | MS.gene06236:CDS | 55.0% | |
| TGGGGAGAAAAGGTCCATGG+AGG | + | chr3.1:78888574-78888593 | MS.gene06236:CDS | 55.0% | |
| ! | AAAGGGTGCAAGGAGAAGGG+AGG | - | chr3.1:78888012-78888031 | None:intergenic | 55.0% |
| ! | ATGCCCAAAGGTGTGGACCT+TGG | - | chr3.1:78891027-78891046 | None:intergenic | 55.0% |
| ! | CAAAGGTGTGGACCTTGGCT+AGG | - | chr3.1:78891022-78891041 | None:intergenic | 55.0% |
| ! | CCCTTTGGGGAGCTCATGTT+AGG | + | chr3.1:78888773-78888792 | MS.gene06236:CDS | 55.0% |
| ! | GTATAGGTCAGCGTCGGACT+TGG | - | chr3.1:78891089-78891108 | None:intergenic | 55.0% |
| ! | GTCCCCTACTTCACTTGGTG+GGG | + | chr3.1:78890204-78890223 | MS.gene06236:intron | 55.0% |
| AACTACGGTGCGCCTTCTGC+TGG | + | chr3.1:78887025-78887044 | MS.gene06236:CDS | 60.0% | |
| AGCCCCAAGAGCCGTTCCAA+TGG | - | chr3.1:78891563-78891582 | None:intergenic | 60.0% | |
| AGGAGAAGGGAGGAGAGGAG+GGG | - | chr3.1:78888002-78888021 | None:intergenic | 60.0% | |
| CAAGGAGAAGGGAGGAGAGG+AGG | - | chr3.1:78888004-78888023 | None:intergenic | 60.0% | |
| CCACAGTGCTGTCTGGACTG+AGG | + | chr3.1:78888634-78888653 | MS.gene06236:CDS | 60.0% | |
| CCTCAGTCCAGACAGCACTG+TGG | - | chr3.1:78888637-78888656 | None:intergenic | 60.0% | |
| GCTGCCATTGGAACGGCTCT+TGG | + | chr3.1:78891556-78891575 | MS.gene06236:CDS | 60.0% | |
| GGTGGGACTGCTCTCAACTG+TGG | + | chr3.1:78889470-78889489 | MS.gene06236:intron | 60.0% | |
| GTGCAAGGAGAAGGGAGGAG+AGG | - | chr3.1:78888007-78888026 | None:intergenic | 60.0% | |
| GTGCCAACCACAGTGCTGTC+TGG | + | chr3.1:78888627-78888646 | MS.gene06236:CDS | 60.0% | |
| GTGGAGGGGTCCACTCAATC+AGG | + | chr3.1:78889756-78889775 | MS.gene06236:CDS | 60.0% | |
| ! | ATGGTGGTAGTGCTGGGAGC+GGG | + | chr3.1:78887191-78887210 | MS.gene06236:CDS | 60.0% |
| ! | GATGGTGGTAGTGCTGGGAG+CGG | + | chr3.1:78887190-78887209 | MS.gene06236:CDS | 60.0% |
| ! | GCAACCCGCCGCCTTTTTGA+AGG | - | chr3.1:78888965-78888984 | None:intergenic | 60.0% |
| GGTGCGCCTTCTGCTGGTGA+CGG | + | chr3.1:78887031-78887050 | MS.gene06236:CDS | 65.0% | |
| GTCAGGGCTCTCGAGGCTGA+AGG | + | chr3.1:78889723-78889742 | MS.gene06236:intron | 65.0% | |
| TCCCCACCGTCACCAGCAGA+AGG | - | chr3.1:78887040-78887059 | None:intergenic | 65.0% | |
| TGACGGTGGGGAAGCGGAGA+AGG | + | chr3.1:78887048-78887067 | MS.gene06236:CDS | 65.0% | |
| ! | TGGTGGTAGTGCTGGGAGCG+GGG | + | chr3.1:78887192-78887211 | MS.gene06236:CDS | 65.0% |
| !! | CGCCTTCTGCTGGTGACGGT+GGG | + | chr3.1:78887035-78887054 | MS.gene06236:CDS | 65.0% |
| !! | GCCTTCTGCTGGTGACGGTG+GGG | + | chr3.1:78887036-78887055 | MS.gene06236:CDS | 65.0% |
| !! | TGCTGGTGACGGTGGGGAAG+CGG | + | chr3.1:78887042-78887061 | MS.gene06236:CDS | 65.0% |
| ! | GGTAGTGCTGGGAGCGGGGT+TGG | + | chr3.1:78887196-78887215 | MS.gene06236:CDS | 70.0% |
| !! | GCGCCTTCTGCTGGTGACGG+TGG | + | chr3.1:78887034-78887053 | MS.gene06236:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 78886643 | 78891971 | 78886643 | ID=MS.gene06236 |
| chr3.1 | mRNA | 78886643 | 78891971 | 78886643 | ID=MS.gene06236.t1;Parent=MS.gene06236 |
| chr3.1 | exon | 78886643 | 78886709 | 78886643 | ID=MS.gene06236.t1.exon1;Parent=MS.gene06236.t1 |
| chr3.1 | CDS | 78886643 | 78886709 | 78886643 | ID=cds.MS.gene06236.t1;Parent=MS.gene06236.t1 |
| chr3.1 | exon | 78886786 | 78887339 | 78886786 | ID=MS.gene06236.t1.exon2;Parent=MS.gene06236.t1 |
| chr3.1 | CDS | 78886786 | 78887339 | 78886786 | ID=cds.MS.gene06236.t1;Parent=MS.gene06236.t1 |
| chr3.1 | exon | 78888530 | 78889021 | 78888530 | ID=MS.gene06236.t1.exon3;Parent=MS.gene06236.t1 |
| chr3.1 | CDS | 78888530 | 78889021 | 78888530 | ID=cds.MS.gene06236.t1;Parent=MS.gene06236.t1 |
| chr3.1 | exon | 78889471 | 78889604 | 78889471 | ID=MS.gene06236.t1.exon4;Parent=MS.gene06236.t1 |
| chr3.1 | CDS | 78889471 | 78889604 | 78889471 | ID=cds.MS.gene06236.t1;Parent=MS.gene06236.t1 |
| chr3.1 | exon | 78889728 | 78889777 | 78889728 | ID=MS.gene06236.t1.exon5;Parent=MS.gene06236.t1 |
| chr3.1 | CDS | 78889728 | 78889777 | 78889728 | ID=cds.MS.gene06236.t1;Parent=MS.gene06236.t1 |
| chr3.1 | exon | 78891518 | 78891663 | 78891518 | ID=MS.gene06236.t1.exon6;Parent=MS.gene06236.t1 |
| chr3.1 | CDS | 78891518 | 78891663 | 78891518 | ID=cds.MS.gene06236.t1;Parent=MS.gene06236.t1 |
| chr3.1 | exon | 78891792 | 78891971 | 78891792 | ID=MS.gene06236.t1.exon7;Parent=MS.gene06236.t1 |
| chr3.1 | CDS | 78891792 | 78891971 | 78891792 | ID=cds.MS.gene06236.t1;Parent=MS.gene06236.t1 |
| Gene Sequence |
| Protein sequence |
