Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96593.t1 | XP_003598062.2 | 97.5 | 709 | 18 | 0 | 1 | 709 | 1 | 709 | 0.00E+00 | 1358.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96593.t1 | Q9ZRV4 | 69.7 | 706 | 210 | 1 | 4 | 709 | 26 | 727 | 3.9e-285 | 981.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96593.t1 | G7J070 | 97.5 | 709 | 18 | 0 | 1 | 709 | 1 | 709 | 0.0e+00 | 1358.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058794 | MS.gene96593 | 0.853282 | 2.65E-61 | -1.69E-46 |
| MS.gene058795 | MS.gene96593 | 0.803515 | 3.36E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene035194 | MS.gene96593 | PPI |
| MS.gene96593 | MS.gene07203 | PPI |
| MS.gene96593 | MS.gene038750 | PPI |
| MS.gene08109 | MS.gene96593 | PPI |
| MS.gene060573 | MS.gene96593 | PPI |
| MS.gene96593 | MS.gene64888 | PPI |
| MS.gene06380 | MS.gene96593 | PPI |
| MS.gene23437 | MS.gene96593 | PPI |
| MS.gene72658 | MS.gene96593 | PPI |
| MS.gene96593 | MS.gene018651 | PPI |
| MS.gene96593 | MS.gene28806 | PPI |
| MS.gene96593 | MS.gene050408 | PPI |
| MS.gene044567 | MS.gene96593 | PPI |
| MS.gene04418 | MS.gene96593 | PPI |
| MS.gene96593 | MS.gene005611 | PPI |
| MS.gene96593 | MS.gene072703 | PPI |
| MS.gene86545 | MS.gene96593 | PPI |
| MS.gene05640 | MS.gene96593 | PPI |
| MS.gene049266 | MS.gene96593 | PPI |
| MS.gene07047 | MS.gene96593 | PPI |
| MS.gene96593 | MS.gene013296 | PPI |
| MS.gene96593 | MS.gene96949 | PPI |
| MS.gene96593 | MS.gene65331 | PPI |
| MS.gene20720 | MS.gene96593 | PPI |
| MS.gene04079 | MS.gene96593 | PPI |
| MS.gene96593 | MS.gene40912 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96593.t1 | MTR_3g005810 | 97.461 | 709 | 18 | 0 | 1 | 709 | 1 | 709 | 0.0 | 1443 |
| MS.gene96593.t1 | MTR_1g088720 | 30.240 | 334 | 221 | 8 | 7 | 333 | 8 | 336 | 3.02e-35 | 144 |
| MS.gene96593.t1 | MTR_5g024250 | 29.710 | 276 | 166 | 8 | 7 | 269 | 4 | 264 | 2.61e-20 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96593.t1 | AT4G09140 | 69.688 | 706 | 210 | 1 | 4 | 709 | 26 | 727 | 0.0 | 1028 |
| MS.gene96593.t1 | AT4G09140 | 64.674 | 552 | 191 | 1 | 158 | 709 | 1 | 548 | 0.0 | 744 |
| MS.gene96593.t1 | AT4G02460 | 30.499 | 341 | 225 | 7 | 7 | 340 | 17 | 352 | 6.27e-37 | 148 |
| MS.gene96593.t1 | AT4G02460 | 30.499 | 341 | 225 | 7 | 7 | 340 | 17 | 352 | 7.15e-37 | 149 |
| MS.gene96593.t1 | AT4G35520 | 29.044 | 272 | 171 | 8 | 7 | 269 | 4 | 262 | 6.59e-22 | 102 |
| MS.gene96593.t1 | AT4G35520 | 29.044 | 272 | 171 | 8 | 7 | 269 | 4 | 262 | 7.03e-22 | 102 |
| MS.gene96593.t1 | AT4G35520 | 30.081 | 246 | 156 | 6 | 7 | 243 | 4 | 242 | 8.99e-20 | 95.1 |
| MS.gene96593.t1 | AT4G35520 | 30.081 | 246 | 156 | 6 | 7 | 243 | 4 | 242 | 9.69e-20 | 95.1 |
| MS.gene96593.t1 | AT4G35520 | 30.081 | 246 | 156 | 6 | 7 | 243 | 4 | 242 | 1.10e-19 | 94.7 |
| MS.gene96593.t1 | AT4G35520 | 30.081 | 246 | 156 | 6 | 7 | 243 | 4 | 242 | 1.26e-19 | 94.7 |
| MS.gene96593.t1 | AT4G02460 | 24.900 | 249 | 175 | 7 | 99 | 340 | 11 | 254 | 2.65e-13 | 73.9 |
| MS.gene96593.t1 | AT4G02460 | 24.900 | 249 | 175 | 7 | 99 | 340 | 11 | 254 | 3.29e-13 | 73.9 |
Find 149 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCGCTAGGCGTTGGATTT+TGG | 0.110433 | 3.1:+1121279 | None:intergenic |
| GTCTTTGATTGTAAGGTTTA+TGG | 0.202761 | 3.1:+1121159 | None:intergenic |
| CCTGAGTTTGTGCTTAGTTT+AGG | 0.245169 | 3.1:-1112699 | MS.gene96593:CDS |
| CTGAGTTTGTGCTTAGTTTA+GGG | 0.247718 | 3.1:-1112698 | MS.gene96593:CDS |
| GTTCTAACCAACTTATTTAC+TGG | 0.258224 | 3.1:+1116102 | None:intergenic |
| TTTCAAACCACCTCCTTCTA+TGG | 0.261404 | 3.1:-1110745 | MS.gene96593:CDS |
| TTCGAAGTTGTCTGCGTTTG+AGG | 0.262755 | 3.1:-1121050 | MS.gene96593:CDS |
| TTTGCAGAGGATTACGTCTA+TGG | 0.281439 | 3.1:-1121026 | MS.gene96593:CDS |
| ACAATTGAAATATATATAAA+AGG | 0.283295 | 3.1:+1117729 | None:intergenic |
| GGTATGCTGGAGGAGTATTT+TGG | 0.292415 | 3.1:-1112801 | MS.gene96593:CDS |
| GATGCCATCAGAACAGTTTA+TGG | 0.295437 | 3.1:-1118453 | MS.gene96593:CDS |
| CGTGAAAGACTTGATTATAT+TGG | 0.303621 | 3.1:-1113843 | MS.gene96593:CDS |
| AAGGCCAATTGCATGGTTAC+AGG | 0.305312 | 3.1:-1120937 | MS.gene96593:intron |
| AGGCCCTGTGCTGCTGTAAA+AGG | 0.310412 | 3.1:-1119290 | MS.gene96593:CDS |
| ATAAAAGGCTTAGATGCTTT+AGG | 0.329580 | 3.1:+1117744 | None:intergenic |
| TGAGAATCTATTCTATAATA+TGG | 0.337500 | 3.1:-1118764 | MS.gene96593:CDS |
| TGGCATTCATATTGATGATC+AGG | 0.346186 | 3.1:-1112781 | MS.gene96593:CDS |
| TCAAACAGTTTCAGCTGCTC+TGG | 0.349043 | 3.1:-1112282 | MS.gene96593:CDS |
| GTTCGTACCTCTCTCTTTGT+TGG | 0.351550 | 3.1:+1117672 | None:intergenic |
| CAGCAAGTTCTCAGCCGTTT+TGG | 0.360552 | 3.1:-1113902 | MS.gene96593:CDS |
| GACCGCCGTCTTTGATTGTA+AGG | 0.364499 | 3.1:+1121152 | None:intergenic |
| TGTAAAAGGAACACAGATAA+TGG | 0.367128 | 3.1:-1119276 | MS.gene96593:intron |
| TTGAAATGTACGTGCATCAT+TGG | 0.368233 | 3.1:+1117073 | None:intergenic |
| TGATAACTTCCTGATTTAAG+AGG | 0.384335 | 3.1:+1117138 | None:intergenic |
| TGAGTTCTATAGAATCTTGT+AGG | 0.400669 | 3.1:+1114975 | None:intergenic |
| ATTACGTCTATGGGGTTTAG+AGG | 0.400674 | 3.1:-1121016 | MS.gene96593:CDS |
| CCTCCTTCTATGGCTACTAA+TGG | 0.417391 | 3.1:-1110735 | MS.gene96593:CDS |
| ATGCCATCAGAACAGTTTAT+GGG | 0.417980 | 3.1:-1118452 | MS.gene96593:CDS |
| TTACTTCGCCGGCGGCGATT+CGG | 0.429131 | 3.1:+1121245 | None:intergenic |
| CTAACCTGTAACCATGCAAT+TGG | 0.429908 | 3.1:+1120933 | None:intergenic |
| CTCCATGACACCATCTCTAT+AGG | 0.431084 | 3.1:+1119322 | None:intergenic |
| ATAGGTGAGCCTCTTAAATC+AGG | 0.431743 | 3.1:-1117147 | MS.gene96593:intron |
| TACTAATGGAACCTTTGTTA+AGG | 0.435371 | 3.1:-1110721 | MS.gene96593:intron |
| CAATCCCTCACCAGATGGAT+TGG | 0.436586 | 3.1:+1112226 | None:intergenic |
| TTTATGTTTCTCAGATAGAC+TGG | 0.439450 | 3.1:-1117820 | MS.gene96593:intron |
| TTTACAGCAGCACAGGGCCT+AGG | 0.449578 | 3.1:+1119293 | None:intergenic |
| CGACTGATTCCGCTAGGCGT+TGG | 0.453854 | 3.1:+1121272 | None:intergenic |
| GAAAACAAAGGCTGGTATGC+TGG | 0.453883 | 3.1:-1112814 | MS.gene96593:CDS |
| GAAGACACTACAAAATTCTT+CGG | 0.456465 | 3.1:-1118731 | MS.gene96593:CDS |
| GTTCCATTAGTAGCCATAGA+AGG | 0.456923 | 3.1:+1110732 | None:intergenic |
| TTGCATGGGCCCAGCGTGAA+TGG | 0.464113 | 3.1:-1110806 | MS.gene96593:CDS |
| CATCTATCCTGTAGGAATGA+TGG | 0.469466 | 3.1:-1114259 | MS.gene96593:intron |
| TTTCTGAAGCTGAGATTGCA+TGG | 0.470561 | 3.1:-1110821 | MS.gene96593:CDS |
| TTAGCTGAATGGCATTGAAA+TGG | 0.472900 | 3.1:+1113879 | None:intergenic |
| TTGCAACATCATATCAATTG+AGG | 0.473049 | 3.1:+1110310 | None:intergenic |
| CCGATGTTGCCCAATCCATC+TGG | 0.474634 | 3.1:-1112236 | MS.gene96593:CDS |
| TTCCCATACCCGGTGGGGTA+GGG | 0.475091 | 3.1:+1116232 | None:intergenic |
| GGCATTCATATTGATGATCA+GGG | 0.480584 | 3.1:-1112780 | MS.gene96593:CDS |
| AATATAATCAAGTCTTTCAC+GGG | 0.482818 | 3.1:+1113845 | None:intergenic |
| TCAGGGATGCGATCCATGTC+CGG | 0.485690 | 3.1:+1112717 | None:intergenic |
| TACCCGGTGGGGTAGGGCTG+AGG | 0.486411 | 3.1:+1116238 | None:intergenic |
| TTCTGAAGCTGAGATTGCAT+GGG | 0.487761 | 3.1:-1110820 | MS.gene96593:CDS |
| CCTAAACTAAGCACAAACTC+AGG | 0.490379 | 3.1:+1112699 | None:intergenic |
| CTTGATTATATTGGCACTGA+AGG | 0.492658 | 3.1:-1113834 | MS.gene96593:CDS |
| TTGCAGAGGATTACGTCTAT+GGG | 0.495592 | 3.1:-1121025 | MS.gene96593:CDS |
| TCATACTTGTGGCAGACAGC+TGG | 0.499733 | 3.1:-1116303 | MS.gene96593:intron |
| GTATGCCGCTCACACAAAAT+CGG | 0.504702 | 3.1:+1121076 | None:intergenic |
| TGGCATTGAAATGGCCAAAA+CGG | 0.505388 | 3.1:+1113888 | None:intergenic |
| GAGAATGCCTGTGATAATAC+TGG | 0.506862 | 3.1:-1112161 | MS.gene96593:intron |
| TAGAGATGGTGTCATGGAGC+AGG | 0.507145 | 3.1:-1119318 | MS.gene96593:CDS |
| CAATATAATCAAGTCTTTCA+CGG | 0.507914 | 3.1:+1113844 | None:intergenic |
| CAAACAGTTTCAGCTGCTCT+GGG | 0.509172 | 3.1:-1112281 | MS.gene96593:CDS |
| TGTCAATTTCTCTTGCAGAA+AGG | 0.511158 | 3.1:-1118653 | MS.gene96593:intron |
| GGCTGGATCACTTAGCTGAA+TGG | 0.514732 | 3.1:+1113868 | None:intergenic |
| ACTGTTACTACTATTACTAA+AGG | 0.515263 | 3.1:-1120956 | MS.gene96593:CDS |
| AATCCCTCACCAGATGGATT+GGG | 0.516217 | 3.1:+1112227 | None:intergenic |
| TGGGCGTTGGATTACTTCGC+CGG | 0.519195 | 3.1:+1121234 | None:intergenic |
| ATTGACATTGGTATGATGTA+TGG | 0.519238 | 3.1:+1118669 | None:intergenic |
| GGATGATTACTCAAAGATAG+TGG | 0.524793 | 3.1:-1118710 | MS.gene96593:CDS |
| GAAAGTGCCAGTAAATAAGT+TGG | 0.524800 | 3.1:-1116109 | MS.gene96593:CDS |
| TTGCAAATGTTGTAAACTTG+AGG | 0.530370 | 3.1:-1114158 | MS.gene96593:intron |
| TTTCCCATACCCGGTGGGGT+AGG | 0.533882 | 3.1:+1116231 | None:intergenic |
| GATCCATGTCCGGAGTATAC+TGG | 0.534406 | 3.1:+1112727 | None:intergenic |
| ATCAATAACAACTATGACCC+TGG | 0.540120 | 3.1:-1114926 | MS.gene96593:intron |
| TGCAACATCATATCAATTGA+GGG | 0.543538 | 3.1:+1110311 | None:intergenic |
| GTCGTCAACCGAATCGCCGC+CGG | 0.544875 | 3.1:-1121253 | MS.gene96593:CDS |
| TAACCTCAGCCCTACCCCAC+CGG | 0.548727 | 3.1:-1116241 | MS.gene96593:CDS |
| TTGTATTGACCATTCACGCT+GGG | 0.551512 | 3.1:+1110797 | None:intergenic |
| TATATTGGCACTGAAGGAAG+AGG | 0.554059 | 3.1:-1113828 | MS.gene96593:CDS |
| TAGGCGTGTAATCTGCCTGC+AGG | 0.557560 | 3.1:+1116066 | None:intergenic |
| ACAGATTCATTAGATCCTGC+AGG | 0.558475 | 3.1:-1116081 | MS.gene96593:CDS |
| TATCATTGAGAAGATACAAT+CGG | 0.558745 | 3.1:-1117120 | MS.gene96593:CDS |
| CAAGTCTCCGACGACGGTCA+CGG | 0.563967 | 3.1:-1121118 | MS.gene96593:CDS |
| CTGATTCAAGTCTCCGACGA+CGG | 0.566433 | 3.1:-1121124 | MS.gene96593:CDS |
| CGCAAACATTACCTTAACAA+AGG | 0.567048 | 3.1:+1110710 | None:intergenic |
| GATCTGCTGAAAACAAAGGC+TGG | 0.567731 | 3.1:-1112822 | MS.gene96593:CDS |
| ACATTGACATCAATATTCTC+AGG | 0.568147 | 3.1:+1117699 | None:intergenic |
| TTACGGCGGAGACTGGGCGT+TGG | 0.569135 | 3.1:+1121221 | None:intergenic |
| AAAAGCAATCCCTCACCAGA+TGG | 0.569149 | 3.1:+1112221 | None:intergenic |
| CCAGATGGATTGGGCAACAT+CGG | 0.571394 | 3.1:+1112236 | None:intergenic |
| GTAAAGCACTGCACATATGT+TGG | 0.572709 | 3.1:-1114231 | MS.gene96593:CDS |
| TCTGCAAGAGAAATTGACAT+TGG | 0.573051 | 3.1:+1118657 | None:intergenic |
| GACCCCATAAACTGTTCTGA+TGG | 0.573196 | 3.1:+1118449 | None:intergenic |
| ATTACTAAAGGCCAATTGCA+TGG | 0.575626 | 3.1:-1120944 | MS.gene96593:CDS |
| GTCCATACCAGTATTATCAC+AGG | 0.577956 | 3.1:+1112154 | None:intergenic |
| TCTCAGATAGACTGGTTGAG+TGG | 0.579246 | 3.1:-1117812 | MS.gene96593:intron |
| GTATACTGGTCAAGTATCAC+AGG | 0.580775 | 3.1:+1112741 | None:intergenic |
| AAACATTTCCCATACCCGGT+GGG | 0.580830 | 3.1:+1116226 | None:intergenic |
| AACCTCAGCCCTACCCCACC+GGG | 0.583112 | 3.1:-1116240 | MS.gene96593:intron |
| GTGTCACTTTGAATGCAGTA+AGG | 0.584850 | 3.1:-1116008 | MS.gene96593:intron |
| GGCATCAAGCCTTGATGATG+TGG | 0.587629 | 3.1:+1118470 | None:intergenic |
| CGGTGATTGAATCAACATTG+AGG | 0.588119 | 3.1:-1117100 | MS.gene96593:CDS |
| GATGGATTGGGCAACATCGG+TGG | 0.588877 | 3.1:+1112239 | None:intergenic |
| CTCTCGTACTAATAAGAGCA+AGG | 0.589552 | 3.1:-1116268 | MS.gene96593:CDS |
| GCACTGCACATATGTTGGAA+TGG | 0.589828 | 3.1:-1114226 | MS.gene96593:CDS |
| AACATTTCCCATACCCGGTG+GGG | 0.591924 | 3.1:+1116227 | None:intergenic |
| GCTTGCTAGTATGACTTATG+TGG | 0.595892 | 3.1:-1120987 | MS.gene96593:CDS |
| ATTATCACAGGCATTCTCCA+TGG | 0.601535 | 3.1:+1112166 | None:intergenic |
| GTGTCATGGAGCAGGAACCT+AGG | 0.602402 | 3.1:-1119310 | MS.gene96593:CDS |
| AAGGTTTATGGAAGTTGATG+CGG | 0.604314 | 3.1:+1121171 | None:intergenic |
| CTGCGTTTGAGGATTTGCAG+AGG | 0.605477 | 3.1:-1121039 | MS.gene96593:CDS |
| GGTTGACGACTGATTCCGCT+AGG | 0.605700 | 3.1:+1121266 | None:intergenic |
| TTAGTAGCCATAGAAGGAGG+TGG | 0.606651 | 3.1:+1110738 | None:intergenic |
| CTAAACTAAGCACAAACTCA+GGG | 0.607686 | 3.1:+1112700 | None:intergenic |
| ATCCTATAGAGATGGTGTCA+TGG | 0.613728 | 3.1:-1119324 | MS.gene96593:CDS |
| TTGCCCAATCCATCTGGTGA+GGG | 0.615762 | 3.1:-1112230 | MS.gene96593:CDS |
| AGGTTGATTGGGATGATGAA+AGG | 0.616203 | 3.1:-1112313 | MS.gene96593:CDS |
| ATACAGTAGCCACATCATCA+AGG | 0.617880 | 3.1:-1118479 | MS.gene96593:CDS |
| GCCTACATGCAAGTTATACC+TGG | 0.618767 | 3.1:-1116048 | MS.gene96593:CDS |
| TTTAGGGTATCCTATAGAGA+TGG | 0.620969 | 3.1:-1119332 | MS.gene96593:intron |
| GTTGCCCAATCCATCTGGTG+AGG | 0.621707 | 3.1:-1112231 | MS.gene96593:CDS |
| TCGAATACCGTGACCGTCGT+CGG | 0.623101 | 3.1:+1121111 | None:intergenic |
| CTTGCTCTTATTAGTACGAG+AGG | 0.624813 | 3.1:+1116269 | None:intergenic |
| TATTCTATAATATGGCTGCA+AGG | 0.627616 | 3.1:-1118756 | MS.gene96593:CDS |
| GTTGTATTGACCATTCACGC+TGG | 0.629559 | 3.1:+1110796 | None:intergenic |
| TGACCAGTATACTCCGGACA+TGG | 0.629857 | 3.1:-1112730 | MS.gene96593:CDS |
| TTGAGGGAGACAACAACAGT+CGG | 0.629962 | 3.1:+1110327 | None:intergenic |
| AGATAGTGGATGTTGTCAGT+CGG | 0.631946 | 3.1:-1118696 | MS.gene96593:CDS |
| CACAGATCTGCTGAAAACAA+AGG | 0.634034 | 3.1:-1112826 | MS.gene96593:CDS |
| ATAAACCTTACAATCAAAGA+CGG | 0.639285 | 3.1:-1121157 | MS.gene96593:CDS |
| TGCCATCAGAACAGTTTATG+GGG | 0.642839 | 3.1:-1118451 | MS.gene96593:CDS |
| TACATGCAAGTTATACCTGG+TGG | 0.650299 | 3.1:-1116045 | MS.gene96593:CDS |
| TGGAAGTTGATGCGGCGTCG+AGG | 0.655630 | 3.1:+1121179 | None:intergenic |
| ACCAGGTATAACTTGCATGT+AGG | 0.658521 | 3.1:+1116047 | None:intergenic |
| TGCAGAGGATTACGTCTATG+GGG | 0.660337 | 3.1:-1121024 | MS.gene96593:CDS |
| GCTCCTTCGTTGTCTAACTG+AGG | 0.662697 | 3.1:+1114997 | None:intergenic |
| AACAAAGGCTGGTATGCTGG+AGG | 0.667613 | 3.1:-1112811 | MS.gene96593:CDS |
| CCATTAGTAGCCATAGAAGG+AGG | 0.673543 | 3.1:+1110735 | None:intergenic |
| ACCCAAAATCCAACGCCTAG+CGG | 0.675566 | 3.1:-1121281 | MS.gene96593:CDS |
| GATACTTGACCAGTATACTC+CGG | 0.679952 | 3.1:-1112736 | MS.gene96593:CDS |
| TGTGCATCCAACAAAGAGAG+AGG | 0.681638 | 3.1:-1117679 | MS.gene96593:intron |
| TTGACATCAATATTCTCAGG+AGG | 0.686791 | 3.1:+1117702 | None:intergenic |
| ATATAATCAAGTCTTTCACG+GGG | 0.688244 | 3.1:+1113846 | None:intergenic |
| GCGTTGGATTACTTCGCCGG+CGG | 0.693192 | 3.1:+1121237 | None:intergenic |
| GATCCTCAGTTAGACAACGA+AGG | 0.703074 | 3.1:-1115000 | MS.gene96593:CDS |
| AACCTTACAATCAAAGACGG+CGG | 0.709529 | 3.1:-1121154 | MS.gene96593:CDS |
| TGCTGCCAAGAAAATCACGA+TGG | 0.717164 | 3.1:-1118331 | MS.gene96593:CDS |
| TCGTACTAATAAGAGCAAGG+AGG | 0.754469 | 3.1:-1116265 | MS.gene96593:CDS |
| TATAATCAAGTCTTTCACGG+GGG | 0.793097 | 3.1:+1113847 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 1110323 | 1121314 | 1110323 | ID=MS.gene96593 |
| chr3.1 | mRNA | 1110323 | 1121314 | 1110323 | ID=MS.gene96593.t1;Parent=MS.gene96593 |
| chr3.1 | exon | 1120938 | 1121314 | 1120938 | ID=MS.gene96593.t1.exon1;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1120938 | 1121314 | 1120938 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| chr3.1 | exon | 1119277 | 1119349 | 1119277 | ID=MS.gene96593.t1.exon2;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1119277 | 1119349 | 1119277 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| chr3.1 | exon | 1118654 | 1118788 | 1118654 | ID=MS.gene96593.t1.exon3;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1118654 | 1118788 | 1118654 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| chr3.1 | exon | 1118316 | 1118526 | 1118316 | ID=MS.gene96593.t1.exon4;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1118316 | 1118526 | 1118316 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| chr3.1 | exon | 1117680 | 1117828 | 1117680 | ID=MS.gene96593.t1.exon5;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1117680 | 1117828 | 1117680 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| chr3.1 | exon | 1117067 | 1117165 | 1117067 | ID=MS.gene96593.t1.exon6;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1117067 | 1117165 | 1117067 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| chr3.1 | exon | 1116241 | 1116310 | 1116241 | ID=MS.gene96593.t1.exon7;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1116241 | 1116310 | 1116241 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| chr3.1 | exon | 1116009 | 1116144 | 1116009 | ID=MS.gene96593.t1.exon8;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1116009 | 1116144 | 1116009 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| chr3.1 | exon | 1114927 | 1115021 | 1114927 | ID=MS.gene96593.t1.exon9;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1114927 | 1115021 | 1114927 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| chr3.1 | exon | 1114159 | 1114267 | 1114159 | ID=MS.gene96593.t1.exon10;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1114159 | 1114267 | 1114159 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| chr3.1 | exon | 1113775 | 1113940 | 1113775 | ID=MS.gene96593.t1.exon11;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1113775 | 1113940 | 1113775 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| chr3.1 | exon | 1112692 | 1112853 | 1112692 | ID=MS.gene96593.t1.exon12;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1112692 | 1112853 | 1112692 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| chr3.1 | exon | 1112162 | 1112333 | 1112162 | ID=MS.gene96593.t1.exon13;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1112162 | 1112333 | 1112162 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| chr3.1 | exon | 1110722 | 1110882 | 1110722 | ID=MS.gene96593.t1.exon14;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1110722 | 1110882 | 1110722 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| chr3.1 | exon | 1110323 | 1110352 | 1110323 | ID=MS.gene96593.t1.exon15;Parent=MS.gene96593.t1 |
| chr3.1 | CDS | 1110323 | 1110352 | 1110323 | ID=cds.MS.gene96593.t1;Parent=MS.gene96593.t1 |
| Gene Sequence |
| Protein sequence |
