AlfalfaGEDB | MS.gene28963

M. sativa cultivar XinJiangDaYe / MS.gene28963

KEGG: K01802
GO: GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564
PFAM: PF00160.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28963.t1	XP_003607272.1	95.9	172	7	0	1	172	1	172	5.70E-93	350.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28963.t1	Q8W171	88.4	172	20	0	1	172	1	172	4.3e-89	328.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28963.t1	G7JPK2	95.9	172	7	0	1	172	1	172	4.1e-93	350.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene28963	MS.gene47195	PPI
MS.gene050574	MS.gene28963	PPI
MS.gene39668	MS.gene28963	PPI
MS.gene28963	MS.gene024514	PPI
MS.gene28963	MS.gene72809	PPI
MS.gene28963	MS.gene55545	PPI
MS.gene68752	MS.gene28963	PPI
MS.gene88451	MS.gene28963	PPI
MS.gene28703	MS.gene28963	PPI
MS.gene83474	MS.gene28963	PPI
MS.gene050281	MS.gene28963	PPI
MS.gene22872	MS.gene28963	PPI
MS.gene025980	MS.gene28963	PPI
MS.gene28963	MS.gene007179	PPI
MS.gene28963	MS.gene23546	PPI
MS.gene28963	MS.gene028111	PPI
MS.gene28963	MS.gene014216	PPI
MS.gene82121	MS.gene28963	PPI
MS.gene28963	MS.gene052266	PPI
MS.gene28963	MS.gene063104	PPI
MS.gene28963	MS.gene051153	PPI
MS.gene063104	MS.gene28963	PPI
MS.gene063787	MS.gene28963	PPI
MS.gene68153	MS.gene28963	PPI
MS.gene28963	MS.gene003412	PPI
MS.gene28963	MS.gene048458	PPI
MS.gene28963	MS.gene04515	PPI
MS.gene28963	MS.gene074045	PPI
MS.gene052269	MS.gene28963	PPI
MS.gene23663	MS.gene28963	PPI
MS.gene28963	MS.gene04526	PPI
MS.gene28963	MS.gene019366	PPI
MS.gene28963	MS.gene050281	PPI
MS.gene61767	MS.gene28963	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28963.t1	MTR_4g075290	95.930	172	7	0	1	172	1	172	9.03e-122	340
MS.gene28963.t1	MTR_3g117750	88.095	168	20	0	5	172	13	180	2.10e-110	312
MS.gene28963.t1	MTR_7g116340	77.326	172	39	0	1	172	1	172	2.65e-100	286
MS.gene28963.t1	MTR_3g463900	68.263	167	53	0	5	171	35	201	1.74e-83	245
MS.gene28963.t1	MTR_3g070500	65.476	168	58	0	5	172	65	232	2.70e-80	238
MS.gene28963.t1	MTR_7g095750	64.327	171	60	1	3	172	6	176	5.90e-78	244
MS.gene28963.t1	MTR_8g079690	60.571	175	65	3	1	172	1	174	7.82e-70	215
MS.gene28963.t1	MTR_1g085560	65.753	146	43	1	5	150	86	224	4.32e-68	207
MS.gene28963.t1	MTR_8g040180	59.064	171	66	3	3	171	17	185	8.81e-68	204
MS.gene28963.t1	MTR_7g110980	59.524	168	60	2	5	171	97	257	1.65e-67	206
MS.gene28963.t1	MTR_1g117010	59.649	171	58	3	5	171	78	241	5.02e-66	202
MS.gene28963.t1	MTR_1g117010	59.649	171	58	3	5	171	78	241	5.02e-66	202
MS.gene28963.t1	MTR_4g086760	57.714	175	68	3	1	171	1	173	3.95e-65	202
MS.gene28963.t1	MTR_4g086760	57.714	175	68	3	1	171	1	173	4.23e-65	203
MS.gene28963.t1	MTR_4g086760	57.714	175	68	3	1	171	1	173	4.84e-65	202
MS.gene28963.t1	MTR_3g070500	70.161	124	37	0	5	128	65	188	2.19e-62	191
MS.gene28963.t1	MTR_4g073650	53.571	168	77	1	5	171	47	214	4.06e-60	186
MS.gene28963.t1	MTR_3g107660	53.846	169	77	1	3	170	9	177	1.19e-54	185
MS.gene28963.t1	MTR_1g011980	52.071	169	79	2	3	170	6	173	1.56e-48	167
MS.gene28963.t1	MTR_3g070500	70.707	99	29	0	5	103	65	163	7.35e-48	153
MS.gene28963.t1	MTR_3g070500	70.408	98	29	0	5	102	65	162	1.41e-47	152
MS.gene28963.t1	MTR_7g105220	50.725	138	52	5	18	152	19	143	4.88e-35	120
MS.gene28963.t1	MTR_8g036015	51.049	143	54	5	18	157	10	139	1.03e-34	119
MS.gene28963.t1	MTR_2g085075	48.980	147	59	5	18	162	471	603	3.50e-34	126
MS.gene28963.t1	MTR_5g015500	49.265	136	57	4	18	152	314	438	8.79e-30	114
MS.gene28963.t1	MTR_5g015500	49.265	136	57	4	18	152	354	478	1.43e-29	113
MS.gene28963.t1	MTR_3g085705	48.760	121	57	3	37	157	7	122	2.33e-29	105
MS.gene28963.t1	MTR_6g084140	37.342	158	78	7	18	165	27	173	3.36e-20	87.0
MS.gene28963.t1	MTR_6g084140	37.342	158	78	7	18	165	10	156	3.47e-20	87.0
MS.gene28963.t1	MTR_8g442420	36.709	158	79	7	18	165	10	156	4.87e-19	83.6
MS.gene28963.t1	MTR_2g023120	42.742	124	58	5	18	139	22	134	1.77e-17	79.3
MS.gene28963.t1	MTR_1g094065	35.526	152	72	6	18	164	89	219	1.69e-14	68.9
MS.gene28963.t1	MTR_1g035360	30.573	157	91	5	18	171	88	229	4.46e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28963.t1	AT2G16600	83.626	171	28	0	2	172	3	173	5.29e-108	306
MS.gene28963.t1	AT2G21130	83.626	171	28	0	2	172	3	173	3.86e-107	303
MS.gene28963.t1	AT4G38740	83.140	172	29	0	1	172	1	172	8.29e-106	300
MS.gene28963.t1	AT4G34870	81.395	172	32	0	1	172	1	172	1.02e-101	290
MS.gene28963.t1	AT3G56070	74.269	171	44	0	1	171	1	171	3.11e-94	271
MS.gene28963.t1	AT3G56070	74.269	171	44	0	1	171	1	171	3.11e-94	271
MS.gene28963.t1	AT2G16600	71.930	171	26	1	2	172	3	151	8.84e-86	249
MS.gene28963.t1	AT2G29960	67.665	167	54	0	5	171	33	199	1.22e-82	243
MS.gene28963.t1	AT2G29960	67.665	167	54	0	5	171	33	199	1.22e-82	243
MS.gene28963.t1	AT3G63400	68.421	171	53	1	3	172	6	176	2.81e-81	246
MS.gene28963.t1	AT5G58710	65.868	167	57	0	5	171	36	202	1.17e-79	235
MS.gene28963.t1	AT3G55920	65.476	168	58	0	5	172	60	227	1.41e-79	236
MS.gene28963.t1	AT3G63400	68.421	171	53	1	3	172	6	176	2.13e-79	246
MS.gene28963.t1	AT3G63400	68.421	171	53	1	3	172	6	176	2.13e-79	246
MS.gene28963.t1	AT3G63400	68.421	171	53	1	3	172	6	176	2.13e-79	246
MS.gene28963.t1	AT2G29960	63.473	167	51	1	5	171	33	189	1.04e-73	219
MS.gene28963.t1	AT5G13120	64.327	171	50	3	5	171	87	250	7.71e-73	219
MS.gene28963.t1	AT5G13120	64.327	171	50	3	5	171	91	254	7.84e-73	220
MS.gene28963.t1	AT3G62030	62.500	168	55	2	5	171	95	255	7.65e-71	215
MS.gene28963.t1	AT3G62030	62.500	168	55	2	5	171	96	256	8.07e-71	215
MS.gene28963.t1	AT3G62030	62.500	168	55	2	5	171	149	309	4.41e-70	214
MS.gene28963.t1	AT2G38730	59.064	171	66	3	3	171	31	199	6.55e-67	202
MS.gene28963.t1	AT2G15790	58.960	173	69	2	1	171	1	173	9.64e-66	205
MS.gene28963.t1	AT4G34960	52.976	168	78	1	5	171	48	215	9.03e-61	188
MS.gene28963.t1	AT3G22920	54.545	176	68	5	1	172	1	168	2.03e-59	185
MS.gene28963.t1	AT4G32420	50.888	169	82	1	3	170	6	174	5.43e-51	174
MS.gene28963.t1	AT4G32420	50.888	169	82	1	3	170	6	174	5.43e-51	174
MS.gene28963.t1	AT4G32420	50.888	169	82	1	3	170	6	174	5.43e-51	174
MS.gene28963.t1	AT4G32420	50.888	169	82	1	3	170	6	174	5.43e-51	174
MS.gene28963.t1	AT4G32420	51.592	157	75	1	3	158	6	162	1.06e-47	165
MS.gene28963.t1	AT4G34960	54.032	124	57	0	5	128	48	171	5.34e-47	151
MS.gene28963.t1	AT2G36130	45.399	163	70	6	2	163	8	152	5.35e-36	123
MS.gene28963.t1	AT1G01940	48.252	143	58	5	18	157	10	139	3.16e-33	115
MS.gene28963.t1	AT3G44600	48.980	147	59	6	18	162	485	617	5.82e-33	123
MS.gene28963.t1	AT5G67530	49.265	136	57	4	18	152	353	477	2.78e-29	112
MS.gene28963.t1	AT4G33060	46.400	125	54	5	18	140	22	135	9.26e-25	99.8
MS.gene28963.t1	AT1G53720	36.879	141	69	5	18	149	10	139	2.82e-18	80.9
MS.gene28963.t1	AT1G53720	36.879	141	69	5	18	149	10	139	5.33e-18	80.9

Find 68 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACTGAGATCCGTTGGTTCC+TGG	0.326133	4.4:-34797102	None:intergenic
CCTCCCTGACACATGAAGTT+AGG	0.347806	4.4:-34796961	None:intergenic
TTCGCCATGGAGAGGATTCC+AGG	0.356185	4.4:-34797072	None:intergenic
ATCAAGAAGCACACCGGTCC+TGG	0.379174	4.4:+34797054	MS.gene28963:CDS
GACGGAAAGCACGTCGTATT+CGG	0.401729	4.4:+34797156	MS.gene28963:CDS
CTAAGAGAGTTGACCGCAAT+CGG	0.418363	4.4:-34797265	None:intergenic
CGGTCAGGTTGTTGAAGGTC+TGG	0.429912	4.4:+34797176	MS.gene28963:CDS
CCGCAATCGGCGATCACGAC+TGG	0.431471	4.4:-34797252	None:intergenic
TCCATGGCGAACGCTGGTCC+AGG	0.445948	4.4:+34797084	MS.gene28963:CDS
GAGAAAGTCGGATCTGGATC+TGG	0.446422	4.4:+34797216	MS.gene28963:CDS
ACGGAAATTCTCGGCGGTGC+GGG	0.447901	4.4:-34796857	None:intergenic
GCTCTCTGCACCGGCGAGAA+AGG	0.448573	4.4:+34796880	MS.gene28963:CDS
GAGATCGAGAAAGTCGGATC+TGG	0.448823	4.4:+34797210	MS.gene28963:CDS
GGCGATCACGACTGGCTTCG+AGG	0.461154	4.4:-34797244	None:intergenic
GATCCCTAACTTCATGTGTC+AGG	0.471623	4.4:+34796957	MS.gene28963:CDS
GCAGAGAGCACGGAAATTCT+CGG	0.475097	4.4:-34796866	None:intergenic
CTCCCTGACACATGAAGTTA+GGG	0.480325	4.4:-34796960	None:intergenic
TTCACCAACGGAAACGGTAC+CGG	0.483169	4.4:+34796988	MS.gene28963:CDS
GTCATGTCGAAGAAAACCTT+AGG	0.493029	4.4:-34796778	None:intergenic
GTATTCGGTCAGGTTGTTGA+AGG	0.496891	4.4:+34797171	MS.gene28963:CDS
GTCGAGCCACTCTGTCTTAG+CGG	0.505495	4.4:-34797136	None:intergenic
GCCTCCGGTACCGTTTCCGT+TGG	0.509269	4.4:-34796992	None:intergenic
TCCGTAGATCGATTCGCCTC+CGG	0.512965	4.4:-34797007	None:intergenic
CATGGAGAGGATTCCAGGAC+CGG	0.517090	4.4:-34797067	None:intergenic
ACCGTCGGTGGCAACCCTGC+CGG	0.519458	4.4:+34796799	MS.gene28963:CDS
AAAGCACGTCGTATTCGGTC+AGG	0.529263	4.4:+34797161	MS.gene28963:CDS
ATCCTCTCCATGGCGAACGC+TGG	0.529724	4.4:+34797078	MS.gene28963:CDS
TCGAAGATGATACGTCCGGC+AGG	0.533363	4.4:-34796814	None:intergenic
GGTGATTTCACCAACGGAAA+CGG	0.538147	4.4:+34796982	MS.gene28963:CDS
TCCTGGACCAGCGTTCGCCA+TGG	0.539402	4.4:-34797085	None:intergenic
GGCGGTGCGGGGAGTGACAT+CGG	0.547631	4.4:-34796845	None:intergenic
CGGAAATTCTCGGCGGTGCG+GGG	0.549468	4.4:-34796856	None:intergenic
TGCAACCATGTCTAACCCTA+AGG	0.552767	4.4:+34796762	None:intergenic
GACGAAGAACTGAGATCCGT+TGG	0.556022	4.4:-34797109	None:intergenic
GGCAAACCACTCCACTTCAA+AGG	0.560943	4.4:+34796916	MS.gene28963:CDS
GCGGCCGACTCCTTTCTCGC+CGG	0.566187	4.4:-34796890	None:intergenic
ACCGGAGGCGAATCGATCTA+CGG	0.566609	4.4:+34797006	MS.gene28963:CDS
ATCCCTAACTTCATGTGTCA+GGG	0.567025	4.4:+34796958	MS.gene28963:CDS
TCCGGCAGGGTTGCCACCGA+CGG	0.568975	4.4:-34796800	None:intergenic
GAAGATCCTTTGAAGTGGAG+TGG	0.570002	4.4:-34796922	None:intergenic
GTTAGGGATCACACGGTGGA+AGG	0.570770	4.4:-34796944	None:intergenic
CACGGAAATTCTCGGCGGTG+CGG	0.574154	4.4:-34796858	None:intergenic
AATTTCCGTGCTCTCTGCAC+CGG	0.574186	4.4:+34796871	MS.gene28963:CDS
TCTCGCCGGTGCAGAGAGCA+CGG	0.577434	4.4:-34796876	None:intergenic
AAGCTCGAAGATGATACGTC+CGG	0.581315	4.4:-34796818	None:intergenic
CGGTCCTGGAATCCTCTCCA+TGG	0.589882	4.4:+34797068	MS.gene28963:CDS
TGAAGGTCTGGAAGTTGTGA+AGG	0.598033	4.4:+34797188	MS.gene28963:CDS
GAGAAAGGAGTCGGCCGCAG+CGG	0.599935	4.4:+34796895	MS.gene28963:CDS
TTCTTCGACATGACCGTCGG+TGG	0.600396	4.4:+34796787	MS.gene28963:CDS
GGAAGGAAGATCCTTTGAAG+TGG	0.600412	4.4:-34796927	None:intergenic
AGTGGAGTGGTTTGCCGCTG+CGG	0.604904	4.4:-34796909	None:intergenic
AACGCTGGTCCAGGAACCAA+CGG	0.606157	4.4:+34797093	MS.gene28963:CDS
GACCAGCGTTCGCCATGGAG+AGG	0.613724	4.4:-34797080	None:intergenic
TGCACCGGCGAGAAAGGAGT+CGG	0.616021	4.4:+34796886	MS.gene28963:CDS
CAGGGAGGTGATTTCACCAA+CGG	0.616760	4.4:+34796976	MS.gene28963:CDS
GTGAAGGAGATCGAGAAAGT+CGG	0.624253	4.4:+34797204	MS.gene28963:CDS
TCATGTCGAAGAAAACCTTA+GGG	0.626665	4.4:-34796777	None:intergenic
CGAAGATGATACGTCCGGCA+GGG	0.628794	4.4:-34796813	None:intergenic
GAAAACCTTAGGGTTAGACA+TGG	0.661297	4.4:-34796767	None:intergenic
GCTAAGACAGAGTGGCTCGA+CGG	0.664017	4.4:+34797138	MS.gene28963:CDS
ACATGAAGTTAGGGATCACA+CGG	0.667907	4.4:-34796951	None:intergenic
ACCAACGGAAACGGTACCGG+AGG	0.677978	4.4:+34796991	MS.gene28963:CDS
AATTTCATCAAGAAGCACAC+CGG	0.680067	4.4:+34797048	MS.gene28963:CDS
CCAGTCGTGATCGCCGATTG+CGG	0.685460	4.4:+34797252	MS.gene28963:CDS
CCTAACTTCATGTGTCAGGG+AGG	0.694044	4.4:+34796961	MS.gene28963:CDS
TCTGCACCGCTAAGACAGAG+TGG	0.718339	4.4:+34797130	MS.gene28963:CDS
TGAAGTTAGGGATCACACGG+TGG	0.759029	4.4:-34796948	None:intergenic
GAGAGCACGGAAATTCTCGG+CGG	0.786834	4.4:-34796863	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	TCATGTCGAAGAAAACCTTA+GGG	-	chr4.4:34796780-34796799	None:intergenic	35.0%
!	AATTTCATCAAGAAGCACAC+CGG	+	chr4.4:34797048-34797067	MS.gene28963:CDS	35.0%
	ACATGAAGTTAGGGATCACA+CGG	-	chr4.4:34796954-34796973	None:intergenic	40.0%
	ATCCCTAACTTCATGTGTCA+GGG	+	chr4.4:34796958-34796977	MS.gene28963:CDS	40.0%
	GTCATGTCGAAGAAAACCTT+AGG	-	chr4.4:34796781-34796800	None:intergenic	40.0%
	AAGCTCGAAGATGATACGTC+CGG	-	chr4.4:34796821-34796840	None:intergenic	45.0%
	CTAAGAGAGTTGACCGCAAT+CGG	-	chr4.4:34797268-34797287	None:intergenic	45.0%
	CTCCCTGACACATGAAGTTA+GGG	-	chr4.4:34796963-34796982	None:intergenic	45.0%
	GATCCCTAACTTCATGTGTC+AGG	+	chr4.4:34796957-34796976	MS.gene28963:CDS	45.0%
	GGTGATTTCACCAACGGAAA+CGG	+	chr4.4:34796982-34797001	MS.gene28963:CDS	45.0%
	GTGAAGGAGATCGAGAAAGT+CGG	+	chr4.4:34797204-34797223	MS.gene28963:CDS	45.0%
	TGAAGGTCTGGAAGTTGTGA+AGG	+	chr4.4:34797188-34797207	MS.gene28963:CDS	45.0%
!	GGAAGGAAGATCCTTTGAAG+TGG	-	chr4.4:34796930-34796949	None:intergenic	45.0%
!	GTATTCGGTCAGGTTGTTGA+AGG	+	chr4.4:34797171-34797190	MS.gene28963:CDS	45.0%
!	GTTTTCTTCGACATGACCGT+CGG	+	chr4.4:34796784-34796803	MS.gene28963:CDS	45.0%
!!	GAAGATCCTTTGAAGTGGAG+TGG	-	chr4.4:34796925-34796944	None:intergenic	45.0%
	AAAGCACGTCGTATTCGGTC+AGG	+	chr4.4:34797161-34797180	MS.gene28963:CDS	50.0%
	AATTTCCGTGCTCTCTGCAC+CGG	+	chr4.4:34796871-34796890	MS.gene28963:CDS	50.0%
	CAGGGAGGTGATTTCACCAA+CGG	+	chr4.4:34796976-34796995	MS.gene28963:CDS	50.0%
	CCTAACTTCATGTGTCAGGG+AGG	+	chr4.4:34796961-34796980	MS.gene28963:CDS	50.0%
	CCTCCCTGACACATGAAGTT+AGG	-	chr4.4:34796964-34796983	None:intergenic	50.0%
	GACGAAGAACTGAGATCCGT+TGG	-	chr4.4:34797112-34797131	None:intergenic	50.0%
	GAGAAAGTCGGATCTGGATC+TGG	+	chr4.4:34797216-34797235	MS.gene28963:CDS	50.0%
	GAGATCGAGAAAGTCGGATC+TGG	+	chr4.4:34797210-34797229	MS.gene28963:CDS	50.0%
	GGCAAACCACTCCACTTCAA+AGG	+	chr4.4:34796916-34796935	MS.gene28963:CDS	50.0%
	TGAAGTTAGGGATCACACGG+TGG	-	chr4.4:34796951-34796970	None:intergenic	50.0%
	TTCACCAACGGAAACGGTAC+CGG	+	chr4.4:34796988-34797007	MS.gene28963:CDS	50.0%
!	GACGGAAAGCACGTCGTATT+CGG	+	chr4.4:34797156-34797175	MS.gene28963:CDS	50.0%
!	GCAGAGAGCACGGAAATTCT+CGG	-	chr4.4:34796869-34796888	None:intergenic	50.0%
!!	AACTGAGATCCGTTGGTTCC+TGG	-	chr4.4:34797105-34797124	None:intergenic	50.0%
	AACGCTGGTCCAGGAACCAA+CGG	+	chr4.4:34797093-34797112	MS.gene28963:CDS	55.0%
	ACCGGAGGCGAATCGATCTA+CGG	+	chr4.4:34797006-34797025	MS.gene28963:CDS	55.0%
	CATGGAGAGGATTCCAGGAC+CGG	-	chr4.4:34797070-34797089	None:intergenic	55.0%
	CGAAGATGATACGTCCGGCA+GGG	-	chr4.4:34796816-34796835	None:intergenic	55.0%
	GCTAAGACAGAGTGGCTCGA+CGG	+	chr4.4:34797138-34797157	MS.gene28963:CDS	55.0%
	GTCGAGCCACTCTGTCTTAG+CGG	-	chr4.4:34797139-34797158	None:intergenic	55.0%
	GTTAGGGATCACACGGTGGA+AGG	-	chr4.4:34796947-34796966	None:intergenic	55.0%
	TCGAAGATGATACGTCCGGC+AGG	-	chr4.4:34796817-34796836	None:intergenic	55.0%
	TCTGCACCGCTAAGACAGAG+TGG	+	chr4.4:34797130-34797149	MS.gene28963:CDS	55.0%
	TTCGCCATGGAGAGGATTCC+AGG	-	chr4.4:34797075-34797094	None:intergenic	55.0%
	TTCTTCGACATGACCGTCGG+TGG	+	chr4.4:34796787-34796806	MS.gene28963:CDS	55.0%
!	ATCAAGAAGCACACCGGTCC+TGG	+	chr4.4:34797054-34797073	MS.gene28963:CDS	55.0%
!	CGGTCAGGTTGTTGAAGGTC+TGG	+	chr4.4:34797176-34797195	MS.gene28963:CDS	55.0%
!	GAGAGCACGGAAATTCTCGG+CGG	-	chr4.4:34796866-34796885	None:intergenic	55.0%
!!	TCCGTAGATCGATTCGCCTC+CGG	-	chr4.4:34797010-34797029	None:intergenic	55.0%
	ACGGAAATTCTCGGCGGTGC+GGG	-	chr4.4:34796860-34796879	None:intergenic	60.0%
	ATCCTCTCCATGGCGAACGC+TGG	+	chr4.4:34797078-34797097	MS.gene28963:CDS	60.0%
	CACGGAAATTCTCGGCGGTG+CGG	-	chr4.4:34796861-34796880	None:intergenic	60.0%
	CGGTCCTGGAATCCTCTCCA+TGG	+	chr4.4:34797068-34797087	MS.gene28963:CDS	60.0%
!	ACCAACGGAAACGGTACCGG+AGG	+	chr4.4:34796991-34797010	MS.gene28963:CDS	60.0%
!	AGTGGAGTGGTTTGCCGCTG+CGG	-	chr4.4:34796912-34796931	None:intergenic	60.0%
!	CCAGTCGTGATCGCCGATTG+CGG	+	chr4.4:34797252-34797271	MS.gene28963:CDS	60.0%
!	TGCACCGGCGAGAAAGGAGT+CGG	+	chr4.4:34796886-34796905	MS.gene28963:CDS	60.0%
	CCGCAATCGGCGATCACGAC+TGG	-	chr4.4:34797255-34797274	None:intergenic	65.0%
	CGGAAATTCTCGGCGGTGCG+GGG	-	chr4.4:34796859-34796878	None:intergenic	65.0%
	GACCAGCGTTCGCCATGGAG+AGG	-	chr4.4:34797083-34797102	None:intergenic	65.0%
	GAGAAAGGAGTCGGCCGCAG+CGG	+	chr4.4:34796895-34796914	MS.gene28963:CDS	65.0%
	GCCTCCGGTACCGTTTCCGT+TGG	-	chr4.4:34796995-34797014	None:intergenic	65.0%
	TCCATGGCGAACGCTGGTCC+AGG	+	chr4.4:34797084-34797103	MS.gene28963:CDS	65.0%
	TCCTGGACCAGCGTTCGCCA+TGG	-	chr4.4:34797088-34797107	None:intergenic	65.0%
	TCTCGCCGGTGCAGAGAGCA+CGG	-	chr4.4:34796879-34796898	None:intergenic	65.0%
!	GCTCTCTGCACCGGCGAGAA+AGG	+	chr4.4:34796880-34796899	MS.gene28963:CDS	65.0%
!!	GGCGATCACGACTGGCTTCG+AGG	-	chr4.4:34797247-34797266	None:intergenic	65.0%
	ACCGTCGGTGGCAACCCTGC+CGG	+	chr4.4:34796799-34796818	MS.gene28963:CDS	70.0%
	GGCGGTGCGGGGAGTGACAT+CGG	-	chr4.4:34796848-34796867	None:intergenic	70.0%
	TCCGGCAGGGTTGCCACCGA+CGG	-	chr4.4:34796803-34796822	None:intergenic	70.0%
!	GCGGCCGACTCCTTTCTCGC+CGG	-	chr4.4:34796893-34796912	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	34796769	34797287	34796769	ID=MS.gene28963
chr4.4	mRNA	34796769	34797287	34796769	ID=MS.gene28963.t1;Parent=MS.gene28963
chr4.4	exon	34796769	34797287	34796769	ID=MS.gene28963.t1.exon1;Parent=MS.gene28963.t1
chr4.4	CDS	34796769	34797287	34796769	ID=cds.MS.gene28963.t1;Parent=MS.gene28963.t1

Gene Sequence

>MS.gene28963

ATGTCTAACCCTAAGGTTTTCTTCGACATGACCGTCGGTGGCAACCCTGCCGGACGTATCATCTTCGAGCTTTTCGCCGATGTCACTCCCCGCACCGCCGAGAATTTCCGTGCTCTCTGCACCGGCGAGAAAGGAGTCGGCCGCAGCGGCAAACCACTCCACTTCAAAGGATCTTCCTTCCACCGTGTGATCCCTAACTTCATGTGTCAGGGAGGTGATTTCACCAACGGAAACGGTACCGGAGGCGAATCGATCTACGGATCAAAGTTCGCTGATGAGAATTTCATCAAGAAGCACACCGGTCCTGGAATCCTCTCCATGGCGAACGCTGGTCCAGGAACCAACGGATCTCAGTTCTTCGTCTGCACCGCTAAGACAGAGTGGCTCGACGGAAAGCACGTCGTATTCGGTCAGGTTGTTGAAGGTCTGGAAGTTGTGAAGGAGATCGAGAAAGTCGGATCTGGATCTGGAAAGACCTCGAAGCCAGTCGTGATCGCCGATTGCGGTCAACTCTCTTAG

Protein sequence

>MS.gene28963.t1

MSNPKVFFDMTVGGNPAGRIIFELFADVTPRTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTNGNGTGGESIYGSKFADENFIKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGLEVVKEIEKVGSGSGKTSKPVVIADCGQLS