AlfalfaGEDB | MS.gene063104

M. sativa cultivar XinJiangDaYe / MS.gene063104

KEGG: K01802
GO: GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564
PFAM: PF00160.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063104.t1	XP_003604030.1	93.7	191	9	2	1	188	1	191	3.50E-96	360.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063104.t1	Q8W171	85.4	171	25	0	8	178	2	172	4.9e-86	318.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063104.t1	G7J8H2	93.7	191	9	2	1	188	1	191	2.6e-96	360.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049232	MS.gene063104	0.80291	4.48E-49	-1.69E-46
MS.gene050504	MS.gene063104	0.805408	1.35E-49	-1.69E-46
MS.gene050518	MS.gene063104	0.82485	6.46E-54	-1.69E-46
MS.gene050612	MS.gene063104	0.804991	1.66E-49	-1.69E-46
MS.gene050876	MS.gene063104	0.816608	5.07E-52	-1.69E-46
MS.gene050986	MS.gene063104	0.818963	1.49E-52	-1.69E-46
MS.gene055634	MS.gene063104	0.833375	5.53E-56	-1.69E-46
MS.gene055776	MS.gene063104	0.837605	4.71E-57	-1.69E-46
MS.gene055849	MS.gene063104	0.813563	2.40E-51	-1.69E-46
MS.gene056510	MS.gene063104	0.8115	6.79E-51	-1.69E-46
MS.gene057765	MS.gene063104	0.804667	1.94E-49	-1.69E-46
MS.gene057872	MS.gene063104	0.806106	9.66E-50	-1.69E-46
MS.gene058719	MS.gene063104	0.821616	3.67E-53	-1.69E-46
MS.gene059865	MS.gene063104	0.800329	1.52E-48	-1.69E-46
MS.gene060703	MS.gene063104	0.80686	6.70E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene063104	MS.gene051153	PPI
MS.gene23663	MS.gene063104	PPI
MS.gene063104	MS.gene003412	PPI
MS.gene063104	MS.gene048458	PPI
MS.gene063104	MS.gene050281	PPI
MS.gene063104	MS.gene04515	PPI
MS.gene063104	MS.gene074045	PPI
MS.gene050574	MS.gene063104	PPI
MS.gene39668	MS.gene063104	PPI
MS.gene61767	MS.gene063104	PPI
MS.gene063104	MS.gene04526	PPI
MS.gene28963	MS.gene063104	PPI
MS.gene68752	MS.gene063104	PPI
MS.gene88451	MS.gene063104	PPI
MS.gene063104	MS.gene019366	PPI
MS.gene83474	MS.gene063104	PPI
MS.gene050281	MS.gene063104	PPI
MS.gene22872	MS.gene063104	PPI
MS.gene063104	MS.gene28963	PPI
MS.gene063104	MS.gene47195	PPI
MS.gene82121	MS.gene063104	PPI
MS.gene063104	MS.gene23546	PPI
MS.gene063104	MS.gene024514	PPI
MS.gene28703	MS.gene063104	PPI
MS.gene063104	MS.gene72809	PPI
MS.gene063787	MS.gene063104	PPI
MS.gene025980	MS.gene063104	PPI
MS.gene68153	MS.gene063104	PPI
MS.gene063104	MS.gene55545	PPI
MS.gene063104	MS.gene007179	PPI
MS.gene052269	MS.gene063104	PPI
MS.gene063104	MS.gene028111	PPI
MS.gene063104	MS.gene014216	PPI
MS.gene063104	MS.gene052266	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063104.t1	MTR_3g117750	97.861	187	3	1	3	188	5	191	2.08e-133	371
MS.gene063104.t1	MTR_4g075290	86.471	170	23	0	9	178	3	172	1.12e-109	310
MS.gene063104.t1	MTR_7g116340	76.471	170	40	0	9	178	3	172	4.75e-97	278
MS.gene063104.t1	MTR_3g463900	67.665	167	54	0	11	177	35	201	1.79e-79	235
MS.gene063104.t1	MTR_3g070500	62.921	178	66	0	1	178	55	232	4.38e-79	235
MS.gene063104.t1	MTR_7g095750	63.743	171	61	1	9	178	6	176	9.26e-75	236
MS.gene063104.t1	MTR_8g079690	58.757	177	71	2	8	182	2	178	8.20e-68	211
MS.gene063104.t1	MTR_1g117010	60.819	171	56	3	11	177	78	241	2.39e-67	206
MS.gene063104.t1	MTR_1g117010	60.819	171	56	3	11	177	78	241	2.39e-67	206
MS.gene063104.t1	MTR_8g040180	58.857	175	67	4	6	177	13	185	2.18e-66	201
MS.gene063104.t1	MTR_1g085560	66.438	146	42	1	11	156	86	224	3.76e-66	203
MS.gene063104.t1	MTR_7g110980	58.523	176	55	3	11	180	97	260	7.89e-66	202
MS.gene063104.t1	MTR_4g086760	57.386	176	69	3	11	182	5	178	9.47e-64	199
MS.gene063104.t1	MTR_4g086760	57.386	176	69	3	11	182	5	178	1.79e-63	200
MS.gene063104.t1	MTR_4g086760	57.386	176	69	3	11	182	5	178	1.85e-63	199
MS.gene063104.t1	MTR_3g070500	65.672	134	46	0	1	134	55	188	6.69e-61	187
MS.gene063104.t1	MTR_4g073650	53.757	173	79	1	6	177	42	214	1.46e-60	188
MS.gene063104.t1	MTR_3g107660	51.445	173	83	1	9	180	9	181	7.78e-52	178
MS.gene063104.t1	MTR_3g070500	64.220	109	39	0	1	109	55	163	4.24e-46	149
MS.gene063104.t1	MTR_3g070500	63.889	108	39	0	1	108	55	162	7.85e-46	149
MS.gene063104.t1	MTR_1g011980	48.555	173	87	2	9	180	6	177	2.96e-44	156
MS.gene063104.t1	MTR_2g085075	52.027	148	55	5	23	168	470	603	2.81e-35	130
MS.gene063104.t1	MTR_7g105220	50.360	139	53	4	23	158	18	143	5.32e-35	121
MS.gene063104.t1	MTR_8g036015	48.611	144	58	5	23	163	9	139	4.11e-33	116
MS.gene063104.t1	MTR_3g085705	50.877	114	51	3	43	156	7	115	1.79e-29	105
MS.gene063104.t1	MTR_5g015500	48.529	136	58	4	24	158	314	438	1.94e-28	110
MS.gene063104.t1	MTR_5g015500	48.529	136	58	4	24	158	354	478	3.31e-28	110
MS.gene063104.t1	MTR_6g084140	38.824	170	83	6	23	182	9	167	1.13e-22	94.7
MS.gene063104.t1	MTR_6g084140	38.824	170	83	6	23	182	26	184	1.19e-22	94.7
MS.gene063104.t1	MTR_8g442420	38.235	170	84	6	23	182	9	167	1.36e-21	91.7
MS.gene063104.t1	MTR_2g023120	42.742	124	58	5	24	145	22	134	9.12e-18	80.5
MS.gene063104.t1	MTR_1g094065	35.897	156	66	7	24	170	89	219	3.17e-14	68.6
MS.gene063104.t1	MTR_1g035360	29.299	157	93	5	24	177	88	229	1.95e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063104.t1	AT2G16600	83.529	170	28	0	9	178	4	173	6.22e-106	301
MS.gene063104.t1	AT4G38740	80.473	169	33	0	10	178	4	172	2.44e-101	290
MS.gene063104.t1	AT2G21130	78.824	170	36	0	9	178	4	173	2.06e-100	287
MS.gene063104.t1	AT4G34870	79.412	170	35	0	9	178	3	172	1.52e-99	285
MS.gene063104.t1	AT3G56070	72.515	171	47	0	9	179	3	173	1.45e-90	262
MS.gene063104.t1	AT3G56070	72.515	171	47	0	9	179	3	173	1.45e-90	262
MS.gene063104.t1	AT2G16600	71.765	170	26	1	9	178	4	151	7.67e-84	244
MS.gene063104.t1	AT2G29960	67.066	167	55	0	11	177	33	199	1.58e-78	233
MS.gene063104.t1	AT2G29960	67.066	167	55	0	11	177	33	199	1.58e-78	233
MS.gene063104.t1	AT3G63400	66.667	171	56	1	9	178	6	176	8.82e-77	235
MS.gene063104.t1	AT5G58710	65.868	167	57	0	11	177	36	202	1.56e-76	228
MS.gene063104.t1	AT3G63400	66.667	171	56	1	9	178	6	176	4.76e-75	235
MS.gene063104.t1	AT3G63400	66.667	171	56	1	9	178	6	176	4.76e-75	235
MS.gene063104.t1	AT3G63400	66.667	171	56	1	9	178	6	176	4.76e-75	235
MS.gene063104.t1	AT5G13120	62.983	181	56	3	1	177	77	250	2.60e-74	224
MS.gene063104.t1	AT5G13120	62.983	181	56	3	1	177	81	254	4.62e-74	224
MS.gene063104.t1	AT3G55920	61.905	168	64	0	11	178	60	227	3.25e-73	220
MS.gene063104.t1	AT2G29960	62.275	167	53	1	11	177	33	189	2.07e-69	209
MS.gene063104.t1	AT3G62030	58.989	178	65	2	4	180	88	258	8.05e-69	210
MS.gene063104.t1	AT3G62030	58.989	178	65	2	4	180	89	259	8.96e-69	210
MS.gene063104.t1	AT3G62030	58.989	178	65	2	4	180	142	312	3.61e-68	210
MS.gene063104.t1	AT2G15790	60.920	174	66	2	11	182	5	178	5.58e-65	204
MS.gene063104.t1	AT2G38730	58.857	175	67	4	6	177	27	199	6.91e-65	198
MS.gene063104.t1	AT4G34960	54.070	172	78	1	11	181	48	219	2.00e-60	188
MS.gene063104.t1	AT3G22920	53.143	175	70	5	9	179	3	169	5.91e-54	171
MS.gene063104.t1	AT4G34960	55.645	124	55	0	11	134	48	171	8.60e-46	149
MS.gene063104.t1	AT4G32420	47.929	169	87	1	9	176	6	174	9.86e-46	160
MS.gene063104.t1	AT4G32420	47.929	169	87	1	9	176	6	174	9.86e-46	160
MS.gene063104.t1	AT4G32420	47.929	169	87	1	9	176	6	174	9.86e-46	160
MS.gene063104.t1	AT4G32420	47.929	169	87	1	9	176	6	174	9.86e-46	160
MS.gene063104.t1	AT4G32420	48.408	157	80	1	9	164	6	162	2.30e-42	151
MS.gene063104.t1	AT2G36130	48.649	148	62	5	23	169	18	152	1.76e-36	125
MS.gene063104.t1	AT3G44600	51.429	140	54	4	23	160	484	611	6.44e-34	126
MS.gene063104.t1	AT1G01940	48.252	143	60	5	23	163	9	139	7.07e-33	115
MS.gene063104.t1	AT5G67530	45.806	155	65	6	7	158	339	477	7.00e-28	109
MS.gene063104.t1	AT4G33060	45.600	125	55	5	24	146	22	135	1.18e-24	100
MS.gene063104.t1	AT1G53720	38.028	142	68	5	23	155	9	139	1.26e-20	87.8
MS.gene063104.t1	AT1G53720	38.028	142	68	5	23	155	9	139	2.14e-20	88.2

Find 83 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAATTCTCGTCGGCGAATT+TGG	0.117790	3.3:-95661085	None:intergenic
TGGGATTGGGGTTGGGGATG+GGG	0.189257	3.3:-95660813	None:intergenic
TTGGGATTGGGGTTGGGGAT+GGG	0.254630	3.3:-95660814	None:intergenic
AGACTTTGGGATTGGGGTTG+GGG	0.279401	3.3:-95660819	None:intergenic
AAGACTTTGGGATTGGGGTT+GGG	0.281079	3.3:-95660820	None:intergenic
GAGAAAGTTGGGTCCGGTTC+GGG	0.294795	3.3:+95661270	MS.gene063104:CDS
TTTGGGATTGGGGTTGGGGA+TGG	0.340234	3.3:-95660815	None:intergenic
CTCTCCACCGGTACCATTAC+CGG	0.380312	3.3:-95661049	None:intergenic
GGCGAATTTGGACCCGTAGA+TGG	0.381308	3.3:-95661073	None:intergenic
TCGAAGAAGACTTTGGGATT+GGG	0.389727	3.3:-95660826	None:intergenic
GAAGACTTTGGGATTGGGGT+TGG	0.396057	3.3:-95660821	None:intergenic
TGAGAAAGTTGGGTCCGGTT+CGG	0.405741	3.3:+95661269	MS.gene063104:CDS
GTGAAAGAGATTGAGAAAGT+TGG	0.416986	3.3:+95661258	MS.gene063104:CDS
ATGGTAGCTATATATGTTGT+TGG	0.423422	3.3:-95661356	None:intergenic
GTCGAAGAAGACTTTGGGAT+TGG	0.424528	3.3:-95660827	None:intergenic
GTCATGTCGAAGAAGACTTT+GGG	0.428350	3.3:-95660832	None:intergenic
GCAGAGTGCACGGAAGTTAT+CGG	0.432521	3.3:-95660920	None:intergenic
TGGTGAGGTGGTTGAAGGAA+TGG	0.433417	3.3:+95661230	MS.gene063104:CDS
GCGAAGACGGAGTGGCTTGA+TGG	0.435031	3.3:+95661192	MS.gene063104:CDS
CGAAGAAGACTTTGGGATTG+GGG	0.456798	3.3:-95660825	None:intergenic
CCTCCTTGACACATGAAATC+AGG	0.460761	3.3:-95661015	None:intergenic
GGTCATGTCGAAGAAGACTT+TGG	0.463837	3.3:-95660833	None:intergenic
GCACTCTGCACCGGGGAGAA+AGG	0.471854	3.3:+95660934	MS.gene063104:CDS
ACCGGTGGAGAGTCCATCTA+CGG	0.473790	3.3:+95661060	MS.gene063104:CDS
AACTTCCGTGCACTCTGCAC+CGG	0.478449	3.3:+95660925	MS.gene063104:CDS
AGGTCCAGGTGTTCTTTCAA+TGG	0.486279	3.3:+95661122	MS.gene063104:CDS
CTTCATATGCACGGCGAAGA+CGG	0.491522	3.3:+95661179	MS.gene063104:CDS
TGAAAGAGATTGAGAAAGTT+GGG	0.494450	3.3:+95661259	MS.gene063104:CDS
GTTCTTTCAATGGCGAATGC+GGG	0.507071	3.3:+95661132	MS.gene063104:CDS
CGAAGACGGAGTGGCTTGAT+GGG	0.510239	3.3:+95661193	MS.gene063104:CDS
GGTGACTTCACCGCCGGTAA+TGG	0.512626	3.3:+95661036	MS.gene063104:CDS
GATCATTATCATCAGAGAGT+TGG	0.513860	3.3:-95661329	None:intergenic
ATCAAGACCCACACAGGTCC+AGG	0.524358	3.3:+95661108	MS.gene063104:CDS
CATGACCGTCGGAGACGAAC+CGG	0.524784	3.3:+95660849	MS.gene063104:CDS
ACTTCCGTGCACTCTGCACC+GGG	0.526298	3.3:+95660926	MS.gene063104:CDS
GGAAGATAGAGCCTTTGTAA+TGG	0.527764	3.3:-95660981	None:intergenic
GAGATTGAGAAAGTTGGGTC+CGG	0.536951	3.3:+95661264	MS.gene063104:CDS
TTCGCCATTGAAAGAACACC+TGG	0.544494	3.3:-95661126	None:intergenic
TCTCCCCGGTGCAGAGTGCA+CGG	0.546941	3.3:-95660930	None:intergenic
GAACTGTGATCCATTCGTAC+CGG	0.549331	3.3:-95661157	None:intergenic
AACTGTGATCCATTCGTACC+GGG	0.549830	3.3:-95661156	None:intergenic
AATGCGGGACCCGGTACGAA+TGG	0.554826	3.3:+95661147	MS.gene063104:CDS
TGTTCTTTCAATGGCGAATG+CGG	0.558234	3.3:+95661131	MS.gene063104:CDS
TTCACCGCCGGTAATGGTAC+CGG	0.561434	3.3:+95661042	MS.gene063104:CDS
GTCTTCTTCGACATGACCGT+CGG	0.574777	3.3:+95660838	MS.gene063104:CDS
GGCGGTGAGAGGAGTGGTGT+CGG	0.577204	3.3:-95660899	None:intergenic
TCAATGGCGAATGCGGGACC+CGG	0.581965	3.3:+95661138	MS.gene063104:CDS
TCCGACCGGTTCGTCTCCGA+CGG	0.586188	3.3:-95660854	None:intergenic
GGTGGTTGAAGGAATGGAGG+TGG	0.586389	3.3:+95661236	MS.gene063104:CDS
CCGCAGTCAGCAATAACCAC+CGG	0.587692	3.3:-95661306	None:intergenic
TTCGGGGAAAACATCAAAGC+CGG	0.592489	3.3:+95661287	MS.gene063104:CDS
ACCGGTCGGACGTATCGTCA+TGG	0.600041	3.3:+95660867	MS.gene063104:CDS
CGGAAGTTATCGGCGGTGAG+AGG	0.605286	3.3:-95660910	None:intergenic
AGAAAGTTGGGTCCGGTTCG+GGG	0.607170	3.3:+95661271	MS.gene063104:CDS
ATAGAGCCTTTGTAATGGAG+AGG	0.607462	3.3:-95660976	None:intergenic
CCCGTAGATGGACTCTCCAC+CGG	0.607666	3.3:-95661061	None:intergenic
GCTACCGAGTCCTTTCTCCC+CGG	0.607787	3.3:-95660944	None:intergenic
ATACCTGATTTCATGTGTCA+AGG	0.608102	3.3:+95661012	MS.gene063104:CDS
ATCACAGTTCTTCATATGCA+CGG	0.610600	3.3:+95661170	MS.gene063104:CDS
TGAGGTGGTTGAAGGAATGG+AGG	0.611761	3.3:+95661233	MS.gene063104:CDS
GAGAAAGGACTCGGTAGCAG+TGG	0.612151	3.3:+95660949	MS.gene063104:CDS
CAAGGAGGTGACTTCACCGC+CGG	0.614495	3.3:+95661030	MS.gene063104:CDS
ACCGCCGGTAATGGTACCGG+TGG	0.624217	3.3:+95661045	MS.gene063104:CDS
CCGGTGGAGAGTCCATCTAC+GGG	0.638547	3.3:+95661061	MS.gene063104:CDS
AAGAACACCTGGACCTGTGT+GGG	0.644240	3.3:-95661115	None:intergenic
TCCATGACGATACGTCCGAC+CGG	0.645610	3.3:-95660868	None:intergenic
AATTTCATCAAGACCCACAC+AGG	0.645692	3.3:+95661102	MS.gene063104:CDS
GGCAAGCCTCTCCATTACAA+AGG	0.646729	3.3:+95660970	MS.gene063104:CDS
TGCACCGGGGAGAAAGGACT+CGG	0.648211	3.3:+95660940	MS.gene063104:CDS
GGTCTTGATGAAATTCTCGT+CGG	0.653249	3.3:-95661094	None:intergenic
CCTGATTTCATGTGTCAAGG+AGG	0.663642	3.3:+95661015	MS.gene063104:CDS
GTTATCGGCGGTGAGAGGAG+TGG	0.666243	3.3:-95660905	None:intergenic
TATGCACGGCGAAGACGGAG+TGG	0.669618	3.3:+95661184	MS.gene063104:CDS
TGAAATCAGGTATGACGCGG+TGG	0.671849	3.3:-95661002	None:intergenic
GGGGAAAACATCAAAGCCGG+TGG	0.686265	3.3:+95661290	MS.gene063104:CDS
CCGGTGGTTATTGCTGACTG+CGG	0.692364	3.3:+95661306	MS.gene063104:CDS
GTGGCTTGATGGGAAACATG+TGG	0.698636	3.3:+95661203	MS.gene063104:CDS
ACCGTCGGAGACGAACCGGT+CGG	0.705667	3.3:+95660853	MS.gene063104:CDS
TCCACCGGTACCATTACCGG+CGG	0.707753	3.3:-95661046	None:intergenic
AAAGAACACCTGGACCTGTG+TGG	0.718700	3.3:-95661116	None:intergenic
ACATGAAATCAGGTATGACG+CGG	0.735409	3.3:-95661005	None:intergenic
GAGTGCACGGAAGTTATCGG+CGG	0.736092	3.3:-95660917	None:intergenic
CTTCCGTGCACTCTGCACCG+GGG	0.766706	3.3:+95660927	MS.gene063104:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	TGAAAGAGATTGAGAAAGTT+GGG	+	chr3.3:95661259-95661278	MS.gene063104:CDS	30.0%
	ATACCTGATTTCATGTGTCA+AGG	+	chr3.3:95661012-95661031	MS.gene063104:CDS	35.0%
	ATCACAGTTCTTCATATGCA+CGG	+	chr3.3:95661170-95661189	MS.gene063104:CDS	35.0%
	GATCATTATCATCAGAGAGT+TGG	-	chr3.3:95661332-95661351	None:intergenic	35.0%
	GTGAAAGAGATTGAGAAAGT+TGG	+	chr3.3:95661258-95661277	MS.gene063104:CDS	35.0%
	AATTTCATCAAGACCCACAC+AGG	+	chr3.3:95661102-95661121	MS.gene063104:CDS	40.0%
	ACATGAAATCAGGTATGACG+CGG	-	chr3.3:95661008-95661027	None:intergenic	40.0%
	GGAAGATAGAGCCTTTGTAA+TGG	-	chr3.3:95660984-95661003	None:intergenic	40.0%
	GGTCTTGATGAAATTCTCGT+CGG	-	chr3.3:95661097-95661116	None:intergenic	40.0%
	GTCATGTCGAAGAAGACTTT+GGG	-	chr3.3:95660835-95660854	None:intergenic	40.0%
	TGTTCTTTCAATGGCGAATG+CGG	+	chr3.3:95661131-95661150	MS.gene063104:CDS	40.0%
!	ATAGAGCCTTTGTAATGGAG+AGG	-	chr3.3:95660979-95660998	None:intergenic	40.0%
!	GATGGGAAACATGTGGTTTT+TGG	+	chr3.3:95661210-95661229	MS.gene063104:CDS	40.0%
!!	TCGAAGAAGACTTTGGGATT+GGG	-	chr3.3:95660829-95660848	None:intergenic	40.0%
!!!	GAAACATGTGGTTTTTGGTG+AGG	+	chr3.3:95661215-95661234	MS.gene063104:CDS	40.0%
	AACTGTGATCCATTCGTACC+GGG	-	chr3.3:95661159-95661178	None:intergenic	45.0%
	AGGTCCAGGTGTTCTTTCAA+TGG	+	chr3.3:95661122-95661141	MS.gene063104:CDS	45.0%
	CCTCCTTGACACATGAAATC+AGG	-	chr3.3:95661018-95661037	None:intergenic	45.0%
	CCTGATTTCATGTGTCAAGG+AGG	+	chr3.3:95661015-95661034	MS.gene063104:CDS	45.0%
	GAAATTCTCGTCGGCGAATT+TGG	-	chr3.3:95661088-95661107	None:intergenic	45.0%
	GAACTGTGATCCATTCGTAC+CGG	-	chr3.3:95661160-95661179	None:intergenic	45.0%
	GAGATTGAGAAAGTTGGGTC+CGG	+	chr3.3:95661264-95661283	MS.gene063104:CDS	45.0%
	GGTCATGTCGAAGAAGACTT+TGG	-	chr3.3:95660836-95660855	None:intergenic	45.0%
	GTTCTTTCAATGGCGAATGC+GGG	+	chr3.3:95661132-95661151	MS.gene063104:CDS	45.0%
	TTCGCCATTGAAAGAACACC+TGG	-	chr3.3:95661129-95661148	None:intergenic	45.0%
	TTCGGGGAAAACATCAAAGC+CGG	+	chr3.3:95661287-95661306	MS.gene063104:CDS	45.0%
!	CTTTGATGTTTTCCCCGAAC+CGG	-	chr3.3:95661286-95661305	None:intergenic	45.0%
!!	AAGACTTTGGGATTGGGGTT+GGG	-	chr3.3:95660823-95660842	None:intergenic	45.0%
!!	CGAAGAAGACTTTGGGATTG+GGG	-	chr3.3:95660828-95660847	None:intergenic	45.0%
!!	GTCGAAGAAGACTTTGGGAT+TGG	-	chr3.3:95660830-95660849	None:intergenic	45.0%
!!!	ACATGTGGTTTTTGGTGAGG+TGG	+	chr3.3:95661218-95661237	MS.gene063104:CDS	45.0%
!!!	GTTTTTGGTGAGGTGGTTGA+AGG	+	chr3.3:95661225-95661244	MS.gene063104:CDS	45.0%
	AAAGAACACCTGGACCTGTG+TGG	-	chr3.3:95661119-95661138	None:intergenic	50.0%
	AAGAACACCTGGACCTGTGT+GGG	-	chr3.3:95661118-95661137	None:intergenic	50.0%
	CTTCATATGCACGGCGAAGA+CGG	+	chr3.3:95661179-95661198	MS.gene063104:CDS	50.0%
	GCAGAGTGCACGGAAGTTAT+CGG	-	chr3.3:95660923-95660942	None:intergenic	50.0%
	GGCAAGCCTCTCCATTACAA+AGG	+	chr3.3:95660970-95660989	MS.gene063104:CDS	50.0%
	GTCTTCTTCGACATGACCGT+CGG	+	chr3.3:95660838-95660857	MS.gene063104:CDS	50.0%
	GTGGCTTGATGGGAAACATG+TGG	+	chr3.3:95661203-95661222	MS.gene063104:CDS	50.0%
	TGAAATCAGGTATGACGCGG+TGG	-	chr3.3:95661005-95661024	None:intergenic	50.0%
	TGAGAAAGTTGGGTCCGGTT+CGG	+	chr3.3:95661269-95661288	MS.gene063104:CDS	50.0%
	TGAGGTGGTTGAAGGAATGG+AGG	+	chr3.3:95661233-95661252	MS.gene063104:CDS	50.0%
	TGGTGAGGTGGTTGAAGGAA+TGG	+	chr3.3:95661230-95661249	MS.gene063104:CDS	50.0%
!!	AGACTTTGGGATTGGGGTTG+GGG	-	chr3.3:95660822-95660841	None:intergenic	50.0%
!!	GAAGACTTTGGGATTGGGGT+TGG	-	chr3.3:95660824-95660843	None:intergenic	50.0%
	AACTTCCGTGCACTCTGCAC+CGG	+	chr3.3:95660925-95660944	MS.gene063104:CDS	55.0%
	ACCGGTGGAGAGTCCATCTA+CGG	+	chr3.3:95661060-95661079	MS.gene063104:CDS	55.0%
	ATCAAGACCCACACAGGTCC+AGG	+	chr3.3:95661108-95661127	MS.gene063104:CDS	55.0%
	CCGCAGTCAGCAATAACCAC+CGG	-	chr3.3:95661309-95661328	None:intergenic	55.0%
	CGAAGACGGAGTGGCTTGAT+GGG	+	chr3.3:95661193-95661212	MS.gene063104:CDS	55.0%
	CTCTCCACCGGTACCATTAC+CGG	-	chr3.3:95661052-95661071	None:intergenic	55.0%
	GAGAAAGTTGGGTCCGGTTC+GGG	+	chr3.3:95661270-95661289	MS.gene063104:CDS	55.0%
	GAGTGCACGGAAGTTATCGG+CGG	-	chr3.3:95660920-95660939	None:intergenic	55.0%
	GGCGAATTTGGACCCGTAGA+TGG	-	chr3.3:95661076-95661095	None:intergenic	55.0%
	GGGGAAAACATCAAAGCCGG+TGG	+	chr3.3:95661290-95661309	MS.gene063104:CDS	55.0%
	GGTGGTTGAAGGAATGGAGG+TGG	+	chr3.3:95661236-95661255	MS.gene063104:CDS	55.0%
	TCCATGACGATACGTCCGAC+CGG	-	chr3.3:95660871-95660890	None:intergenic	55.0%
	TTGGGATTGGGGTTGGGGAT+GGG	-	chr3.3:95660817-95660836	None:intergenic	55.0%
!	AGAAAGTTGGGTCCGGTTCG+GGG	+	chr3.3:95661271-95661290	MS.gene063104:CDS	55.0%
!	CCGGTGGTTATTGCTGACTG+CGG	+	chr3.3:95661306-95661325	MS.gene063104:CDS	55.0%
!	GAGAAAGGACTCGGTAGCAG+TGG	+	chr3.3:95660949-95660968	MS.gene063104:CDS	55.0%
!	TTCACCGCCGGTAATGGTAC+CGG	+	chr3.3:95661042-95661061	MS.gene063104:CDS	55.0%
!	TTTGGGATTGGGGTTGGGGA+TGG	-	chr3.3:95660818-95660837	None:intergenic	55.0%
	AATGCGGGACCCGGTACGAA+TGG	+	chr3.3:95661147-95661166	MS.gene063104:CDS	60.0%
	ACCGGTCGGACGTATCGTCA+TGG	+	chr3.3:95660867-95660886	MS.gene063104:CDS	60.0%
	ACTTCCGTGCACTCTGCACC+GGG	+	chr3.3:95660926-95660945	MS.gene063104:CDS	60.0%
	CAAGGAGGTGACTTCACCGC+CGG	+	chr3.3:95661030-95661049	MS.gene063104:CDS	60.0%
	CATGACCGTCGGAGACGAAC+CGG	+	chr3.3:95660849-95660868	MS.gene063104:CDS	60.0%
	CCGGTGGAGAGTCCATCTAC+GGG	+	chr3.3:95661061-95661080	MS.gene063104:CDS	60.0%
	CGGAAGTTATCGGCGGTGAG+AGG	-	chr3.3:95660913-95660932	None:intergenic	60.0%
	GCGAAGACGGAGTGGCTTGA+TGG	+	chr3.3:95661192-95661211	MS.gene063104:CDS	60.0%
	GCTACCGAGTCCTTTCTCCC+CGG	-	chr3.3:95660947-95660966	None:intergenic	60.0%
	GGTGACTTCACCGCCGGTAA+TGG	+	chr3.3:95661036-95661055	MS.gene063104:CDS	60.0%
	GTTATCGGCGGTGAGAGGAG+TGG	-	chr3.3:95660908-95660927	None:intergenic	60.0%
	TATGCACGGCGAAGACGGAG+TGG	+	chr3.3:95661184-95661203	MS.gene063104:CDS	60.0%
	TCAATGGCGAATGCGGGACC+CGG	+	chr3.3:95661138-95661157	MS.gene063104:CDS	60.0%
	TCCACCGGTACCATTACCGG+CGG	-	chr3.3:95661049-95661068	None:intergenic	60.0%
	TGCACCGGGGAGAAAGGACT+CGG	+	chr3.3:95660940-95660959	MS.gene063104:CDS	60.0%
	TGGGATTGGGGTTGGGGATG+GGG	-	chr3.3:95660816-95660835	None:intergenic	60.0%
!	CCCGTAGATGGACTCTCCAC+CGG	-	chr3.3:95661064-95661083	None:intergenic	60.0%
	ACCGTCGGAGACGAACCGGT+CGG	+	chr3.3:95660853-95660872	MS.gene063104:CDS	65.0%
	CTTCCGTGCACTCTGCACCG+GGG	+	chr3.3:95660927-95660946	MS.gene063104:CDS	65.0%
	GCACTCTGCACCGGGGAGAA+AGG	+	chr3.3:95660934-95660953	MS.gene063104:CDS	65.0%
	GGCGGTGAGAGGAGTGGTGT+CGG	-	chr3.3:95660902-95660921	None:intergenic	65.0%
	TCTCCCCGGTGCAGAGTGCA+CGG	-	chr3.3:95660933-95660952	None:intergenic	65.0%
!	ACCGCCGGTAATGGTACCGG+TGG	+	chr3.3:95661045-95661064	MS.gene063104:CDS	65.0%
!!	TCCGACCGGTTCGTCTCCGA+CGG	-	chr3.3:95660857-95660876	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	95660805	95661371	95660805	ID=MS.gene063104
chr3.3	mRNA	95660805	95661371	95660805	ID=MS.gene063104.t1;Parent=MS.gene063104
chr3.3	exon	95660805	95661371	95660805	ID=MS.gene063104.t1.exon1;Parent=MS.gene063104.t1
chr3.3	CDS	95660805	95661371	95660805	ID=cds.MS.gene063104.t1;Parent=MS.gene063104.t1

Gene Sequence

>MS.gene063104

ATGTCTAACCCCATCCCCAACCCCAATCCCAAAGTCTTCTTCGACATGACCGTCGGAGACGAACCGGTCGGACGTATCGTCATGGAACTTTACGCCGACACCACTCCTCTCACCGCCGATAACTTCCGTGCACTCTGCACCGGGGAGAAAGGACTCGGTAGCAGTGGCAAGCCTCTCCATTACAAAGGCTCTATCTTCCACCGCGTCATACCTGATTTCATGTGTCAAGGAGGTGACTTCACCGCCGGTAATGGTACCGGTGGAGAGTCCATCTACGGGTCCAAATTCGCCGACGAGAATTTCATCAAGACCCACACAGGTCCAGGTGTTCTTTCAATGGCGAATGCGGGACCCGGTACGAATGGATCACAGTTCTTCATATGCACGGCGAAGACGGAGTGGCTTGATGGGAAACATGTGGTTTTTGGTGAGGTGGTTGAAGGAATGGAGGTGGTGAAAGAGATTGAGAAAGTTGGGTCCGGTTCGGGGAAAACATCAAAGCCGGTGGTTATTGCTGACTGCGGCCAACTCTCTGATGATAATGATCTTAACCAACAACATATATAG

Protein sequence

>MS.gene063104.t1

MSNPIPNPNPKVFFDMTVGDEPVGRIVMELYADTTPLTADNFRALCTGEKGLGSSGKPLHYKGSIFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFADENFIKTHTGPGVLSMANAGPGTNGSQFFICTAKTEWLDGKHVVFGEVVEGMEVVKEIEKVGSGSGKTSKPVVIADCGQLSDDNDLNQQHI