AlfalfaGEDB | MS.gene052266

M. sativa cultivar XinJiangDaYe / MS.gene052266

KEGG: K01802
GO: GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564
PFAM: PF00160.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene052266.t1	XP_003607272.1	95.9	172	7	0	1	172	1	172	5.70E-93	350.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene052266.t1	Q8W171	88.4	172	20	0	1	172	1	172	4.3e-89	328.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene052266.t1	G7JPK2	95.9	172	7	0	1	172	1	172	4.1e-93	350.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene052266	MS.gene052269	0.995942	1.35E-221	-1.69E-46
MS.gene052266	MS.gene28703	0.997981	2.19E-253	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene063787	MS.gene052266	PPI
MS.gene68153	MS.gene052266	PPI
MS.gene052266	MS.gene007179	PPI
MS.gene052266	MS.gene23546	PPI
MS.gene052266	MS.gene024514	PPI
MS.gene014216	MS.gene052266	PPI
MS.gene052269	MS.gene052266	PPI
MS.gene048458	MS.gene052266	PPI
MS.gene23663	MS.gene052266	PPI
MS.gene051153	MS.gene052266	PPI
MS.gene47195	MS.gene052266	PPI
MS.gene052266	MS.gene04515	PPI
MS.gene052266	MS.gene074045	PPI
MS.gene55545	MS.gene052266	PPI
MS.gene28963	MS.gene052266	PPI
MS.gene019366	MS.gene052266	PPI
MS.gene052266	MS.gene04526	PPI
MS.gene050574	MS.gene052266	PPI
MS.gene39668	MS.gene052266	PPI
MS.gene003412	MS.gene052266	PPI
MS.gene61767	MS.gene052266	PPI
MS.gene68752	MS.gene052266	PPI
MS.gene88451	MS.gene052266	PPI
MS.gene28703	MS.gene052266	PPI
MS.gene83474	MS.gene052266	PPI
MS.gene050281	MS.gene052266	PPI
MS.gene22872	MS.gene052266	PPI
MS.gene025980	MS.gene052266	PPI
MS.gene82121	MS.gene052266	PPI
MS.gene052266	MS.gene72809	PPI
MS.gene028111	MS.gene052266	PPI
MS.gene063104	MS.gene052266	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene052266.t1	MTR_4g075290	95.930	172	7	0	1	172	1	172	9.03e-122	340
MS.gene052266.t1	MTR_3g117750	88.095	168	20	0	5	172	13	180	2.10e-110	312
MS.gene052266.t1	MTR_7g116340	77.326	172	39	0	1	172	1	172	2.65e-100	286
MS.gene052266.t1	MTR_3g463900	68.263	167	53	0	5	171	35	201	1.74e-83	245
MS.gene052266.t1	MTR_3g070500	65.476	168	58	0	5	172	65	232	2.70e-80	238
MS.gene052266.t1	MTR_7g095750	64.327	171	60	1	3	172	6	176	5.90e-78	244
MS.gene052266.t1	MTR_8g079690	60.571	175	65	3	1	172	1	174	7.82e-70	215
MS.gene052266.t1	MTR_1g085560	65.753	146	43	1	5	150	86	224	4.32e-68	207
MS.gene052266.t1	MTR_8g040180	59.064	171	66	3	3	171	17	185	8.81e-68	204
MS.gene052266.t1	MTR_7g110980	59.524	168	60	2	5	171	97	257	1.65e-67	206
MS.gene052266.t1	MTR_1g117010	59.649	171	58	3	5	171	78	241	5.02e-66	202
MS.gene052266.t1	MTR_1g117010	59.649	171	58	3	5	171	78	241	5.02e-66	202
MS.gene052266.t1	MTR_4g086760	57.714	175	68	3	1	171	1	173	3.95e-65	202
MS.gene052266.t1	MTR_4g086760	57.714	175	68	3	1	171	1	173	4.23e-65	203
MS.gene052266.t1	MTR_4g086760	57.714	175	68	3	1	171	1	173	4.84e-65	202
MS.gene052266.t1	MTR_3g070500	70.161	124	37	0	5	128	65	188	2.19e-62	191
MS.gene052266.t1	MTR_4g073650	53.571	168	77	1	5	171	47	214	4.06e-60	186
MS.gene052266.t1	MTR_3g107660	53.846	169	77	1	3	170	9	177	1.19e-54	185
MS.gene052266.t1	MTR_1g011980	52.071	169	79	2	3	170	6	173	1.56e-48	167
MS.gene052266.t1	MTR_3g070500	70.707	99	29	0	5	103	65	163	7.35e-48	153
MS.gene052266.t1	MTR_3g070500	70.408	98	29	0	5	102	65	162	1.41e-47	152
MS.gene052266.t1	MTR_7g105220	50.725	138	52	5	18	152	19	143	4.88e-35	120
MS.gene052266.t1	MTR_8g036015	51.049	143	54	5	18	157	10	139	1.03e-34	119
MS.gene052266.t1	MTR_2g085075	48.980	147	59	5	18	162	471	603	3.50e-34	126
MS.gene052266.t1	MTR_5g015500	49.265	136	57	4	18	152	314	438	8.79e-30	114
MS.gene052266.t1	MTR_5g015500	49.265	136	57	4	18	152	354	478	1.43e-29	113
MS.gene052266.t1	MTR_3g085705	48.760	121	57	3	37	157	7	122	2.33e-29	105
MS.gene052266.t1	MTR_6g084140	37.342	158	78	7	18	165	27	173	3.36e-20	87.0
MS.gene052266.t1	MTR_6g084140	37.342	158	78	7	18	165	10	156	3.47e-20	87.0
MS.gene052266.t1	MTR_8g442420	36.709	158	79	7	18	165	10	156	4.87e-19	83.6
MS.gene052266.t1	MTR_2g023120	42.742	124	58	5	18	139	22	134	1.77e-17	79.3
MS.gene052266.t1	MTR_1g094065	35.526	152	72	6	18	164	89	219	1.69e-14	68.9
MS.gene052266.t1	MTR_1g035360	30.573	157	91	5	18	171	88	229	4.46e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene052266.t1	AT2G16600	83.626	171	28	0	2	172	3	173	5.29e-108	306
MS.gene052266.t1	AT2G21130	83.626	171	28	0	2	172	3	173	3.86e-107	303
MS.gene052266.t1	AT4G38740	83.140	172	29	0	1	172	1	172	8.29e-106	300
MS.gene052266.t1	AT4G34870	81.395	172	32	0	1	172	1	172	1.02e-101	290
MS.gene052266.t1	AT3G56070	74.269	171	44	0	1	171	1	171	3.11e-94	271
MS.gene052266.t1	AT3G56070	74.269	171	44	0	1	171	1	171	3.11e-94	271
MS.gene052266.t1	AT2G16600	71.930	171	26	1	2	172	3	151	8.84e-86	249
MS.gene052266.t1	AT2G29960	67.665	167	54	0	5	171	33	199	1.22e-82	243
MS.gene052266.t1	AT2G29960	67.665	167	54	0	5	171	33	199	1.22e-82	243
MS.gene052266.t1	AT3G63400	68.421	171	53	1	3	172	6	176	2.81e-81	246
MS.gene052266.t1	AT5G58710	65.868	167	57	0	5	171	36	202	1.17e-79	235
MS.gene052266.t1	AT3G55920	65.476	168	58	0	5	172	60	227	1.41e-79	236
MS.gene052266.t1	AT3G63400	68.421	171	53	1	3	172	6	176	2.13e-79	246
MS.gene052266.t1	AT3G63400	68.421	171	53	1	3	172	6	176	2.13e-79	246
MS.gene052266.t1	AT3G63400	68.421	171	53	1	3	172	6	176	2.13e-79	246
MS.gene052266.t1	AT2G29960	63.473	167	51	1	5	171	33	189	1.04e-73	219
MS.gene052266.t1	AT5G13120	64.327	171	50	3	5	171	87	250	7.71e-73	219
MS.gene052266.t1	AT5G13120	64.327	171	50	3	5	171	91	254	7.84e-73	220
MS.gene052266.t1	AT3G62030	62.500	168	55	2	5	171	95	255	7.65e-71	215
MS.gene052266.t1	AT3G62030	62.500	168	55	2	5	171	96	256	8.07e-71	215
MS.gene052266.t1	AT3G62030	62.500	168	55	2	5	171	149	309	4.41e-70	214
MS.gene052266.t1	AT2G38730	59.064	171	66	3	3	171	31	199	6.55e-67	202
MS.gene052266.t1	AT2G15790	58.960	173	69	2	1	171	1	173	9.64e-66	205
MS.gene052266.t1	AT4G34960	52.976	168	78	1	5	171	48	215	9.03e-61	188
MS.gene052266.t1	AT3G22920	54.545	176	68	5	1	172	1	168	2.03e-59	185
MS.gene052266.t1	AT4G32420	50.888	169	82	1	3	170	6	174	5.43e-51	174
MS.gene052266.t1	AT4G32420	50.888	169	82	1	3	170	6	174	5.43e-51	174
MS.gene052266.t1	AT4G32420	50.888	169	82	1	3	170	6	174	5.43e-51	174
MS.gene052266.t1	AT4G32420	50.888	169	82	1	3	170	6	174	5.43e-51	174
MS.gene052266.t1	AT4G32420	51.592	157	75	1	3	158	6	162	1.06e-47	165
MS.gene052266.t1	AT4G34960	54.032	124	57	0	5	128	48	171	5.34e-47	151
MS.gene052266.t1	AT2G36130	45.399	163	70	6	2	163	8	152	5.35e-36	123
MS.gene052266.t1	AT1G01940	48.252	143	58	5	18	157	10	139	3.16e-33	115
MS.gene052266.t1	AT3G44600	48.980	147	59	6	18	162	485	617	5.82e-33	123
MS.gene052266.t1	AT5G67530	49.265	136	57	4	18	152	353	477	2.78e-29	112
MS.gene052266.t1	AT4G33060	46.400	125	54	5	18	140	22	135	9.26e-25	99.8
MS.gene052266.t1	AT1G53720	36.879	141	69	5	18	149	10	139	2.82e-18	80.9
MS.gene052266.t1	AT1G53720	36.879	141	69	5	18	149	10	139	5.33e-18	80.9

Find 63 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACTGAGATCCGTTGGTTCC+TGG	0.326133	4.2:-33531253	None:intergenic
CCTCCCTGACACATGAAGTT+AGG	0.347806	4.2:-33531112	None:intergenic
TTCGCCATGGAGAGGATTCC+AGG	0.356185	4.2:-33531223	None:intergenic
ATCAAGAAGCACACCGGTCC+TGG	0.379174	4.2:+33531205	MS.gene052266:CDS
GACGGAAAGCACGTCGTATT+CGG	0.401729	4.2:+33531307	MS.gene052266:CDS
CTAAGAGAGTTGACCGCAAT+CGG	0.418363	4.2:-33531416	None:intergenic
CGGTCAGGTTGTTGAAGGTC+TGG	0.429912	4.2:+33531327	MS.gene052266:CDS
CCGCAATCGGCGATCACGAC+TGG	0.431471	4.2:-33531403	None:intergenic
TCCATGGCGAACGCTGGTCC+AGG	0.445948	4.2:+33531235	MS.gene052266:CDS
GAGAAAGTCGGATCTGGATC+TGG	0.446422	4.2:+33531367	MS.gene052266:CDS
GCTCTCTGCACCGGCGAGAA+AGG	0.448573	4.2:+33531031	MS.gene052266:CDS
GAGATCGAGAAAGTCGGATC+TGG	0.448823	4.2:+33531361	MS.gene052266:CDS
GTCATATCGAAGAAAACCTT+AGG	0.459890	4.2:-33530929	None:intergenic
GGCGATCACGACTGGCTTCG+AGG	0.461154	4.2:-33531395	None:intergenic
GATCCCTAACTTCATGTGTC+AGG	0.471623	4.2:+33531108	MS.gene052266:CDS
CTCCCTGACACATGAAGTTA+GGG	0.480325	4.2:-33531111	None:intergenic
TTCACCAACGGAAACGGTAC+CGG	0.483169	4.2:+33531139	MS.gene052266:CDS
GTATTCGGTCAGGTTGTTGA+AGG	0.496891	4.2:+33531322	MS.gene052266:CDS
GTCGAGCCACTCTGTCTTAG+CGG	0.505495	4.2:-33531287	None:intergenic
GCCTCCGGTACCGTTTCCGT+TGG	0.509269	4.2:-33531143	None:intergenic
TCCGTAGATCGATTCGCCTC+CGG	0.512965	4.2:-33531158	None:intergenic
CATGGAGAGGATTCCAGGAC+CGG	0.517090	4.2:-33531218	None:intergenic
ACCGTCGGTGGCAACCCTGC+CGG	0.520375	4.2:+33530950	MS.gene052266:CDS
AAAGCACGTCGTATTCGGTC+AGG	0.529263	4.2:+33531312	MS.gene052266:CDS
ATCCTCTCCATGGCGAACGC+TGG	0.529724	4.2:+33531229	MS.gene052266:CDS
TCGAAGATGATACGTCCGGC+AGG	0.533363	4.2:-33530965	None:intergenic
GGTGATTTCACCAACGGAAA+CGG	0.538147	4.2:+33531133	MS.gene052266:CDS
TCCTGGACCAGCGTTCGCCA+TGG	0.539402	4.2:-33531236	None:intergenic
GGCGGTGCGGGGAGTGACAT+CGG	0.547631	4.2:-33530996	None:intergenic
TGCAACCATGTCTAACCCTA+AGG	0.552767	4.2:+33530913	None:intergenic
GACGAAGAACTGAGATCCGT+TGG	0.556022	4.2:-33531260	None:intergenic
GGCAAACCACTCCACTTCAA+AGG	0.560943	4.2:+33531067	MS.gene052266:CDS
GCGGCCGACTCCTTTCTCGC+CGG	0.566187	4.2:-33531041	None:intergenic
ACCGGAGGCGAATCGATCTA+CGG	0.566609	4.2:+33531157	MS.gene052266:CDS
ATCCCTAACTTCATGTGTCA+GGG	0.567025	4.2:+33531109	MS.gene052266:CDS
TCCGGCAGGGTTGCCACCGA+CGG	0.568975	4.2:-33530951	None:intergenic
GAAGATCCTTTGAAGTGGAG+TGG	0.570002	4.2:-33531073	None:intergenic
GTTAGGGATCACACGGTGGA+AGG	0.570770	4.2:-33531095	None:intergenic
AATTTCCGTGCTCTCTGCAC+CGG	0.573568	4.2:+33531022	MS.gene052266:CDS
TCATATCGAAGAAAACCTTA+GGG	0.575419	4.2:-33530928	None:intergenic
TCTCGCCGGTGCAGAGAGCA+CGG	0.577434	4.2:-33531027	None:intergenic
AAGCTCGAAGATGATACGTC+CGG	0.581315	4.2:-33530969	None:intergenic
TTCTTCGATATGACCGTCGG+TGG	0.589305	4.2:+33530938	MS.gene052266:CDS
CGGTCCTGGAATCCTCTCCA+TGG	0.589882	4.2:+33531219	MS.gene052266:CDS
TGAAGGTCTGGAAGTTGTGA+AGG	0.598033	4.2:+33531339	MS.gene052266:CDS
GAGAAAGGAGTCGGCCGCAG+CGG	0.599935	4.2:+33531046	MS.gene052266:CDS
GGAAGGAAGATCCTTTGAAG+TGG	0.600412	4.2:-33531078	None:intergenic
AGTGGAGTGGTTTGCCGCTG+CGG	0.604904	4.2:-33531060	None:intergenic
AACGCTGGTCCAGGAACCAA+CGG	0.606157	4.2:+33531244	MS.gene052266:CDS
GACCAGCGTTCGCCATGGAG+AGG	0.613724	4.2:-33531231	None:intergenic
TGCACCGGCGAGAAAGGAGT+CGG	0.616021	4.2:+33531037	MS.gene052266:CDS
CAGGGAGGTGATTTCACCAA+CGG	0.616760	4.2:+33531127	MS.gene052266:CDS
GTGAAGGAGATCGAGAAAGT+CGG	0.624253	4.2:+33531355	MS.gene052266:CDS
CGAAGATGATACGTCCGGCA+GGG	0.628794	4.2:-33530964	None:intergenic
GAAAACCTTAGGGTTAGACA+TGG	0.661297	4.2:-33530918	None:intergenic
GCTAAGACAGAGTGGCTCGA+CGG	0.664017	4.2:+33531289	MS.gene052266:CDS
ACATGAAGTTAGGGATCACA+CGG	0.667907	4.2:-33531102	None:intergenic
ACCAACGGAAACGGTACCGG+AGG	0.677978	4.2:+33531142	MS.gene052266:CDS
AATTTCATCAAGAAGCACAC+CGG	0.680067	4.2:+33531199	MS.gene052266:CDS
CCAGTCGTGATCGCCGATTG+CGG	0.685460	4.2:+33531403	MS.gene052266:CDS
CCTAACTTCATGTGTCAGGG+AGG	0.694044	4.2:+33531112	MS.gene052266:CDS
TCTGCACCGCTAAGACAGAG+TGG	0.718339	4.2:+33531281	MS.gene052266:CDS
TGAAGTTAGGGATCACACGG+TGG	0.759029	4.2:-33531099	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	TCATATCGAAGAAAACCTTA+GGG	-	chr4.2:33530931-33530950	None:intergenic	30.0%
	GTCATATCGAAGAAAACCTT+AGG	-	chr4.2:33530932-33530951	None:intergenic	35.0%
!	AATTTCATCAAGAAGCACAC+CGG	+	chr4.2:33531199-33531218	MS.gene052266:CDS	35.0%
	ACATGAAGTTAGGGATCACA+CGG	-	chr4.2:33531105-33531124	None:intergenic	40.0%
	ATCCCTAACTTCATGTGTCA+GGG	+	chr4.2:33531109-33531128	MS.gene052266:CDS	40.0%
!	GTTTTCTTCGATATGACCGT+CGG	+	chr4.2:33530935-33530954	MS.gene052266:CDS	40.0%
	AAGCTCGAAGATGATACGTC+CGG	-	chr4.2:33530972-33530991	None:intergenic	45.0%
	CTAAGAGAGTTGACCGCAAT+CGG	-	chr4.2:33531419-33531438	None:intergenic	45.0%
	CTCCCTGACACATGAAGTTA+GGG	-	chr4.2:33531114-33531133	None:intergenic	45.0%
	GATCCCTAACTTCATGTGTC+AGG	+	chr4.2:33531108-33531127	MS.gene052266:CDS	45.0%
	GGTGATTTCACCAACGGAAA+CGG	+	chr4.2:33531133-33531152	MS.gene052266:CDS	45.0%
	GTGAAGGAGATCGAGAAAGT+CGG	+	chr4.2:33531355-33531374	MS.gene052266:CDS	45.0%
	TGAAGGTCTGGAAGTTGTGA+AGG	+	chr4.2:33531339-33531358	MS.gene052266:CDS	45.0%
!	GGAAGGAAGATCCTTTGAAG+TGG	-	chr4.2:33531081-33531100	None:intergenic	45.0%
!	GTATTCGGTCAGGTTGTTGA+AGG	+	chr4.2:33531322-33531341	MS.gene052266:CDS	45.0%
!!	GAAGATCCTTTGAAGTGGAG+TGG	-	chr4.2:33531076-33531095	None:intergenic	45.0%
!!	GCAGAGAGCACGGAAATTTT+CGG	-	chr4.2:33531020-33531039	None:intergenic	45.0%
	AAAGCACGTCGTATTCGGTC+AGG	+	chr4.2:33531312-33531331	MS.gene052266:CDS	50.0%
	AATTTCCGTGCTCTCTGCAC+CGG	+	chr4.2:33531022-33531041	MS.gene052266:CDS	50.0%
	CAGGGAGGTGATTTCACCAA+CGG	+	chr4.2:33531127-33531146	MS.gene052266:CDS	50.0%
	CCTAACTTCATGTGTCAGGG+AGG	+	chr4.2:33531112-33531131	MS.gene052266:CDS	50.0%
	CCTCCCTGACACATGAAGTT+AGG	-	chr4.2:33531115-33531134	None:intergenic	50.0%
	GACGAAGAACTGAGATCCGT+TGG	-	chr4.2:33531263-33531282	None:intergenic	50.0%
	GAGAAAGTCGGATCTGGATC+TGG	+	chr4.2:33531367-33531386	MS.gene052266:CDS	50.0%
	GAGATCGAGAAAGTCGGATC+TGG	+	chr4.2:33531361-33531380	MS.gene052266:CDS	50.0%
	GGCAAACCACTCCACTTCAA+AGG	+	chr4.2:33531067-33531086	MS.gene052266:CDS	50.0%
	TGAAGTTAGGGATCACACGG+TGG	-	chr4.2:33531102-33531121	None:intergenic	50.0%
	TTCACCAACGGAAACGGTAC+CGG	+	chr4.2:33531139-33531158	MS.gene052266:CDS	50.0%
	TTCTTCGATATGACCGTCGG+TGG	+	chr4.2:33530938-33530957	MS.gene052266:CDS	50.0%
!	GACGGAAAGCACGTCGTATT+CGG	+	chr4.2:33531307-33531326	MS.gene052266:CDS	50.0%
!!	AACTGAGATCCGTTGGTTCC+TGG	-	chr4.2:33531256-33531275	None:intergenic	50.0%
!!	GAGAGCACGGAAATTTTCGG+CGG	-	chr4.2:33531017-33531036	None:intergenic	50.0%
	AACGCTGGTCCAGGAACCAA+CGG	+	chr4.2:33531244-33531263	MS.gene052266:CDS	55.0%
	ACCGGAGGCGAATCGATCTA+CGG	+	chr4.2:33531157-33531176	MS.gene052266:CDS	55.0%
	CATGGAGAGGATTCCAGGAC+CGG	-	chr4.2:33531221-33531240	None:intergenic	55.0%
	CGAAGATGATACGTCCGGCA+GGG	-	chr4.2:33530967-33530986	None:intergenic	55.0%
	GCTAAGACAGAGTGGCTCGA+CGG	+	chr4.2:33531289-33531308	MS.gene052266:CDS	55.0%
	GTCGAGCCACTCTGTCTTAG+CGG	-	chr4.2:33531290-33531309	None:intergenic	55.0%
	GTTAGGGATCACACGGTGGA+AGG	-	chr4.2:33531098-33531117	None:intergenic	55.0%
	TCGAAGATGATACGTCCGGC+AGG	-	chr4.2:33530968-33530987	None:intergenic	55.0%
	TCTGCACCGCTAAGACAGAG+TGG	+	chr4.2:33531281-33531300	MS.gene052266:CDS	55.0%
	TTCGCCATGGAGAGGATTCC+AGG	-	chr4.2:33531226-33531245	None:intergenic	55.0%
!	ACGGAAATTTTCGGCGGTGC+GGG	-	chr4.2:33531011-33531030	None:intergenic	55.0%
!	ATCAAGAAGCACACCGGTCC+TGG	+	chr4.2:33531205-33531224	MS.gene052266:CDS	55.0%
!	CACGGAAATTTTCGGCGGTG+CGG	-	chr4.2:33531012-33531031	None:intergenic	55.0%
!	CGGTCAGGTTGTTGAAGGTC+TGG	+	chr4.2:33531327-33531346	MS.gene052266:CDS	55.0%
!!	TCCGTAGATCGATTCGCCTC+CGG	-	chr4.2:33531161-33531180	None:intergenic	55.0%
	ATCCTCTCCATGGCGAACGC+TGG	+	chr4.2:33531229-33531248	MS.gene052266:CDS	60.0%
	CGGTCCTGGAATCCTCTCCA+TGG	+	chr4.2:33531219-33531238	MS.gene052266:CDS	60.0%
!	ACCAACGGAAACGGTACCGG+AGG	+	chr4.2:33531142-33531161	MS.gene052266:CDS	60.0%
!	AGTGGAGTGGTTTGCCGCTG+CGG	-	chr4.2:33531063-33531082	None:intergenic	60.0%
!	CCAGTCGTGATCGCCGATTG+CGG	+	chr4.2:33531403-33531422	MS.gene052266:CDS	60.0%
!	CGGAAATTTTCGGCGGTGCG+GGG	-	chr4.2:33531010-33531029	None:intergenic	60.0%
!	TGCACCGGCGAGAAAGGAGT+CGG	+	chr4.2:33531037-33531056	MS.gene052266:CDS	60.0%
	CCGCAATCGGCGATCACGAC+TGG	-	chr4.2:33531406-33531425	None:intergenic	65.0%
	GACCAGCGTTCGCCATGGAG+AGG	-	chr4.2:33531234-33531253	None:intergenic	65.0%
	GAGAAAGGAGTCGGCCGCAG+CGG	+	chr4.2:33531046-33531065	MS.gene052266:CDS	65.0%
	GCCTCCGGTACCGTTTCCGT+TGG	-	chr4.2:33531146-33531165	None:intergenic	65.0%
	TCCATGGCGAACGCTGGTCC+AGG	+	chr4.2:33531235-33531254	MS.gene052266:CDS	65.0%
	TCCTGGACCAGCGTTCGCCA+TGG	-	chr4.2:33531239-33531258	None:intergenic	65.0%
	TCTCGCCGGTGCAGAGAGCA+CGG	-	chr4.2:33531030-33531049	None:intergenic	65.0%
!	GCTCTCTGCACCGGCGAGAA+AGG	+	chr4.2:33531031-33531050	MS.gene052266:CDS	65.0%
!!	GGCGATCACGACTGGCTTCG+AGG	-	chr4.2:33531398-33531417	None:intergenic	65.0%
	ACCGTCGGTGGCAACCCTGC+CGG	+	chr4.2:33530950-33530969	MS.gene052266:CDS	70.0%
	GGCGGTGCGGGGAGTGACAT+CGG	-	chr4.2:33530999-33531018	None:intergenic	70.0%
	TCCGGCAGGGTTGCCACCGA+CGG	-	chr4.2:33530954-33530973	None:intergenic	70.0%
!	GCGGCCGACTCCTTTCTCGC+CGG	-	chr4.2:33531044-33531063	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	33530920	33531438	33530920	ID=MS.gene052266
chr4.2	mRNA	33530920	33531438	33530920	ID=MS.gene052266.t1;Parent=MS.gene052266
chr4.2	exon	33530920	33531438	33530920	ID=MS.gene052266.t1.exon1;Parent=MS.gene052266.t1
chr4.2	CDS	33530920	33531438	33530920	ID=cds.MS.gene052266.t1;Parent=MS.gene052266.t1

Gene Sequence

>MS.gene052266

ATGTCTAACCCTAAGGTTTTCTTCGATATGACCGTCGGTGGCAACCCTGCCGGACGTATCATCTTCGAGCTTTTCGCCGATGTCACTCCCCGCACCGCCGAAAATTTCCGTGCTCTCTGCACCGGCGAGAAAGGAGTCGGCCGCAGCGGCAAACCACTCCACTTCAAAGGATCTTCCTTCCACCGTGTGATCCCTAACTTCATGTGTCAGGGAGGTGATTTCACCAACGGAAACGGTACCGGAGGCGAATCGATCTACGGATCAAAGTTCGCTGATGAGAATTTCATCAAGAAGCACACCGGTCCTGGAATCCTCTCCATGGCGAACGCTGGTCCAGGAACCAACGGATCTCAGTTCTTCGTCTGCACCGCTAAGACAGAGTGGCTCGACGGAAAGCACGTCGTATTCGGTCAGGTTGTTGAAGGTCTGGAAGTTGTGAAGGAGATCGAGAAAGTCGGATCTGGATCTGGAAAGACCTCGAAGCCAGTCGTGATCGCCGATTGCGGTCAACTCTCTTAG

Protein sequence

>MS.gene052266.t1

MSNPKVFFDMTVGGNPAGRIIFELFADVTPRTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTNGNGTGGESIYGSKFADENFIKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGLEVVKEIEKVGSGSGKTSKPVVIADCGQLS