Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050281.t1 | XP_004494215.1 | 98.8 | 164 | 2 | 0 | 1 | 164 | 1 | 164 | 9.60E-90 | 339.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050281.t1 | Q9SIH1 | 86.6 | 164 | 22 | 0 | 1 | 164 | 1 | 164 | 2.0e-80 | 299.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050281.t1 | A0A1S2XVA2 | 98.8 | 164 | 2 | 0 | 1 | 164 | 1 | 164 | 6.9e-90 | 339.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050252 | MS.gene050281 | 0.818667 | 1.74E-52 | -1.69E-46 |
| MS.gene050281 | MS.gene051904 | 0.864951 | 8.40E-65 | -1.69E-46 |
| MS.gene050281 | MS.gene072769 | 0.806598 | 7.61E-50 | -1.69E-46 |
| MS.gene050281 | MS.gene21636 | 0.817308 | 3.53E-52 | -1.69E-46 |
| MS.gene050281 | MS.gene23126 | 0.813263 | 2.80E-51 | -1.69E-46 |
| MS.gene050281 | MS.gene23437 | 0.837045 | 6.55E-57 | -1.69E-46 |
| MS.gene050281 | MS.gene24706 | 0.803736 | 3.02E-49 | -1.69E-46 |
| MS.gene050281 | MS.gene96225 | 0.800942 | 1.14E-48 | -1.69E-46 |
| MS.gene050281 | MS.gene96825 | 0.813918 | 2.01E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050281 | MS.gene04515 | PPI |
| MS.gene050574 | MS.gene050281 | PPI |
| MS.gene050281 | MS.gene04526 | PPI |
| MS.gene063104 | MS.gene050281 | PPI |
| MS.gene050281 | MS.gene019366 | PPI |
| MS.gene28703 | MS.gene050281 | PPI |
| MS.gene063787 | MS.gene050281 | PPI |
| MS.gene025980 | MS.gene050281 | PPI |
| MS.gene68153 | MS.gene050281 | PPI |
| MS.gene050281 | MS.gene28963 | PPI |
| MS.gene052269 | MS.gene050281 | PPI |
| MS.gene050281 | MS.gene23546 | PPI |
| MS.gene050281 | MS.gene014216 | PPI |
| MS.gene050281 | MS.gene024514 | PPI |
| MS.gene050281 | MS.gene063104 | PPI |
| MS.gene050281 | MS.gene051153 | PPI |
| MS.gene23663 | MS.gene050281 | PPI |
| MS.gene050281 | MS.gene052266 | PPI |
| MS.gene39668 | MS.gene050281 | PPI |
| MS.gene61767 | MS.gene050281 | PPI |
| MS.gene28963 | MS.gene050281 | PPI |
| MS.gene050281 | MS.gene003412 | PPI |
| MS.gene68752 | MS.gene050281 | PPI |
| MS.gene88451 | MS.gene050281 | PPI |
| MS.gene050281 | MS.gene048458 | PPI |
| MS.gene22872 | MS.gene050281 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050281.t1 | MTR_7g105220 | 98.780 | 164 | 2 | 0 | 1 | 164 | 1 | 164 | 1.96e-121 | 339 |
| MS.gene050281.t1 | MTR_8g036015 | 50.331 | 151 | 75 | 0 | 12 | 162 | 3 | 153 | 2.87e-53 | 166 |
| MS.gene050281.t1 | MTR_2g085075 | 52.597 | 154 | 72 | 1 | 10 | 162 | 461 | 614 | 2.22e-52 | 176 |
| MS.gene050281.t1 | MTR_5g015500 | 52.055 | 146 | 70 | 0 | 12 | 157 | 307 | 452 | 9.35e-50 | 167 |
| MS.gene050281.t1 | MTR_5g015500 | 52.055 | 146 | 70 | 0 | 12 | 157 | 347 | 492 | 1.86e-49 | 167 |
| MS.gene050281.t1 | MTR_2g023120 | 53.247 | 154 | 70 | 2 | 11 | 162 | 14 | 167 | 6.88e-43 | 149 |
| MS.gene050281.t1 | MTR_1g085560 | 50.336 | 149 | 68 | 5 | 17 | 160 | 97 | 244 | 5.67e-40 | 135 |
| MS.gene050281.t1 | MTR_1g117010 | 49.306 | 144 | 68 | 4 | 18 | 157 | 93 | 235 | 1.29e-39 | 134 |
| MS.gene050281.t1 | MTR_1g117010 | 49.306 | 144 | 68 | 4 | 18 | 157 | 93 | 235 | 1.29e-39 | 134 |
| MS.gene050281.t1 | MTR_7g110980 | 50.000 | 146 | 68 | 4 | 17 | 158 | 108 | 252 | 2.78e-39 | 134 |
| MS.gene050281.t1 | MTR_4g086760 | 48.684 | 152 | 65 | 4 | 19 | 158 | 18 | 168 | 3.28e-38 | 132 |
| MS.gene050281.t1 | MTR_4g086760 | 48.684 | 152 | 65 | 4 | 19 | 158 | 18 | 168 | 4.14e-38 | 132 |
| MS.gene050281.t1 | MTR_4g086760 | 48.684 | 152 | 65 | 4 | 19 | 158 | 18 | 168 | 5.25e-38 | 133 |
| MS.gene050281.t1 | MTR_6g084140 | 42.138 | 159 | 84 | 2 | 12 | 162 | 3 | 161 | 6.46e-37 | 134 |
| MS.gene050281.t1 | MTR_8g040180 | 47.552 | 143 | 64 | 4 | 19 | 151 | 32 | 173 | 7.19e-37 | 125 |
| MS.gene050281.t1 | MTR_6g084140 | 42.138 | 159 | 84 | 2 | 12 | 162 | 20 | 178 | 7.58e-37 | 134 |
| MS.gene050281.t1 | MTR_7g116340 | 47.973 | 148 | 65 | 4 | 19 | 155 | 18 | 164 | 9.99e-37 | 125 |
| MS.gene050281.t1 | MTR_8g079690 | 44.242 | 165 | 74 | 5 | 10 | 157 | 4 | 167 | 1.68e-36 | 129 |
| MS.gene050281.t1 | MTR_8g442420 | 41.509 | 159 | 85 | 2 | 12 | 162 | 3 | 161 | 1.65e-35 | 130 |
| MS.gene050281.t1 | MTR_3g117750 | 51.079 | 139 | 52 | 5 | 18 | 143 | 25 | 160 | 5.99e-35 | 120 |
| MS.gene050281.t1 | MTR_4g075290 | 48.684 | 152 | 57 | 6 | 10 | 143 | 4 | 152 | 1.16e-34 | 119 |
| MS.gene050281.t1 | MTR_3g463900 | 49.624 | 133 | 55 | 4 | 19 | 140 | 48 | 179 | 1.36e-34 | 120 |
| MS.gene050281.t1 | MTR_7g095750 | 47.297 | 148 | 64 | 5 | 23 | 158 | 25 | 170 | 6.95e-34 | 125 |
| MS.gene050281.t1 | MTR_3g070500 | 48.889 | 135 | 57 | 4 | 17 | 140 | 76 | 209 | 5.01e-33 | 117 |
| MS.gene050281.t1 | MTR_4g073650 | 40.458 | 131 | 66 | 3 | 18 | 137 | 59 | 188 | 3.24e-27 | 102 |
| MS.gene050281.t1 | MTR_3g070500 | 52.778 | 108 | 39 | 4 | 17 | 113 | 76 | 182 | 3.38e-24 | 93.2 |
| MS.gene050281.t1 | MTR_1g094065 | 33.113 | 151 | 95 | 2 | 13 | 163 | 83 | 227 | 3.04e-23 | 92.0 |
| MS.gene050281.t1 | MTR_3g107660 | 38.286 | 175 | 89 | 6 | 1 | 158 | 1 | 173 | 6.55e-21 | 89.0 |
| MS.gene050281.t1 | MTR_1g035360 | 30.263 | 152 | 99 | 3 | 13 | 163 | 82 | 227 | 1.39e-19 | 82.4 |
| MS.gene050281.t1 | MTR_1g011980 | 42.424 | 132 | 62 | 4 | 24 | 143 | 26 | 155 | 5.81e-19 | 83.2 |
| MS.gene050281.t1 | MTR_3g085705 | 43.878 | 98 | 51 | 2 | 54 | 151 | 32 | 125 | 7.53e-18 | 75.1 |
| MS.gene050281.t1 | MTR_5g039210 | 31.544 | 149 | 84 | 5 | 8 | 145 | 24 | 165 | 5.89e-13 | 63.9 |
| MS.gene050281.t1 | MTR_5g039210 | 31.544 | 149 | 84 | 5 | 8 | 145 | 24 | 165 | 9.67e-13 | 63.9 |
| MS.gene050281.t1 | MTR_3g070500 | 47.126 | 87 | 34 | 4 | 17 | 92 | 76 | 161 | 2.13e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050281.t1 | AT2G36130 | 86.585 | 164 | 22 | 0 | 1 | 164 | 1 | 164 | 2.93e-106 | 301 |
| MS.gene050281.t1 | AT1G01940 | 50.331 | 151 | 75 | 0 | 12 | 162 | 3 | 153 | 3.66e-53 | 166 |
| MS.gene050281.t1 | AT3G44600 | 52.500 | 160 | 75 | 1 | 4 | 162 | 469 | 628 | 7.54e-53 | 177 |
| MS.gene050281.t1 | AT5G67530 | 49.669 | 151 | 76 | 0 | 12 | 162 | 346 | 496 | 1.92e-49 | 167 |
| MS.gene050281.t1 | AT4G33060 | 50.968 | 155 | 73 | 3 | 11 | 162 | 14 | 168 | 4.33e-44 | 152 |
| MS.gene050281.t1 | AT3G62030 | 51.748 | 143 | 64 | 3 | 19 | 157 | 108 | 249 | 1.90e-38 | 132 |
| MS.gene050281.t1 | AT3G62030 | 51.748 | 143 | 64 | 3 | 19 | 157 | 109 | 250 | 1.99e-38 | 132 |
| MS.gene050281.t1 | AT1G53720 | 40.994 | 161 | 87 | 3 | 12 | 164 | 3 | 163 | 6.27e-38 | 133 |
| MS.gene050281.t1 | AT3G62030 | 51.748 | 143 | 64 | 3 | 19 | 157 | 162 | 303 | 7.74e-38 | 132 |
| MS.gene050281.t1 | AT5G13120 | 48.252 | 143 | 69 | 4 | 19 | 157 | 103 | 244 | 1.27e-37 | 129 |
| MS.gene050281.t1 | AT5G13120 | 48.252 | 143 | 69 | 4 | 19 | 157 | 107 | 248 | 1.55e-37 | 129 |
| MS.gene050281.t1 | AT2G21130 | 46.914 | 162 | 66 | 6 | 7 | 157 | 14 | 166 | 8.44e-37 | 125 |
| MS.gene050281.t1 | AT4G38740 | 48.000 | 150 | 65 | 5 | 19 | 157 | 18 | 165 | 1.76e-36 | 124 |
| MS.gene050281.t1 | AT3G56070 | 50.360 | 139 | 57 | 3 | 19 | 146 | 18 | 155 | 2.59e-36 | 124 |
| MS.gene050281.t1 | AT3G56070 | 50.360 | 139 | 57 | 3 | 19 | 146 | 18 | 155 | 2.59e-36 | 124 |
| MS.gene050281.t1 | AT1G53720 | 40.994 | 161 | 87 | 3 | 12 | 164 | 3 | 163 | 2.70e-36 | 131 |
| MS.gene050281.t1 | AT2G15790 | 47.020 | 151 | 67 | 4 | 19 | 157 | 18 | 167 | 4.48e-36 | 128 |
| MS.gene050281.t1 | AT3G63400 | 45.181 | 166 | 72 | 5 | 10 | 158 | 7 | 170 | 1.49e-35 | 127 |
| MS.gene050281.t1 | AT2G29960 | 48.889 | 135 | 57 | 4 | 17 | 140 | 44 | 177 | 3.73e-35 | 122 |
| MS.gene050281.t1 | AT2G29960 | 48.889 | 135 | 57 | 4 | 17 | 140 | 44 | 177 | 3.73e-35 | 122 |
| MS.gene050281.t1 | AT4G34870 | 47.586 | 145 | 60 | 4 | 16 | 147 | 15 | 156 | 4.67e-35 | 120 |
| MS.gene050281.t1 | AT2G38730 | 46.012 | 163 | 72 | 6 | 10 | 157 | 32 | 193 | 5.81e-35 | 121 |
| MS.gene050281.t1 | AT2G16600 | 48.344 | 151 | 60 | 6 | 17 | 152 | 17 | 164 | 7.40e-35 | 120 |
| MS.gene050281.t1 | AT3G55920 | 44.444 | 153 | 72 | 4 | 19 | 160 | 73 | 223 | 2.28e-34 | 120 |
| MS.gene050281.t1 | AT3G63400 | 45.181 | 166 | 72 | 5 | 10 | 158 | 7 | 170 | 3.02e-34 | 126 |
| MS.gene050281.t1 | AT3G63400 | 45.181 | 166 | 72 | 5 | 10 | 158 | 7 | 170 | 3.02e-34 | 126 |
| MS.gene050281.t1 | AT3G63400 | 45.181 | 166 | 72 | 5 | 10 | 158 | 7 | 170 | 3.02e-34 | 126 |
| MS.gene050281.t1 | AT5G58710 | 47.407 | 135 | 59 | 3 | 17 | 140 | 47 | 180 | 4.68e-33 | 116 |
| MS.gene050281.t1 | AT2G29960 | 44.444 | 135 | 53 | 5 | 17 | 140 | 44 | 167 | 1.19e-27 | 102 |
| MS.gene050281.t1 | AT2G16600 | 45.070 | 142 | 56 | 5 | 17 | 152 | 17 | 142 | 4.95e-27 | 99.8 |
| MS.gene050281.t1 | AT4G34960 | 40.310 | 129 | 65 | 4 | 18 | 135 | 60 | 187 | 3.72e-25 | 96.7 |
| MS.gene050281.t1 | AT2G47320 | 30.000 | 150 | 101 | 2 | 13 | 162 | 81 | 226 | 3.04e-19 | 81.3 |
| MS.gene050281.t1 | AT4G34960 | 41.121 | 107 | 51 | 3 | 18 | 113 | 60 | 165 | 3.91e-19 | 79.7 |
| MS.gene050281.t1 | AT4G32420 | 35.465 | 172 | 92 | 6 | 5 | 159 | 2 | 171 | 2.64e-18 | 81.3 |
| MS.gene050281.t1 | AT4G32420 | 35.465 | 172 | 92 | 6 | 5 | 159 | 2 | 171 | 2.64e-18 | 81.3 |
| MS.gene050281.t1 | AT4G32420 | 35.465 | 172 | 92 | 6 | 5 | 159 | 2 | 171 | 2.64e-18 | 81.3 |
| MS.gene050281.t1 | AT4G32420 | 35.465 | 172 | 92 | 6 | 5 | 159 | 2 | 171 | 2.64e-18 | 81.3 |
| MS.gene050281.t1 | AT4G32420 | 34.911 | 169 | 91 | 6 | 5 | 156 | 2 | 168 | 1.90e-16 | 76.3 |
| MS.gene050281.t1 | AT3G66654 | 28.261 | 138 | 98 | 1 | 14 | 151 | 85 | 221 | 5.09e-16 | 73.2 |
| MS.gene050281.t1 | AT3G66654 | 28.261 | 138 | 98 | 1 | 14 | 151 | 85 | 221 | 5.09e-16 | 73.2 |
| MS.gene050281.t1 | AT3G66654 | 28.261 | 138 | 98 | 1 | 14 | 151 | 85 | 221 | 5.09e-16 | 73.2 |
| MS.gene050281.t1 | AT3G66654 | 28.261 | 138 | 98 | 1 | 14 | 151 | 85 | 221 | 5.09e-16 | 73.2 |
| MS.gene050281.t1 | AT3G66654 | 28.261 | 138 | 98 | 1 | 14 | 151 | 85 | 221 | 5.09e-16 | 73.2 |
| MS.gene050281.t1 | AT1G53780 | 41.667 | 84 | 48 | 1 | 80 | 162 | 4 | 87 | 1.03e-15 | 73.9 |
| MS.gene050281.t1 | AT1G26940 | 30.952 | 168 | 105 | 5 | 6 | 164 | 28 | 193 | 4.63e-13 | 64.7 |
| MS.gene050281.t1 | AT1G26940 | 30.247 | 162 | 102 | 5 | 12 | 164 | 3 | 162 | 9.08e-12 | 60.8 |
Find 53 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGACTTCCGTTAGTATT+AGG | 0.209355 | 7.3:+9360191 | None:intergenic |
| TCTCGCACCGTGCCCCTCTT+TGG | 0.259093 | 7.3:-9360159 | MS.gene050281:CDS |
| ATGAAGTTCCTACAAGTTCT+AGG | 0.269440 | 7.3:+9360858 | None:intergenic |
| ACTGACTTCCGTTAGTATTA+GGG | 0.308819 | 7.3:+9360192 | None:intergenic |
| ACCTGTCATTGTTATCTGTT+TGG | 0.338632 | 7.3:+9359277 | None:intergenic |
| AGAGGAGGAGAATCCATCTA+TGG | 0.352009 | 7.3:-9360650 | MS.gene050281:CDS |
| CCAGGAAAACACACAATATT+CGG | 0.372270 | 7.3:-9359345 | MS.gene050281:intron |
| AGTTAAAGCATACCCATAGA+TGG | 0.430770 | 7.3:+9360637 | None:intergenic |
| AATATTCGGAAGAGTAAGTC+GGG | 0.456454 | 7.3:-9359331 | MS.gene050281:CDS |
| GGTGGGGATCCCACTGGGAC+AGG | 0.457978 | 7.3:-9360674 | MS.gene050281:CDS |
| GATCCCACTGGGACAGGAAG+AGG | 0.463282 | 7.3:-9360668 | MS.gene050281:CDS |
| AAGCGCAGAAGGTGGTGCTC+CGG | 0.493778 | 7.3:-9361030 | MS.gene050281:CDS |
| GAGCTGAAGCACACTGGAGC+TGG | 0.513405 | 7.3:-9360239 | MS.gene050281:CDS |
| CCTCCTCTTCCTGTCCCAGT+GGG | 0.517919 | 7.3:+9360665 | None:intergenic |
| GATAAATTACCATCCAAAGA+GGG | 0.534312 | 7.3:+9360146 | None:intergenic |
| GCACCGTGCCCCTCTTTGGA+TGG | 0.536332 | 7.3:-9360155 | MS.gene050281:intron |
| CGCAGAAGGTGGTGCTCCGG+AGG | 0.537673 | 7.3:-9361027 | MS.gene050281:CDS |
| CGGAAGAGTAAGTCGGGGAA+TGG | 0.538120 | 7.3:-9359325 | MS.gene050281:CDS |
| AAAATGTGGGCAAGCGCAGA+AGG | 0.539071 | 7.3:-9361041 | MS.gene050281:CDS |
| GAGTAGGATTTCATAGTACA+AGG | 0.541774 | 7.3:-9360695 | MS.gene050281:intron |
| AGGATTTCATAGTACAAGGT+GGG | 0.556519 | 7.3:-9360691 | MS.gene050281:CDS |
| TCCGTAGTATCTTCACATCA+TGG | 0.557400 | 7.3:+9358425 | None:intergenic |
| TCCAAACAGATAACAATGAC+AGG | 0.562883 | 7.3:-9359278 | MS.gene050281:intron |
| TCCTCCTCTTCCTGTCCCAG+TGG | 0.564512 | 7.3:+9360664 | None:intergenic |
| AATAATAATAATTACCTCGA+CGG | 0.570411 | 7.3:+9360974 | None:intergenic |
| TACAAGGTGGGGATCCCACT+GGG | 0.581439 | 7.3:-9360679 | MS.gene050281:CDS |
| GGTTACTCTAGAAACTTCCA+TGG | 0.582783 | 7.3:-9361006 | MS.gene050281:CDS |
| TAGTATCTTCACATCATGGA+CGG | 0.585917 | 7.3:+9358429 | None:intergenic |
| GTACAAGGTGGGGATCCCAC+TGG | 0.586480 | 7.3:-9360680 | MS.gene050281:CDS |
| AGTATCTTCACATCATGGAC+GGG | 0.587817 | 7.3:+9358430 | None:intergenic |
| AGCATGCACCTAGAACTTGT+AGG | 0.588442 | 7.3:-9360866 | MS.gene050281:CDS |
| AAACAAGAGCTGAAGCACAC+TGG | 0.591406 | 7.3:-9360245 | MS.gene050281:CDS |
| TCCATGATGTGAAGATACTA+CGG | 0.592850 | 7.3:-9358426 | MS.gene050281:CDS |
| GAGGAGGAGAATCCATCTAT+GGG | 0.597355 | 7.3:-9360649 | MS.gene050281:intron |
| CAATATTCGGAAGAGTAAGT+CGG | 0.597820 | 7.3:-9359332 | MS.gene050281:CDS |
| TAAGTTCCACAGAATCATCA+AGG | 0.601613 | 7.3:-9360802 | MS.gene050281:intron |
| AGATAAATTACCATCCAAAG+AGG | 0.606617 | 7.3:+9360145 | None:intergenic |
| ATGGAAATCATCAAAAGACT+TGG | 0.607942 | 7.3:-9359306 | MS.gene050281:CDS |
| GAAGTTTCTAGAGTAACCTC+CGG | 0.610654 | 7.3:+9361011 | None:intergenic |
| CCCACTGGGACAGGAAGAGG+AGG | 0.622286 | 7.3:-9360665 | MS.gene050281:CDS |
| CTCGACGGTGAATGAACCCA+TGG | 0.626061 | 7.3:+9360989 | None:intergenic |
| GGATTTCATAGTACAAGGTG+GGG | 0.626995 | 7.3:-9360690 | MS.gene050281:CDS |
| TTCATTGAACTATCTCGTAG+AGG | 0.631851 | 7.3:-9360840 | MS.gene050281:CDS |
| TGAATACCTTGATGATTCTG+TGG | 0.644502 | 7.3:+9360796 | None:intergenic |
| AATGCTGGCCCTAATACTAA+CGG | 0.646655 | 7.3:-9360200 | MS.gene050281:CDS |
| TAGGATTTCATAGTACAAGG+TGG | 0.656984 | 7.3:-9360692 | MS.gene050281:CDS |
| GATACTACGGACATCAGTCA+AGG | 0.657156 | 7.3:-9358413 | MS.gene050281:CDS |
| ATGTGGGCAAGCGCAGAAGG+TGG | 0.657684 | 7.3:-9361038 | MS.gene050281:CDS |
| CATGGGTTCATTCACCGTCG+AGG | 0.657749 | 7.3:-9360988 | MS.gene050281:intron |
| GTTACTCTAGAAACTTCCAT+GGG | 0.658204 | 7.3:-9361005 | MS.gene050281:CDS |
| TTACCATCCAAAGAGGGGCA+CGG | 0.666255 | 7.3:+9360152 | None:intergenic |
| ATAAATTACCATCCAAAGAG+GGG | 0.671498 | 7.3:+9360147 | None:intergenic |
| ATATTCGGAAGAGTAAGTCG+GGG | 0.743686 | 7.3:-9359330 | MS.gene050281:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTAACATTTTTTTTTTT+TGG | - | chr7.3:9358539-9358558 | MS.gene050281:intron | 10.0% |
| !! | TTATATATAGTATCTGTAAA+TGG | + | chr7.3:9360217-9360236 | None:intergenic | 15.0% |
| !!! | ATTTTGTCTTAAAATTTAGA+TGG | - | chr7.3:9358697-9358716 | MS.gene050281:intron | 15.0% |
| !!! | GGTCTAAAATTTAAAAATAT+AGG | - | chr7.3:9360440-9360459 | MS.gene050281:intron | 15.0% |
| !!! | TTTTAACTATCATGTTATAA+GGG | - | chr7.3:9360831-9360850 | MS.gene050281:CDS | 15.0% |
| !! | AAAAATGTAAAGATAAAACG+AGG | + | chr7.3:9359582-9359601 | None:intergenic | 20.0% |
| !! | AAATGAAGTTGTTTATTCAA+AGG | - | chr7.3:9359088-9359107 | MS.gene050281:intron | 20.0% |
| !! | AATAAACATATATGCCAAAA+CGG | - | chr7.3:9359831-9359850 | MS.gene050281:intron | 20.0% |
| !! | AATAATAATAATTACCTCGA+CGG | + | chr7.3:9358475-9358494 | None:intergenic | 20.0% |
| !! | AATGAAGTTGTTTATTCAAA+GGG | - | chr7.3:9359089-9359108 | MS.gene050281:intron | 20.0% |
| !! | AATTTCCAAAGTAAAATAGA+AGG | + | chr7.3:9359334-9359353 | None:intergenic | 20.0% |
| !! | ATCATAAAATTGCTAGTATT+GGG | - | chr7.3:9360286-9360305 | MS.gene050281:intron | 20.0% |
| !! | ATGATTAAATAGCAATATAG+AGG | + | chr7.3:9359668-9359687 | None:intergenic | 20.0% |
| !! | TAATCGTGTTATCATAATAT+GGG | - | chr7.3:9358858-9358877 | MS.gene050281:intron | 20.0% |
| !! | TAATGATACTTTGTGATATT+GGG | - | chr7.3:9360262-9360281 | MS.gene050281:CDS | 20.0% |
| !! | TACATTTAAATAAAACACGT+TGG | - | chr7.3:9360499-9360518 | MS.gene050281:intron | 20.0% |
| !! | TGGAAATTATTAATACATGT+TGG | - | chr7.3:9359346-9359365 | MS.gene050281:intron | 20.0% |
| !! | TTAAAACTAGCGTATAATAA+GGG | + | chr7.3:9360817-9360836 | None:intergenic | 20.0% |
| !! | TTAAATAAGCTCTACTTATA+TGG | + | chr7.3:9359441-9359460 | None:intergenic | 20.0% |
| !! | TTAATGATACTTTGTGATAT+TGG | - | chr7.3:9360261-9360280 | MS.gene050281:CDS | 20.0% |
| !! | TTTAAAAATATAGGATCAGA+AGG | - | chr7.3:9360449-9360468 | MS.gene050281:intron | 20.0% |
| !!! | AAGTATCATTAAACTGTTTT+AGG | + | chr7.3:9360253-9360272 | None:intergenic | 20.0% |
| !!! | AATTCATATAGTGAAACTTT+TGG | - | chr7.3:9360047-9360066 | MS.gene050281:intron | 20.0% |
| !!! | CAAATATGTCAATTTTTTCA+AGG | + | chr7.3:9360975-9360994 | None:intergenic | 20.0% |
| !!! | GTGTTGTTTTTTAATTACAT+TGG | - | chr7.3:9358719-9358738 | MS.gene050281:intron | 20.0% |
| !!! | GTTTTAACTATCATGTTATA+AGG | - | chr7.3:9360830-9360849 | MS.gene050281:CDS | 20.0% |
| !!! | TATATGATACTGATAATGTT+GGG | - | chr7.3:9360309-9360328 | MS.gene050281:intron | 20.0% |
| ! | AATAACGAACAATGAAAATG+TGG | + | chr7.3:9358680-9358699 | None:intergenic | 25.0% |
| ! | AATGATACTTTGTGATATTG+GGG | - | chr7.3:9360263-9360282 | MS.gene050281:CDS | 25.0% |
| ! | AATGGAACAAAAAGTAGTTA+TGG | - | chr7.3:9360694-9360713 | MS.gene050281:intron | 25.0% |
| ! | ATGAAGTTGTTTATTCAAAG+GGG | - | chr7.3:9359090-9359109 | MS.gene050281:intron | 25.0% |
| ! | ATGGAACAAAAAGTAGTTAT+GGG | - | chr7.3:9360695-9360714 | MS.gene050281:intron | 25.0% |
| ! | ATGTAAATTGAATATGCACA+AGG | + | chr7.3:9360484-9360503 | None:intergenic | 25.0% |
| ! | CCAAGAAAAAAAGTTCATAA+AGG | + | chr7.3:9360933-9360952 | None:intergenic | 25.0% |
| ! | GATCATAAAATTGCTAGTAT+TGG | - | chr7.3:9360285-9360304 | MS.gene050281:intron | 25.0% |
| ! | GTAATCGTGTTATCATAATA+TGG | - | chr7.3:9358857-9358876 | MS.gene050281:intron | 25.0% |
| ! | GTTAAAACTAGCGTATAATA+AGG | + | chr7.3:9360818-9360837 | None:intergenic | 25.0% |
| ! | TCATTATGTAATGTAATCTG+AGG | - | chr7.3:9359684-9359703 | MS.gene050281:intron | 25.0% |
| ! | TGCTTATAGTAATATGAATG+TGG | - | chr7.3:9359738-9359757 | MS.gene050281:intron | 25.0% |
| ! | TTTCATAAAATTCCATTTCC+TGG | + | chr7.3:9360863-9360882 | None:intergenic | 25.0% |
| !! | ACATGTTCATAAACTGTTTT+CGG | - | chr7.3:9358942-9358961 | MS.gene050281:intron | 25.0% |
| !! | CAATTACAAGCAAAGTTTTT+GGG | - | chr7.3:9360396-9360415 | MS.gene050281:intron | 25.0% |
| !! | GTATATGATACTGATAATGT+TGG | - | chr7.3:9360308-9360327 | MS.gene050281:intron | 25.0% |
| !! | TATCATAATATGGGTTTGTT+TGG | - | chr7.3:9358867-9358886 | MS.gene050281:intron | 25.0% |
| !! | TCAATTACAAGCAAAGTTTT+TGG | - | chr7.3:9360395-9360414 | MS.gene050281:intron | 25.0% |
| !! | TTCTTCCTTCTATTTTACTT+TGG | - | chr7.3:9359326-9359345 | MS.gene050281:CDS | 25.0% |
| !!! | AACTACTTTTTGTTCCATTT+TGG | + | chr7.3:9360693-9360712 | None:intergenic | 25.0% |
| !!! | CCTTTATGAACTTTTTTTCT+TGG | - | chr7.3:9360930-9360949 | MS.gene050281:intron | 25.0% |
| !!! | GAGGATTTTTTTAGATGATT+TGG | + | chr7.3:9359649-9359668 | None:intergenic | 25.0% |
| !!! | TAGATGATTTGGTGATTATA+TGG | + | chr7.3:9359638-9359657 | None:intergenic | 25.0% |
| !!! | TGTTCTATTTCTACTTATTC+AGG | - | chr7.3:9360993-9361012 | MS.gene050281:CDS | 25.0% |
| AAAACCCTAATTCTGTATCA+GGG | + | chr7.3:9358524-9358543 | None:intergenic | 30.0% | |
| AAAGGACCAAATGTATGATT+TGG | - | chr7.3:9360744-9360763 | MS.gene050281:intron | 30.0% | |
| AAATAAAACACGTTGGATCT+AGG | - | chr7.3:9360506-9360525 | MS.gene050281:intron | 30.0% | |
| AAATTTGAACCCAATAAGCA+TGG | + | chr7.3:9359507-9359526 | None:intergenic | 30.0% | |
| AAGGACCAAATGTATGATTT+GGG | - | chr7.3:9360745-9360764 | MS.gene050281:intron | 30.0% | |
| AGATAAATTACCATCCAAAG+AGG | + | chr7.3:9359304-9359323 | None:intergenic | 30.0% | |
| ATAAATTACCATCCAAAGAG+GGG | + | chr7.3:9359302-9359321 | None:intergenic | 30.0% | |
| ATCAACTGACATAAACTGTT+TGG | - | chr7.3:9358908-9358927 | MS.gene050281:intron | 30.0% | |
| ATCATCTGATGCTAATGTTA+TGG | + | chr7.3:9360017-9360036 | None:intergenic | 30.0% | |
| ATCTAGGTTTGGATATATAG+TGG | - | chr7.3:9360522-9360541 | MS.gene050281:intron | 30.0% | |
| ATGGAAATCATCAAAAGACT+TGG | - | chr7.3:9360140-9360159 | MS.gene050281:intron | 30.0% | |
| CCAAAAACAAACCAATAGTT+GGG | + | chr7.3:9359476-9359495 | None:intergenic | 30.0% | |
| CCAAACAAAAATCATCAACA+AGG | + | chr7.3:9359373-9359392 | None:intergenic | 30.0% | |
| GATAAATTACCATCCAAAGA+GGG | + | chr7.3:9359303-9359322 | None:intergenic | 30.0% | |
| GATGCCACAAAATAAGTTAA+AGG | - | chr7.3:9360726-9360745 | MS.gene050281:intron | 30.0% | |
| TAAAACCCTAATTCTGTATC+AGG | + | chr7.3:9358525-9358544 | None:intergenic | 30.0% | |
| TAAACCCTGATACAGAATTA+GGG | - | chr7.3:9358517-9358536 | MS.gene050281:intron | 30.0% | |
| TCAACTGACATAAACTGTTT+GGG | - | chr7.3:9358909-9358928 | MS.gene050281:intron | 30.0% | |
| TCCAAAAACAAACCAATAGT+TGG | + | chr7.3:9359477-9359496 | None:intergenic | 30.0% | |
| TCGTAGTAAGTAACAATTGT+AGG | + | chr7.3:9359963-9359982 | None:intergenic | 30.0% | |
| TGAAGTTGTTTATTCAAAGG+GGG | - | chr7.3:9359091-9359110 | MS.gene050281:intron | 30.0% | |
| TGGATATATAGTGGCTAATT+GGG | - | chr7.3:9360531-9360550 | MS.gene050281:intron | 30.0% | |
| TGTAGGAATGCAAAAAACAA+GGG | - | chr7.3:9359899-9359918 | MS.gene050281:intron | 30.0% | |
| TTAAACCCTGATACAGAATT+AGG | - | chr7.3:9358516-9358535 | MS.gene050281:intron | 30.0% | |
| TTGGATATATAGTGGCTAAT+TGG | - | chr7.3:9360530-9360549 | MS.gene050281:intron | 30.0% | |
| ! | AAAACCGAGATTTTGTGTAA+AGG | - | chr7.3:9360614-9360633 | MS.gene050281:intron | 30.0% |
| ! | ATTTTATCAATGGCTAATGC+TGG | - | chr7.3:9359231-9359250 | MS.gene050281:intron | 30.0% |
| ! | CATTTTTGTATAAGCTGTCT+TGG | + | chr7.3:9358986-9359005 | None:intergenic | 30.0% |
| ! | GTTTCATTGACTAAATCTGT+AGG | - | chr7.3:9359882-9359901 | MS.gene050281:intron | 30.0% |
| ! | TAATATGGGTTTGTTTGGAT+CGG | - | chr7.3:9358872-9358891 | MS.gene050281:intron | 30.0% |
| !! | TTTAGCCACTTTGTTGTTTA+TGG | - | chr7.3:9359153-9359172 | MS.gene050281:intron | 30.0% |
| !!! | ACATTGGTTTTTTGTTGAGT+AGG | - | chr7.3:9358735-9358754 | MS.gene050281:intron | 30.0% |
| !!! | CCTTGTTGATGATTTTTGTT+TGG | - | chr7.3:9359370-9359389 | MS.gene050281:intron | 30.0% |
| !!! | TGGTCCTTTAACTTATTTTG+TGG | + | chr7.3:9360733-9360752 | None:intergenic | 30.0% |
| AAACTAGCGTATAATAAGGG+TGG | + | chr7.3:9360814-9360833 | None:intergenic | 35.0% | |
| AACTGACATAAACTGTTTGG+GGG | - | chr7.3:9358911-9358930 | MS.gene050281:intron | 35.0% | |
| AATATTCGGAAGAGTAAGTC+GGG | - | chr7.3:9360115-9360134 | MS.gene050281:intron | 35.0% | |
| ACCTGTCATTGTTATCTGTT+TGG | + | chr7.3:9360172-9360191 | None:intergenic | 35.0% | |
| ACTCAATTTCTGTTTCAACC+AGG | - | chr7.3:9360083-9360102 | MS.gene050281:intron | 35.0% | |
| AGGATTTCATAGTACAAGGT+GGG | - | chr7.3:9358755-9358774 | MS.gene050281:intron | 35.0% | |
| AGTTAAAGCATACCCATAGA+TGG | + | chr7.3:9358812-9358831 | None:intergenic | 35.0% | |
| ATGAAGTTCCTACAAGTTCT+AGG | + | chr7.3:9358591-9358610 | None:intergenic | 35.0% | |
| CAAAGCCCAAATCATACATT+TGG | + | chr7.3:9360753-9360772 | None:intergenic | 35.0% | |
| CAACTGACATAAACTGTTTG+GGG | - | chr7.3:9358910-9358929 | MS.gene050281:intron | 35.0% | |
| CAATATTCGGAAGAGTAAGT+CGG | - | chr7.3:9360114-9360133 | MS.gene050281:intron | 35.0% | |
| CCAGGAAAACACACAATATT+CGG | - | chr7.3:9360101-9360120 | MS.gene050281:intron | 35.0% | |
| CTGTAGGAATGCAAAAAACA+AGG | - | chr7.3:9359898-9359917 | MS.gene050281:intron | 35.0% | |
| GAATATTGTAACAGTGCATG+AGG | + | chr7.3:9360377-9360396 | None:intergenic | 35.0% | |
| GAATGTGGATGATTATCTCT+GGG | - | chr7.3:9359753-9359772 | MS.gene050281:intron | 35.0% | |
| GAGTAGGATTTCATAGTACA+AGG | - | chr7.3:9358751-9358770 | MS.gene050281:intron | 35.0% | |
| GGCAAACACAATAGATAATC+AGG | - | chr7.3:9359715-9359734 | MS.gene050281:intron | 35.0% | |
| TAAGTCACCCAAAAAAACCT+AGG | + | chr7.3:9359117-9359136 | None:intergenic | 35.0% | |
| TAAGTTCCACAGAATCATCA+AGG | - | chr7.3:9358644-9358663 | MS.gene050281:intron | 35.0% | |
| TAATAAGGGTGGTAAAGTGT+TGG | + | chr7.3:9360803-9360822 | None:intergenic | 35.0% | |
| TAGGATTTCATAGTACAAGG+TGG | - | chr7.3:9358754-9358773 | MS.gene050281:intron | 35.0% | |
| TAGTATCTTCACATCATGGA+CGG | + | chr7.3:9361020-9361039 | None:intergenic | 35.0% | |
| TCCAAACAGATAACAATGAC+AGG | - | chr7.3:9360168-9360187 | MS.gene050281:CDS | 35.0% | |
| TCCATGATGTGAAGATACTA+CGG | - | chr7.3:9361020-9361039 | MS.gene050281:CDS | 35.0% | |
| TGAATGTGGATGATTATCTC+TGG | - | chr7.3:9359752-9359771 | MS.gene050281:intron | 35.0% | |
| TTCATTGAACTATCTCGTAG+AGG | - | chr7.3:9358606-9358625 | MS.gene050281:intron | 35.0% | |
| ! | AACTGACTTCCGTTAGTATT+AGG | + | chr7.3:9359258-9359277 | None:intergenic | 35.0% |
| ! | AATAAGGGTGGTAAAGTGTT+GGG | + | chr7.3:9360802-9360821 | None:intergenic | 35.0% |
| ! | AATTTTAGACCTCGACAGAT+AGG | + | chr7.3:9360431-9360450 | None:intergenic | 35.0% |
| ! | ACTGACTTCCGTTAGTATTA+GGG | + | chr7.3:9359257-9359276 | None:intergenic | 35.0% |
| ! | GTTACTCTAGAAACTTCCAT+GGG | - | chr7.3:9358441-9358460 | MS.gene050281:intron | 35.0% |
| ! | TGAATACCTTGATGATTCTG+TGG | + | chr7.3:9358653-9358672 | None:intergenic | 35.0% |
| ! | TGGAGCTGGTATTTTATCAA+TGG | - | chr7.3:9359221-9359240 | MS.gene050281:intron | 35.0% |
| !! | ACTGTTTTAGGCAAGATTGT+TGG | + | chr7.3:9360241-9360260 | None:intergenic | 35.0% |
| !! | AGTAGTTGATTTGGGTTAGA+AGG | - | chr7.3:9360589-9360608 | MS.gene050281:intron | 35.0% |
| !! | GTAGTTGATTTGGGTTAGAA+GGG | - | chr7.3:9360590-9360609 | MS.gene050281:intron | 35.0% |
| !! | TAGTTGATTTGGGTTAGAAG+GGG | - | chr7.3:9360591-9360610 | MS.gene050281:intron | 35.0% |
| !! | TGATAAGAGTACCCAACTAT+TGG | - | chr7.3:9359462-9359481 | MS.gene050281:intron | 35.0% |
| !!! | CCCAACTATTGGTTTGTTTT+TGG | - | chr7.3:9359473-9359492 | MS.gene050281:intron | 35.0% |
| !!! | CTTATTTTGTGGCATCACTT+TGG | + | chr7.3:9360722-9360741 | None:intergenic | 35.0% |
| AAACACGTTGGATCTAGGTT+TGG | - | chr7.3:9360511-9360530 | MS.gene050281:intron | 40.0% | |
| AATGCTGGCCCTAATACTAA+CGG | - | chr7.3:9359246-9359265 | MS.gene050281:intron | 40.0% | |
| ACCAACTGAGGTAAAGTTAG+GGG | - | chr7.3:9360666-9360685 | MS.gene050281:CDS | 40.0% | |
| AGTATCTTCACATCATGGAC+GGG | + | chr7.3:9361019-9361038 | None:intergenic | 40.0% | |
| ATATTCGGAAGAGTAAGTCG+GGG | - | chr7.3:9360116-9360135 | MS.gene050281:intron | 40.0% | |
| CACTGCCATAAACAACAAAG+TGG | + | chr7.3:9359161-9359180 | None:intergenic | 40.0% | |
| GACAATGCACCATGCTTATT+GGG | - | chr7.3:9359495-9359514 | MS.gene050281:intron | 40.0% | |
| GACCAACTGAGGTAAAGTTA+GGG | - | chr7.3:9360665-9360684 | MS.gene050281:CDS | 40.0% | |
| GGATTTCATAGTACAAGGTG+GGG | - | chr7.3:9358756-9358775 | MS.gene050281:intron | 40.0% | |
| GTAAAGTTAGGGGACCAAAA+TGG | - | chr7.3:9360676-9360695 | MS.gene050281:CDS | 40.0% | |
| GTCGCCTTTACACAAAATCT+CGG | + | chr7.3:9360621-9360640 | None:intergenic | 40.0% | |
| TCCGTAGTATCTTCACATCA+TGG | + | chr7.3:9361024-9361043 | None:intergenic | 40.0% | |
| TCGAAAATGTTGGTCATCTG+AGG | - | chr7.3:9360337-9360356 | MS.gene050281:intron | 40.0% | |
| TGACCAACTGAGGTAAAGTT+AGG | - | chr7.3:9360664-9360683 | MS.gene050281:CDS | 40.0% | |
| TTTGTGTAAAGGCGACAGAT+TGG | - | chr7.3:9360625-9360644 | MS.gene050281:intron | 40.0% | |
| ! | ATGTAATCTGAGGTCACTGA+TGG | - | chr7.3:9359694-9359713 | MS.gene050281:intron | 40.0% |
| ! | CAGCTGTCTAATATCCGTTT+TGG | + | chr7.3:9359848-9359867 | None:intergenic | 40.0% |
| ! | CCGAATATTGTGTGTTTTCC+TGG | + | chr7.3:9360104-9360123 | None:intergenic | 40.0% |
| ! | GGTTACTCTAGAAACTTCCA+TGG | - | chr7.3:9358440-9358459 | MS.gene050281:intron | 40.0% |
| ! | TCAGATGACCAACATTTTCG+AGG | + | chr7.3:9360338-9360357 | None:intergenic | 40.0% |
| !! | ATGTTATAAGGGTGTCTTCC+AGG | - | chr7.3:9360842-9360861 | MS.gene050281:CDS | 40.0% |
| !! | GAAGTTTCTAGAGTAACCTC+CGG | + | chr7.3:9358438-9358457 | None:intergenic | 40.0% |
| AAACAAGAGCTGAAGCACAC+TGG | - | chr7.3:9359201-9359220 | MS.gene050281:intron | 45.0% | |
| AGAGGAGGAGAATCCATCTA+TGG | - | chr7.3:9358796-9358815 | MS.gene050281:intron | 45.0% | |
| AGCATGCACCTAGAACTTGT+AGG | - | chr7.3:9358580-9358599 | MS.gene050281:intron | 45.0% | |
| GAGGAGGAGAATCCATCTAT+GGG | - | chr7.3:9358797-9358816 | MS.gene050281:intron | 45.0% | |
| GATACTACGGACATCAGTCA+AGG | - | chr7.3:9361033-9361052 | MS.gene050281:CDS | 45.0% | |
| GGACAATGCACCATGCTTAT+TGG | - | chr7.3:9359494-9359513 | MS.gene050281:intron | 45.0% | |
| TCCACGCTGAGTAGTTGATT+TGG | - | chr7.3:9360580-9360599 | MS.gene050281:intron | 45.0% | |
| TCCCCTAACTTTACCTCAGT+TGG | + | chr7.3:9360670-9360689 | None:intergenic | 45.0% | |
| TGTAAAGGCGACAGATTGGA+CGG | - | chr7.3:9360629-9360648 | MS.gene050281:intron | 45.0% | |
| TGTTACTCACTTGCATGGTG+AGG | - | chr7.3:9359398-9359417 | MS.gene050281:intron | 45.0% | |
| TGTTTATTCAAAGGGGGCCT+AGG | - | chr7.3:9359097-9359116 | MS.gene050281:intron | 45.0% | |
| TTGGGTGTCCTCGAAAATGT+TGG | - | chr7.3:9360327-9360346 | MS.gene050281:intron | 45.0% | |
| ! | CACTGTGTTACTCACTTGCA+TGG | - | chr7.3:9359393-9359412 | MS.gene050281:intron | 45.0% |
| ! | CCACGCTGAGTAGTTGATTT+GGG | - | chr7.3:9360581-9360600 | MS.gene050281:intron | 45.0% |
| !! | TAAGGGTGTCTTCCAGGAAA+TGG | - | chr7.3:9360848-9360867 | MS.gene050281:CDS | 45.0% |
| !!! | AAAGGGGGCCTAGGTTTTTT+TGG | - | chr7.3:9359106-9359125 | MS.gene050281:intron | 45.0% |
| !!! | AAGGGGGCCTAGGTTTTTTT+GGG | - | chr7.3:9359107-9359126 | MS.gene050281:intron | 45.0% |
| !!! | TTTTAACATTTTTTTTTTTT+GGG | - | chr7.3:9358540-9358559 | MS.gene050281:intron | 5.0% |
| AGGGCTAACTTGACCAACTG+AGG | - | chr7.3:9360654-9360673 | MS.gene050281:CDS | 50.0% | |
| CAACGAAAGCCTATCTGTCG+AGG | - | chr7.3:9360419-9360438 | MS.gene050281:intron | 50.0% | |
| CCCAAATCAACTACTCAGCG+TGG | + | chr7.3:9360584-9360603 | None:intergenic | 50.0% | |
| TTACCATCCAAAGAGGGGCA+CGG | + | chr7.3:9359297-9359316 | None:intergenic | 50.0% | |
| AGGCGACAGATTGGACGGAA+AGG | - | chr7.3:9360634-9360653 | MS.gene050281:intron | 55.0% | |
| CATGGGTTCATTCACCGTCG+AGG | - | chr7.3:9358458-9358477 | MS.gene050281:intron | 55.0% | |
| CGGAAGAGTAAGTCGGGGAA+TGG | - | chr7.3:9360121-9360140 | MS.gene050281:intron | 55.0% | |
| CTCGACGGTGAATGAACCCA+TGG | + | chr7.3:9358460-9358479 | None:intergenic | 55.0% | |
| GGCGACAGATTGGACGGAAA+GGG | - | chr7.3:9360635-9360654 | MS.gene050281:intron | 55.0% | |
| TACAAGGTGGGGATCCCACT+GGG | - | chr7.3:9358767-9358786 | MS.gene050281:intron | 55.0% | |
| AAGCGCAGAAGGTGGTGCTC+CGG | - | chr7.3:9358416-9358435 | MS.gene050281:CDS | 60.0% | |
| ATGTGGGCAAGCGCAGAAGG+TGG | - | chr7.3:9358408-9358427 | MS.gene050281:CDS | 60.0% | |
| CCTCCTCTTCCTGTCCCAGT+GGG | + | chr7.3:9358784-9358803 | None:intergenic | 60.0% | |
| GAGCTGAAGCACACTGGAGC+TGG | - | chr7.3:9359207-9359226 | MS.gene050281:intron | 60.0% | |
| GATCCCACTGGGACAGGAAG+AGG | - | chr7.3:9358778-9358797 | MS.gene050281:intron | 60.0% | |
| GTACAAGGTGGGGATCCCAC+TGG | - | chr7.3:9358766-9358785 | MS.gene050281:intron | 60.0% | |
| TCCTCCTCTTCCTGTCCCAG+TGG | + | chr7.3:9358785-9358804 | None:intergenic | 60.0% | |
| CCCACTGGGACAGGAAGAGG+AGG | - | chr7.3:9358781-9358800 | MS.gene050281:intron | 65.0% | |
| GCACCGTGCCCCTCTTTGGA+TGG | - | chr7.3:9359291-9359310 | MS.gene050281:CDS | 65.0% | |
| TCTCGCACCGTGCCCCTCTT+TGG | - | chr7.3:9359287-9359306 | MS.gene050281:CDS | 65.0% | |
| CGCAGAAGGTGGTGCTCCGG+AGG | - | chr7.3:9358419-9358438 | MS.gene050281:CDS | 70.0% | |
| GGTGGGGATCCCACTGGGAC+AGG | - | chr7.3:9358772-9358791 | MS.gene050281:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 9358408 | 9361060 | 9358408 | ID=MS.gene050281 |
| chr7.3 | mRNA | 9358408 | 9361060 | 9358408 | ID=MS.gene050281.t1;Parent=MS.gene050281 |
| chr7.3 | exon | 9360989 | 9361060 | 9360989 | ID=MS.gene050281.t1.exon1;Parent=MS.gene050281.t1 |
| chr7.3 | CDS | 9360989 | 9361060 | 9360989 | ID=cds.MS.gene050281.t1;Parent=MS.gene050281.t1 |
| chr7.3 | exon | 9360803 | 9360898 | 9360803 | ID=MS.gene050281.t1.exon2;Parent=MS.gene050281.t1 |
| chr7.3 | CDS | 9360803 | 9360898 | 9360803 | ID=cds.MS.gene050281.t1;Parent=MS.gene050281.t1 |
| chr7.3 | exon | 9360650 | 9360711 | 9360650 | ID=MS.gene050281.t1.exon3;Parent=MS.gene050281.t1 |
| chr7.3 | CDS | 9360650 | 9360711 | 9360650 | ID=cds.MS.gene050281.t1;Parent=MS.gene050281.t1 |
| chr7.3 | exon | 9360156 | 9360289 | 9360156 | ID=MS.gene050281.t1.exon4;Parent=MS.gene050281.t1 |
| chr7.3 | CDS | 9360156 | 9360289 | 9360156 | ID=cds.MS.gene050281.t1;Parent=MS.gene050281.t1 |
| chr7.3 | exon | 9359279 | 9359363 | 9359279 | ID=MS.gene050281.t1.exon5;Parent=MS.gene050281.t1 |
| chr7.3 | CDS | 9359279 | 9359363 | 9359279 | ID=cds.MS.gene050281.t1;Parent=MS.gene050281.t1 |
| chr7.3 | exon | 9358408 | 9358453 | 9358408 | ID=MS.gene050281.t1.exon6;Parent=MS.gene050281.t1 |
| chr7.3 | CDS | 9358408 | 9358453 | 9358408 | ID=cds.MS.gene050281.t1;Parent=MS.gene050281.t1 |
| Gene Sequence |
| Protein sequence |
