AlfalfaGEDB | MS.gene68153

M. sativa cultivar XinJiangDaYe / MS.gene68153

KEGG: K01802
GO: GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564
PFAM: PF00160.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68153.t1	XP_003604030.1	93.7	191	9	2	1	188	1	191	3.50E-96	360.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68153.t1	Q8W171	85.4	171	25	0	8	178	2	172	4.9e-86	318.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68153.t1	G7J8H2	93.7	191	9	2	1	188	1	191	2.6e-96	360.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049232	MS.gene68153	0.805163	1.52E-49	-1.69E-46
MS.gene049320	MS.gene68153	0.801404	9.15E-49	-1.69E-46
MS.gene05010	MS.gene68153	0.800978	1.12E-48	-1.69E-46
MS.gene050504	MS.gene68153	0.811173	7.99E-51	-1.69E-46
MS.gene050518	MS.gene68153	0.830539	2.77E-55	-1.69E-46
MS.gene050612	MS.gene68153	0.811825	5.77E-51	-1.69E-46
MS.gene050876	MS.gene68153	0.823577	1.29E-53	-1.69E-46
MS.gene05087	MS.gene68153	0.802922	4.46E-49	-1.69E-46
MS.gene050986	MS.gene68153	0.824198	9.19E-54	-1.69E-46
MS.gene054954	MS.gene68153	0.800505	1.40E-48	-1.69E-46
MS.gene055634	MS.gene68153	0.841277	5.24E-58	-1.69E-46
MS.gene055776	MS.gene68153	0.842098	3.18E-58	-1.69E-46
MS.gene055849	MS.gene68153	0.820682	6.03E-53	-1.69E-46
MS.gene056510	MS.gene68153	0.818007	2.45E-52	-1.69E-46
MS.gene057765	MS.gene68153	0.804552	2.05E-49	-1.69E-46
MS.gene057872	MS.gene68153	0.805261	1.45E-49	-1.69E-46
MS.gene058719	MS.gene68153	0.826774	2.26E-54	-1.69E-46
MS.gene059022	MS.gene68153	0.801273	9.73E-49	-1.69E-46
MS.gene059865	MS.gene68153	0.804495	2.10E-49	-1.69E-46
MS.gene060703	MS.gene68153	0.814019	1.91E-51	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene68153	MS.gene048458	PPI
MS.gene68153	MS.gene04515	PPI
MS.gene68153	MS.gene074045	PPI
MS.gene68153	MS.gene052266	PPI
MS.gene025980	MS.gene68153	PPI
MS.gene68153	MS.gene04526	PPI
MS.gene68153	MS.gene050574	PPI
MS.gene68153	MS.gene050281	PPI
MS.gene68153	MS.gene83474	PPI
MS.gene68153	MS.gene28703	PPI
MS.gene68153	MS.gene052269	PPI
MS.gene68153	MS.gene68752	PPI
MS.gene68153	MS.gene019366	PPI
MS.gene68153	MS.gene72809	PPI
MS.gene68153	MS.gene28963	PPI
MS.gene68153	MS.gene23663	PPI
MS.gene68153	MS.gene47195	PPI
MS.gene68153	MS.gene063787	PPI
MS.gene68153	MS.gene007179	PPI
MS.gene68153	MS.gene61767	PPI
MS.gene68153	MS.gene82121	PPI
MS.gene68153	MS.gene23546	PPI
MS.gene68153	MS.gene025980	PPI
MS.gene68153	MS.gene028111	PPI
MS.gene68153	MS.gene014216	PPI
MS.gene68153	MS.gene024514	PPI
MS.gene68153	MS.gene063104	PPI
MS.gene68752	MS.gene68153	PPI
MS.gene88451	MS.gene68153	PPI
MS.gene68153	MS.gene051153	PPI
MS.gene68153	MS.gene88451	PPI
MS.gene68153	MS.gene55545	PPI
MS.gene68153	MS.gene39668	PPI
MS.gene39668	MS.gene68153	PPI
MS.gene68153	MS.gene22872	PPI
MS.gene68153	MS.gene003412	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68153.t1	MTR_3g117750	97.861	187	3	1	3	188	5	191	2.08e-133	371
MS.gene68153.t1	MTR_4g075290	86.471	170	23	0	9	178	3	172	1.12e-109	310
MS.gene68153.t1	MTR_7g116340	76.471	170	40	0	9	178	3	172	4.75e-97	278
MS.gene68153.t1	MTR_3g463900	67.665	167	54	0	11	177	35	201	1.79e-79	235
MS.gene68153.t1	MTR_3g070500	62.921	178	66	0	1	178	55	232	4.38e-79	235
MS.gene68153.t1	MTR_7g095750	63.743	171	61	1	9	178	6	176	9.26e-75	236
MS.gene68153.t1	MTR_8g079690	58.757	177	71	2	8	182	2	178	8.20e-68	211
MS.gene68153.t1	MTR_1g117010	60.819	171	56	3	11	177	78	241	2.39e-67	206
MS.gene68153.t1	MTR_1g117010	60.819	171	56	3	11	177	78	241	2.39e-67	206
MS.gene68153.t1	MTR_8g040180	58.857	175	67	4	6	177	13	185	2.18e-66	201
MS.gene68153.t1	MTR_1g085560	66.438	146	42	1	11	156	86	224	3.76e-66	203
MS.gene68153.t1	MTR_7g110980	58.523	176	55	3	11	180	97	260	7.89e-66	202
MS.gene68153.t1	MTR_4g086760	57.386	176	69	3	11	182	5	178	9.47e-64	199
MS.gene68153.t1	MTR_4g086760	57.386	176	69	3	11	182	5	178	1.79e-63	200
MS.gene68153.t1	MTR_4g086760	57.386	176	69	3	11	182	5	178	1.85e-63	199
MS.gene68153.t1	MTR_3g070500	65.672	134	46	0	1	134	55	188	6.69e-61	187
MS.gene68153.t1	MTR_4g073650	53.757	173	79	1	6	177	42	214	1.46e-60	188
MS.gene68153.t1	MTR_3g107660	51.445	173	83	1	9	180	9	181	7.78e-52	178
MS.gene68153.t1	MTR_3g070500	64.220	109	39	0	1	109	55	163	4.24e-46	149
MS.gene68153.t1	MTR_3g070500	63.889	108	39	0	1	108	55	162	7.85e-46	149
MS.gene68153.t1	MTR_1g011980	48.555	173	87	2	9	180	6	177	2.96e-44	156
MS.gene68153.t1	MTR_2g085075	52.027	148	55	5	23	168	470	603	2.81e-35	130
MS.gene68153.t1	MTR_7g105220	50.360	139	53	4	23	158	18	143	5.32e-35	121
MS.gene68153.t1	MTR_8g036015	48.611	144	58	5	23	163	9	139	4.11e-33	116
MS.gene68153.t1	MTR_3g085705	50.877	114	51	3	43	156	7	115	1.79e-29	105
MS.gene68153.t1	MTR_5g015500	48.529	136	58	4	24	158	314	438	1.94e-28	110
MS.gene68153.t1	MTR_5g015500	48.529	136	58	4	24	158	354	478	3.31e-28	110
MS.gene68153.t1	MTR_6g084140	38.824	170	83	6	23	182	9	167	1.13e-22	94.7
MS.gene68153.t1	MTR_6g084140	38.824	170	83	6	23	182	26	184	1.19e-22	94.7
MS.gene68153.t1	MTR_8g442420	38.235	170	84	6	23	182	9	167	1.36e-21	91.7
MS.gene68153.t1	MTR_2g023120	42.742	124	58	5	24	145	22	134	9.12e-18	80.5
MS.gene68153.t1	MTR_1g094065	35.897	156	66	7	24	170	89	219	3.17e-14	68.6
MS.gene68153.t1	MTR_1g035360	29.299	157	93	5	24	177	88	229	1.95e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68153.t1	AT2G16600	83.529	170	28	0	9	178	4	173	6.22e-106	301
MS.gene68153.t1	AT4G38740	80.473	169	33	0	10	178	4	172	2.44e-101	290
MS.gene68153.t1	AT2G21130	78.824	170	36	0	9	178	4	173	2.06e-100	287
MS.gene68153.t1	AT4G34870	79.412	170	35	0	9	178	3	172	1.52e-99	285
MS.gene68153.t1	AT3G56070	72.515	171	47	0	9	179	3	173	1.45e-90	262
MS.gene68153.t1	AT3G56070	72.515	171	47	0	9	179	3	173	1.45e-90	262
MS.gene68153.t1	AT2G16600	71.765	170	26	1	9	178	4	151	7.67e-84	244
MS.gene68153.t1	AT2G29960	67.066	167	55	0	11	177	33	199	1.58e-78	233
MS.gene68153.t1	AT2G29960	67.066	167	55	0	11	177	33	199	1.58e-78	233
MS.gene68153.t1	AT3G63400	66.667	171	56	1	9	178	6	176	8.82e-77	235
MS.gene68153.t1	AT5G58710	65.868	167	57	0	11	177	36	202	1.56e-76	228
MS.gene68153.t1	AT3G63400	66.667	171	56	1	9	178	6	176	4.76e-75	235
MS.gene68153.t1	AT3G63400	66.667	171	56	1	9	178	6	176	4.76e-75	235
MS.gene68153.t1	AT3G63400	66.667	171	56	1	9	178	6	176	4.76e-75	235
MS.gene68153.t1	AT5G13120	62.983	181	56	3	1	177	77	250	2.60e-74	224
MS.gene68153.t1	AT5G13120	62.983	181	56	3	1	177	81	254	4.62e-74	224
MS.gene68153.t1	AT3G55920	61.905	168	64	0	11	178	60	227	3.25e-73	220
MS.gene68153.t1	AT2G29960	62.275	167	53	1	11	177	33	189	2.07e-69	209
MS.gene68153.t1	AT3G62030	58.989	178	65	2	4	180	88	258	8.05e-69	210
MS.gene68153.t1	AT3G62030	58.989	178	65	2	4	180	89	259	8.96e-69	210
MS.gene68153.t1	AT3G62030	58.989	178	65	2	4	180	142	312	3.61e-68	210
MS.gene68153.t1	AT2G15790	60.920	174	66	2	11	182	5	178	5.58e-65	204
MS.gene68153.t1	AT2G38730	58.857	175	67	4	6	177	27	199	6.91e-65	198
MS.gene68153.t1	AT4G34960	54.070	172	78	1	11	181	48	219	2.00e-60	188
MS.gene68153.t1	AT3G22920	53.143	175	70	5	9	179	3	169	5.91e-54	171
MS.gene68153.t1	AT4G34960	55.645	124	55	0	11	134	48	171	8.60e-46	149
MS.gene68153.t1	AT4G32420	47.929	169	87	1	9	176	6	174	9.86e-46	160
MS.gene68153.t1	AT4G32420	47.929	169	87	1	9	176	6	174	9.86e-46	160
MS.gene68153.t1	AT4G32420	47.929	169	87	1	9	176	6	174	9.86e-46	160
MS.gene68153.t1	AT4G32420	47.929	169	87	1	9	176	6	174	9.86e-46	160
MS.gene68153.t1	AT4G32420	48.408	157	80	1	9	164	6	162	2.30e-42	151
MS.gene68153.t1	AT2G36130	48.649	148	62	5	23	169	18	152	1.76e-36	125
MS.gene68153.t1	AT3G44600	51.429	140	54	4	23	160	484	611	6.44e-34	126
MS.gene68153.t1	AT1G01940	48.252	143	60	5	23	163	9	139	7.07e-33	115
MS.gene68153.t1	AT5G67530	45.806	155	65	6	7	158	339	477	7.00e-28	109
MS.gene68153.t1	AT4G33060	45.600	125	55	5	24	146	22	135	1.18e-24	100
MS.gene68153.t1	AT1G53720	38.028	142	68	5	23	155	9	139	1.26e-20	87.8
MS.gene68153.t1	AT1G53720	38.028	142	68	5	23	155	9	139	2.14e-20	88.2

Find 83 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAATTCTCGTCGGCGAATT+TGG	0.117790	3.1:-92652191	None:intergenic
TGGGATTGGGGTTGGGGATG+GGG	0.189257	3.1:-92651919	None:intergenic
TTGGGATTGGGGTTGGGGAT+GGG	0.254630	3.1:-92651920	None:intergenic
AGACTTTGGGATTGGGGTTG+GGG	0.279401	3.1:-92651925	None:intergenic
AAGACTTTGGGATTGGGGTT+GGG	0.281079	3.1:-92651926	None:intergenic
GAGAAAGTTGGGTCCGGTTC+GGG	0.294795	3.1:+92652376	MS.gene68153:CDS
TTTGGGATTGGGGTTGGGGA+TGG	0.340234	3.1:-92651921	None:intergenic
CTCTCCACCGGTACCATTAC+CGG	0.380312	3.1:-92652155	None:intergenic
GGCGAATTTGGACCCGTAGA+TGG	0.381308	3.1:-92652179	None:intergenic
TCGAAGAAGACTTTGGGATT+GGG	0.389727	3.1:-92651932	None:intergenic
GAAGACTTTGGGATTGGGGT+TGG	0.396057	3.1:-92651927	None:intergenic
TGAGAAAGTTGGGTCCGGTT+CGG	0.405741	3.1:+92652375	MS.gene68153:CDS
GTGAAAGAGATTGAGAAAGT+TGG	0.416986	3.1:+92652364	MS.gene68153:CDS
ATGGTAGCTATATATGTTGT+TGG	0.423422	3.1:-92652462	None:intergenic
GTCGAAGAAGACTTTGGGAT+TGG	0.424528	3.1:-92651933	None:intergenic
GTCATGTCGAAGAAGACTTT+GGG	0.428350	3.1:-92651938	None:intergenic
GCAGAGTGCACGGAAGTTAT+CGG	0.432521	3.1:-92652026	None:intergenic
TGGTGAGGTGGTTGAAGGAA+TGG	0.433417	3.1:+92652336	MS.gene68153:CDS
GCGAAGACGGAGTGGCTTGA+TGG	0.435031	3.1:+92652298	MS.gene68153:CDS
CGAAGAAGACTTTGGGATTG+GGG	0.456798	3.1:-92651931	None:intergenic
CCTCCTTGACACATGAAATC+AGG	0.460761	3.1:-92652121	None:intergenic
GGTCATGTCGAAGAAGACTT+TGG	0.463837	3.1:-92651939	None:intergenic
GCACTCTGCACCGGGGAGAA+AGG	0.471854	3.1:+92652040	MS.gene68153:CDS
ACCGGTGGAGAGTCCATCTA+CGG	0.473790	3.1:+92652166	MS.gene68153:CDS
AACTTCCGTGCACTCTGCAC+CGG	0.478449	3.1:+92652031	MS.gene68153:CDS
AGGTCCAGGTGTTCTTTCAA+TGG	0.486279	3.1:+92652228	MS.gene68153:CDS
CTTCATATGCACGGCGAAGA+CGG	0.491522	3.1:+92652285	MS.gene68153:CDS
TGAAAGAGATTGAGAAAGTT+GGG	0.494450	3.1:+92652365	MS.gene68153:CDS
GTTCTTTCAATGGCGAATGC+GGG	0.507071	3.1:+92652238	MS.gene68153:CDS
CGAAGACGGAGTGGCTTGAT+GGG	0.510239	3.1:+92652299	MS.gene68153:CDS
GGTGACTTCACCGCCGGTAA+TGG	0.512626	3.1:+92652142	MS.gene68153:CDS
GATCATTATCATCAGAGAGT+TGG	0.513860	3.1:-92652435	None:intergenic
ATCAAGACCCACACAGGTCC+AGG	0.524358	3.1:+92652214	MS.gene68153:CDS
CATGACCGTCGGAGACGAAC+CGG	0.524784	3.1:+92651955	MS.gene68153:CDS
ACTTCCGTGCACTCTGCACC+GGG	0.526298	3.1:+92652032	MS.gene68153:CDS
GGAAGATAGAGCCTTTGTAA+TGG	0.527764	3.1:-92652087	None:intergenic
GAGATTGAGAAAGTTGGGTC+CGG	0.536951	3.1:+92652370	MS.gene68153:CDS
TTCGCCATTGAAAGAACACC+TGG	0.544494	3.1:-92652232	None:intergenic
TCTCCCCGGTGCAGAGTGCA+CGG	0.546941	3.1:-92652036	None:intergenic
GAACTGTGATCCATTCGTAC+CGG	0.549331	3.1:-92652263	None:intergenic
AACTGTGATCCATTCGTACC+GGG	0.549830	3.1:-92652262	None:intergenic
AATGCGGGACCCGGTACGAA+TGG	0.554826	3.1:+92652253	MS.gene68153:CDS
TGTTCTTTCAATGGCGAATG+CGG	0.558234	3.1:+92652237	MS.gene68153:CDS
TTCACCGCCGGTAATGGTAC+CGG	0.561434	3.1:+92652148	MS.gene68153:CDS
GTCTTCTTCGACATGACCGT+CGG	0.574777	3.1:+92651944	MS.gene68153:CDS
GGCGGTGAGAGGAGTGGTGT+CGG	0.577204	3.1:-92652005	None:intergenic
TCAATGGCGAATGCGGGACC+CGG	0.581965	3.1:+92652244	MS.gene68153:CDS
TCCGACCGGTTCGTCTCCGA+CGG	0.586188	3.1:-92651960	None:intergenic
GGTGGTTGAAGGAATGGAGG+TGG	0.586389	3.1:+92652342	MS.gene68153:CDS
CCGCAGTCAGCAATAACCAC+CGG	0.587692	3.1:-92652412	None:intergenic
TTCGGGGAAAACATCAAAGC+CGG	0.592489	3.1:+92652393	MS.gene68153:CDS
ACCGGTCGGACGTATCGTCA+TGG	0.600041	3.1:+92651973	MS.gene68153:CDS
CGGAAGTTATCGGCGGTGAG+AGG	0.605286	3.1:-92652016	None:intergenic
AGAAAGTTGGGTCCGGTTCG+GGG	0.607170	3.1:+92652377	MS.gene68153:CDS
ATAGAGCCTTTGTAATGGAG+AGG	0.607462	3.1:-92652082	None:intergenic
CCCGTAGATGGACTCTCCAC+CGG	0.607666	3.1:-92652167	None:intergenic
GCTACCGAGTCCTTTCTCCC+CGG	0.607787	3.1:-92652050	None:intergenic
ATACCTGATTTCATGTGTCA+AGG	0.608102	3.1:+92652118	MS.gene68153:CDS
ATCACAGTTCTTCATATGCA+CGG	0.610600	3.1:+92652276	MS.gene68153:CDS
TGAGGTGGTTGAAGGAATGG+AGG	0.611761	3.1:+92652339	MS.gene68153:CDS
GAGAAAGGACTCGGTAGCAG+TGG	0.612151	3.1:+92652055	MS.gene68153:CDS
CAAGGAGGTGACTTCACCGC+CGG	0.614495	3.1:+92652136	MS.gene68153:CDS
ACCGCCGGTAATGGTACCGG+TGG	0.624217	3.1:+92652151	MS.gene68153:CDS
CCGGTGGAGAGTCCATCTAC+GGG	0.638547	3.1:+92652167	MS.gene68153:CDS
AAGAACACCTGGACCTGTGT+GGG	0.644240	3.1:-92652221	None:intergenic
TCCATGACGATACGTCCGAC+CGG	0.645610	3.1:-92651974	None:intergenic
AATTTCATCAAGACCCACAC+AGG	0.645692	3.1:+92652208	MS.gene68153:CDS
GGCAAGCCTCTCCATTACAA+AGG	0.646729	3.1:+92652076	MS.gene68153:CDS
TGCACCGGGGAGAAAGGACT+CGG	0.648211	3.1:+92652046	MS.gene68153:CDS
GGTCTTGATGAAATTCTCGT+CGG	0.653249	3.1:-92652200	None:intergenic
CCTGATTTCATGTGTCAAGG+AGG	0.663642	3.1:+92652121	MS.gene68153:CDS
GTTATCGGCGGTGAGAGGAG+TGG	0.666243	3.1:-92652011	None:intergenic
TATGCACGGCGAAGACGGAG+TGG	0.669618	3.1:+92652290	MS.gene68153:CDS
TGAAATCAGGTATGACGCGG+TGG	0.671849	3.1:-92652108	None:intergenic
GGGGAAAACATCAAAGCCGG+TGG	0.686265	3.1:+92652396	MS.gene68153:CDS
CCGGTGGTTATTGCTGACTG+CGG	0.692364	3.1:+92652412	MS.gene68153:CDS
GTGGCTTGATGGGAAACATG+TGG	0.698636	3.1:+92652309	MS.gene68153:CDS
ACCGTCGGAGACGAACCGGT+CGG	0.705667	3.1:+92651959	MS.gene68153:CDS
TCCACCGGTACCATTACCGG+CGG	0.707753	3.1:-92652152	None:intergenic
AAAGAACACCTGGACCTGTG+TGG	0.718700	3.1:-92652222	None:intergenic
ACATGAAATCAGGTATGACG+CGG	0.735409	3.1:-92652111	None:intergenic
GAGTGCACGGAAGTTATCGG+CGG	0.736092	3.1:-92652023	None:intergenic
CTTCCGTGCACTCTGCACCG+GGG	0.766706	3.1:+92652033	MS.gene68153:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	TGAAAGAGATTGAGAAAGTT+GGG	+	chr3.1:92652365-92652384	MS.gene68153:CDS	30.0%
	ATACCTGATTTCATGTGTCA+AGG	+	chr3.1:92652118-92652137	MS.gene68153:CDS	35.0%
	ATCACAGTTCTTCATATGCA+CGG	+	chr3.1:92652276-92652295	MS.gene68153:CDS	35.0%
	GATCATTATCATCAGAGAGT+TGG	-	chr3.1:92652438-92652457	None:intergenic	35.0%
	GTGAAAGAGATTGAGAAAGT+TGG	+	chr3.1:92652364-92652383	MS.gene68153:CDS	35.0%
	AATTTCATCAAGACCCACAC+AGG	+	chr3.1:92652208-92652227	MS.gene68153:CDS	40.0%
	ACATGAAATCAGGTATGACG+CGG	-	chr3.1:92652114-92652133	None:intergenic	40.0%
	GGAAGATAGAGCCTTTGTAA+TGG	-	chr3.1:92652090-92652109	None:intergenic	40.0%
	GGTCTTGATGAAATTCTCGT+CGG	-	chr3.1:92652203-92652222	None:intergenic	40.0%
	GTCATGTCGAAGAAGACTTT+GGG	-	chr3.1:92651941-92651960	None:intergenic	40.0%
	TGTTCTTTCAATGGCGAATG+CGG	+	chr3.1:92652237-92652256	MS.gene68153:CDS	40.0%
!	ATAGAGCCTTTGTAATGGAG+AGG	-	chr3.1:92652085-92652104	None:intergenic	40.0%
!	GATGGGAAACATGTGGTTTT+TGG	+	chr3.1:92652316-92652335	MS.gene68153:CDS	40.0%
!!	TCGAAGAAGACTTTGGGATT+GGG	-	chr3.1:92651935-92651954	None:intergenic	40.0%
!!!	GAAACATGTGGTTTTTGGTG+AGG	+	chr3.1:92652321-92652340	MS.gene68153:CDS	40.0%
	AACTGTGATCCATTCGTACC+GGG	-	chr3.1:92652265-92652284	None:intergenic	45.0%
	AGGTCCAGGTGTTCTTTCAA+TGG	+	chr3.1:92652228-92652247	MS.gene68153:CDS	45.0%
	CCTCCTTGACACATGAAATC+AGG	-	chr3.1:92652124-92652143	None:intergenic	45.0%
	CCTGATTTCATGTGTCAAGG+AGG	+	chr3.1:92652121-92652140	MS.gene68153:CDS	45.0%
	GAAATTCTCGTCGGCGAATT+TGG	-	chr3.1:92652194-92652213	None:intergenic	45.0%
	GAACTGTGATCCATTCGTAC+CGG	-	chr3.1:92652266-92652285	None:intergenic	45.0%
	GAGATTGAGAAAGTTGGGTC+CGG	+	chr3.1:92652370-92652389	MS.gene68153:CDS	45.0%
	GGTCATGTCGAAGAAGACTT+TGG	-	chr3.1:92651942-92651961	None:intergenic	45.0%
	GTTCTTTCAATGGCGAATGC+GGG	+	chr3.1:92652238-92652257	MS.gene68153:CDS	45.0%
	TTCGCCATTGAAAGAACACC+TGG	-	chr3.1:92652235-92652254	None:intergenic	45.0%
	TTCGGGGAAAACATCAAAGC+CGG	+	chr3.1:92652393-92652412	MS.gene68153:CDS	45.0%
!	CTTTGATGTTTTCCCCGAAC+CGG	-	chr3.1:92652392-92652411	None:intergenic	45.0%
!!	AAGACTTTGGGATTGGGGTT+GGG	-	chr3.1:92651929-92651948	None:intergenic	45.0%
!!	CGAAGAAGACTTTGGGATTG+GGG	-	chr3.1:92651934-92651953	None:intergenic	45.0%
!!	GTCGAAGAAGACTTTGGGAT+TGG	-	chr3.1:92651936-92651955	None:intergenic	45.0%
!!!	ACATGTGGTTTTTGGTGAGG+TGG	+	chr3.1:92652324-92652343	MS.gene68153:CDS	45.0%
!!!	GTTTTTGGTGAGGTGGTTGA+AGG	+	chr3.1:92652331-92652350	MS.gene68153:CDS	45.0%
	AAAGAACACCTGGACCTGTG+TGG	-	chr3.1:92652225-92652244	None:intergenic	50.0%
	AAGAACACCTGGACCTGTGT+GGG	-	chr3.1:92652224-92652243	None:intergenic	50.0%
	CTTCATATGCACGGCGAAGA+CGG	+	chr3.1:92652285-92652304	MS.gene68153:CDS	50.0%
	GCAGAGTGCACGGAAGTTAT+CGG	-	chr3.1:92652029-92652048	None:intergenic	50.0%
	GGCAAGCCTCTCCATTACAA+AGG	+	chr3.1:92652076-92652095	MS.gene68153:CDS	50.0%
	GTCTTCTTCGACATGACCGT+CGG	+	chr3.1:92651944-92651963	MS.gene68153:CDS	50.0%
	GTGGCTTGATGGGAAACATG+TGG	+	chr3.1:92652309-92652328	MS.gene68153:CDS	50.0%
	TGAAATCAGGTATGACGCGG+TGG	-	chr3.1:92652111-92652130	None:intergenic	50.0%
	TGAGAAAGTTGGGTCCGGTT+CGG	+	chr3.1:92652375-92652394	MS.gene68153:CDS	50.0%
	TGAGGTGGTTGAAGGAATGG+AGG	+	chr3.1:92652339-92652358	MS.gene68153:CDS	50.0%
	TGGTGAGGTGGTTGAAGGAA+TGG	+	chr3.1:92652336-92652355	MS.gene68153:CDS	50.0%
!!	AGACTTTGGGATTGGGGTTG+GGG	-	chr3.1:92651928-92651947	None:intergenic	50.0%
!!	GAAGACTTTGGGATTGGGGT+TGG	-	chr3.1:92651930-92651949	None:intergenic	50.0%
	AACTTCCGTGCACTCTGCAC+CGG	+	chr3.1:92652031-92652050	MS.gene68153:CDS	55.0%
	ACCGGTGGAGAGTCCATCTA+CGG	+	chr3.1:92652166-92652185	MS.gene68153:CDS	55.0%
	ATCAAGACCCACACAGGTCC+AGG	+	chr3.1:92652214-92652233	MS.gene68153:CDS	55.0%
	CCGCAGTCAGCAATAACCAC+CGG	-	chr3.1:92652415-92652434	None:intergenic	55.0%
	CGAAGACGGAGTGGCTTGAT+GGG	+	chr3.1:92652299-92652318	MS.gene68153:CDS	55.0%
	CTCTCCACCGGTACCATTAC+CGG	-	chr3.1:92652158-92652177	None:intergenic	55.0%
	GAGAAAGTTGGGTCCGGTTC+GGG	+	chr3.1:92652376-92652395	MS.gene68153:CDS	55.0%
	GAGTGCACGGAAGTTATCGG+CGG	-	chr3.1:92652026-92652045	None:intergenic	55.0%
	GGCGAATTTGGACCCGTAGA+TGG	-	chr3.1:92652182-92652201	None:intergenic	55.0%
	GGGGAAAACATCAAAGCCGG+TGG	+	chr3.1:92652396-92652415	MS.gene68153:CDS	55.0%
	GGTGGTTGAAGGAATGGAGG+TGG	+	chr3.1:92652342-92652361	MS.gene68153:CDS	55.0%
	TCCATGACGATACGTCCGAC+CGG	-	chr3.1:92651977-92651996	None:intergenic	55.0%
	TTGGGATTGGGGTTGGGGAT+GGG	-	chr3.1:92651923-92651942	None:intergenic	55.0%
!	AGAAAGTTGGGTCCGGTTCG+GGG	+	chr3.1:92652377-92652396	MS.gene68153:CDS	55.0%
!	CCGGTGGTTATTGCTGACTG+CGG	+	chr3.1:92652412-92652431	MS.gene68153:CDS	55.0%
!	GAGAAAGGACTCGGTAGCAG+TGG	+	chr3.1:92652055-92652074	MS.gene68153:CDS	55.0%
!	TTCACCGCCGGTAATGGTAC+CGG	+	chr3.1:92652148-92652167	MS.gene68153:CDS	55.0%
!	TTTGGGATTGGGGTTGGGGA+TGG	-	chr3.1:92651924-92651943	None:intergenic	55.0%
	AATGCGGGACCCGGTACGAA+TGG	+	chr3.1:92652253-92652272	MS.gene68153:CDS	60.0%
	ACCGGTCGGACGTATCGTCA+TGG	+	chr3.1:92651973-92651992	MS.gene68153:CDS	60.0%
	ACTTCCGTGCACTCTGCACC+GGG	+	chr3.1:92652032-92652051	MS.gene68153:CDS	60.0%
	CAAGGAGGTGACTTCACCGC+CGG	+	chr3.1:92652136-92652155	MS.gene68153:CDS	60.0%
	CATGACCGTCGGAGACGAAC+CGG	+	chr3.1:92651955-92651974	MS.gene68153:CDS	60.0%
	CCGGTGGAGAGTCCATCTAC+GGG	+	chr3.1:92652167-92652186	MS.gene68153:CDS	60.0%
	CGGAAGTTATCGGCGGTGAG+AGG	-	chr3.1:92652019-92652038	None:intergenic	60.0%
	GCGAAGACGGAGTGGCTTGA+TGG	+	chr3.1:92652298-92652317	MS.gene68153:CDS	60.0%
	GCTACCGAGTCCTTTCTCCC+CGG	-	chr3.1:92652053-92652072	None:intergenic	60.0%
	GGTGACTTCACCGCCGGTAA+TGG	+	chr3.1:92652142-92652161	MS.gene68153:CDS	60.0%
	GTTATCGGCGGTGAGAGGAG+TGG	-	chr3.1:92652014-92652033	None:intergenic	60.0%
	TATGCACGGCGAAGACGGAG+TGG	+	chr3.1:92652290-92652309	MS.gene68153:CDS	60.0%
	TCAATGGCGAATGCGGGACC+CGG	+	chr3.1:92652244-92652263	MS.gene68153:CDS	60.0%
	TCCACCGGTACCATTACCGG+CGG	-	chr3.1:92652155-92652174	None:intergenic	60.0%
	TGCACCGGGGAGAAAGGACT+CGG	+	chr3.1:92652046-92652065	MS.gene68153:CDS	60.0%
	TGGGATTGGGGTTGGGGATG+GGG	-	chr3.1:92651922-92651941	None:intergenic	60.0%
!	CCCGTAGATGGACTCTCCAC+CGG	-	chr3.1:92652170-92652189	None:intergenic	60.0%
	ACCGTCGGAGACGAACCGGT+CGG	+	chr3.1:92651959-92651978	MS.gene68153:CDS	65.0%
	CTTCCGTGCACTCTGCACCG+GGG	+	chr3.1:92652033-92652052	MS.gene68153:CDS	65.0%
	GCACTCTGCACCGGGGAGAA+AGG	+	chr3.1:92652040-92652059	MS.gene68153:CDS	65.0%
	GGCGGTGAGAGGAGTGGTGT+CGG	-	chr3.1:92652008-92652027	None:intergenic	65.0%
	TCTCCCCGGTGCAGAGTGCA+CGG	-	chr3.1:92652039-92652058	None:intergenic	65.0%
!	ACCGCCGGTAATGGTACCGG+TGG	+	chr3.1:92652151-92652170	MS.gene68153:CDS	65.0%
!!	TCCGACCGGTTCGTCTCCGA+CGG	-	chr3.1:92651963-92651982	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	92651911	92652477	92651911	ID=MS.gene68153
chr3.1	mRNA	92651911	92652477	92651911	ID=MS.gene68153.t1;Parent=MS.gene68153
chr3.1	exon	92651911	92652477	92651911	ID=MS.gene68153.t1.exon1;Parent=MS.gene68153.t1
chr3.1	CDS	92651911	92652477	92651911	ID=cds.MS.gene68153.t1;Parent=MS.gene68153.t1

Gene Sequence

>MS.gene68153

ATGTCTAACCCCATCCCCAACCCCAATCCCAAAGTCTTCTTCGACATGACCGTCGGAGACGAACCGGTCGGACGTATCGTCATGGAACTTTACGCCGACACCACTCCTCTCACCGCCGATAACTTCCGTGCACTCTGCACCGGGGAGAAAGGACTCGGTAGCAGTGGCAAGCCTCTCCATTACAAAGGCTCTATCTTCCACCGCGTCATACCTGATTTCATGTGTCAAGGAGGTGACTTCACCGCCGGTAATGGTACCGGTGGAGAGTCCATCTACGGGTCCAAATTCGCCGACGAGAATTTCATCAAGACCCACACAGGTCCAGGTGTTCTTTCAATGGCGAATGCGGGACCCGGTACGAATGGATCACAGTTCTTCATATGCACGGCGAAGACGGAGTGGCTTGATGGGAAACATGTGGTTTTTGGTGAGGTGGTTGAAGGAATGGAGGTGGTGAAAGAGATTGAGAAAGTTGGGTCCGGTTCGGGGAAAACATCAAAGCCGGTGGTTATTGCTGACTGCGGCCAACTCTCTGATGATAATGATCTTAACCAACAACATATATAG

Protein sequence

>MS.gene68153.t1

MSNPIPNPNPKVFFDMTVGDEPVGRIVMELYADTTPLTADNFRALCTGEKGLGSSGKPLHYKGSIFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFADENFIKTHTGPGVLSMANAGPGTNGSQFFICTAKTEWLDGKHVVFGEVVEGMEVVKEIEKVGSGSGKTSKPVVIADCGQLSDDNDLNQQHI