AlfalfaGEDB | MS.gene39668

M. sativa cultivar XinJiangDaYe / MS.gene39668

KEGG: K01802
GO: GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564
PFAM: PF00160.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39668.t1	XP_003607272.1	92.4	172	13	0	27	198	1	172	5.20E-90	340.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39668.t1	Q8W171	84.9	172	26	0	27	198	1	172	3.9e-86	318.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39668.t1	G7JPK2	92.4	172	13	0	27	198	1	172	3.8e-90	340.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene39668	MS.gene04526	PPI
MS.gene39668	MS.gene68752	PPI
MS.gene39668	MS.gene050574	PPI
MS.gene39668	MS.gene019366	PPI
MS.gene39668	MS.gene28703	PPI
MS.gene39668	MS.gene28963	PPI
MS.gene39668	MS.gene47195	PPI
MS.gene39668	MS.gene23546	PPI
MS.gene39668	MS.gene025980	PPI
MS.gene39668	MS.gene024514	PPI
MS.gene39668	MS.gene063104	PPI
MS.gene39668	MS.gene72809	PPI
MS.gene39668	MS.gene88451	PPI
MS.gene39668	MS.gene55545	PPI
MS.gene39668	MS.gene23663	PPI
MS.gene39668	MS.gene063787	PPI
MS.gene39668	MS.gene007179	PPI
MS.gene39668	MS.gene61767	PPI
MS.gene39668	MS.gene82121	PPI
MS.gene39668	MS.gene028111	PPI
MS.gene39668	MS.gene014216	PPI
MS.gene68752	MS.gene39668	PPI
MS.gene88451	MS.gene39668	PPI
MS.gene39668	MS.gene052266	PPI
MS.gene39668	MS.gene051153	PPI
MS.gene025980	MS.gene39668	PPI
MS.gene39668	MS.gene22872	PPI
MS.gene39668	MS.gene003412	PPI
MS.gene39668	MS.gene048458	PPI
MS.gene39668	MS.gene050281	PPI
MS.gene39668	MS.gene83474	PPI
MS.gene39668	MS.gene04515	PPI
MS.gene39668	MS.gene074045	PPI
MS.gene39668	MS.gene052269	PPI
MS.gene68153	MS.gene39668	PPI
MS.gene39668	MS.gene68153	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39668.t1	MTR_4g075290	92.442	172	13	0	27	198	1	172	2.69e-117	330
MS.gene39668.t1	MTR_3g117750	85.714	168	24	0	31	198	13	180	1.02e-106	304
MS.gene39668.t1	MTR_7g116340	75.581	172	42	0	27	198	1	172	2.77e-96	277
MS.gene39668.t1	MTR_3g463900	66.467	167	56	0	31	197	35	201	5.14e-80	237
MS.gene39668.t1	MTR_3g070500	62.500	168	63	0	31	198	65	232	3.14e-76	229
MS.gene39668.t1	MTR_7g095750	62.573	171	63	1	29	198	6	176	1.14e-72	231
MS.gene39668.t1	MTR_1g085560	65.753	146	43	1	31	176	86	224	2.35e-67	207
MS.gene39668.t1	MTR_8g079690	58.857	175	68	3	27	198	1	174	5.21e-66	207
MS.gene39668.t1	MTR_7g110980	58.084	167	58	2	31	197	97	251	1.69e-64	200
MS.gene39668.t1	MTR_1g117010	58.480	171	60	3	31	197	78	241	3.75e-64	198
MS.gene39668.t1	MTR_1g117010	58.480	171	60	3	31	197	78	241	3.75e-64	198
MS.gene39668.t1	MTR_8g040180	55.682	176	74	3	24	197	12	185	5.67e-64	196
MS.gene39668.t1	MTR_4g086760	55.429	175	72	3	27	197	1	173	7.05e-61	192
MS.gene39668.t1	MTR_4g086760	55.429	175	72	3	27	197	1	173	8.35e-61	193
MS.gene39668.t1	MTR_4g086760	55.429	175	72	3	27	197	1	173	9.43e-61	192
MS.gene39668.t1	MTR_3g070500	68.548	124	39	0	31	154	65	188	9.55e-61	187
MS.gene39668.t1	MTR_4g073650	52.381	168	79	1	31	197	47	214	1.28e-57	181
MS.gene39668.t1	MTR_3g107660	52.695	167	78	1	29	194	9	175	2.71e-52	179
MS.gene39668.t1	MTR_1g011980	51.875	160	75	2	25	183	2	160	8.83e-47	164
MS.gene39668.t1	MTR_3g070500	68.687	99	31	0	31	129	65	163	2.23e-46	150
MS.gene39668.t1	MTR_3g070500	68.367	98	31	0	31	128	65	162	6.04e-46	149
MS.gene39668.t1	MTR_2g085075	48.980	147	59	5	44	188	471	603	1.71e-33	125
MS.gene39668.t1	MTR_7g105220	50.000	138	53	5	44	178	19	143	2.80e-33	117
MS.gene39668.t1	MTR_8g036015	50.350	143	55	5	44	183	10	139	7.63e-33	115
MS.gene39668.t1	MTR_5g015500	47.794	136	59	4	44	178	314	438	5.30e-28	110
MS.gene39668.t1	MTR_3g085705	47.107	121	59	3	63	183	7	122	5.85e-28	102
MS.gene39668.t1	MTR_5g015500	47.794	136	59	4	44	178	354	478	8.48e-28	109
MS.gene39668.t1	MTR_6g084140	36.538	156	78	7	44	189	27	171	2.65e-19	85.5
MS.gene39668.t1	MTR_6g084140	36.538	156	78	7	44	189	10	154	2.66e-19	85.5
MS.gene39668.t1	MTR_8g442420	35.897	156	79	7	44	189	10	154	5.81e-18	81.6
MS.gene39668.t1	MTR_2g023120	45.238	126	52	7	44	165	22	134	2.25e-17	79.7
MS.gene39668.t1	MTR_1g094065	36.242	149	69	6	44	187	89	216	2.62e-14	69.3
MS.gene39668.t1	MTR_1g035360	30.573	157	91	5	44	197	88	229	4.02e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39668.t1	AT2G16600	81.871	171	31	0	28	198	3	173	1.57e-104	298
MS.gene39668.t1	AT2G21130	80.702	171	33	0	28	198	3	173	5.23e-103	294
MS.gene39668.t1	AT4G38740	80.233	172	34	0	27	198	1	172	1.31e-101	291
MS.gene39668.t1	AT4G34870	79.070	172	36	0	27	198	1	172	4.36e-98	282
MS.gene39668.t1	AT3G56070	71.930	171	48	0	27	197	1	171	6.55e-90	261
MS.gene39668.t1	AT3G56070	71.930	171	48	0	27	197	1	171	6.55e-90	261
MS.gene39668.t1	AT2G16600	70.175	171	29	1	28	198	3	151	1.69e-82	241
MS.gene39668.t1	AT2G29960	64.671	167	59	0	31	197	33	199	7.43e-79	234
MS.gene39668.t1	AT2G29960	64.671	167	59	0	31	197	33	199	7.43e-79	234
MS.gene39668.t1	AT5G58710	65.269	167	58	0	31	197	36	202	2.00e-77	231
MS.gene39668.t1	AT3G63400	65.497	171	58	1	29	198	6	176	3.16e-77	236
MS.gene39668.t1	AT3G55920	62.500	168	63	0	31	198	60	227	7.82e-76	228
MS.gene39668.t1	AT3G63400	65.497	171	58	1	29	198	6	176	1.55e-75	237
MS.gene39668.t1	AT3G63400	65.497	171	58	1	29	198	6	176	1.55e-75	237
MS.gene39668.t1	AT3G63400	65.497	171	58	1	29	198	6	176	1.55e-75	237
MS.gene39668.t1	AT5G13120	57.143	196	73	3	6	197	62	250	3.16e-72	219
MS.gene39668.t1	AT5G13120	57.143	196	73	3	6	197	66	254	4.55e-72	219
MS.gene39668.t1	AT3G62030	66.013	153	45	1	24	176	88	233	3.19e-70	214
MS.gene39668.t1	AT3G62030	66.013	153	45	1	24	176	89	234	3.75e-70	214
MS.gene39668.t1	AT2G29960	60.479	167	56	1	31	197	33	189	6.97e-70	211
MS.gene39668.t1	AT3G62030	66.013	153	45	1	24	176	142	287	1.88e-69	214
MS.gene39668.t1	AT2G38730	54.098	183	80	3	17	197	19	199	2.35e-63	195
MS.gene39668.t1	AT2G15790	56.647	173	73	2	27	197	1	173	1.20e-61	196
MS.gene39668.t1	AT4G34960	51.786	168	80	1	31	197	48	215	2.79e-58	182
MS.gene39668.t1	AT3G22920	52.273	176	72	5	27	198	1	168	1.17e-54	174
MS.gene39668.t1	AT4G32420	49.708	171	85	1	25	194	2	172	2.40e-49	171
MS.gene39668.t1	AT4G32420	49.708	171	85	1	25	194	2	172	2.40e-49	171
MS.gene39668.t1	AT4G32420	49.708	171	85	1	25	194	2	172	2.40e-49	171
MS.gene39668.t1	AT4G32420	49.708	171	85	1	25	194	2	172	2.40e-49	171
MS.gene39668.t1	AT4G32420	50.932	161	78	1	25	184	2	162	9.01e-48	167
MS.gene39668.t1	AT4G34960	54.839	124	56	0	31	154	48	171	1.21e-46	151
MS.gene39668.t1	AT2G36130	44.785	163	71	6	28	189	8	152	2.01e-34	120
MS.gene39668.t1	AT3G44600	48.980	147	59	6	44	188	485	617	4.38e-32	122
MS.gene39668.t1	AT1G01940	47.552	143	59	5	44	183	10	139	1.83e-31	112
MS.gene39668.t1	AT5G67530	44.048	168	73	6	16	178	326	477	9.86e-28	109
MS.gene39668.t1	AT4G33060	47.200	125	53	5	44	166	22	135	1.40e-24	100
MS.gene39668.t1	AT1G53720	36.170	141	70	5	44	175	10	139	2.30e-17	79.3
MS.gene39668.t1	AT1G53720	36.170	141	70	5	44	175	10	139	4.86e-17	79.0

Find 75 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GACAATAATGGTGTCGATTT+GGG	0.294757	8.3:-79713686	None:intergenic
TGACAATAATGGTGTCGATT+TGG	0.317881	8.3:-79713687	None:intergenic
CCTCCCTGACACATGAAGTT+AGG	0.347806	8.3:-79713931	None:intergenic
CTCAACAGAGCAGCTATGTT+TGG	0.358430	8.3:+79713646	None:intergenic
ATCAAGAAGCACACCGGTCC+TGG	0.379174	8.3:+79714024	MS.gene39668:CDS
GACGGAAAGCACGTCATGTT+TGG	0.386302	8.3:+79714126	MS.gene39668:CDS
AACTGAGATCCATTGGTTCC+TGG	0.395599	8.3:-79714072	None:intergenic
CAGCAATCCGCGGTCACAAC+TGG	0.397875	8.3:-79714222	None:intergenic
TTAGGGTTAGACATGGTTGC+AGG	0.404912	8.3:-79713730	None:intergenic
CGGTCCTGGAATCCTCTCTA+TGG	0.406265	8.3:+79714038	MS.gene39668:CDS
TTCGCCATAGAGAGGATTCC+AGG	0.414625	8.3:-79714042	None:intergenic
CAGCTATGTTTGGAGAGATC+AGG	0.420486	8.3:+79713656	None:intergenic
CGCGGTCACAACTGGCTTCG+AGG	0.433686	8.3:-79714214	None:intergenic
GAGAAAGTCGGATCTGGATC+TGG	0.446422	8.3:+79714186	MS.gene39668:CDS
GTCATGTCAAAGAAAACCTT+AGG	0.446960	8.3:-79713748	None:intergenic
TGGTCAGGTTGTTGAAGGTC+TGG	0.448725	8.3:+79714146	MS.gene39668:CDS
GAGATCGAGAAAGTCGGATC+TGG	0.448823	8.3:+79714180	MS.gene39668:CDS
GCTCTCTGCACCGGCGAGAA+AGG	0.450593	8.3:+79713850	MS.gene39668:CDS
ATGTTTGGTCAGGTTGTTGA+AGG	0.453961	8.3:+79714141	MS.gene39668:CDS
GATCCCTAACTTCATGTGTC+AGG	0.471623	8.3:+79713927	MS.gene39668:CDS
CTCCCTGACACATGAAGTTA+GGG	0.480325	8.3:-79713930	None:intergenic
AAAGCACGTCATGTTTGGTC+AGG	0.481967	8.3:+79714131	MS.gene39668:CDS
TTCACCAACGGAAACGGTAC+CGG	0.483169	8.3:+79713958	MS.gene39668:CDS
TGCACCGGCGAGAAAGGAAT+CGG	0.498695	8.3:+79713856	MS.gene39668:CDS
TCTATGGCGAACGCTGGTCC+AGG	0.507702	8.3:+79714054	MS.gene39668:CDS
GCCTCCGGTACCGTTTCCGT+TGG	0.509269	8.3:-79713962	None:intergenic
GTCAAGCCACTCGGTCTTAG+CGG	0.511607	8.3:-79714106	None:intergenic
TCCGTAGATCGATTCGCCTC+CGG	0.512965	8.3:-79713977	None:intergenic
ACCGTCGGTGGCAACCCTGC+CGG	0.519458	8.3:+79713769	MS.gene39668:CDS
GCTAAGACCGAGTGGCTTGA+CGG	0.523838	8.3:+79714108	MS.gene39668:CDS
TCGATGGCAGTTGACAATAA+TGG	0.525233	8.3:-79713698	None:intergenic
ACGGAAATTCTCGACGGTGT+GGG	0.526833	8.3:-79713827	None:intergenic
TCGAAGATGATACGTCCGGC+AGG	0.533363	8.3:-79713784	None:intergenic
GGTGATTTCACCAACGGAAA+CGG	0.538147	8.3:+79713952	MS.gene39668:CDS
CGGAAATTCTCGACGGTGTG+GGG	0.540369	8.3:-79713826	None:intergenic
GCGGCCGATTCCTTTCTCGC+CGG	0.541350	8.3:-79713860	None:intergenic
CATAGAGAGGATTCCAGGAC+CGG	0.544668	8.3:-79714037	None:intergenic
TGCAACCATGTCTAACCCTA+AGG	0.552767	8.3:+79713732	MS.gene39668:CDS
AGCTATGTTTGGAGAGATCA+GGG	0.553050	8.3:+79713657	None:intergenic
GTGCTTTCCGTCAAGCCACT+CGG	0.554025	8.3:-79714115	None:intergenic
GACGGTGTGGGGAGTGACAT+CGG	0.559498	8.3:-79713815	None:intergenic
GGCAAACCACTCCACTTCAA+AGG	0.560943	8.3:+79713886	MS.gene39668:CDS
CACGGAAATTCTCGACGGTG+TGG	0.563685	8.3:-79713828	None:intergenic
AACGCTGGTCCAGGAACCAA+TGG	0.563853	8.3:+79714063	MS.gene39668:CDS
ACCGGAGGCGAATCGATCTA+CGG	0.566609	8.3:+79713976	MS.gene39668:CDS
ATCCCTAACTTCATGTGTCA+GGG	0.567025	8.3:+79713928	MS.gene39668:CDS
TCCGGCAGGGTTGCCACCGA+CGG	0.568975	8.3:-79713770	None:intergenic
GAAGATCCTTTGAAGTGGAG+TGG	0.570002	8.3:-79713892	None:intergenic
GTTAGGGATCACACGGTGGA+AGG	0.570770	8.3:-79713914	None:intergenic
TTCTTTGACATGACCGTCGG+TGG	0.572038	8.3:+79713757	MS.gene39668:CDS
AATTTCCGTGCTCTCTGCAC+CGG	0.574186	8.3:+79713841	MS.gene39668:CDS
TCTCGCCGGTGCAGAGAGCA+CGG	0.577434	8.3:-79713846	None:intergenic
AAGCTCGAAGATGATACGTC+CGG	0.581315	8.3:-79713788	None:intergenic
TAGGGTTAGACATGGTTGCA+GGG	0.591965	8.3:-79713729	None:intergenic
TCATGTCAAAGAAAACCTTA+GGG	0.598027	8.3:-79713747	None:intergenic
GGAAGGAAGATCCTTTGAAG+TGG	0.600412	8.3:-79713897	None:intergenic
GAGAAAGGAATCGGCCGCAG+CGG	0.601998	8.3:+79713865	MS.gene39668:CDS
AGTGGAGTGGTTTGCCGCTG+CGG	0.604904	8.3:-79713879	None:intergenic
CAGGGAGGTGATTTCACCAA+CGG	0.616760	8.3:+79713946	MS.gene39668:CDS
ATCCTCTCTATGGCGAACGC+TGG	0.620047	8.3:+79714048	MS.gene39668:CDS
CTCGAAGCCAGTTGTGACCG+CGG	0.623153	8.3:+79714215	MS.gene39668:CDS
GACCAGCGTTCGCCATAGAG+AGG	0.626920	8.3:-79714050	None:intergenic
CGAAGATGATACGTCCGGCA+GGG	0.628794	8.3:-79713783	None:intergenic
TGAAGGTCTGGAAGTCGTGA+AGG	0.635493	8.3:+79714158	MS.gene39668:CDS
TTGCAGGGAGAGTGAATCGA+TGG	0.635495	8.3:-79713714	None:intergenic
GTGAAGGAGATCGAGAAAGT+CGG	0.645598	8.3:+79714174	MS.gene39668:CDS
GAAAACCTTAGGGTTAGACA+TGG	0.654477	8.3:-79713737	None:intergenic
ACATGAAGTTAGGGATCACA+CGG	0.667907	8.3:-79713921	None:intergenic
ACCAACGGAAACGGTACCGG+AGG	0.677978	8.3:+79713961	MS.gene39668:CDS
AATTTCATCAAGAAGCACAC+CGG	0.680067	8.3:+79714018	MS.gene39668:CDS
CCTAACTTCATGTGTCAGGG+AGG	0.694044	8.3:+79713931	MS.gene39668:CDS
AGAGAGTTGACAGCAATCCG+CGG	0.703053	8.3:-79714232	None:intergenic
GAGAGCACGGAAATTCTCGA+CGG	0.708866	8.3:-79713833	None:intergenic
TCTGCACCGCTAAGACCGAG+TGG	0.712894	8.3:+79714100	MS.gene39668:CDS
TGAAGTTAGGGATCACACGG+TGG	0.759029	8.3:-79713918	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	TCATGTCAAAGAAAACCTTA+GGG	-	chr8.3:79713750-79713769	None:intergenic	30.0%
	GTCATGTCAAAGAAAACCTT+AGG	-	chr8.3:79713751-79713770	None:intergenic	35.0%
!	AATTTCATCAAGAAGCACAC+CGG	+	chr8.3:79714018-79714037	MS.gene39668:CDS	35.0%
!!	GACAATAATGGTGTCGATTT+GGG	-	chr8.3:79713689-79713708	None:intergenic	35.0%
!!	TGACAATAATGGTGTCGATT+TGG	-	chr8.3:79713690-79713709	None:intergenic	35.0%
	ACATGAAGTTAGGGATCACA+CGG	-	chr8.3:79713924-79713943	None:intergenic	40.0%
	ATCCCTAACTTCATGTGTCA+GGG	+	chr8.3:79713928-79713947	MS.gene39668:CDS	40.0%
	GAAAACCTTAGGGTTAGACA+TGG	-	chr8.3:79713740-79713759	None:intergenic	40.0%
	GACGAAAAACTGAGATCCAT+TGG	-	chr8.3:79714082-79714101	None:intergenic	40.0%
	TCGATGGCAGTTGACAATAA+TGG	-	chr8.3:79713701-79713720	None:intergenic	40.0%
!	ATGTTTGGTCAGGTTGTTGA+AGG	+	chr8.3:79714141-79714160	MS.gene39668:CDS	40.0%
!	GTTTTCTTTGACATGACCGT+CGG	+	chr8.3:79713754-79713773	MS.gene39668:CDS	40.0%
	AAAGCACGTCATGTTTGGTC+AGG	+	chr8.3:79714131-79714150	MS.gene39668:CDS	45.0%
	AAGCTCGAAGATGATACGTC+CGG	-	chr8.3:79713791-79713810	None:intergenic	45.0%
	CTCCCTGACACATGAAGTTA+GGG	-	chr8.3:79713933-79713952	None:intergenic	45.0%
	GATCCCTAACTTCATGTGTC+AGG	+	chr8.3:79713927-79713946	MS.gene39668:CDS	45.0%
	GGTGATTTCACCAACGGAAA+CGG	+	chr8.3:79713952-79713971	MS.gene39668:CDS	45.0%
	GTGAAGGAGATCGAGAAAGT+CGG	+	chr8.3:79714174-79714193	MS.gene39668:CDS	45.0%
	TAGGGTTAGACATGGTTGCA+GGG	-	chr8.3:79713732-79713751	None:intergenic	45.0%
	TGCAACCATGTCTAACCCTA+AGG	+	chr8.3:79713732-79713751	MS.gene39668:CDS	45.0%
	TTAGGGTTAGACATGGTTGC+AGG	-	chr8.3:79713733-79713752	None:intergenic	45.0%
!	GGAAGGAAGATCCTTTGAAG+TGG	-	chr8.3:79713900-79713919	None:intergenic	45.0%
!!	AACTGAGATCCATTGGTTCC+TGG	-	chr8.3:79714075-79714094	None:intergenic	45.0%
!!	GAAGATCCTTTGAAGTGGAG+TGG	-	chr8.3:79713895-79713914	None:intergenic	45.0%
	AATTTCCGTGCTCTCTGCAC+CGG	+	chr8.3:79713841-79713860	MS.gene39668:CDS	50.0%
	ACGGAAATTCTCGACGGTGT+GGG	-	chr8.3:79713830-79713849	None:intergenic	50.0%
	AGAGAGTTGACAGCAATCCG+CGG	-	chr8.3:79714235-79714254	None:intergenic	50.0%
	CAGGGAGGTGATTTCACCAA+CGG	+	chr8.3:79713946-79713965	MS.gene39668:CDS	50.0%
	CATAGAGAGGATTCCAGGAC+CGG	-	chr8.3:79714040-79714059	None:intergenic	50.0%
	CCTAACTTCATGTGTCAGGG+AGG	+	chr8.3:79713931-79713950	MS.gene39668:CDS	50.0%
	CCTCCCTGACACATGAAGTT+AGG	-	chr8.3:79713934-79713953	None:intergenic	50.0%
	GAGAAAGTCGGATCTGGATC+TGG	+	chr8.3:79714186-79714205	MS.gene39668:CDS	50.0%
	GAGATCGAGAAAGTCGGATC+TGG	+	chr8.3:79714180-79714199	MS.gene39668:CDS	50.0%
	GGCAAACCACTCCACTTCAA+AGG	+	chr8.3:79713886-79713905	MS.gene39668:CDS	50.0%
	TGAAGGTCTGGAAGTCGTGA+AGG	+	chr8.3:79714158-79714177	MS.gene39668:CDS	50.0%
	TGAAGTTAGGGATCACACGG+TGG	-	chr8.3:79713921-79713940	None:intergenic	50.0%
	TTCACCAACGGAAACGGTAC+CGG	+	chr8.3:79713958-79713977	MS.gene39668:CDS	50.0%
	TTCGCCATAGAGAGGATTCC+AGG	-	chr8.3:79714045-79714064	None:intergenic	50.0%
	TTCTTTGACATGACCGTCGG+TGG	+	chr8.3:79713757-79713776	MS.gene39668:CDS	50.0%
	TTGCAGGGAGAGTGAATCGA+TGG	-	chr8.3:79713717-79713736	None:intergenic	50.0%
!	GACGGAAAGCACGTCATGTT+TGG	+	chr8.3:79714126-79714145	MS.gene39668:CDS	50.0%
!	GAGAGCACGGAAATTCTCGA+CGG	-	chr8.3:79713836-79713855	None:intergenic	50.0%
!	TGGTCAGGTTGTTGAAGGTC+TGG	+	chr8.3:79714146-79714165	MS.gene39668:CDS	50.0%
	AACGCTGGTCCAGGAACCAA+TGG	+	chr8.3:79714063-79714082	MS.gene39668:CDS	55.0%
	ACCGGAGGCGAATCGATCTA+CGG	+	chr8.3:79713976-79713995	MS.gene39668:CDS	55.0%
	ATCCTCTCTATGGCGAACGC+TGG	+	chr8.3:79714048-79714067	MS.gene39668:CDS	55.0%
	CACGGAAATTCTCGACGGTG+TGG	-	chr8.3:79713831-79713850	None:intergenic	55.0%
	CGAAGATGATACGTCCGGCA+GGG	-	chr8.3:79713786-79713805	None:intergenic	55.0%
	CGGAAATTCTCGACGGTGTG+GGG	-	chr8.3:79713829-79713848	None:intergenic	55.0%
	CGGTCCTGGAATCCTCTCTA+TGG	+	chr8.3:79714038-79714057	MS.gene39668:CDS	55.0%
	GCTAAGACCGAGTGGCTTGA+CGG	+	chr8.3:79714108-79714127	MS.gene39668:CDS	55.0%
	GTCAAGCCACTCGGTCTTAG+CGG	-	chr8.3:79714109-79714128	None:intergenic	55.0%
	GTGCTTTCCGTCAAGCCACT+CGG	-	chr8.3:79714118-79714137	None:intergenic	55.0%
	GTTAGGGATCACACGGTGGA+AGG	-	chr8.3:79713917-79713936	None:intergenic	55.0%
	TCGAAGATGATACGTCCGGC+AGG	-	chr8.3:79713787-79713806	None:intergenic	55.0%
!	ATCAAGAAGCACACCGGTCC+TGG	+	chr8.3:79714024-79714043	MS.gene39668:CDS	55.0%
!	TGCACCGGCGAGAAAGGAAT+CGG	+	chr8.3:79713856-79713875	MS.gene39668:CDS	55.0%
!!	TCCGTAGATCGATTCGCCTC+CGG	-	chr8.3:79713980-79713999	None:intergenic	55.0%
	CAGCAATCCGCGGTCACAAC+TGG	-	chr8.3:79714225-79714244	None:intergenic	60.0%
	CTCGAAGCCAGTTGTGACCG+CGG	+	chr8.3:79714215-79714234	MS.gene39668:CDS	60.0%
	GACCAGCGTTCGCCATAGAG+AGG	-	chr8.3:79714053-79714072	None:intergenic	60.0%
	GACGGTGTGGGGAGTGACAT+CGG	-	chr8.3:79713818-79713837	None:intergenic	60.0%
	GAGAAAGGAATCGGCCGCAG+CGG	+	chr8.3:79713865-79713884	MS.gene39668:CDS	60.0%
	TCTATGGCGAACGCTGGTCC+AGG	+	chr8.3:79714054-79714073	MS.gene39668:CDS	60.0%
	TCTGCACCGCTAAGACCGAG+TGG	+	chr8.3:79714100-79714119	MS.gene39668:CDS	60.0%
!	ACCAACGGAAACGGTACCGG+AGG	+	chr8.3:79713961-79713980	MS.gene39668:CDS	60.0%
!	AGTGGAGTGGTTTGCCGCTG+CGG	-	chr8.3:79713882-79713901	None:intergenic	60.0%
	GCCTCCGGTACCGTTTCCGT+TGG	-	chr8.3:79713965-79713984	None:intergenic	65.0%
	TCTCGCCGGTGCAGAGAGCA+CGG	-	chr8.3:79713849-79713868	None:intergenic	65.0%
!	CGCGGTCACAACTGGCTTCG+AGG	-	chr8.3:79714217-79714236	None:intergenic	65.0%
!	GCGGCCGATTCCTTTCTCGC+CGG	-	chr8.3:79713863-79713882	None:intergenic	65.0%
!	GCTCTCTGCACCGGCGAGAA+AGG	+	chr8.3:79713850-79713869	MS.gene39668:CDS	65.0%
	ACCGTCGGTGGCAACCCTGC+CGG	+	chr8.3:79713769-79713788	MS.gene39668:CDS	70.0%
	TCCGGCAGGGTTGCCACCGA+CGG	-	chr8.3:79713773-79713792	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	79713661	79714257	79713661	ID=MS.gene39668
chr8.3	mRNA	79713661	79714257	79713661	ID=MS.gene39668.t1;Parent=MS.gene39668
chr8.3	exon	79713661	79714257	79713661	ID=MS.gene39668.t1.exon1;Parent=MS.gene39668.t1
chr8.3	CDS	79713661	79714257	79713661	ID=cds.MS.gene39668.t1;Parent=MS.gene39668.t1

Gene Sequence

>MS.gene39668

ATGTTTGGAGAGATCAGGGAGAACTCCCAAATCGACACCATTATTGTCAACTGCCATCGATTCACTCTCCCTGCAACCATGTCTAACCCTAAGGTTTTCTTTGACATGACCGTCGGTGGCAACCCTGCCGGACGTATCATCTTCGAGCTTTTCGCCGATGTCACTCCCCACACCGTCGAGAATTTCCGTGCTCTCTGCACCGGCGAGAAAGGAATCGGCCGCAGCGGCAAACCACTCCACTTCAAAGGATCTTCCTTCCACCGTGTGATCCCTAACTTCATGTGTCAGGGAGGTGATTTCACCAACGGAAACGGTACCGGAGGCGAATCGATCTACGGATCAAAGTTCGCTGATGAGAATTTCATCAAGAAGCACACCGGTCCTGGAATCCTCTCTATGGCGAACGCTGGTCCAGGAACCAATGGATCTCAGTTTTTCGTCTGCACCGCTAAGACCGAGTGGCTTGACGGAAAGCACGTCATGTTTGGTCAGGTTGTTGAAGGTCTGGAAGTCGTGAAGGAGATCGAGAAAGTCGGATCTGGATCTGGAAAGACCTCGAAGCCAGTTGTGACCGCGGATTGCTGTCAACTCTCTTAG

Protein sequence

>MS.gene39668.t1

MFGEIRENSQIDTIIVNCHRFTLPATMSNPKVFFDMTVGGNPAGRIIFELFADVTPHTVENFRALCTGEKGIGRSGKPLHFKGSSFHRVIPNFMCQGGDFTNGNGTGGESIYGSKFADENFIKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVMFGQVVEGLEVVKEIEKVGSGSGKTSKPVVTADCCQLS