AlfalfaGEDB | MS.gene003412

M. sativa cultivar XinJiangDaYe / MS.gene003412

KEGG: K01802
GO: GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564
PFAM: PF00160.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003412.t1	XP_003607272.1	95.9	172	7	0	1	172	1	172	5.70E-93	350.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003412.t1	Q8W171	88.4	172	20	0	1	172	1	172	4.3e-89	328.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003412.t1	G7JPK2	95.9	172	7	0	1	172	1	172	4.1e-93	350.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene003412	MS.gene04526	PPI
MS.gene014216	MS.gene003412	PPI
MS.gene052269	MS.gene003412	PPI
MS.gene063104	MS.gene003412	PPI
MS.gene063787	MS.gene003412	PPI
MS.gene23663	MS.gene003412	PPI
MS.gene003412	MS.gene47195	PPI
MS.gene051153	MS.gene003412	PPI
MS.gene003412	MS.gene23546	PPI
MS.gene003412	MS.gene024514	PPI
MS.gene55545	MS.gene003412	PPI
MS.gene003412	MS.gene72809	PPI
MS.gene019366	MS.gene003412	PPI
MS.gene003412	MS.gene007179	PPI
MS.gene61767	MS.gene003412	PPI
MS.gene003412	MS.gene028111	PPI
MS.gene003412	MS.gene014216	PPI
MS.gene003412	MS.gene074045	PPI
MS.gene003412	MS.gene052266	PPI
MS.gene28963	MS.gene003412	PPI
MS.gene68752	MS.gene003412	PPI
MS.gene88451	MS.gene003412	PPI
MS.gene83474	MS.gene003412	PPI
MS.gene050574	MS.gene003412	PPI
MS.gene39668	MS.gene003412	PPI
MS.gene82121	MS.gene003412	PPI
MS.gene003412	MS.gene048458	PPI
MS.gene003412	MS.gene04515	PPI
MS.gene28703	MS.gene003412	PPI
MS.gene050281	MS.gene003412	PPI
MS.gene22872	MS.gene003412	PPI
MS.gene025980	MS.gene003412	PPI
MS.gene68153	MS.gene003412	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003412.t1	MTR_4g075290	95.930	172	7	0	1	172	1	172	9.03e-122	340
MS.gene003412.t1	MTR_3g117750	88.095	168	20	0	5	172	13	180	2.10e-110	312
MS.gene003412.t1	MTR_7g116340	77.326	172	39	0	1	172	1	172	2.65e-100	286
MS.gene003412.t1	MTR_3g463900	68.263	167	53	0	5	171	35	201	1.74e-83	245
MS.gene003412.t1	MTR_3g070500	65.476	168	58	0	5	172	65	232	2.70e-80	238
MS.gene003412.t1	MTR_7g095750	64.327	171	60	1	3	172	6	176	5.90e-78	244
MS.gene003412.t1	MTR_8g079690	60.571	175	65	3	1	172	1	174	7.82e-70	215
MS.gene003412.t1	MTR_1g085560	65.753	146	43	1	5	150	86	224	4.32e-68	207
MS.gene003412.t1	MTR_8g040180	59.064	171	66	3	3	171	17	185	8.81e-68	204
MS.gene003412.t1	MTR_7g110980	59.524	168	60	2	5	171	97	257	1.65e-67	206
MS.gene003412.t1	MTR_1g117010	59.649	171	58	3	5	171	78	241	5.02e-66	202
MS.gene003412.t1	MTR_1g117010	59.649	171	58	3	5	171	78	241	5.02e-66	202
MS.gene003412.t1	MTR_4g086760	57.714	175	68	3	1	171	1	173	3.95e-65	202
MS.gene003412.t1	MTR_4g086760	57.714	175	68	3	1	171	1	173	4.23e-65	203
MS.gene003412.t1	MTR_4g086760	57.714	175	68	3	1	171	1	173	4.84e-65	202
MS.gene003412.t1	MTR_3g070500	70.161	124	37	0	5	128	65	188	2.19e-62	191
MS.gene003412.t1	MTR_4g073650	53.571	168	77	1	5	171	47	214	4.06e-60	186
MS.gene003412.t1	MTR_3g107660	53.846	169	77	1	3	170	9	177	1.19e-54	185
MS.gene003412.t1	MTR_1g011980	52.071	169	79	2	3	170	6	173	1.56e-48	167
MS.gene003412.t1	MTR_3g070500	70.707	99	29	0	5	103	65	163	7.35e-48	153
MS.gene003412.t1	MTR_3g070500	70.408	98	29	0	5	102	65	162	1.41e-47	152
MS.gene003412.t1	MTR_7g105220	50.725	138	52	5	18	152	19	143	4.88e-35	120
MS.gene003412.t1	MTR_8g036015	51.049	143	54	5	18	157	10	139	1.03e-34	119
MS.gene003412.t1	MTR_2g085075	48.980	147	59	5	18	162	471	603	3.50e-34	126
MS.gene003412.t1	MTR_5g015500	49.265	136	57	4	18	152	314	438	8.79e-30	114
MS.gene003412.t1	MTR_5g015500	49.265	136	57	4	18	152	354	478	1.43e-29	113
MS.gene003412.t1	MTR_3g085705	48.760	121	57	3	37	157	7	122	2.33e-29	105
MS.gene003412.t1	MTR_6g084140	37.342	158	78	7	18	165	27	173	3.36e-20	87.0
MS.gene003412.t1	MTR_6g084140	37.342	158	78	7	18	165	10	156	3.47e-20	87.0
MS.gene003412.t1	MTR_8g442420	36.709	158	79	7	18	165	10	156	4.87e-19	83.6
MS.gene003412.t1	MTR_2g023120	42.742	124	58	5	18	139	22	134	1.77e-17	79.3
MS.gene003412.t1	MTR_1g094065	35.526	152	72	6	18	164	89	219	1.69e-14	68.9
MS.gene003412.t1	MTR_1g035360	30.573	157	91	5	18	171	88	229	4.46e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003412.t1	AT2G16600	83.626	171	28	0	2	172	3	173	5.29e-108	306
MS.gene003412.t1	AT2G21130	83.626	171	28	0	2	172	3	173	3.86e-107	303
MS.gene003412.t1	AT4G38740	83.140	172	29	0	1	172	1	172	8.29e-106	300
MS.gene003412.t1	AT4G34870	81.395	172	32	0	1	172	1	172	1.02e-101	290
MS.gene003412.t1	AT3G56070	74.269	171	44	0	1	171	1	171	3.11e-94	271
MS.gene003412.t1	AT3G56070	74.269	171	44	0	1	171	1	171	3.11e-94	271
MS.gene003412.t1	AT2G16600	71.930	171	26	1	2	172	3	151	8.84e-86	249
MS.gene003412.t1	AT2G29960	67.665	167	54	0	5	171	33	199	1.22e-82	243
MS.gene003412.t1	AT2G29960	67.665	167	54	0	5	171	33	199	1.22e-82	243
MS.gene003412.t1	AT3G63400	68.421	171	53	1	3	172	6	176	2.81e-81	246
MS.gene003412.t1	AT5G58710	65.868	167	57	0	5	171	36	202	1.17e-79	235
MS.gene003412.t1	AT3G55920	65.476	168	58	0	5	172	60	227	1.41e-79	236
MS.gene003412.t1	AT3G63400	68.421	171	53	1	3	172	6	176	2.13e-79	246
MS.gene003412.t1	AT3G63400	68.421	171	53	1	3	172	6	176	2.13e-79	246
MS.gene003412.t1	AT3G63400	68.421	171	53	1	3	172	6	176	2.13e-79	246
MS.gene003412.t1	AT2G29960	63.473	167	51	1	5	171	33	189	1.04e-73	219
MS.gene003412.t1	AT5G13120	64.327	171	50	3	5	171	87	250	7.71e-73	219
MS.gene003412.t1	AT5G13120	64.327	171	50	3	5	171	91	254	7.84e-73	220
MS.gene003412.t1	AT3G62030	62.500	168	55	2	5	171	95	255	7.65e-71	215
MS.gene003412.t1	AT3G62030	62.500	168	55	2	5	171	96	256	8.07e-71	215
MS.gene003412.t1	AT3G62030	62.500	168	55	2	5	171	149	309	4.41e-70	214
MS.gene003412.t1	AT2G38730	59.064	171	66	3	3	171	31	199	6.55e-67	202
MS.gene003412.t1	AT2G15790	58.960	173	69	2	1	171	1	173	9.64e-66	205
MS.gene003412.t1	AT4G34960	52.976	168	78	1	5	171	48	215	9.03e-61	188
MS.gene003412.t1	AT3G22920	54.545	176	68	5	1	172	1	168	2.03e-59	185
MS.gene003412.t1	AT4G32420	50.888	169	82	1	3	170	6	174	5.43e-51	174
MS.gene003412.t1	AT4G32420	50.888	169	82	1	3	170	6	174	5.43e-51	174
MS.gene003412.t1	AT4G32420	50.888	169	82	1	3	170	6	174	5.43e-51	174
MS.gene003412.t1	AT4G32420	50.888	169	82	1	3	170	6	174	5.43e-51	174
MS.gene003412.t1	AT4G32420	51.592	157	75	1	3	158	6	162	1.06e-47	165
MS.gene003412.t1	AT4G34960	54.032	124	57	0	5	128	48	171	5.34e-47	151
MS.gene003412.t1	AT2G36130	45.399	163	70	6	2	163	8	152	5.35e-36	123
MS.gene003412.t1	AT1G01940	48.252	143	58	5	18	157	10	139	3.16e-33	115
MS.gene003412.t1	AT3G44600	48.980	147	59	6	18	162	485	617	5.82e-33	123
MS.gene003412.t1	AT5G67530	49.265	136	57	4	18	152	353	477	2.78e-29	112
MS.gene003412.t1	AT4G33060	46.400	125	54	5	18	140	22	135	9.26e-25	99.8
MS.gene003412.t1	AT1G53720	36.879	141	69	5	18	149	10	139	2.82e-18	80.9
MS.gene003412.t1	AT1G53720	36.879	141	69	5	18	149	10	139	5.33e-18	80.9

Find 63 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACTGAGATCCGTTGGTTCC+TGG	0.326133	4.1:-28533494	None:intergenic
CCTCCCTGACACATGAAGTT+AGG	0.347806	4.1:-28533353	None:intergenic
TTCGCCATGGAGAGGATTCC+AGG	0.356185	4.1:-28533464	None:intergenic
ATCAAGAAGCACACCGGTCC+TGG	0.379174	4.1:+28533446	MS.gene003412:CDS
GACGGAAAGCACGTCGTATT+CGG	0.401729	4.1:+28533548	MS.gene003412:CDS
CTAAGAGAGTTGACCGCAAT+CGG	0.418363	4.1:-28533657	None:intergenic
CGGTCAGGTTGTTGAAGGTC+TGG	0.429912	4.1:+28533568	MS.gene003412:CDS
CCGCAATCGGCGATCACGAC+TGG	0.431471	4.1:-28533644	None:intergenic
TCCATGGCGAACGCTGGTCC+AGG	0.445948	4.1:+28533476	MS.gene003412:CDS
GAGAAAGTCGGATCTGGATC+TGG	0.446422	4.1:+28533608	MS.gene003412:CDS
GCTCTCTGCACCGGCGAGAA+AGG	0.448573	4.1:+28533272	MS.gene003412:CDS
GAGATCGAGAAAGTCGGATC+TGG	0.448823	4.1:+28533602	MS.gene003412:CDS
GTCATATCGAAGAAAACCTT+AGG	0.459890	4.1:-28533170	None:intergenic
GGCGATCACGACTGGCTTCG+AGG	0.461154	4.1:-28533636	None:intergenic
GATCCCTAACTTCATGTGTC+AGG	0.471623	4.1:+28533349	MS.gene003412:CDS
CTCCCTGACACATGAAGTTA+GGG	0.480325	4.1:-28533352	None:intergenic
TTCACCAACGGAAACGGTAC+CGG	0.483169	4.1:+28533380	MS.gene003412:CDS
GTATTCGGTCAGGTTGTTGA+AGG	0.496891	4.1:+28533563	MS.gene003412:CDS
GTCGAGCCACTCTGTCTTAG+CGG	0.505495	4.1:-28533528	None:intergenic
GCCTCCGGTACCGTTTCCGT+TGG	0.509269	4.1:-28533384	None:intergenic
TCCGTAGATCGATTCGCCTC+CGG	0.512965	4.1:-28533399	None:intergenic
CATGGAGAGGATTCCAGGAC+CGG	0.517090	4.1:-28533459	None:intergenic
ACCGTCGGTGGCAACCCTGC+CGG	0.520375	4.1:+28533191	MS.gene003412:CDS
AAAGCACGTCGTATTCGGTC+AGG	0.529263	4.1:+28533553	MS.gene003412:CDS
ATCCTCTCCATGGCGAACGC+TGG	0.529724	4.1:+28533470	MS.gene003412:CDS
TCGAAGATGATACGTCCGGC+AGG	0.533363	4.1:-28533206	None:intergenic
GGTGATTTCACCAACGGAAA+CGG	0.538147	4.1:+28533374	MS.gene003412:CDS
TCCTGGACCAGCGTTCGCCA+TGG	0.539402	4.1:-28533477	None:intergenic
GGCGGTGCGGGGAGTGACAT+CGG	0.547631	4.1:-28533237	None:intergenic
TGCAACCATGTCTAACCCTA+AGG	0.552767	4.1:+28533154	None:intergenic
GACGAAGAACTGAGATCCGT+TGG	0.556022	4.1:-28533501	None:intergenic
GGCAAACCACTCCACTTCAA+AGG	0.560943	4.1:+28533308	MS.gene003412:CDS
GCGGCCGACTCCTTTCTCGC+CGG	0.566187	4.1:-28533282	None:intergenic
ACCGGAGGCGAATCGATCTA+CGG	0.566609	4.1:+28533398	MS.gene003412:CDS
ATCCCTAACTTCATGTGTCA+GGG	0.567025	4.1:+28533350	MS.gene003412:CDS
TCCGGCAGGGTTGCCACCGA+CGG	0.568975	4.1:-28533192	None:intergenic
GAAGATCCTTTGAAGTGGAG+TGG	0.570002	4.1:-28533314	None:intergenic
GTTAGGGATCACACGGTGGA+AGG	0.570770	4.1:-28533336	None:intergenic
AATTTCCGTGCTCTCTGCAC+CGG	0.573568	4.1:+28533263	MS.gene003412:CDS
TCATATCGAAGAAAACCTTA+GGG	0.575419	4.1:-28533169	None:intergenic
TCTCGCCGGTGCAGAGAGCA+CGG	0.577434	4.1:-28533268	None:intergenic
AAGCTCGAAGATGATACGTC+CGG	0.581315	4.1:-28533210	None:intergenic
TTCTTCGATATGACCGTCGG+TGG	0.589305	4.1:+28533179	MS.gene003412:CDS
CGGTCCTGGAATCCTCTCCA+TGG	0.589882	4.1:+28533460	MS.gene003412:CDS
TGAAGGTCTGGAAGTTGTGA+AGG	0.598033	4.1:+28533580	MS.gene003412:CDS
GAGAAAGGAGTCGGCCGCAG+CGG	0.599935	4.1:+28533287	MS.gene003412:CDS
GGAAGGAAGATCCTTTGAAG+TGG	0.600412	4.1:-28533319	None:intergenic
AGTGGAGTGGTTTGCCGCTG+CGG	0.604904	4.1:-28533301	None:intergenic
AACGCTGGTCCAGGAACCAA+CGG	0.606157	4.1:+28533485	MS.gene003412:CDS
GACCAGCGTTCGCCATGGAG+AGG	0.613724	4.1:-28533472	None:intergenic
TGCACCGGCGAGAAAGGAGT+CGG	0.616021	4.1:+28533278	MS.gene003412:CDS
CAGGGAGGTGATTTCACCAA+CGG	0.616760	4.1:+28533368	MS.gene003412:CDS
GTGAAGGAGATCGAGAAAGT+CGG	0.624253	4.1:+28533596	MS.gene003412:CDS
CGAAGATGATACGTCCGGCA+GGG	0.628794	4.1:-28533205	None:intergenic
GAAAACCTTAGGGTTAGACA+TGG	0.661297	4.1:-28533159	None:intergenic
GCTAAGACAGAGTGGCTCGA+CGG	0.664017	4.1:+28533530	MS.gene003412:CDS
ACATGAAGTTAGGGATCACA+CGG	0.667907	4.1:-28533343	None:intergenic
ACCAACGGAAACGGTACCGG+AGG	0.677978	4.1:+28533383	MS.gene003412:CDS
AATTTCATCAAGAAGCACAC+CGG	0.680067	4.1:+28533440	MS.gene003412:CDS
CCAGTCGTGATCGCCGATTG+CGG	0.685460	4.1:+28533644	MS.gene003412:CDS
CCTAACTTCATGTGTCAGGG+AGG	0.694044	4.1:+28533353	MS.gene003412:CDS
TCTGCACCGCTAAGACAGAG+TGG	0.718339	4.1:+28533522	MS.gene003412:CDS
TGAAGTTAGGGATCACACGG+TGG	0.759029	4.1:-28533340	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	TCATATCGAAGAAAACCTTA+GGG	-	chr4.1:28533172-28533191	None:intergenic	30.0%
	GTCATATCGAAGAAAACCTT+AGG	-	chr4.1:28533173-28533192	None:intergenic	35.0%
!	AATTTCATCAAGAAGCACAC+CGG	+	chr4.1:28533440-28533459	MS.gene003412:CDS	35.0%
	ACATGAAGTTAGGGATCACA+CGG	-	chr4.1:28533346-28533365	None:intergenic	40.0%
	ATCCCTAACTTCATGTGTCA+GGG	+	chr4.1:28533350-28533369	MS.gene003412:CDS	40.0%
!	GTTTTCTTCGATATGACCGT+CGG	+	chr4.1:28533176-28533195	MS.gene003412:CDS	40.0%
	AAGCTCGAAGATGATACGTC+CGG	-	chr4.1:28533213-28533232	None:intergenic	45.0%
	CTAAGAGAGTTGACCGCAAT+CGG	-	chr4.1:28533660-28533679	None:intergenic	45.0%
	CTCCCTGACACATGAAGTTA+GGG	-	chr4.1:28533355-28533374	None:intergenic	45.0%
	GATCCCTAACTTCATGTGTC+AGG	+	chr4.1:28533349-28533368	MS.gene003412:CDS	45.0%
	GGTGATTTCACCAACGGAAA+CGG	+	chr4.1:28533374-28533393	MS.gene003412:CDS	45.0%
	GTGAAGGAGATCGAGAAAGT+CGG	+	chr4.1:28533596-28533615	MS.gene003412:CDS	45.0%
	TGAAGGTCTGGAAGTTGTGA+AGG	+	chr4.1:28533580-28533599	MS.gene003412:CDS	45.0%
!	GGAAGGAAGATCCTTTGAAG+TGG	-	chr4.1:28533322-28533341	None:intergenic	45.0%
!	GTATTCGGTCAGGTTGTTGA+AGG	+	chr4.1:28533563-28533582	MS.gene003412:CDS	45.0%
!!	GAAGATCCTTTGAAGTGGAG+TGG	-	chr4.1:28533317-28533336	None:intergenic	45.0%
!!	GCAGAGAGCACGGAAATTTT+CGG	-	chr4.1:28533261-28533280	None:intergenic	45.0%
	AAAGCACGTCGTATTCGGTC+AGG	+	chr4.1:28533553-28533572	MS.gene003412:CDS	50.0%
	AATTTCCGTGCTCTCTGCAC+CGG	+	chr4.1:28533263-28533282	MS.gene003412:CDS	50.0%
	CAGGGAGGTGATTTCACCAA+CGG	+	chr4.1:28533368-28533387	MS.gene003412:CDS	50.0%
	CCTAACTTCATGTGTCAGGG+AGG	+	chr4.1:28533353-28533372	MS.gene003412:CDS	50.0%
	CCTCCCTGACACATGAAGTT+AGG	-	chr4.1:28533356-28533375	None:intergenic	50.0%
	GACGAAGAACTGAGATCCGT+TGG	-	chr4.1:28533504-28533523	None:intergenic	50.0%
	GAGAAAGTCGGATCTGGATC+TGG	+	chr4.1:28533608-28533627	MS.gene003412:CDS	50.0%
	GAGATCGAGAAAGTCGGATC+TGG	+	chr4.1:28533602-28533621	MS.gene003412:CDS	50.0%
	GGCAAACCACTCCACTTCAA+AGG	+	chr4.1:28533308-28533327	MS.gene003412:CDS	50.0%
	TGAAGTTAGGGATCACACGG+TGG	-	chr4.1:28533343-28533362	None:intergenic	50.0%
	TTCACCAACGGAAACGGTAC+CGG	+	chr4.1:28533380-28533399	MS.gene003412:CDS	50.0%
	TTCTTCGATATGACCGTCGG+TGG	+	chr4.1:28533179-28533198	MS.gene003412:CDS	50.0%
!	GACGGAAAGCACGTCGTATT+CGG	+	chr4.1:28533548-28533567	MS.gene003412:CDS	50.0%
!!	AACTGAGATCCGTTGGTTCC+TGG	-	chr4.1:28533497-28533516	None:intergenic	50.0%
!!	GAGAGCACGGAAATTTTCGG+CGG	-	chr4.1:28533258-28533277	None:intergenic	50.0%
	AACGCTGGTCCAGGAACCAA+CGG	+	chr4.1:28533485-28533504	MS.gene003412:CDS	55.0%
	ACCGGAGGCGAATCGATCTA+CGG	+	chr4.1:28533398-28533417	MS.gene003412:CDS	55.0%
	CATGGAGAGGATTCCAGGAC+CGG	-	chr4.1:28533462-28533481	None:intergenic	55.0%
	CGAAGATGATACGTCCGGCA+GGG	-	chr4.1:28533208-28533227	None:intergenic	55.0%
	GCTAAGACAGAGTGGCTCGA+CGG	+	chr4.1:28533530-28533549	MS.gene003412:CDS	55.0%
	GTCGAGCCACTCTGTCTTAG+CGG	-	chr4.1:28533531-28533550	None:intergenic	55.0%
	GTTAGGGATCACACGGTGGA+AGG	-	chr4.1:28533339-28533358	None:intergenic	55.0%
	TCGAAGATGATACGTCCGGC+AGG	-	chr4.1:28533209-28533228	None:intergenic	55.0%
	TCTGCACCGCTAAGACAGAG+TGG	+	chr4.1:28533522-28533541	MS.gene003412:CDS	55.0%
	TTCGCCATGGAGAGGATTCC+AGG	-	chr4.1:28533467-28533486	None:intergenic	55.0%
!	ACGGAAATTTTCGGCGGTGC+GGG	-	chr4.1:28533252-28533271	None:intergenic	55.0%
!	ATCAAGAAGCACACCGGTCC+TGG	+	chr4.1:28533446-28533465	MS.gene003412:CDS	55.0%
!	CACGGAAATTTTCGGCGGTG+CGG	-	chr4.1:28533253-28533272	None:intergenic	55.0%
!	CGGTCAGGTTGTTGAAGGTC+TGG	+	chr4.1:28533568-28533587	MS.gene003412:CDS	55.0%
!!	TCCGTAGATCGATTCGCCTC+CGG	-	chr4.1:28533402-28533421	None:intergenic	55.0%
	ATCCTCTCCATGGCGAACGC+TGG	+	chr4.1:28533470-28533489	MS.gene003412:CDS	60.0%
	CGGTCCTGGAATCCTCTCCA+TGG	+	chr4.1:28533460-28533479	MS.gene003412:CDS	60.0%
!	ACCAACGGAAACGGTACCGG+AGG	+	chr4.1:28533383-28533402	MS.gene003412:CDS	60.0%
!	AGTGGAGTGGTTTGCCGCTG+CGG	-	chr4.1:28533304-28533323	None:intergenic	60.0%
!	CCAGTCGTGATCGCCGATTG+CGG	+	chr4.1:28533644-28533663	MS.gene003412:CDS	60.0%
!	CGGAAATTTTCGGCGGTGCG+GGG	-	chr4.1:28533251-28533270	None:intergenic	60.0%
!	TGCACCGGCGAGAAAGGAGT+CGG	+	chr4.1:28533278-28533297	MS.gene003412:CDS	60.0%
	CCGCAATCGGCGATCACGAC+TGG	-	chr4.1:28533647-28533666	None:intergenic	65.0%
	GACCAGCGTTCGCCATGGAG+AGG	-	chr4.1:28533475-28533494	None:intergenic	65.0%
	GAGAAAGGAGTCGGCCGCAG+CGG	+	chr4.1:28533287-28533306	MS.gene003412:CDS	65.0%
	GCCTCCGGTACCGTTTCCGT+TGG	-	chr4.1:28533387-28533406	None:intergenic	65.0%
	TCCATGGCGAACGCTGGTCC+AGG	+	chr4.1:28533476-28533495	MS.gene003412:CDS	65.0%
	TCCTGGACCAGCGTTCGCCA+TGG	-	chr4.1:28533480-28533499	None:intergenic	65.0%
	TCTCGCCGGTGCAGAGAGCA+CGG	-	chr4.1:28533271-28533290	None:intergenic	65.0%
!	GCTCTCTGCACCGGCGAGAA+AGG	+	chr4.1:28533272-28533291	MS.gene003412:CDS	65.0%
!!	GGCGATCACGACTGGCTTCG+AGG	-	chr4.1:28533639-28533658	None:intergenic	65.0%
	ACCGTCGGTGGCAACCCTGC+CGG	+	chr4.1:28533191-28533210	MS.gene003412:CDS	70.0%
	GGCGGTGCGGGGAGTGACAT+CGG	-	chr4.1:28533240-28533259	None:intergenic	70.0%
	TCCGGCAGGGTTGCCACCGA+CGG	-	chr4.1:28533195-28533214	None:intergenic	70.0%
!	GCGGCCGACTCCTTTCTCGC+CGG	-	chr4.1:28533285-28533304	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	28533161	28533679	28533161	ID=MS.gene003412
chr4.1	mRNA	28533161	28533679	28533161	ID=MS.gene003412.t1;Parent=MS.gene003412
chr4.1	exon	28533161	28533679	28533161	ID=MS.gene003412.t1.exon1;Parent=MS.gene003412.t1
chr4.1	CDS	28533161	28533679	28533161	ID=cds.MS.gene003412.t1;Parent=MS.gene003412.t1

Gene Sequence

>MS.gene003412

ATGTCTAACCCTAAGGTTTTCTTCGATATGACCGTCGGTGGCAACCCTGCCGGACGTATCATCTTCGAGCTTTTCGCCGATGTCACTCCCCGCACCGCCGAAAATTTCCGTGCTCTCTGCACCGGCGAGAAAGGAGTCGGCCGCAGCGGCAAACCACTCCACTTCAAAGGATCTTCCTTCCACCGTGTGATCCCTAACTTCATGTGTCAGGGAGGTGATTTCACCAACGGAAACGGTACCGGAGGCGAATCGATCTACGGATCAAAGTTCGCTGATGAGAATTTCATCAAGAAGCACACCGGTCCTGGAATCCTCTCCATGGCGAACGCTGGTCCAGGAACCAACGGATCTCAGTTCTTCGTCTGCACCGCTAAGACAGAGTGGCTCGACGGAAAGCACGTCGTATTCGGTCAGGTTGTTGAAGGTCTGGAAGTTGTGAAGGAGATCGAGAAAGTCGGATCTGGATCTGGAAAGACCTCGAAGCCAGTCGTGATCGCCGATTGCGGTCAACTCTCTTAG

Protein sequence

>MS.gene003412.t1

MSNPKVFFDMTVGGNPAGRIIFELFADVTPRTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTNGNGTGGESIYGSKFADENFIKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGLEVVKEIEKVGSGSGKTSKPVVIADCGQLS