AlfalfaGEDB | MS.gene68752

M. sativa cultivar XinJiangDaYe / MS.gene68752

KEGG: K01802
GO: GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564
PFAM: PF00160.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68752.t1	XP_003604030.1	93.7	191	9	2	1	188	1	191	3.50E-96	360.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68752.t1	Q8W171	85.4	171	25	0	8	178	2	172	4.9e-86	318.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68752.t1	G7J8H2	93.7	191	9	2	1	188	1	191	2.6e-96	360.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049232	MS.gene68752	0.80355	3.30E-49	-1.69E-46
MS.gene050504	MS.gene68752	0.806897	6.58E-50	-1.69E-46
MS.gene050518	MS.gene68752	0.825866	3.71E-54	-1.69E-46
MS.gene050612	MS.gene68752	0.80659	7.64E-50	-1.69E-46
MS.gene050876	MS.gene68752	0.817249	3.64E-52	-1.69E-46
MS.gene050986	MS.gene68752	0.820383	7.06E-53	-1.69E-46
MS.gene055634	MS.gene68752	0.832739	7.96E-56	-1.69E-46
MS.gene055776	MS.gene68752	0.837803	4.19E-57	-1.69E-46
MS.gene055849	MS.gene68752	0.813317	2.72E-51	-1.69E-46
MS.gene056510	MS.gene68752	0.812257	4.64E-51	-1.69E-46
MS.gene057765	MS.gene68752	0.803428	3.50E-49	-1.69E-46
MS.gene057872	MS.gene68752	0.807964	3.91E-50	-1.69E-46
MS.gene058719	MS.gene68752	0.822291	2.56E-53	-1.69E-46
MS.gene059865	MS.gene68752	0.801443	8.98E-49	-1.69E-46
MS.gene060703	MS.gene68752	0.807212	5.64E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene68752	MS.gene052269	PPI
MS.gene39668	MS.gene68752	PPI
MS.gene88451	MS.gene68752	PPI
MS.gene68752	MS.gene019366	PPI
MS.gene025980	MS.gene68752	PPI
MS.gene68752	MS.gene72809	PPI
MS.gene68752	MS.gene28963	PPI
MS.gene68752	MS.gene23663	PPI
MS.gene68752	MS.gene47195	PPI
MS.gene68752	MS.gene063787	PPI
MS.gene68752	MS.gene007179	PPI
MS.gene68752	MS.gene61767	PPI
MS.gene68752	MS.gene82121	PPI
MS.gene68752	MS.gene23546	PPI
MS.gene68752	MS.gene025980	PPI
MS.gene68752	MS.gene028111	PPI
MS.gene68752	MS.gene014216	PPI
MS.gene68752	MS.gene024514	PPI
MS.gene68752	MS.gene063104	PPI
MS.gene68153	MS.gene68752	PPI
MS.gene68752	MS.gene051153	PPI
MS.gene68752	MS.gene88451	PPI
MS.gene68752	MS.gene55545	PPI
MS.gene68752	MS.gene39668	PPI
MS.gene68752	MS.gene22872	PPI
MS.gene68752	MS.gene003412	PPI
MS.gene68752	MS.gene048458	PPI
MS.gene68752	MS.gene04515	PPI
MS.gene68752	MS.gene074045	PPI
MS.gene68752	MS.gene052266	PPI
MS.gene68752	MS.gene68153	PPI
MS.gene68752	MS.gene04526	PPI
MS.gene68752	MS.gene050574	PPI
MS.gene68752	MS.gene050281	PPI
MS.gene68752	MS.gene83474	PPI
MS.gene68752	MS.gene28703	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68752.t1	MTR_3g117750	97.861	187	3	1	3	188	5	191	2.08e-133	371
MS.gene68752.t1	MTR_4g075290	86.471	170	23	0	9	178	3	172	1.12e-109	310
MS.gene68752.t1	MTR_7g116340	76.471	170	40	0	9	178	3	172	4.75e-97	278
MS.gene68752.t1	MTR_3g463900	67.665	167	54	0	11	177	35	201	1.79e-79	235
MS.gene68752.t1	MTR_3g070500	62.921	178	66	0	1	178	55	232	4.38e-79	235
MS.gene68752.t1	MTR_7g095750	63.743	171	61	1	9	178	6	176	9.26e-75	236
MS.gene68752.t1	MTR_8g079690	58.757	177	71	2	8	182	2	178	8.20e-68	211
MS.gene68752.t1	MTR_1g117010	60.819	171	56	3	11	177	78	241	2.39e-67	206
MS.gene68752.t1	MTR_1g117010	60.819	171	56	3	11	177	78	241	2.39e-67	206
MS.gene68752.t1	MTR_8g040180	58.857	175	67	4	6	177	13	185	2.18e-66	201
MS.gene68752.t1	MTR_1g085560	66.438	146	42	1	11	156	86	224	3.76e-66	203
MS.gene68752.t1	MTR_7g110980	58.523	176	55	3	11	180	97	260	7.89e-66	202
MS.gene68752.t1	MTR_4g086760	57.386	176	69	3	11	182	5	178	9.47e-64	199
MS.gene68752.t1	MTR_4g086760	57.386	176	69	3	11	182	5	178	1.79e-63	200
MS.gene68752.t1	MTR_4g086760	57.386	176	69	3	11	182	5	178	1.85e-63	199
MS.gene68752.t1	MTR_3g070500	65.672	134	46	0	1	134	55	188	6.69e-61	187
MS.gene68752.t1	MTR_4g073650	53.757	173	79	1	6	177	42	214	1.46e-60	188
MS.gene68752.t1	MTR_3g107660	51.445	173	83	1	9	180	9	181	7.78e-52	178
MS.gene68752.t1	MTR_3g070500	64.220	109	39	0	1	109	55	163	4.24e-46	149
MS.gene68752.t1	MTR_3g070500	63.889	108	39	0	1	108	55	162	7.85e-46	149
MS.gene68752.t1	MTR_1g011980	48.555	173	87	2	9	180	6	177	2.96e-44	156
MS.gene68752.t1	MTR_2g085075	52.027	148	55	5	23	168	470	603	2.81e-35	130
MS.gene68752.t1	MTR_7g105220	50.360	139	53	4	23	158	18	143	5.32e-35	121
MS.gene68752.t1	MTR_8g036015	48.611	144	58	5	23	163	9	139	4.11e-33	116
MS.gene68752.t1	MTR_3g085705	50.877	114	51	3	43	156	7	115	1.79e-29	105
MS.gene68752.t1	MTR_5g015500	48.529	136	58	4	24	158	314	438	1.94e-28	110
MS.gene68752.t1	MTR_5g015500	48.529	136	58	4	24	158	354	478	3.31e-28	110
MS.gene68752.t1	MTR_6g084140	38.824	170	83	6	23	182	9	167	1.13e-22	94.7
MS.gene68752.t1	MTR_6g084140	38.824	170	83	6	23	182	26	184	1.19e-22	94.7
MS.gene68752.t1	MTR_8g442420	38.235	170	84	6	23	182	9	167	1.36e-21	91.7
MS.gene68752.t1	MTR_2g023120	42.742	124	58	5	24	145	22	134	9.12e-18	80.5
MS.gene68752.t1	MTR_1g094065	35.897	156	66	7	24	170	89	219	3.17e-14	68.6
MS.gene68752.t1	MTR_1g035360	29.299	157	93	5	24	177	88	229	1.95e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68752.t1	AT2G16600	83.529	170	28	0	9	178	4	173	6.22e-106	301
MS.gene68752.t1	AT4G38740	80.473	169	33	0	10	178	4	172	2.44e-101	290
MS.gene68752.t1	AT2G21130	78.824	170	36	0	9	178	4	173	2.06e-100	287
MS.gene68752.t1	AT4G34870	79.412	170	35	0	9	178	3	172	1.52e-99	285
MS.gene68752.t1	AT3G56070	72.515	171	47	0	9	179	3	173	1.45e-90	262
MS.gene68752.t1	AT3G56070	72.515	171	47	0	9	179	3	173	1.45e-90	262
MS.gene68752.t1	AT2G16600	71.765	170	26	1	9	178	4	151	7.67e-84	244
MS.gene68752.t1	AT2G29960	67.066	167	55	0	11	177	33	199	1.58e-78	233
MS.gene68752.t1	AT2G29960	67.066	167	55	0	11	177	33	199	1.58e-78	233
MS.gene68752.t1	AT3G63400	66.667	171	56	1	9	178	6	176	8.82e-77	235
MS.gene68752.t1	AT5G58710	65.868	167	57	0	11	177	36	202	1.56e-76	228
MS.gene68752.t1	AT3G63400	66.667	171	56	1	9	178	6	176	4.76e-75	235
MS.gene68752.t1	AT3G63400	66.667	171	56	1	9	178	6	176	4.76e-75	235
MS.gene68752.t1	AT3G63400	66.667	171	56	1	9	178	6	176	4.76e-75	235
MS.gene68752.t1	AT5G13120	62.983	181	56	3	1	177	77	250	2.60e-74	224
MS.gene68752.t1	AT5G13120	62.983	181	56	3	1	177	81	254	4.62e-74	224
MS.gene68752.t1	AT3G55920	61.905	168	64	0	11	178	60	227	3.25e-73	220
MS.gene68752.t1	AT2G29960	62.275	167	53	1	11	177	33	189	2.07e-69	209
MS.gene68752.t1	AT3G62030	58.989	178	65	2	4	180	88	258	8.05e-69	210
MS.gene68752.t1	AT3G62030	58.989	178	65	2	4	180	89	259	8.96e-69	210
MS.gene68752.t1	AT3G62030	58.989	178	65	2	4	180	142	312	3.61e-68	210
MS.gene68752.t1	AT2G15790	60.920	174	66	2	11	182	5	178	5.58e-65	204
MS.gene68752.t1	AT2G38730	58.857	175	67	4	6	177	27	199	6.91e-65	198
MS.gene68752.t1	AT4G34960	54.070	172	78	1	11	181	48	219	2.00e-60	188
MS.gene68752.t1	AT3G22920	53.143	175	70	5	9	179	3	169	5.91e-54	171
MS.gene68752.t1	AT4G34960	55.645	124	55	0	11	134	48	171	8.60e-46	149
MS.gene68752.t1	AT4G32420	47.929	169	87	1	9	176	6	174	9.86e-46	160
MS.gene68752.t1	AT4G32420	47.929	169	87	1	9	176	6	174	9.86e-46	160
MS.gene68752.t1	AT4G32420	47.929	169	87	1	9	176	6	174	9.86e-46	160
MS.gene68752.t1	AT4G32420	47.929	169	87	1	9	176	6	174	9.86e-46	160
MS.gene68752.t1	AT4G32420	48.408	157	80	1	9	164	6	162	2.30e-42	151
MS.gene68752.t1	AT2G36130	48.649	148	62	5	23	169	18	152	1.76e-36	125
MS.gene68752.t1	AT3G44600	51.429	140	54	4	23	160	484	611	6.44e-34	126
MS.gene68752.t1	AT1G01940	48.252	143	60	5	23	163	9	139	7.07e-33	115
MS.gene68752.t1	AT5G67530	45.806	155	65	6	7	158	339	477	7.00e-28	109
MS.gene68752.t1	AT4G33060	45.600	125	55	5	24	146	22	135	1.18e-24	100
MS.gene68752.t1	AT1G53720	38.028	142	68	5	23	155	9	139	1.26e-20	87.8
MS.gene68752.t1	AT1G53720	38.028	142	68	5	23	155	9	139	2.14e-20	88.2

Find 83 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAATTCTCGTCGGCGAATT+TGG	0.117790	3.2:-92940644	None:intergenic
TGGGATTGGGGTTGGGGATG+GGG	0.189257	3.2:-92940372	None:intergenic
TTGGGATTGGGGTTGGGGAT+GGG	0.254630	3.2:-92940373	None:intergenic
AGACTTTGGGATTGGGGTTG+GGG	0.279401	3.2:-92940378	None:intergenic
AAGACTTTGGGATTGGGGTT+GGG	0.281079	3.2:-92940379	None:intergenic
GAGAAAGTTGGGTCCGGTTC+GGG	0.294795	3.2:+92940829	MS.gene68752:CDS
TTTGGGATTGGGGTTGGGGA+TGG	0.340234	3.2:-92940374	None:intergenic
CTCTCCACCGGTACCATTAC+CGG	0.380312	3.2:-92940608	None:intergenic
GGCGAATTTGGACCCGTAGA+TGG	0.381308	3.2:-92940632	None:intergenic
TCGAAGAAGACTTTGGGATT+GGG	0.389727	3.2:-92940385	None:intergenic
GAAGACTTTGGGATTGGGGT+TGG	0.396057	3.2:-92940380	None:intergenic
TGAGAAAGTTGGGTCCGGTT+CGG	0.405741	3.2:+92940828	MS.gene68752:CDS
GTGAAAGAGATTGAGAAAGT+TGG	0.416986	3.2:+92940817	MS.gene68752:CDS
ATGGTAGCTATATATGTTGT+TGG	0.423422	3.2:-92940915	None:intergenic
GTCGAAGAAGACTTTGGGAT+TGG	0.424528	3.2:-92940386	None:intergenic
GTCATGTCGAAGAAGACTTT+GGG	0.428350	3.2:-92940391	None:intergenic
GCAGAGTGCACGGAAGTTAT+CGG	0.432521	3.2:-92940479	None:intergenic
TGGTGAGGTGGTTGAAGGAA+TGG	0.433417	3.2:+92940789	MS.gene68752:CDS
GCGAAGACGGAGTGGCTTGA+TGG	0.435031	3.2:+92940751	MS.gene68752:CDS
CGAAGAAGACTTTGGGATTG+GGG	0.456798	3.2:-92940384	None:intergenic
CCTCCTTGACACATGAAATC+AGG	0.460761	3.2:-92940574	None:intergenic
GGTCATGTCGAAGAAGACTT+TGG	0.463837	3.2:-92940392	None:intergenic
GCACTCTGCACCGGGGAGAA+AGG	0.471854	3.2:+92940493	MS.gene68752:CDS
ACCGGTGGAGAGTCCATCTA+CGG	0.473790	3.2:+92940619	MS.gene68752:CDS
AACTTCCGTGCACTCTGCAC+CGG	0.478449	3.2:+92940484	MS.gene68752:CDS
AGGTCCAGGTGTTCTTTCAA+TGG	0.486279	3.2:+92940681	MS.gene68752:CDS
CTTCATATGCACGGCGAAGA+CGG	0.491522	3.2:+92940738	MS.gene68752:CDS
TGAAAGAGATTGAGAAAGTT+GGG	0.494450	3.2:+92940818	MS.gene68752:CDS
GTTCTTTCAATGGCGAATGC+GGG	0.507071	3.2:+92940691	MS.gene68752:CDS
CGAAGACGGAGTGGCTTGAT+GGG	0.510239	3.2:+92940752	MS.gene68752:CDS
GGTGACTTCACCGCCGGTAA+TGG	0.512626	3.2:+92940595	MS.gene68752:CDS
GATCATTATCATCAGAGAGT+TGG	0.513860	3.2:-92940888	None:intergenic
ATCAAGACCCACACAGGTCC+AGG	0.524358	3.2:+92940667	MS.gene68752:CDS
CATGACCGTCGGAGACGAAC+CGG	0.524784	3.2:+92940408	MS.gene68752:CDS
ACTTCCGTGCACTCTGCACC+GGG	0.526298	3.2:+92940485	MS.gene68752:CDS
GGAAGATAGAGCCTTTGTAA+TGG	0.527764	3.2:-92940540	None:intergenic
GAGATTGAGAAAGTTGGGTC+CGG	0.536951	3.2:+92940823	MS.gene68752:CDS
TTCGCCATTGAAAGAACACC+TGG	0.544494	3.2:-92940685	None:intergenic
TCTCCCCGGTGCAGAGTGCA+CGG	0.546941	3.2:-92940489	None:intergenic
GAACTGTGATCCATTCGTAC+CGG	0.549331	3.2:-92940716	None:intergenic
AACTGTGATCCATTCGTACC+GGG	0.549830	3.2:-92940715	None:intergenic
AATGCGGGACCCGGTACGAA+TGG	0.554826	3.2:+92940706	MS.gene68752:CDS
TGTTCTTTCAATGGCGAATG+CGG	0.558234	3.2:+92940690	MS.gene68752:CDS
TTCACCGCCGGTAATGGTAC+CGG	0.561434	3.2:+92940601	MS.gene68752:CDS
GTCTTCTTCGACATGACCGT+CGG	0.574777	3.2:+92940397	MS.gene68752:CDS
GGCGGTGAGAGGAGTGGTGT+CGG	0.577204	3.2:-92940458	None:intergenic
TCAATGGCGAATGCGGGACC+CGG	0.581965	3.2:+92940697	MS.gene68752:CDS
TCCGACCGGTTCGTCTCCGA+CGG	0.586188	3.2:-92940413	None:intergenic
GGTGGTTGAAGGAATGGAGG+TGG	0.586389	3.2:+92940795	MS.gene68752:CDS
CCGCAGTCAGCAATAACCAC+CGG	0.587692	3.2:-92940865	None:intergenic
TTCGGGGAAAACATCAAAGC+CGG	0.592489	3.2:+92940846	MS.gene68752:CDS
ACCGGTCGGACGTATCGTCA+TGG	0.600041	3.2:+92940426	MS.gene68752:CDS
CGGAAGTTATCGGCGGTGAG+AGG	0.605286	3.2:-92940469	None:intergenic
AGAAAGTTGGGTCCGGTTCG+GGG	0.607170	3.2:+92940830	MS.gene68752:CDS
ATAGAGCCTTTGTAATGGAG+AGG	0.607462	3.2:-92940535	None:intergenic
CCCGTAGATGGACTCTCCAC+CGG	0.607666	3.2:-92940620	None:intergenic
GCTACCGAGTCCTTTCTCCC+CGG	0.607787	3.2:-92940503	None:intergenic
ATACCTGATTTCATGTGTCA+AGG	0.608102	3.2:+92940571	MS.gene68752:CDS
ATCACAGTTCTTCATATGCA+CGG	0.610600	3.2:+92940729	MS.gene68752:CDS
TGAGGTGGTTGAAGGAATGG+AGG	0.611761	3.2:+92940792	MS.gene68752:CDS
GAGAAAGGACTCGGTAGCAG+TGG	0.612151	3.2:+92940508	MS.gene68752:CDS
CAAGGAGGTGACTTCACCGC+CGG	0.614495	3.2:+92940589	MS.gene68752:CDS
ACCGCCGGTAATGGTACCGG+TGG	0.624217	3.2:+92940604	MS.gene68752:CDS
CCGGTGGAGAGTCCATCTAC+GGG	0.638547	3.2:+92940620	MS.gene68752:CDS
AAGAACACCTGGACCTGTGT+GGG	0.644240	3.2:-92940674	None:intergenic
TCCATGACGATACGTCCGAC+CGG	0.645610	3.2:-92940427	None:intergenic
AATTTCATCAAGACCCACAC+AGG	0.645692	3.2:+92940661	MS.gene68752:CDS
GGCAAGCCTCTCCATTACAA+AGG	0.646729	3.2:+92940529	MS.gene68752:CDS
TGCACCGGGGAGAAAGGACT+CGG	0.648211	3.2:+92940499	MS.gene68752:CDS
GGTCTTGATGAAATTCTCGT+CGG	0.653249	3.2:-92940653	None:intergenic
CCTGATTTCATGTGTCAAGG+AGG	0.663642	3.2:+92940574	MS.gene68752:CDS
GTTATCGGCGGTGAGAGGAG+TGG	0.666243	3.2:-92940464	None:intergenic
TATGCACGGCGAAGACGGAG+TGG	0.669618	3.2:+92940743	MS.gene68752:CDS
TGAAATCAGGTATGACGCGG+TGG	0.671849	3.2:-92940561	None:intergenic
GGGGAAAACATCAAAGCCGG+TGG	0.686265	3.2:+92940849	MS.gene68752:CDS
CCGGTGGTTATTGCTGACTG+CGG	0.692364	3.2:+92940865	MS.gene68752:CDS
GTGGCTTGATGGGAAACATG+TGG	0.698636	3.2:+92940762	MS.gene68752:CDS
ACCGTCGGAGACGAACCGGT+CGG	0.705667	3.2:+92940412	MS.gene68752:CDS
TCCACCGGTACCATTACCGG+CGG	0.707753	3.2:-92940605	None:intergenic
AAAGAACACCTGGACCTGTG+TGG	0.718700	3.2:-92940675	None:intergenic
ACATGAAATCAGGTATGACG+CGG	0.735409	3.2:-92940564	None:intergenic
GAGTGCACGGAAGTTATCGG+CGG	0.736092	3.2:-92940476	None:intergenic
CTTCCGTGCACTCTGCACCG+GGG	0.766706	3.2:+92940486	MS.gene68752:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	TGAAAGAGATTGAGAAAGTT+GGG	+	chr3.2:92940818-92940837	MS.gene68752:CDS	30.0%
	ATACCTGATTTCATGTGTCA+AGG	+	chr3.2:92940571-92940590	MS.gene68752:CDS	35.0%
	ATCACAGTTCTTCATATGCA+CGG	+	chr3.2:92940729-92940748	MS.gene68752:CDS	35.0%
	GATCATTATCATCAGAGAGT+TGG	-	chr3.2:92940891-92940910	None:intergenic	35.0%
	GTGAAAGAGATTGAGAAAGT+TGG	+	chr3.2:92940817-92940836	MS.gene68752:CDS	35.0%
	AATTTCATCAAGACCCACAC+AGG	+	chr3.2:92940661-92940680	MS.gene68752:CDS	40.0%
	ACATGAAATCAGGTATGACG+CGG	-	chr3.2:92940567-92940586	None:intergenic	40.0%
	GGAAGATAGAGCCTTTGTAA+TGG	-	chr3.2:92940543-92940562	None:intergenic	40.0%
	GGTCTTGATGAAATTCTCGT+CGG	-	chr3.2:92940656-92940675	None:intergenic	40.0%
	GTCATGTCGAAGAAGACTTT+GGG	-	chr3.2:92940394-92940413	None:intergenic	40.0%
	TGTTCTTTCAATGGCGAATG+CGG	+	chr3.2:92940690-92940709	MS.gene68752:CDS	40.0%
!	ATAGAGCCTTTGTAATGGAG+AGG	-	chr3.2:92940538-92940557	None:intergenic	40.0%
!	GATGGGAAACATGTGGTTTT+TGG	+	chr3.2:92940769-92940788	MS.gene68752:CDS	40.0%
!!	TCGAAGAAGACTTTGGGATT+GGG	-	chr3.2:92940388-92940407	None:intergenic	40.0%
!!!	GAAACATGTGGTTTTTGGTG+AGG	+	chr3.2:92940774-92940793	MS.gene68752:CDS	40.0%
	AACTGTGATCCATTCGTACC+GGG	-	chr3.2:92940718-92940737	None:intergenic	45.0%
	AGGTCCAGGTGTTCTTTCAA+TGG	+	chr3.2:92940681-92940700	MS.gene68752:CDS	45.0%
	CCTCCTTGACACATGAAATC+AGG	-	chr3.2:92940577-92940596	None:intergenic	45.0%
	CCTGATTTCATGTGTCAAGG+AGG	+	chr3.2:92940574-92940593	MS.gene68752:CDS	45.0%
	GAAATTCTCGTCGGCGAATT+TGG	-	chr3.2:92940647-92940666	None:intergenic	45.0%
	GAACTGTGATCCATTCGTAC+CGG	-	chr3.2:92940719-92940738	None:intergenic	45.0%
	GAGATTGAGAAAGTTGGGTC+CGG	+	chr3.2:92940823-92940842	MS.gene68752:CDS	45.0%
	GGTCATGTCGAAGAAGACTT+TGG	-	chr3.2:92940395-92940414	None:intergenic	45.0%
	GTTCTTTCAATGGCGAATGC+GGG	+	chr3.2:92940691-92940710	MS.gene68752:CDS	45.0%
	TTCGCCATTGAAAGAACACC+TGG	-	chr3.2:92940688-92940707	None:intergenic	45.0%
	TTCGGGGAAAACATCAAAGC+CGG	+	chr3.2:92940846-92940865	MS.gene68752:CDS	45.0%
!	CTTTGATGTTTTCCCCGAAC+CGG	-	chr3.2:92940845-92940864	None:intergenic	45.0%
!!	AAGACTTTGGGATTGGGGTT+GGG	-	chr3.2:92940382-92940401	None:intergenic	45.0%
!!	CGAAGAAGACTTTGGGATTG+GGG	-	chr3.2:92940387-92940406	None:intergenic	45.0%
!!	GTCGAAGAAGACTTTGGGAT+TGG	-	chr3.2:92940389-92940408	None:intergenic	45.0%
!!!	ACATGTGGTTTTTGGTGAGG+TGG	+	chr3.2:92940777-92940796	MS.gene68752:CDS	45.0%
!!!	GTTTTTGGTGAGGTGGTTGA+AGG	+	chr3.2:92940784-92940803	MS.gene68752:CDS	45.0%
	AAAGAACACCTGGACCTGTG+TGG	-	chr3.2:92940678-92940697	None:intergenic	50.0%
	AAGAACACCTGGACCTGTGT+GGG	-	chr3.2:92940677-92940696	None:intergenic	50.0%
	CTTCATATGCACGGCGAAGA+CGG	+	chr3.2:92940738-92940757	MS.gene68752:CDS	50.0%
	GCAGAGTGCACGGAAGTTAT+CGG	-	chr3.2:92940482-92940501	None:intergenic	50.0%
	GGCAAGCCTCTCCATTACAA+AGG	+	chr3.2:92940529-92940548	MS.gene68752:CDS	50.0%
	GTCTTCTTCGACATGACCGT+CGG	+	chr3.2:92940397-92940416	MS.gene68752:CDS	50.0%
	GTGGCTTGATGGGAAACATG+TGG	+	chr3.2:92940762-92940781	MS.gene68752:CDS	50.0%
	TGAAATCAGGTATGACGCGG+TGG	-	chr3.2:92940564-92940583	None:intergenic	50.0%
	TGAGAAAGTTGGGTCCGGTT+CGG	+	chr3.2:92940828-92940847	MS.gene68752:CDS	50.0%
	TGAGGTGGTTGAAGGAATGG+AGG	+	chr3.2:92940792-92940811	MS.gene68752:CDS	50.0%
	TGGTGAGGTGGTTGAAGGAA+TGG	+	chr3.2:92940789-92940808	MS.gene68752:CDS	50.0%
!!	AGACTTTGGGATTGGGGTTG+GGG	-	chr3.2:92940381-92940400	None:intergenic	50.0%
!!	GAAGACTTTGGGATTGGGGT+TGG	-	chr3.2:92940383-92940402	None:intergenic	50.0%
	AACTTCCGTGCACTCTGCAC+CGG	+	chr3.2:92940484-92940503	MS.gene68752:CDS	55.0%
	ACCGGTGGAGAGTCCATCTA+CGG	+	chr3.2:92940619-92940638	MS.gene68752:CDS	55.0%
	ATCAAGACCCACACAGGTCC+AGG	+	chr3.2:92940667-92940686	MS.gene68752:CDS	55.0%
	CCGCAGTCAGCAATAACCAC+CGG	-	chr3.2:92940868-92940887	None:intergenic	55.0%
	CGAAGACGGAGTGGCTTGAT+GGG	+	chr3.2:92940752-92940771	MS.gene68752:CDS	55.0%
	CTCTCCACCGGTACCATTAC+CGG	-	chr3.2:92940611-92940630	None:intergenic	55.0%
	GAGAAAGTTGGGTCCGGTTC+GGG	+	chr3.2:92940829-92940848	MS.gene68752:CDS	55.0%
	GAGTGCACGGAAGTTATCGG+CGG	-	chr3.2:92940479-92940498	None:intergenic	55.0%
	GGCGAATTTGGACCCGTAGA+TGG	-	chr3.2:92940635-92940654	None:intergenic	55.0%
	GGGGAAAACATCAAAGCCGG+TGG	+	chr3.2:92940849-92940868	MS.gene68752:CDS	55.0%
	GGTGGTTGAAGGAATGGAGG+TGG	+	chr3.2:92940795-92940814	MS.gene68752:CDS	55.0%
	TCCATGACGATACGTCCGAC+CGG	-	chr3.2:92940430-92940449	None:intergenic	55.0%
	TTGGGATTGGGGTTGGGGAT+GGG	-	chr3.2:92940376-92940395	None:intergenic	55.0%
!	AGAAAGTTGGGTCCGGTTCG+GGG	+	chr3.2:92940830-92940849	MS.gene68752:CDS	55.0%
!	CCGGTGGTTATTGCTGACTG+CGG	+	chr3.2:92940865-92940884	MS.gene68752:CDS	55.0%
!	GAGAAAGGACTCGGTAGCAG+TGG	+	chr3.2:92940508-92940527	MS.gene68752:CDS	55.0%
!	TTCACCGCCGGTAATGGTAC+CGG	+	chr3.2:92940601-92940620	MS.gene68752:CDS	55.0%
!	TTTGGGATTGGGGTTGGGGA+TGG	-	chr3.2:92940377-92940396	None:intergenic	55.0%
	AATGCGGGACCCGGTACGAA+TGG	+	chr3.2:92940706-92940725	MS.gene68752:CDS	60.0%
	ACCGGTCGGACGTATCGTCA+TGG	+	chr3.2:92940426-92940445	MS.gene68752:CDS	60.0%
	ACTTCCGTGCACTCTGCACC+GGG	+	chr3.2:92940485-92940504	MS.gene68752:CDS	60.0%
	CAAGGAGGTGACTTCACCGC+CGG	+	chr3.2:92940589-92940608	MS.gene68752:CDS	60.0%
	CATGACCGTCGGAGACGAAC+CGG	+	chr3.2:92940408-92940427	MS.gene68752:CDS	60.0%
	CCGGTGGAGAGTCCATCTAC+GGG	+	chr3.2:92940620-92940639	MS.gene68752:CDS	60.0%
	CGGAAGTTATCGGCGGTGAG+AGG	-	chr3.2:92940472-92940491	None:intergenic	60.0%
	GCGAAGACGGAGTGGCTTGA+TGG	+	chr3.2:92940751-92940770	MS.gene68752:CDS	60.0%
	GCTACCGAGTCCTTTCTCCC+CGG	-	chr3.2:92940506-92940525	None:intergenic	60.0%
	GGTGACTTCACCGCCGGTAA+TGG	+	chr3.2:92940595-92940614	MS.gene68752:CDS	60.0%
	GTTATCGGCGGTGAGAGGAG+TGG	-	chr3.2:92940467-92940486	None:intergenic	60.0%
	TATGCACGGCGAAGACGGAG+TGG	+	chr3.2:92940743-92940762	MS.gene68752:CDS	60.0%
	TCAATGGCGAATGCGGGACC+CGG	+	chr3.2:92940697-92940716	MS.gene68752:CDS	60.0%
	TCCACCGGTACCATTACCGG+CGG	-	chr3.2:92940608-92940627	None:intergenic	60.0%
	TGCACCGGGGAGAAAGGACT+CGG	+	chr3.2:92940499-92940518	MS.gene68752:CDS	60.0%
	TGGGATTGGGGTTGGGGATG+GGG	-	chr3.2:92940375-92940394	None:intergenic	60.0%
!	CCCGTAGATGGACTCTCCAC+CGG	-	chr3.2:92940623-92940642	None:intergenic	60.0%
	ACCGTCGGAGACGAACCGGT+CGG	+	chr3.2:92940412-92940431	MS.gene68752:CDS	65.0%
	CTTCCGTGCACTCTGCACCG+GGG	+	chr3.2:92940486-92940505	MS.gene68752:CDS	65.0%
	GCACTCTGCACCGGGGAGAA+AGG	+	chr3.2:92940493-92940512	MS.gene68752:CDS	65.0%
	GGCGGTGAGAGGAGTGGTGT+CGG	-	chr3.2:92940461-92940480	None:intergenic	65.0%
	TCTCCCCGGTGCAGAGTGCA+CGG	-	chr3.2:92940492-92940511	None:intergenic	65.0%
!	ACCGCCGGTAATGGTACCGG+TGG	+	chr3.2:92940604-92940623	MS.gene68752:CDS	65.0%
!!	TCCGACCGGTTCGTCTCCGA+CGG	-	chr3.2:92940416-92940435	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	92940364	92940930	92940364	ID=MS.gene68752
chr3.2	mRNA	92940364	92940930	92940364	ID=MS.gene68752.t1;Parent=MS.gene68752
chr3.2	exon	92940364	92940930	92940364	ID=MS.gene68752.t1.exon1;Parent=MS.gene68752.t1
chr3.2	CDS	92940364	92940930	92940364	ID=cds.MS.gene68752.t1;Parent=MS.gene68752.t1

Gene Sequence

>MS.gene68752

ATGTCTAACCCCATCCCCAACCCCAATCCCAAAGTCTTCTTCGACATGACCGTCGGAGACGAACCGGTCGGACGTATCGTCATGGAACTTTACGCCGACACCACTCCTCTCACCGCCGATAACTTCCGTGCACTCTGCACCGGGGAGAAAGGACTCGGTAGCAGTGGCAAGCCTCTCCATTACAAAGGCTCTATCTTCCACCGCGTCATACCTGATTTCATGTGTCAAGGAGGTGACTTCACCGCCGGTAATGGTACCGGTGGAGAGTCCATCTACGGGTCCAAATTCGCCGACGAGAATTTCATCAAGACCCACACAGGTCCAGGTGTTCTTTCAATGGCGAATGCGGGACCCGGTACGAATGGATCACAGTTCTTCATATGCACGGCGAAGACGGAGTGGCTTGATGGGAAACATGTGGTTTTTGGTGAGGTGGTTGAAGGAATGGAGGTGGTGAAAGAGATTGAGAAAGTTGGGTCCGGTTCGGGGAAAACATCAAAGCCGGTGGTTATTGCTGACTGCGGCCAACTCTCTGATGATAATGATCTTAACCAACAACATATATAG

Protein sequence

>MS.gene68752.t1

MSNPIPNPNPKVFFDMTVGDEPVGRIVMELYADTTPLTADNFRALCTGEKGLGSSGKPLHYKGSIFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFADENFIKTHTGPGVLSMANAGPGTNGSQFFICTAKTEWLDGKHVVFGEVVEGMEVVKEIEKVGSGSGKTSKPVVIADCGQLSDDNDLNQQHI