Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34874.t1 | XP_013446521.1 | 95 | 660 | 32 | 1 | 1 | 659 | 1 | 660 | 0.00E+00 | 1093.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34874.t1 | A0A072TUM3 | 95.0 | 660 | 32 | 1 | 1 | 659 | 1 | 660 | 0.0e+00 | 1093.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene34874 | 0.80609 | 9.74E-50 | -1.69E-46 |
| MS.gene049150 | MS.gene34874 | 0.854751 | 9.99E-62 | -1.69E-46 |
| MS.gene049153 | MS.gene34874 | 0.856925 | 2.31E-62 | -1.69E-46 |
| MS.gene04933 | MS.gene34874 | 0.803935 | 2.75E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene34874 | 0.801604 | 8.32E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene34874 | 0.800228 | 1.59E-48 | -1.69E-46 |
| MS.gene049426 | MS.gene34874 | 0.810524 | 1.10E-50 | -1.69E-46 |
| MS.gene049488 | MS.gene34874 | 0.835621 | 1.51E-56 | -1.69E-46 |
| MS.gene049910 | MS.gene34874 | 0.826181 | 3.12E-54 | -1.69E-46 |
| MS.gene049993 | MS.gene34874 | 0.866032 | 3.83E-65 | -1.69E-46 |
| MS.gene050168 | MS.gene34874 | 0.8231 | 1.66E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene34874 | 0.806718 | 7.18E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene34874 | -0.834275 | 3.29E-56 | -1.69E-46 |
| MS.gene050464 | MS.gene34874 | 0.824963 | 6.07E-54 | -1.69E-46 |
| MS.gene050640 | MS.gene34874 | 0.802199 | 6.28E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene34874 | 0.848998 | 4.29E-60 | -1.69E-46 |
| MS.gene050820 | MS.gene34874 | 0.806712 | 7.20E-50 | -1.69E-46 |
| MS.gene050971 | MS.gene34874 | 0.800217 | 1.60E-48 | -1.69E-46 |
| MS.gene051525 | MS.gene34874 | 0.859025 | 5.50E-63 | -1.69E-46 |
| MS.gene051568 | MS.gene34874 | 0.823643 | 1.24E-53 | -1.69E-46 |
| MS.gene051582 | MS.gene34874 | 0.827651 | 1.39E-54 | -1.69E-46 |
| MS.gene051588 | MS.gene34874 | 0.850122 | 2.08E-60 | -1.69E-46 |
| MS.gene051860 | MS.gene34874 | 0.850548 | 1.58E-60 | -1.69E-46 |
| MS.gene051983 | MS.gene34874 | 0.848585 | 5.58E-60 | -1.69E-46 |
| MS.gene052011 | MS.gene34874 | -0.880551 | 5.00E-70 | -1.69E-46 |
| MS.gene052077 | MS.gene34874 | 0.851173 | 1.05E-60 | -1.69E-46 |
| MS.gene052134 | MS.gene34874 | 0.801086 | 1.06E-48 | -1.69E-46 |
| MS.gene052135 | MS.gene34874 | 0.819905 | 9.08E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene34874 | 0.846015 | 2.83E-59 | -1.69E-46 |
| MS.gene052253 | MS.gene34874 | 0.856531 | 3.02E-62 | -1.69E-46 |
| MS.gene052255 | MS.gene34874 | 0.81384 | 2.09E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene34874 | 0.829337 | 5.45E-55 | -1.69E-46 |
| MS.gene052414 | MS.gene34874 | 0.822248 | 2.62E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene34874 | 0.814562 | 1.45E-51 | -1.69E-46 |
| MS.gene053169 | MS.gene34874 | 0.800878 | 1.17E-48 | -1.69E-46 |
| MS.gene05316 | MS.gene34874 | 0.824132 | 9.52E-54 | -1.69E-46 |
| MS.gene053330 | MS.gene34874 | 0.805806 | 1.12E-49 | -1.69E-46 |
| MS.gene053494 | MS.gene34874 | 0.832719 | 8.05E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene34874 | 0.839389 | 1.63E-57 | -1.69E-46 |
| MS.gene053873 | MS.gene34874 | 0.80362 | 3.20E-49 | -1.69E-46 |
| MS.gene053928 | MS.gene34874 | 0.804646 | 1.95E-49 | -1.69E-46 |
| MS.gene054010 | MS.gene34874 | 0.804734 | 1.87E-49 | -1.69E-46 |
| MS.gene054011 | MS.gene34874 | 0.806277 | 8.89E-50 | -1.69E-46 |
| MS.gene054012 | MS.gene34874 | 0.800273 | 1.56E-48 | -1.69E-46 |
| MS.gene054102 | MS.gene34874 | 0.856788 | 2.54E-62 | -1.69E-46 |
| MS.gene054108 | MS.gene34874 | 0.835892 | 1.29E-56 | -1.69E-46 |
| MS.gene054110 | MS.gene34874 | 0.802083 | 6.64E-49 | -1.69E-46 |
| MS.gene05413 | MS.gene34874 | 0.826955 | 2.04E-54 | -1.69E-46 |
| MS.gene054173 | MS.gene34874 | 0.80086 | 1.18E-48 | -1.69E-46 |
| MS.gene054183 | MS.gene34874 | 0.914236 | 2.43E-84 | -1.69E-46 |
| MS.gene054349 | MS.gene34874 | 0.873392 | 1.52E-67 | -1.69E-46 |
| MS.gene054556 | MS.gene34874 | 0.840172 | 1.02E-57 | -1.69E-46 |
| MS.gene054719 | MS.gene34874 | 0.86657 | 2.59E-65 | -1.69E-46 |
| MS.gene054918 | MS.gene34874 | 0.823253 | 1.53E-53 | -1.69E-46 |
| MS.gene054920 | MS.gene34874 | 0.836399 | 9.58E-57 | -1.69E-46 |
| MS.gene054930 | MS.gene34874 | 0.825086 | 5.68E-54 | -1.69E-46 |
| MS.gene054983 | MS.gene34874 | 0.805643 | 1.21E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene34874 | 0.845993 | 2.87E-59 | -1.69E-46 |
| MS.gene055217 | MS.gene34874 | 0.809998 | 1.43E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene34874 | 0.821726 | 3.46E-53 | -1.69E-46 |
| MS.gene055367 | MS.gene34874 | 0.805722 | 1.16E-49 | -1.69E-46 |
| MS.gene055369 | MS.gene34874 | 0.864823 | 9.22E-65 | -1.69E-46 |
| MS.gene055539 | MS.gene34874 | 0.811591 | 6.48E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene34874 | 0.872309 | 3.51E-67 | -1.69E-46 |
| MS.gene055601 | MS.gene34874 | -0.808893 | 2.48E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene34874 | 0.841623 | 4.25E-58 | -1.69E-46 |
| MS.gene055701 | MS.gene34874 | 0.819948 | 8.88E-53 | -1.69E-46 |
| MS.gene05594 | MS.gene34874 | 0.84 | 1.13E-57 | -1.69E-46 |
| MS.gene056337 | MS.gene34874 | 0.817591 | 3.05E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene34874 | 0.836141 | 1.11E-56 | -1.69E-46 |
| MS.gene056514 | MS.gene34874 | 0.867398 | 1.41E-65 | -1.69E-46 |
| MS.gene056659 | MS.gene34874 | 0.852451 | 4.58E-61 | -1.69E-46 |
| MS.gene056723 | MS.gene34874 | 0.879131 | 1.60E-69 | -1.69E-46 |
| MS.gene056899 | MS.gene34874 | -0.847199 | 1.35E-59 | -1.69E-46 |
| MS.gene056979 | MS.gene34874 | 0.834393 | 3.08E-56 | -1.69E-46 |
| MS.gene05702 | MS.gene34874 | 0.838117 | 3.48E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene34874 | 0.800542 | 1.37E-48 | -1.69E-46 |
| MS.gene057124 | MS.gene34874 | 0.802817 | 4.69E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene34874 | 0.852576 | 4.22E-61 | -1.69E-46 |
| MS.gene057448 | MS.gene34874 | 0.824201 | 9.17E-54 | -1.69E-46 |
| MS.gene057449 | MS.gene34874 | 0.803621 | 3.19E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene34874 | 0.812704 | 3.71E-51 | -1.69E-46 |
| MS.gene057469 | MS.gene34874 | 0.840543 | 8.16E-58 | -1.69E-46 |
| MS.gene057476 | MS.gene34874 | 0.862656 | 4.34E-64 | -1.69E-46 |
| MS.gene057749 | MS.gene34874 | 0.882185 | 1.29E-70 | -1.69E-46 |
| MS.gene057750 | MS.gene34874 | 0.804789 | 1.83E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene34874 | 0.873765 | 1.14E-67 | -1.69E-46 |
| MS.gene057824 | MS.gene34874 | 0.830584 | 2.70E-55 | -1.69E-46 |
| MS.gene057825 | MS.gene34874 | 0.877441 | 6.27E-69 | -1.69E-46 |
| MS.gene057826 | MS.gene34874 | 0.847014 | 1.51E-59 | -1.69E-46 |
| MS.gene057888 | MS.gene34874 | 0.821646 | 3.62E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene34874 | 0.83891 | 2.17E-57 | -1.69E-46 |
| MS.gene058007 | MS.gene34874 | 0.813883 | 2.04E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene34874 | 0.801032 | 1.09E-48 | -1.69E-46 |
| MS.gene058142 | MS.gene34874 | 0.860602 | 1.84E-63 | -1.69E-46 |
| MS.gene058220 | MS.gene34874 | 0.828297 | 9.72E-55 | -1.69E-46 |
| MS.gene058700 | MS.gene34874 | 0.820347 | 7.20E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene34874 | 0.832764 | 7.85E-56 | -1.69E-46 |
| MS.gene05872 | MS.gene34874 | 0.80578 | 1.13E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene34874 | 0.863133 | 3.09E-64 | -1.69E-46 |
| MS.gene058928 | MS.gene34874 | 0.833269 | 5.88E-56 | -1.69E-46 |
| MS.gene058949 | MS.gene34874 | 0.858042 | 1.08E-62 | -1.69E-46 |
| MS.gene058995 | MS.gene34874 | 0.802766 | 4.80E-49 | -1.69E-46 |
| MS.gene059011 | MS.gene34874 | 0.856065 | 4.14E-62 | -1.69E-46 |
| MS.gene059043 | MS.gene34874 | -0.803924 | 2.76E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene34874 | 0.847956 | 8.33E-60 | -1.69E-46 |
| MS.gene059082 | MS.gene34874 | 0.823774 | 1.16E-53 | -1.69E-46 |
| MS.gene059141 | MS.gene34874 | 0.842137 | 3.11E-58 | -1.69E-46 |
| MS.gene059285 | MS.gene34874 | 0.853904 | 1.76E-61 | -1.69E-46 |
| MS.gene059294 | MS.gene34874 | 0.80695 | 6.41E-50 | -1.69E-46 |
| MS.gene059366 | MS.gene34874 | 0.811444 | 6.98E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene34874 | 0.911487 | 5.75E-83 | -1.69E-46 |
| MS.gene059462 | MS.gene34874 | 0.856149 | 3.91E-62 | -1.69E-46 |
| MS.gene059597 | MS.gene34874 | 0.812728 | 3.66E-51 | -1.69E-46 |
| MS.gene059609 | MS.gene34874 | 0.814534 | 1.47E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene34874 | 0.803273 | 3.77E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene34874 | 0.813091 | 3.05E-51 | -1.69E-46 |
| MS.gene059868 | MS.gene34874 | 0.827184 | 1.80E-54 | -1.69E-46 |
| MS.gene059876 | MS.gene34874 | 0.838341 | 3.05E-57 | -1.69E-46 |
| MS.gene059958 | MS.gene34874 | 0.843549 | 1.31E-58 | -1.69E-46 |
| MS.gene060038 | MS.gene34874 | 0.828671 | 7.90E-55 | -1.69E-46 |
| MS.gene060247 | MS.gene34874 | 0.865188 | 7.08E-65 | -1.69E-46 |
| MS.gene060403 | MS.gene34874 | 0.810361 | 1.20E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene34874 | 0.854368 | 1.29E-61 | -1.69E-46 |
| MS.gene061114 | MS.gene34874 | -0.868212 | 7.72E-66 | -1.69E-46 |
| MS.gene061154 | MS.gene34874 | 0.821831 | 3.27E-53 | -1.69E-46 |
| MS.gene061159 | MS.gene34874 | 0.875529 | 2.87E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34874.t1 | MTR_8g080080 | 94.697 | 660 | 34 | 1 | 1 | 659 | 1 | 660 | 0.0 | 1300 |
| MS.gene34874.t1 | MTR_3g085830 | 58.055 | 689 | 236 | 19 | 1 | 659 | 1 | 666 | 0.0 | 731 |
| MS.gene34874.t1 | MTR_6g022830 | 48.271 | 665 | 305 | 16 | 1 | 635 | 1 | 656 | 0.0 | 538 |
| MS.gene34874.t1 | MTR_6g023070 | 44.781 | 594 | 287 | 15 | 67 | 635 | 16 | 593 | 5.13e-139 | 419 |
| MS.gene34874.t1 | MTR_7g117620 | 28.819 | 288 | 169 | 7 | 99 | 382 | 40 | 295 | 4.20e-18 | 88.6 |
| MS.gene34874.t1 | MTR_2g096190 | 25.887 | 282 | 172 | 8 | 106 | 382 | 31 | 280 | 2.04e-15 | 80.1 |
| MS.gene34874.t1 | MTR_2g096190 | 30.769 | 195 | 119 | 3 | 102 | 296 | 66 | 244 | 6.84e-15 | 78.6 |
| MS.gene34874.t1 | MTR_2g096190 | 27.957 | 186 | 116 | 4 | 221 | 405 | 101 | 269 | 1.05e-12 | 71.6 |
| MS.gene34874.t1 | MTR_7g100390 | 27.686 | 242 | 140 | 5 | 106 | 345 | 53 | 261 | 4.03e-15 | 79.0 |
| MS.gene34874.t1 | MTR_4g062100 | 25.943 | 212 | 139 | 3 | 188 | 399 | 108 | 301 | 1.65e-14 | 77.0 |
| MS.gene34874.t1 | MTR_7g100430 | 30.808 | 198 | 119 | 6 | 189 | 386 | 162 | 341 | 1.98e-14 | 77.0 |
| MS.gene34874.t1 | MTR_7g100430 | 26.515 | 264 | 161 | 10 | 133 | 385 | 65 | 306 | 2.88e-12 | 70.1 |
| MS.gene34874.t1 | MTR_2g101310 | 27.717 | 184 | 109 | 4 | 220 | 382 | 139 | 319 | 1.64e-13 | 74.3 |
| MS.gene34874.t1 | MTR_2g101310 | 27.717 | 184 | 109 | 4 | 220 | 382 | 139 | 319 | 3.06e-13 | 73.2 |
| MS.gene34874.t1 | MTR_1g115575 | 28.636 | 220 | 129 | 5 | 102 | 320 | 131 | 323 | 1.44e-12 | 71.2 |
| MS.gene34874.t1 | MTR_1g115575 | 26.667 | 285 | 177 | 8 | 105 | 389 | 100 | 352 | 6.03e-12 | 69.3 |
| MS.gene34874.t1 | MTR_2g101320 | 27.717 | 184 | 109 | 5 | 220 | 382 | 139 | 319 | 6.45e-12 | 69.3 |
| MS.gene34874.t1 | MTR_5g026800 | 32.022 | 178 | 92 | 7 | 175 | 352 | 10 | 158 | 7.59e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34874.t1 | AT3G01750 | 49.483 | 580 | 264 | 8 | 1 | 559 | 1 | 572 | 0.0 | 537 |
| MS.gene34874.t1 | AT3G01750 | 49.483 | 580 | 264 | 8 | 1 | 559 | 1 | 572 | 0.0 | 537 |
| MS.gene34874.t1 | AT3G04140 | 43.769 | 674 | 320 | 18 | 1 | 650 | 1 | 639 | 8.32e-161 | 477 |
| MS.gene34874.t1 | AT2G31820 | 28.125 | 288 | 171 | 7 | 99 | 382 | 148 | 403 | 5.84e-18 | 88.6 |
| MS.gene34874.t1 | AT1G07710 | 25.887 | 282 | 174 | 8 | 105 | 382 | 30 | 280 | 3.67e-15 | 79.3 |
| MS.gene34874.t1 | AT1G07710 | 30.151 | 199 | 120 | 5 | 98 | 296 | 99 | 278 | 2.07e-13 | 73.9 |
| MS.gene34874.t1 | AT1G07710 | 26.147 | 218 | 144 | 4 | 188 | 405 | 69 | 269 | 3.37e-13 | 73.2 |
| MS.gene34874.t1 | AT1G07710 | 31.980 | 197 | 114 | 5 | 102 | 296 | 66 | 244 | 4.85e-13 | 72.4 |
| MS.gene34874.t1 | AT1G07710 | 25.887 | 282 | 174 | 8 | 105 | 382 | 30 | 280 | 3.67e-15 | 79.3 |
| MS.gene34874.t1 | AT1G07710 | 30.151 | 199 | 120 | 5 | 98 | 296 | 99 | 278 | 2.07e-13 | 73.9 |
| MS.gene34874.t1 | AT1G07710 | 26.147 | 218 | 144 | 4 | 188 | 405 | 69 | 269 | 3.37e-13 | 73.2 |
| MS.gene34874.t1 | AT1G07710 | 31.980 | 197 | 114 | 5 | 102 | 296 | 66 | 244 | 4.85e-13 | 72.4 |
| MS.gene34874.t1 | AT5G02620 | 28.061 | 196 | 121 | 5 | 188 | 382 | 94 | 270 | 6.72e-13 | 72.0 |
| MS.gene34874.t1 | AT5G02620 | 28.061 | 196 | 121 | 5 | 188 | 382 | 94 | 270 | 6.72e-13 | 72.0 |
| MS.gene34874.t1 | AT5G02620 | 28.061 | 196 | 121 | 5 | 188 | 382 | 94 | 270 | 6.72e-13 | 72.0 |
| MS.gene34874.t1 | AT5G02620 | 31.250 | 160 | 91 | 4 | 188 | 346 | 94 | 235 | 6.17e-12 | 68.9 |
| MS.gene34874.t1 | AT5G02620 | 31.250 | 160 | 91 | 4 | 188 | 346 | 94 | 235 | 6.17e-12 | 68.9 |
| MS.gene34874.t1 | AT5G54610 | 25.714 | 210 | 144 | 5 | 184 | 391 | 36 | 235 | 9.06e-12 | 68.2 |
| MS.gene34874.t1 | AT3G09550 | 28.796 | 191 | 118 | 5 | 188 | 378 | 181 | 353 | 1.64e-11 | 67.8 |
| MS.gene34874.t1 | AT3G09550 | 28.796 | 191 | 118 | 5 | 188 | 378 | 181 | 353 | 1.64e-11 | 67.8 |
| MS.gene34874.t1 | AT3G09550 | 28.796 | 191 | 118 | 5 | 188 | 378 | 188 | 360 | 1.67e-11 | 67.8 |
| MS.gene34874.t1 | AT1G03670 | 35.606 | 132 | 75 | 4 | 183 | 306 | 35 | 164 | 2.17e-11 | 67.4 |
| MS.gene34874.t1 | AT5G60070 | 27.928 | 222 | 131 | 6 | 190 | 404 | 113 | 312 | 2.36e-11 | 67.4 |
| MS.gene34874.t1 | AT5G60070 | 29.231 | 195 | 123 | 3 | 102 | 296 | 73 | 252 | 3.67e-11 | 66.6 |
| MS.gene34874.t1 | AT2G01680 | 27.778 | 198 | 125 | 5 | 197 | 393 | 70 | 250 | 3.93e-11 | 66.6 |
Find 101 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGACTAGTGGTGTTAAT+TGG | 0.207448 | 4.1:-15503387 | MS.gene34874:CDS |
| AAGAATTTCCAATCTCATTA+AGG | 0.276743 | 4.1:-15503243 | MS.gene34874:CDS |
| TGCTGCTTCTGCTGGTGATT+TGG | 0.292656 | 4.1:-15505117 | MS.gene34874:CDS |
| ATCATCGTCTTCAAATTCTA+AGG | 0.293118 | 4.1:+15503306 | None:intergenic |
| GGACTGCCCTCTTGCTCTTC+CGG | 0.294862 | 4.1:-15503025 | MS.gene34874:CDS |
| TCTCTCATTCGTGGTGGATA+TGG | 0.311166 | 4.1:-15505158 | MS.gene34874:CDS |
| TATCTTTGCCTTAATGAGAT+TGG | 0.319231 | 4.1:+15503235 | None:intergenic |
| CCTAATGCAAGGTGTAATTA+AGG | 0.327932 | 4.1:-15503119 | MS.gene34874:CDS |
| TCAGTAGAGTTTACAATATC+AGG | 0.332328 | 4.1:+15504078 | None:intergenic |
| TGATATTCTAAATGAAGTTC+CGG | 0.337345 | 4.1:+15503528 | None:intergenic |
| ACAAAAGAACACTATCTATA+AGG | 0.350958 | 4.1:-15503186 | MS.gene34874:CDS |
| TTGAAAACTCGTCATGGTAT+TGG | 0.358691 | 4.1:-15503559 | MS.gene34874:CDS |
| CTCCTTATAGTTCAACTGTT+GGG | 0.368527 | 4.1:+15502982 | None:intergenic |
| CCTTAATTACACCTTGCATT+AGG | 0.369020 | 4.1:+15503119 | None:intergenic |
| AGATTGTGGTATTGTTGAAT+TGG | 0.372361 | 4.1:-15504949 | MS.gene34874:CDS |
| TTGTATACTGCTGCTTCTGC+TGG | 0.379152 | 4.1:-15505125 | MS.gene34874:CDS |
| TTAATAATTCTGTAAGTTCA+AGG | 0.385745 | 4.1:-15503279 | MS.gene34874:CDS |
| TTTCTTCATATGGCAGTGTA+TGG | 0.393239 | 4.1:-15503937 | MS.gene34874:CDS |
| CTGCTGCTAGAGGAGGGAAT+TGG | 0.395808 | 4.1:-15504869 | MS.gene34874:CDS |
| TGCTGCTAGAGGAGGGAATT+GGG | 0.409718 | 4.1:-15504868 | MS.gene34874:CDS |
| AATTCAGAAGATCTTGATCT+TGG | 0.413086 | 4.1:+15503661 | None:intergenic |
| TTCTTACTTTCCTCTACGTT+GGG | 0.414168 | 4.1:-15505432 | MS.gene34874:CDS |
| TGGAGCACAAGGGCAGGCTT+TGG | 0.420864 | 4.1:-15502918 | MS.gene34874:CDS |
| CAAGACTAGTGGTGTTAATT+GGG | 0.421578 | 4.1:-15503386 | MS.gene34874:CDS |
| GTTGAGAAGAGATTCTTTGT+TGG | 0.423804 | 4.1:-15505078 | MS.gene34874:CDS |
| TTTGCAGCTGCTAAATCAAT+AGG | 0.426019 | 4.1:+15505377 | None:intergenic |
| TTGGATGAAGGTGGTGGTGG+TGG | 0.428570 | 4.1:-15504930 | MS.gene34874:CDS |
| GTGTATGGTTTCATAAATCC+TGG | 0.431340 | 4.1:-15503922 | MS.gene34874:CDS |
| TCAAGAGGGAGATAATGAAT+AGG | 0.434364 | 4.1:-15504902 | MS.gene34874:CDS |
| ATCAATGTCATGAACAATGT+TGG | 0.435421 | 4.1:-15503820 | MS.gene34874:CDS |
| AAAAGTGTCTCCATTGTGAT+TGG | 0.439400 | 4.1:+15503957 | None:intergenic |
| TACCCAACAGTTGAACTATA+AGG | 0.443698 | 4.1:-15502984 | MS.gene34874:CDS |
| GATATTCTAAATGAAGTTCC+GGG | 0.452704 | 4.1:+15503529 | None:intergenic |
| CAAGAGGGAGATAATGAATA+GGG | 0.454391 | 4.1:-15504901 | MS.gene34874:CDS |
| GAATTGGATGAAGGTGGTGG+TGG | 0.455900 | 4.1:-15504933 | MS.gene34874:CDS |
| TGCTCTTCCGGACCAATAGA+TGG | 0.463195 | 4.1:-15503013 | MS.gene34874:CDS |
| CGAAAAGGTTGCGAACATAA+AGG | 0.466998 | 4.1:-15503848 | MS.gene34874:CDS |
| TGAGAAGATTTGTATCATGA+TGG | 0.469922 | 4.1:+15505324 | None:intergenic |
| GGTATTGTTGAATTGGATGA+AGG | 0.476941 | 4.1:-15504942 | MS.gene34874:CDS |
| TCAATGTCATGAACAATGTT+GGG | 0.477167 | 4.1:-15503819 | MS.gene34874:CDS |
| TGAGTTATTACTAACCGAAA+AGG | 0.479208 | 4.1:-15503863 | MS.gene34874:CDS |
| ACTGTCTTGCATTCAGCAGC+TGG | 0.480625 | 4.1:-15504774 | MS.gene34874:CDS |
| TTGTCTTATAGAGATGTTCA+AGG | 0.483573 | 4.1:-15504801 | MS.gene34874:CDS |
| CTTAACATTCGCGACGCAGA+TGG | 0.490419 | 4.1:-15503715 | MS.gene34874:CDS |
| TCTCCTTATAGTTCAACTGT+TGG | 0.494101 | 4.1:+15502981 | None:intergenic |
| ATTGATTTAGCAGCTGCAAA+TGG | 0.494631 | 4.1:-15505374 | MS.gene34874:CDS |
| CTTCTTACTTTCCTCTACGT+TGG | 0.504888 | 4.1:-15505433 | MS.gene34874:CDS |
| TTGCATTCAGCAGCTGGAAG+AGG | 0.512797 | 4.1:-15504768 | MS.gene34874:CDS |
| AGCTGGAAGAGGCCAGGTTG+AGG | 0.513559 | 4.1:-15504757 | MS.gene34874:intron |
| GAGTGTGAAGAAACAGCAAC+AGG | 0.514596 | 4.1:-15505188 | MS.gene34874:CDS |
| CACAAACATGTTGATACACT+GGG | 0.530524 | 4.1:-15503046 | MS.gene34874:CDS |
| CTCATTCGTGGTGGATATGG+TGG | 0.531172 | 4.1:-15505155 | MS.gene34874:CDS |
| TTCAGCAGCTGGAAGAGGCC+AGG | 0.531435 | 4.1:-15504763 | MS.gene34874:CDS |
| AAAACTCGTCATGGTATTGG+AGG | 0.532617 | 4.1:-15503556 | MS.gene34874:CDS |
| CATGGTATTGGAGGTAGTCC+CGG | 0.533373 | 4.1:-15503547 | MS.gene34874:CDS |
| GCACAAACATGTTGATACAC+TGG | 0.533788 | 4.1:-15503047 | MS.gene34874:CDS |
| ATTGGTTAACTTTGTTAGTG+AGG | 0.537838 | 4.1:+15503975 | None:intergenic |
| TTGGTTAACTTTGTTAGTGA+GGG | 0.539818 | 4.1:+15503976 | None:intergenic |
| CTTCCGGACCAATAGATGGT+GGG | 0.540457 | 4.1:-15503009 | MS.gene34874:CDS |
| TTCCGGACCAATAGATGGTG+GGG | 0.545341 | 4.1:-15503008 | MS.gene34874:CDS |
| GTGTTAATTGGGCCGCGAGA+CGG | 0.548204 | 4.1:-15503375 | MS.gene34874:CDS |
| ATCCATGCTGCTGCTAGAGG+AGG | 0.556428 | 4.1:-15504876 | MS.gene34874:CDS |
| CCTCTACGTTGGGAGAGCAC+AGG | 0.559069 | 4.1:-15505422 | MS.gene34874:CDS |
| TAGGTGTTGCATACCACCAT+TGG | 0.559115 | 4.1:+15505396 | None:intergenic |
| GGAACAAACTCTCTCATTCG+TGG | 0.569551 | 4.1:-15505167 | MS.gene34874:CDS |
| TTGTCTAGTCTGCAGAAACC+AGG | 0.572724 | 4.1:+15503904 | None:intergenic |
| CAACGTAGAGGAAAGTAAGA+AGG | 0.582105 | 4.1:+15505434 | None:intergenic |
| GCTATCCATGCTGCTGCTAG+AGG | 0.583266 | 4.1:-15504879 | MS.gene34874:CDS |
| TCCCTCCTCTAGCAGCAGCA+TGG | 0.591302 | 4.1:+15504874 | None:intergenic |
| GCTCTCTTAGGAAAAGATTG+TGG | 0.593730 | 4.1:-15504963 | MS.gene34874:CDS |
| TTGAAGATGTTGCAAAGTGT+AGG | 0.602447 | 4.1:-15505238 | MS.gene34874:CDS |
| TTACAGAGGTTACCTTCATG+TGG | 0.604215 | 4.1:-15504022 | MS.gene34874:CDS |
| TTACATGTGGCTTCTTACAG+AGG | 0.607361 | 4.1:-15504036 | MS.gene34874:CDS |
| TATTGGTCCGGAAGAGCAAG+AGG | 0.608650 | 4.1:+15503018 | None:intergenic |
| TCTTCCGGACCAATAGATGG+TGG | 0.609522 | 4.1:-15503010 | MS.gene34874:CDS |
| GTTGAATTGGATGAAGGTGG+TGG | 0.611508 | 4.1:-15504936 | MS.gene34874:CDS |
| TCCGGACCAATAGATGGTGG+GGG | 0.614815 | 4.1:-15503007 | MS.gene34874:CDS |
| TCCATGCTGCTGCTAGAGGA+GGG | 0.615437 | 4.1:-15504875 | MS.gene34874:CDS |
| ACTCATTTGAAAACTCGTCA+TGG | 0.623099 | 4.1:-15503565 | MS.gene34874:CDS |
| TTCACAGCAGGCCTAATGCA+AGG | 0.623668 | 4.1:-15503130 | MS.gene34874:CDS |
| TTCGTGGTGGATATGGTGGA+TGG | 0.624766 | 4.1:-15505151 | MS.gene34874:CDS |
| TGTGAGTACTTACCTCAACC+TGG | 0.625786 | 4.1:+15504745 | None:intergenic |
| TTAGAATCTCTACCACATGA+AGG | 0.626407 | 4.1:+15504010 | None:intergenic |
| ATTGTTGAATTGGATGAAGG+TGG | 0.627731 | 4.1:-15504939 | MS.gene34874:CDS |
| GGGAGAGCACAGGAGACCAA+TGG | 0.629721 | 4.1:-15505412 | MS.gene34874:CDS |
| AGCTAGGAGTAAGAATTCTG+AGG | 0.643118 | 4.1:-15505009 | MS.gene34874:CDS |
| GTGGTGGTGGAGATTTCAAG+AGG | 0.643581 | 4.1:-15504917 | MS.gene34874:CDS |
| ACTAGTCTTGCTGTTACATG+AGG | 0.645032 | 4.1:+15503399 | None:intergenic |
| TCATGTAACAGCAAGACTAG+TGG | 0.650511 | 4.1:-15503397 | MS.gene34874:CDS |
| TCGTCGACTAGAAACTGTGT+GGG | 0.654713 | 4.1:-15505276 | MS.gene34874:CDS |
| GGTTAATGAATCTTCTCAAG+TGG | 0.655449 | 4.1:-15503354 | MS.gene34874:CDS |
| CCTGTGCTCTCCCAACGTAG+AGG | 0.659563 | 4.1:+15505422 | None:intergenic |
| ACAAAGTTAACCAATCACAA+TGG | 0.661701 | 4.1:-15503967 | MS.gene34874:CDS |
| TGGTGGTGGAGATTTCAAGA+GGG | 0.666190 | 4.1:-15504916 | MS.gene34874:CDS |
| AGAGCACAGGAGACCAATGG+TGG | 0.668331 | 4.1:-15505409 | MS.gene34874:CDS |
| ACAAACTCTCTCATTCGTGG+TGG | 0.676010 | 4.1:-15505164 | MS.gene34874:CDS |
| TTCGTCGACTAGAAACTGTG+TGG | 0.676029 | 4.1:-15505277 | MS.gene34874:CDS |
| GTAAACTCTACTGATGCACA+AGG | 0.676230 | 4.1:-15504069 | MS.gene34874:CDS |
| AGGTAATGCAGCATTACATG+TGG | 0.677340 | 4.1:-15504049 | MS.gene34874:CDS |
| ATTGGTCCGGAAGAGCAAGA+GGG | 0.694634 | 4.1:+15503019 | None:intergenic |
| AAGATTCATTAACCGTCTCG+CGG | 0.701144 | 4.1:+15503363 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAGAGACAAAATTATA+TGG | + | chr4.1:15503850-15503869 | None:intergenic | 15.0% |
| !!! | TATAATTTTGTTAATTTCAG+TGG | - | chr4.1:15503988-15504007 | MS.gene34874:CDS | 15.0% |
| !! | AATGAAATAATTAATGATGC+AGG | - | chr4.1:15504166-15504185 | MS.gene34874:intron | 20.0% |
| !! | ACAAAATTATATGGTTTCTA+GGG | + | chr4.1:15503841-15503860 | None:intergenic | 20.0% |
| !! | ACTGATAATAGTTTGAAAAT+TGG | - | chr4.1:15503705-15503724 | MS.gene34874:CDS | 20.0% |
| !! | TTAATAATTCTGTAAGTTCA+AGG | - | chr4.1:15505014-15505033 | MS.gene34874:CDS | 20.0% |
| !!! | ATAGGGAATTTTCATTTTTA+GGG | - | chr4.1:15503958-15503977 | MS.gene34874:CDS | 20.0% |
| !!! | ATGAACAAGTATTTTTCTTT+TGG | - | chr4.1:15505355-15505374 | MS.gene34874:CDS | 20.0% |
| !!! | CTTTTTTTCAAATAATCAAG+AGG | + | chr4.1:15504611-15504630 | None:intergenic | 20.0% |
| ! | AAGAATTTCCAATCTCATTA+AGG | - | chr4.1:15505050-15505069 | MS.gene34874:CDS | 25.0% |
| ! | AAGTTCAAGGAAAAATGATT+TGG | - | chr4.1:15505027-15505046 | MS.gene34874:CDS | 25.0% |
| ! | ACAAAAGAACACTATCTATA+AGG | - | chr4.1:15505107-15505126 | MS.gene34874:CDS | 25.0% |
| ! | ACAGTTAATACTACATAATC+TGG | - | chr4.1:15504083-15504102 | MS.gene34874:CDS | 25.0% |
| ! | ACCAACTTTATAATGTGATA+GGG | - | chr4.1:15503941-15503960 | MS.gene34874:CDS | 25.0% |
| ! | CAGTTAATACTACATAATCT+GGG | - | chr4.1:15504084-15504103 | MS.gene34874:CDS | 25.0% |
| ! | GACAAAATTATATGGTTTCT+AGG | + | chr4.1:15503842-15503861 | None:intergenic | 25.0% |
| ! | TGATATTCTAAATGAAGTTC+CGG | + | chr4.1:15504768-15504787 | None:intergenic | 25.0% |
| !! | GATCGAAAATTTTCAATTTC+AGG | + | chr4.1:15503895-15503914 | None:intergenic | 25.0% |
| !!! | GATAGGGAATTTTCATTTTT+AGG | - | chr4.1:15503957-15503976 | MS.gene34874:CDS | 25.0% |
| !!! | GTGAAATATTTTTTTGCAGA+TGG | + | chr4.1:15505148-15505167 | None:intergenic | 25.0% |
| AAGGTAAAGACACAAAAAGA+AGG | - | chr4.1:15505193-15505212 | MS.gene34874:CDS | 30.0% | |
| AATTCAGAAGATCTTGATCT+TGG | + | chr4.1:15504635-15504654 | None:intergenic | 30.0% | |
| ACAAAGTTAACCAATCACAA+TGG | - | chr4.1:15504326-15504345 | MS.gene34874:intron | 30.0% | |
| ACTCAGATTAAAAACGTATC+CGG | + | chr4.1:15503788-15503807 | None:intergenic | 30.0% | |
| AGATTGTGGTATTGTTGAAT+TGG | - | chr4.1:15503344-15503363 | MS.gene34874:CDS | 30.0% | |
| AGGTAAAGACACAAAAAGAA+GGG | - | chr4.1:15505194-15505213 | MS.gene34874:CDS | 30.0% | |
| ATCAATGTCATGAACAATGT+TGG | - | chr4.1:15504473-15504492 | MS.gene34874:intron | 30.0% | |
| ATCATCGTCTTCAAATTCTA+AGG | + | chr4.1:15504990-15505009 | None:intergenic | 30.0% | |
| ATTGGTTAACTTTGTTAGTG+AGG | + | chr4.1:15504321-15504340 | None:intergenic | 30.0% | |
| CTACATAATCTGGGAATAAA+AGG | - | chr4.1:15504093-15504112 | MS.gene34874:CDS | 30.0% | |
| GAAATAATTAATGATGCAGG+TGG | - | chr4.1:15504169-15504188 | MS.gene34874:intron | 30.0% | |
| GACCAACTTTATAATGTGAT+AGG | - | chr4.1:15503940-15503959 | MS.gene34874:CDS | 30.0% | |
| GATATTCTAAATGAAGTTCC+GGG | + | chr4.1:15504767-15504786 | None:intergenic | 30.0% | |
| GCAAAAAAATATTTCACAGC+AGG | - | chr4.1:15505151-15505170 | MS.gene34874:CDS | 30.0% | |
| TATCTTTGCCTTAATGAGAT+TGG | + | chr4.1:15505061-15505080 | None:intergenic | 30.0% | |
| TCAATGTCATGAACAATGTT+GGG | - | chr4.1:15504474-15504493 | MS.gene34874:intron | 30.0% | |
| TCAGTAGAGTTTACAATATC+AGG | + | chr4.1:15504218-15504237 | None:intergenic | 30.0% | |
| TCCCTATCACATTATAAAGT+TGG | + | chr4.1:15503945-15503964 | None:intergenic | 30.0% | |
| TGAGAAGATTTGTATCATGA+TGG | + | chr4.1:15502972-15502991 | None:intergenic | 30.0% | |
| TGAGTTATTACTAACCGAAA+AGG | - | chr4.1:15504430-15504449 | MS.gene34874:intron | 30.0% | |
| TTGGTTAACTTTGTTAGTGA+GGG | + | chr4.1:15504320-15504339 | None:intergenic | 30.0% | |
| TTGTCTTATAGAGATGTTCA+AGG | - | chr4.1:15503492-15503511 | MS.gene34874:CDS | 30.0% | |
| ! | ATTCTTGATTTTGCTCTCTT+AGG | - | chr4.1:15503318-15503337 | MS.gene34874:CDS | 30.0% |
| !! | ATTTTAGTCCCTCAATACTT+GGG | + | chr4.1:15504027-15504046 | None:intergenic | 30.0% |
| !! | GTCTCTAAAATTGTAGAAGT+AGG | - | chr4.1:15503859-15503878 | MS.gene34874:CDS | 30.0% |
| !!! | AGAGATTCTTTGTTGGTTTT+TGG | - | chr4.1:15503222-15503241 | MS.gene34874:CDS | 30.0% |
| !!! | ATTTTTCTTTTGGAGCACAA+GGG | - | chr4.1:15505365-15505384 | MS.gene34874:CDS | 30.0% |
| !!! | GATAGTGTTCTTTTGTTGTT+TGG | + | chr4.1:15505103-15505122 | None:intergenic | 30.0% |
| !!! | TATTTTTCTTTTGGAGCACA+AGG | - | chr4.1:15505364-15505383 | MS.gene34874:CDS | 30.0% |
| !!! | TATTTTTTTGCAGATGGAGT+TGG | + | chr4.1:15505142-15505161 | None:intergenic | 30.0% |
| AATACTTGGGTAGAGCAATT+CGG | + | chr4.1:15504014-15504033 | None:intergenic | 35.0% | |
| ACTCATTTGAAAACTCGTCA+TGG | - | chr4.1:15504728-15504747 | MS.gene34874:intron | 35.0% | |
| ATTGTTGAATTGGATGAAGG+TGG | - | chr4.1:15503354-15503373 | MS.gene34874:CDS | 35.0% | |
| CAAGAGGGAGATAATGAATA+GGG | - | chr4.1:15503392-15503411 | MS.gene34874:CDS | 35.0% | |
| CACAAACATGTTGATACACT+GGG | - | chr4.1:15505247-15505266 | MS.gene34874:CDS | 35.0% | |
| CATAATCTGGGAATAAAAGG+AGG | - | chr4.1:15504096-15504115 | MS.gene34874:CDS | 35.0% | |
| CCTAATGCAAGGTGTAATTA+AGG | - | chr4.1:15505174-15505193 | MS.gene34874:CDS | 35.0% | |
| CCTTAATTACACCTTGCATT+AGG | + | chr4.1:15505177-15505196 | None:intergenic | 35.0% | |
| CTATGTCACATTCTAAACAC+CGG | - | chr4.1:15503766-15503785 | MS.gene34874:CDS | 35.0% | |
| CTCCTTATAGTTCAACTGTT+GGG | + | chr4.1:15505314-15505333 | None:intergenic | 35.0% | |
| GGTATTGTTGAATTGGATGA+AGG | - | chr4.1:15503351-15503370 | MS.gene34874:CDS | 35.0% | |
| GGTTAATGAATCTTCTCAAG+TGG | - | chr4.1:15504939-15504958 | MS.gene34874:CDS | 35.0% | |
| GTGTATGGTTTCATAAATCC+TGG | - | chr4.1:15504371-15504390 | MS.gene34874:intron | 35.0% | |
| GTTGAGAAGAGATTCTTTGT+TGG | - | chr4.1:15503215-15503234 | MS.gene34874:CDS | 35.0% | |
| TACCCAACAGTTGAACTATA+AGG | - | chr4.1:15505309-15505328 | MS.gene34874:CDS | 35.0% | |
| TCAAGAGGGAGATAATGAAT+AGG | - | chr4.1:15503391-15503410 | MS.gene34874:CDS | 35.0% | |
| TCTCCTTATAGTTCAACTGT+TGG | + | chr4.1:15505315-15505334 | None:intergenic | 35.0% | |
| TTAGAATCTCTACCACATGA+AGG | + | chr4.1:15504286-15504305 | None:intergenic | 35.0% | |
| TTCTTACTTTCCTCTACGTT+GGG | - | chr4.1:15502861-15502880 | MS.gene34874:CDS | 35.0% | |
| TTGAAAACTCGTCATGGTAT+TGG | - | chr4.1:15504734-15504753 | MS.gene34874:intron | 35.0% | |
| TTGAAGATGTTGCAAAGTGT+AGG | - | chr4.1:15503055-15503074 | MS.gene34874:CDS | 35.0% | |
| TTTCTTCATATGGCAGTGTA+TGG | - | chr4.1:15504356-15504375 | MS.gene34874:intron | 35.0% | |
| TTTGCAGCTGCTAAATCAAT+AGG | + | chr4.1:15502919-15502938 | None:intergenic | 35.0% | |
| ! | ATATGTTTTATGCTGCAGCT+AGG | - | chr4.1:15503268-15503287 | MS.gene34874:CDS | 35.0% |
| ! | ATTGATTTAGCAGCTGCAAA+TGG | - | chr4.1:15502919-15502938 | MS.gene34874:CDS | 35.0% |
| ! | CAAGACTAGTGGTGTTAATT+GGG | - | chr4.1:15504907-15504926 | MS.gene34874:CDS | 35.0% |
| ! | CTTTATGTTCGCAACCTTTT+CGG | + | chr4.1:15504447-15504466 | None:intergenic | 35.0% |
| ! | TGGAGACACTTTTCTTCATA+TGG | - | chr4.1:15504346-15504365 | MS.gene34874:intron | 35.0% |
| !! | AAAAGTGTCTCCATTGTGAT+TGG | + | chr4.1:15504339-15504358 | None:intergenic | 35.0% |
| !! | CATTTTAGTCCCTCAATACT+TGG | + | chr4.1:15504028-15504047 | None:intergenic | 35.0% |
| !!! | TCTTTGTTGGTTTTTGGTGA+AGG | - | chr4.1:15503228-15503247 | MS.gene34874:CDS | 35.0% |
| AAGATTCATTAACCGTCTCG+CGG | + | chr4.1:15504933-15504952 | None:intergenic | 40.0% | |
| AGCTAGGAGTAAGAATTCTG+AGG | - | chr4.1:15503284-15503303 | MS.gene34874:CDS | 40.0% | |
| AGGTAATGCAGCATTACATG+TGG | - | chr4.1:15504244-15504263 | MS.gene34874:intron | 40.0% | |
| CAACGTAGAGGAAAGTAAGA+AGG | + | chr4.1:15502862-15502881 | None:intergenic | 40.0% | |
| CGAAAAGGTTGCGAACATAA+AGG | - | chr4.1:15504445-15504464 | MS.gene34874:intron | 40.0% | |
| CTTCTTACTTTCCTCTACGT+TGG | - | chr4.1:15502860-15502879 | MS.gene34874:CDS | 40.0% | |
| GCACAAACATGTTGATACAC+TGG | - | chr4.1:15505246-15505265 | MS.gene34874:CDS | 40.0% | |
| GCTCTCTTAGGAAAAGATTG+TGG | - | chr4.1:15503330-15503349 | MS.gene34874:CDS | 40.0% | |
| GTAAACTCTACTGATGCACA+AGG | - | chr4.1:15504224-15504243 | MS.gene34874:intron | 40.0% | |
| TCATGTAACAGCAAGACTAG+TGG | - | chr4.1:15504896-15504915 | MS.gene34874:CDS | 40.0% | |
| TTACAGAGGTTACCTTCATG+TGG | - | chr4.1:15504271-15504290 | MS.gene34874:intron | 40.0% | |
| TTACATGTGGCTTCTTACAG+AGG | - | chr4.1:15504257-15504276 | MS.gene34874:intron | 40.0% | |
| ! | AAAACTCGTCATGGTATTGG+AGG | - | chr4.1:15504737-15504756 | MS.gene34874:intron | 40.0% |
| ! | ATTGCTCTACCCAAGTATTG+AGG | - | chr4.1:15504015-15504034 | MS.gene34874:CDS | 40.0% |
| ! | CTTGCTATGAAGTTCTGACA+TGG | - | chr4.1:15503666-15503685 | MS.gene34874:CDS | 40.0% |
| ! | GCAAGACTAGTGGTGTTAAT+TGG | - | chr4.1:15504906-15504925 | MS.gene34874:CDS | 40.0% |
| ! | TTTCTAGGGATCATACAAGC+AGG | + | chr4.1:15503827-15503846 | None:intergenic | 40.0% |
| !! | ACTAGTCTTGCTGTTACATG+AGG | + | chr4.1:15504897-15504916 | None:intergenic | 40.0% |
| !! | TTGCTCTACCCAAGTATTGA+GGG | - | chr4.1:15504016-15504035 | MS.gene34874:CDS | 40.0% |
| !!! | GTTTTTGGTGAAGGAGAGTA+TGG | - | chr4.1:15503237-15503256 | MS.gene34874:CDS | 40.0% |
| ACAAACTCTCTCATTCGTGG+TGG | - | chr4.1:15503129-15503148 | MS.gene34874:CDS | 45.0% | |
| GAGTGTGAAGAAACAGCAAC+AGG | - | chr4.1:15503105-15503124 | MS.gene34874:CDS | 45.0% | |
| GGAACAAACTCTCTCATTCG+TGG | - | chr4.1:15503126-15503145 | MS.gene34874:CDS | 45.0% | |
| GGTTGAGGTAAGTACTCACA+TGG | - | chr4.1:15503551-15503570 | MS.gene34874:CDS | 45.0% | |
| GTCAGAACTTCATAGCAAGC+AGG | + | chr4.1:15503665-15503684 | None:intergenic | 45.0% | |
| GTTGAATTGGATGAAGGTGG+TGG | - | chr4.1:15503357-15503376 | MS.gene34874:CDS | 45.0% | |
| TGTGAGTACTTACCTCAACC+TGG | + | chr4.1:15503551-15503570 | None:intergenic | 45.0% | |
| TTGTCTAGTCTGCAGAAACC+AGG | + | chr4.1:15504392-15504411 | None:intergenic | 45.0% | |
| ! | TAGGTGTTGCATACCACCAT+TGG | + | chr4.1:15502900-15502919 | None:intergenic | 45.0% |
| ! | TCGTCGACTAGAAACTGTGT+GGG | - | chr4.1:15503017-15503036 | MS.gene34874:CDS | 45.0% |
| ! | TTCGTCGACTAGAAACTGTG+TGG | - | chr4.1:15503016-15503035 | MS.gene34874:CDS | 45.0% |
| ! | TTGTATACTGCTGCTTCTGC+TGG | - | chr4.1:15503168-15503187 | MS.gene34874:CDS | 45.0% |
| !! | TCTCTCATTCGTGGTGGATA+TGG | - | chr4.1:15503135-15503154 | MS.gene34874:CDS | 45.0% |
| !! | TGGTGGTGGAGATTTCAAGA+GGG | - | chr4.1:15503377-15503396 | MS.gene34874:CDS | 45.0% |
| ACTGTCTTGCATTCAGCAGC+TGG | - | chr4.1:15503519-15503538 | MS.gene34874:CDS | 50.0% | |
| ATTGGTCCGGAAGAGCAAGA+GGG | + | chr4.1:15505277-15505296 | None:intergenic | 50.0% | |
| CTTAACATTCGCGACGCAGA+TGG | - | chr4.1:15504578-15504597 | MS.gene34874:intron | 50.0% | |
| CTTCCGGACCAATAGATGGT+GGG | - | chr4.1:15505284-15505303 | MS.gene34874:CDS | 50.0% | |
| TATTGGTCCGGAAGAGCAAG+AGG | + | chr4.1:15505278-15505297 | None:intergenic | 50.0% | |
| TCTTCCGGACCAATAGATGG+TGG | - | chr4.1:15505283-15505302 | MS.gene34874:CDS | 50.0% | |
| TGCTCTTCCGGACCAATAGA+TGG | - | chr4.1:15505280-15505299 | MS.gene34874:CDS | 50.0% | |
| TGCTGCTAGAGGAGGGAATT+GGG | - | chr4.1:15503425-15503444 | MS.gene34874:CDS | 50.0% | |
| TTCACAGCAGGCCTAATGCA+AGG | - | chr4.1:15505163-15505182 | MS.gene34874:CDS | 50.0% | |
| TTCCGGACCAATAGATGGTG+GGG | - | chr4.1:15505285-15505304 | MS.gene34874:CDS | 50.0% | |
| TTGCATTCAGCAGCTGGAAG+AGG | - | chr4.1:15503525-15503544 | MS.gene34874:CDS | 50.0% | |
| ! | CATGGTATTGGAGGTAGTCC+CGG | - | chr4.1:15504746-15504765 | MS.gene34874:intron | 50.0% |
| ! | GAATTGGATGAAGGTGGTGG+TGG | - | chr4.1:15503360-15503379 | MS.gene34874:CDS | 50.0% |
| ! | TGCTGCTTCTGCTGGTGATT+TGG | - | chr4.1:15503176-15503195 | MS.gene34874:CDS | 50.0% |
| !! | CTCATTCGTGGTGGATATGG+TGG | - | chr4.1:15503138-15503157 | MS.gene34874:CDS | 50.0% |
| !! | GTGGTGGTGGAGATTTCAAG+AGG | - | chr4.1:15503376-15503395 | MS.gene34874:CDS | 50.0% |
| !! | TTCGTGGTGGATATGGTGGA+TGG | - | chr4.1:15503142-15503161 | MS.gene34874:CDS | 50.0% |
| !!! | TTCTTTTGGAGCACAAGGGC+AGG | - | chr4.1:15505369-15505388 | MS.gene34874:CDS | 50.0% |
| ACCCCCACCATCTATTGGTC+CGG | + | chr4.1:15505290-15505309 | None:intergenic | 55.0% | |
| AGAGCACAGGAGACCAATGG+TGG | - | chr4.1:15502884-15502903 | MS.gene34874:CDS | 55.0% | |
| ATCCATGCTGCTGCTAGAGG+AGG | - | chr4.1:15503417-15503436 | MS.gene34874:CDS | 55.0% | |
| CTGCTGCTAGAGGAGGGAAT+TGG | - | chr4.1:15503424-15503443 | MS.gene34874:CDS | 55.0% | |
| GCTATCCATGCTGCTGCTAG+AGG | - | chr4.1:15503414-15503433 | MS.gene34874:CDS | 55.0% | |
| GTGTTAATTGGGCCGCGAGA+CGG | - | chr4.1:15504918-15504937 | MS.gene34874:CDS | 55.0% | |
| TCCATGCTGCTGCTAGAGGA+GGG | - | chr4.1:15503418-15503437 | MS.gene34874:CDS | 55.0% | |
| TGGGTACCCCCACCATCTAT+TGG | + | chr4.1:15505295-15505314 | None:intergenic | 55.0% | |
| ! | TCCGGACCAATAGATGGTGG+GGG | - | chr4.1:15505286-15505305 | MS.gene34874:CDS | 55.0% |
| !! | TTGGATGAAGGTGGTGGTGG+TGG | - | chr4.1:15503363-15503382 | MS.gene34874:CDS | 55.0% |
| AGCTGGAAGAGGCCAGGTTG+AGG | - | chr4.1:15503536-15503555 | MS.gene34874:CDS | 60.0% | |
| CCTGTGCTCTCCCAACGTAG+AGG | + | chr4.1:15502874-15502893 | None:intergenic | 60.0% | |
| GGACTGCCCTCTTGCTCTTC+CGG | - | chr4.1:15505268-15505287 | MS.gene34874:CDS | 60.0% | |
| TCCCTCCTCTAGCAGCAGCA+TGG | + | chr4.1:15503422-15503441 | None:intergenic | 60.0% | |
| TGGAGCACAAGGGCAGGCTT+TGG | - | chr4.1:15505375-15505394 | MS.gene34874:CDS | 60.0% | |
| TTCAGCAGCTGGAAGAGGCC+AGG | - | chr4.1:15503530-15503549 | MS.gene34874:CDS | 60.0% | |
| ! | CCTCTACGTTGGGAGAGCAC+AGG | - | chr4.1:15502871-15502890 | MS.gene34874:CDS | 60.0% |
| ! | GGGAGAGCACAGGAGACCAA+TGG | - | chr4.1:15502881-15502900 | MS.gene34874:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 15502853 | 15505462 | 15502853 | ID=MS.gene34874 |
| chr4.1 | mRNA | 15502853 | 15505462 | 15502853 | ID=MS.gene34874.t1;Parent=MS.gene34874 |
| chr4.1 | exon | 15504758 | 15505462 | 15504758 | ID=MS.gene34874.t1.exon1;Parent=MS.gene34874.t1 |
| chr4.1 | CDS | 15504758 | 15505462 | 15504758 | ID=cds.MS.gene34874.t1;Parent=MS.gene34874.t1 |
| chr4.1 | exon | 15502853 | 15504127 | 15502853 | ID=MS.gene34874.t1.exon2;Parent=MS.gene34874.t1 |
| chr4.1 | CDS | 15502853 | 15504127 | 15502853 | ID=cds.MS.gene34874.t1;Parent=MS.gene34874.t1 |
| Gene Sequence |
| Protein sequence |
