Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08264.t1 | XP_013446521.1 | 94.8 | 660 | 33 | 1 | 1 | 659 | 1 | 660 | 0.00E+00 | 1092 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08264.t1 | A0A072TUM3 | 94.8 | 660 | 33 | 1 | 1 | 659 | 1 | 660 | 0.0e+00 | 1092.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene08264 | 0.853479 | 2.33E-61 | -1.69E-46 |
| MS.gene049153 | MS.gene08264 | 0.85408 | 1.56E-61 | -1.69E-46 |
| MS.gene04933 | MS.gene08264 | 0.800809 | 1.21E-48 | -1.69E-46 |
| MS.gene049356 | MS.gene08264 | 0.803869 | 2.84E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene08264 | 0.801229 | 9.94E-49 | -1.69E-46 |
| MS.gene049488 | MS.gene08264 | 0.839371 | 1.65E-57 | -1.69E-46 |
| MS.gene049910 | MS.gene08264 | 0.823209 | 1.57E-53 | -1.69E-46 |
| MS.gene049993 | MS.gene08264 | 0.865887 | 4.26E-65 | -1.69E-46 |
| MS.gene050168 | MS.gene08264 | 0.815631 | 8.37E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene08264 | 0.801895 | 7.26E-49 | -1.69E-46 |
| MS.gene050426 | MS.gene08264 | -0.833046 | 6.68E-56 | -1.69E-46 |
| MS.gene050464 | MS.gene08264 | 0.816669 | 4.91E-52 | -1.69E-46 |
| MS.gene050640 | MS.gene08264 | 0.802956 | 4.39E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene08264 | 0.84645 | 2.16E-59 | -1.69E-46 |
| MS.gene050820 | MS.gene08264 | 0.800908 | 1.16E-48 | -1.69E-46 |
| MS.gene050971 | MS.gene08264 | 0.802182 | 6.34E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene08264 | 0.855124 | 7.79E-62 | -1.69E-46 |
| MS.gene051568 | MS.gene08264 | 0.818821 | 1.60E-52 | -1.69E-46 |
| MS.gene051582 | MS.gene08264 | 0.823578 | 1.28E-53 | -1.69E-46 |
| MS.gene051588 | MS.gene08264 | 0.852579 | 4.21E-61 | -1.69E-46 |
| MS.gene051860 | MS.gene08264 | 0.843052 | 1.78E-58 | -1.69E-46 |
| MS.gene051983 | MS.gene08264 | 0.842853 | 2.01E-58 | -1.69E-46 |
| MS.gene052011 | MS.gene08264 | -0.88153 | 2.22E-70 | -1.69E-46 |
| MS.gene052077 | MS.gene08264 | 0.846118 | 2.66E-59 | -1.69E-46 |
| MS.gene052135 | MS.gene08264 | 0.814447 | 1.53E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene08264 | 0.842906 | 1.94E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene08264 | 0.854177 | 1.46E-61 | -1.69E-46 |
| MS.gene052255 | MS.gene08264 | 0.812425 | 4.27E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene08264 | 0.827438 | 1.56E-54 | -1.69E-46 |
| MS.gene052414 | MS.gene08264 | 0.822027 | 2.95E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene08264 | 0.81482 | 1.27E-51 | -1.69E-46 |
| MS.gene053169 | MS.gene08264 | 0.805109 | 1.56E-49 | -1.69E-46 |
| MS.gene05316 | MS.gene08264 | 0.821848 | 3.25E-53 | -1.69E-46 |
| MS.gene053330 | MS.gene08264 | 0.80413 | 2.50E-49 | -1.69E-46 |
| MS.gene053494 | MS.gene08264 | 0.830324 | 3.13E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene08264 | 0.831633 | 1.49E-55 | -1.69E-46 |
| MS.gene053873 | MS.gene08264 | 0.806463 | 8.13E-50 | -1.69E-46 |
| MS.gene053928 | MS.gene08264 | 0.801932 | 7.13E-49 | -1.69E-46 |
| MS.gene054010 | MS.gene08264 | 0.807103 | 5.95E-50 | -1.69E-46 |
| MS.gene054011 | MS.gene08264 | 0.806502 | 7.97E-50 | -1.69E-46 |
| MS.gene054012 | MS.gene08264 | 0.802108 | 6.56E-49 | -1.69E-46 |
| MS.gene054102 | MS.gene08264 | 0.854764 | 9.90E-62 | -1.69E-46 |
| MS.gene054108 | MS.gene08264 | 0.830352 | 3.08E-55 | -1.69E-46 |
| MS.gene05413 | MS.gene08264 | 0.822417 | 2.40E-53 | -1.69E-46 |
| MS.gene054173 | MS.gene08264 | 0.807732 | 4.38E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene08264 | 0.913878 | 3.69E-84 | -1.69E-46 |
| MS.gene054349 | MS.gene08264 | 0.871141 | 8.57E-67 | -1.69E-46 |
| MS.gene054556 | MS.gene08264 | 0.841817 | 3.77E-58 | -1.69E-46 |
| MS.gene054719 | MS.gene08264 | 0.868184 | 7.88E-66 | -1.69E-46 |
| MS.gene054918 | MS.gene08264 | 0.820758 | 5.79E-53 | -1.69E-46 |
| MS.gene054920 | MS.gene08264 | 0.838045 | 3.63E-57 | -1.69E-46 |
| MS.gene054930 | MS.gene08264 | 0.818679 | 1.73E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene08264 | 0.842028 | 3.32E-58 | -1.69E-46 |
| MS.gene055217 | MS.gene08264 | 0.806874 | 6.65E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene08264 | 0.818289 | 2.12E-52 | -1.69E-46 |
| MS.gene055369 | MS.gene08264 | 0.859681 | 3.49E-63 | -1.69E-46 |
| MS.gene055539 | MS.gene08264 | 0.812411 | 4.30E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene08264 | 0.866807 | 2.18E-65 | -1.69E-46 |
| MS.gene055601 | MS.gene08264 | -0.807859 | 4.11E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene08264 | 0.841717 | 4.01E-58 | -1.69E-46 |
| MS.gene055701 | MS.gene08264 | 0.81633 | 5.85E-52 | -1.69E-46 |
| MS.gene055744 | MS.gene08264 | 0.803015 | 4.27E-49 | -1.69E-46 |
| MS.gene05594 | MS.gene08264 | 0.838943 | 2.13E-57 | -1.69E-46 |
| MS.gene056337 | MS.gene08264 | 0.817537 | 3.13E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene08264 | 0.831899 | 1.29E-55 | -1.69E-46 |
| MS.gene056514 | MS.gene08264 | 0.865939 | 4.10E-65 | -1.69E-46 |
| MS.gene056659 | MS.gene08264 | 0.858646 | 7.14E-63 | -1.69E-46 |
| MS.gene056723 | MS.gene08264 | 0.877161 | 7.85E-69 | -1.69E-46 |
| MS.gene056899 | MS.gene08264 | -0.845142 | 4.88E-59 | -1.69E-46 |
| MS.gene056979 | MS.gene08264 | 0.82978 | 4.25E-55 | -1.69E-46 |
| MS.gene05702 | MS.gene08264 | 0.835864 | 1.31E-56 | -1.69E-46 |
| MS.gene057124 | MS.gene08264 | 0.80424 | 2.38E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene08264 | 0.849441 | 3.23E-60 | -1.69E-46 |
| MS.gene057448 | MS.gene08264 | 0.822904 | 1.85E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene08264 | 0.802279 | 6.05E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene08264 | 0.811143 | 8.11E-51 | -1.69E-46 |
| MS.gene057469 | MS.gene08264 | 0.836988 | 6.78E-57 | -1.69E-46 |
| MS.gene057476 | MS.gene08264 | 0.860972 | 1.42E-63 | -1.69E-46 |
| MS.gene057749 | MS.gene08264 | 0.884866 | 1.33E-71 | -1.69E-46 |
| MS.gene057750 | MS.gene08264 | 0.801728 | 7.85E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene08264 | 0.87681 | 1.04E-68 | -1.69E-46 |
| MS.gene057824 | MS.gene08264 | 0.835372 | 1.74E-56 | -1.69E-46 |
| MS.gene057825 | MS.gene08264 | 0.877799 | 4.70E-69 | -1.69E-46 |
| MS.gene057826 | MS.gene08264 | 0.84967 | 2.79E-60 | -1.69E-46 |
| MS.gene057888 | MS.gene08264 | 0.821207 | 4.57E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene08264 | 0.832865 | 7.40E-56 | -1.69E-46 |
| MS.gene058007 | MS.gene08264 | 0.81245 | 4.21E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene08264 | 0.856218 | 3.73E-62 | -1.69E-46 |
| MS.gene058218 | MS.gene08264 | -0.800739 | 1.25E-48 | -1.69E-46 |
| MS.gene058220 | MS.gene08264 | 0.829405 | 5.24E-55 | -1.69E-46 |
| MS.gene058700 | MS.gene08264 | 0.817652 | 2.95E-52 | -1.69E-46 |
| MS.gene058710 | MS.gene08264 | 0.835768 | 1.38E-56 | -1.69E-46 |
| MS.gene05872 | MS.gene08264 | 0.803896 | 2.80E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene08264 | 0.863619 | 2.19E-64 | -1.69E-46 |
| MS.gene058928 | MS.gene08264 | 0.836099 | 1.14E-56 | -1.69E-46 |
| MS.gene058949 | MS.gene08264 | 0.85759 | 1.47E-62 | -1.69E-46 |
| MS.gene058995 | MS.gene08264 | 0.800528 | 1.38E-48 | -1.69E-46 |
| MS.gene059011 | MS.gene08264 | 0.854367 | 1.29E-61 | -1.69E-46 |
| MS.gene059043 | MS.gene08264 | -0.805401 | 1.36E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene08264 | 0.839779 | 1.29E-57 | -1.69E-46 |
| MS.gene059082 | MS.gene08264 | 0.823283 | 1.51E-53 | -1.69E-46 |
| MS.gene059141 | MS.gene08264 | 0.844597 | 6.85E-59 | -1.69E-46 |
| MS.gene059285 | MS.gene08264 | 0.855001 | 8.45E-62 | -1.69E-46 |
| MS.gene059294 | MS.gene08264 | 0.807583 | 4.71E-50 | -1.69E-46 |
| MS.gene059366 | MS.gene08264 | 0.817355 | 3.44E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene08264 | 0.91325 | 7.65E-84 | -1.69E-46 |
| MS.gene059462 | MS.gene08264 | 0.852835 | 3.56E-61 | -1.69E-46 |
| MS.gene059597 | MS.gene08264 | 0.806807 | 6.88E-50 | -1.69E-46 |
| MS.gene059609 | MS.gene08264 | 0.811667 | 6.24E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene08264 | 0.803192 | 3.92E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene08264 | 0.813945 | 1.98E-51 | -1.69E-46 |
| MS.gene059868 | MS.gene08264 | 0.825914 | 3.61E-54 | -1.69E-46 |
| MS.gene059876 | MS.gene08264 | 0.831967 | 1.24E-55 | -1.69E-46 |
| MS.gene059958 | MS.gene08264 | 0.844646 | 6.65E-59 | -1.69E-46 |
| MS.gene060038 | MS.gene08264 | 0.826795 | 2.23E-54 | -1.69E-46 |
| MS.gene060247 | MS.gene08264 | 0.867354 | 1.46E-65 | -1.69E-46 |
| MS.gene060403 | MS.gene08264 | 0.806876 | 6.65E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene08264 | 0.849055 | 4.13E-60 | -1.69E-46 |
| MS.gene061114 | MS.gene08264 | -0.866056 | 3.77E-65 | -1.69E-46 |
| MS.gene061154 | MS.gene08264 | 0.819188 | 1.32E-52 | -1.69E-46 |
| MS.gene061159 | MS.gene08264 | 0.875921 | 2.10E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08264.t1 | MTR_8g080080 | 94.545 | 660 | 35 | 1 | 1 | 659 | 1 | 660 | 0.0 | 1298 |
| MS.gene08264.t1 | MTR_3g085830 | 58.140 | 688 | 235 | 19 | 1 | 658 | 1 | 665 | 0.0 | 733 |
| MS.gene08264.t1 | MTR_6g022830 | 48.271 | 665 | 305 | 16 | 1 | 635 | 1 | 656 | 0.0 | 538 |
| MS.gene08264.t1 | MTR_6g023070 | 44.781 | 594 | 287 | 15 | 67 | 635 | 16 | 593 | 6.36e-139 | 419 |
| MS.gene08264.t1 | MTR_7g117620 | 28.819 | 288 | 169 | 7 | 99 | 382 | 40 | 295 | 4.39e-18 | 88.6 |
| MS.gene08264.t1 | MTR_2g096190 | 25.887 | 282 | 172 | 8 | 106 | 382 | 31 | 280 | 1.87e-15 | 80.1 |
| MS.gene08264.t1 | MTR_2g096190 | 30.769 | 195 | 119 | 3 | 102 | 296 | 66 | 244 | 7.33e-15 | 78.2 |
| MS.gene08264.t1 | MTR_2g096190 | 27.957 | 186 | 116 | 4 | 221 | 405 | 101 | 269 | 1.03e-12 | 71.6 |
| MS.gene08264.t1 | MTR_7g100390 | 27.686 | 242 | 140 | 5 | 106 | 345 | 53 | 261 | 4.40e-15 | 79.0 |
| MS.gene08264.t1 | MTR_4g062100 | 25.943 | 212 | 139 | 3 | 188 | 399 | 108 | 301 | 1.62e-14 | 77.0 |
| MS.gene08264.t1 | MTR_7g100430 | 30.808 | 198 | 119 | 6 | 189 | 386 | 162 | 341 | 1.93e-14 | 77.0 |
| MS.gene08264.t1 | MTR_7g100430 | 26.515 | 264 | 161 | 10 | 133 | 385 | 65 | 306 | 2.55e-12 | 70.5 |
| MS.gene08264.t1 | MTR_2g101310 | 27.717 | 184 | 109 | 4 | 220 | 382 | 139 | 319 | 1.95e-13 | 73.9 |
| MS.gene08264.t1 | MTR_2g101310 | 27.717 | 184 | 109 | 4 | 220 | 382 | 139 | 319 | 3.28e-13 | 72.8 |
| MS.gene08264.t1 | MTR_1g115575 | 28.636 | 220 | 129 | 5 | 102 | 320 | 131 | 323 | 1.47e-12 | 71.2 |
| MS.gene08264.t1 | MTR_1g115575 | 26.667 | 285 | 177 | 8 | 105 | 389 | 100 | 352 | 5.29e-12 | 69.3 |
| MS.gene08264.t1 | MTR_2g101320 | 27.717 | 184 | 109 | 5 | 220 | 382 | 139 | 319 | 5.97e-12 | 69.3 |
| MS.gene08264.t1 | MTR_5g026800 | 32.022 | 178 | 92 | 7 | 175 | 352 | 10 | 158 | 6.85e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08264.t1 | AT3G01750 | 49.483 | 580 | 264 | 8 | 1 | 559 | 1 | 572 | 0.0 | 537 |
| MS.gene08264.t1 | AT3G01750 | 49.483 | 580 | 264 | 8 | 1 | 559 | 1 | 572 | 0.0 | 537 |
| MS.gene08264.t1 | AT3G04140 | 43.769 | 674 | 320 | 18 | 1 | 650 | 1 | 639 | 1.81e-161 | 479 |
| MS.gene08264.t1 | AT2G31820 | 28.125 | 288 | 171 | 7 | 99 | 382 | 148 | 403 | 6.26e-18 | 88.6 |
| MS.gene08264.t1 | AT1G07710 | 25.887 | 282 | 174 | 8 | 105 | 382 | 30 | 280 | 3.52e-15 | 79.3 |
| MS.gene08264.t1 | AT1G07710 | 30.151 | 199 | 120 | 5 | 98 | 296 | 99 | 278 | 2.08e-13 | 73.6 |
| MS.gene08264.t1 | AT1G07710 | 26.147 | 218 | 144 | 4 | 188 | 405 | 69 | 269 | 3.25e-13 | 73.2 |
| MS.gene08264.t1 | AT1G07710 | 31.980 | 197 | 114 | 5 | 102 | 296 | 66 | 244 | 4.90e-13 | 72.4 |
| MS.gene08264.t1 | AT1G07710 | 25.887 | 282 | 174 | 8 | 105 | 382 | 30 | 280 | 3.52e-15 | 79.3 |
| MS.gene08264.t1 | AT1G07710 | 30.151 | 199 | 120 | 5 | 98 | 296 | 99 | 278 | 2.08e-13 | 73.6 |
| MS.gene08264.t1 | AT1G07710 | 26.147 | 218 | 144 | 4 | 188 | 405 | 69 | 269 | 3.25e-13 | 73.2 |
| MS.gene08264.t1 | AT1G07710 | 31.980 | 197 | 114 | 5 | 102 | 296 | 66 | 244 | 4.90e-13 | 72.4 |
| MS.gene08264.t1 | AT5G02620 | 28.061 | 196 | 121 | 5 | 188 | 382 | 94 | 270 | 6.10e-13 | 72.0 |
| MS.gene08264.t1 | AT5G02620 | 28.061 | 196 | 121 | 5 | 188 | 382 | 94 | 270 | 6.10e-13 | 72.0 |
| MS.gene08264.t1 | AT5G02620 | 28.061 | 196 | 121 | 5 | 188 | 382 | 94 | 270 | 6.10e-13 | 72.0 |
| MS.gene08264.t1 | AT5G02620 | 31.250 | 160 | 91 | 4 | 188 | 346 | 94 | 235 | 6.17e-12 | 68.9 |
| MS.gene08264.t1 | AT5G02620 | 31.250 | 160 | 91 | 4 | 188 | 346 | 94 | 235 | 6.17e-12 | 68.9 |
| MS.gene08264.t1 | AT5G54610 | 25.714 | 210 | 144 | 5 | 184 | 391 | 36 | 235 | 9.47e-12 | 68.2 |
| MS.gene08264.t1 | AT3G09550 | 28.796 | 191 | 118 | 5 | 188 | 378 | 181 | 353 | 1.39e-11 | 68.2 |
| MS.gene08264.t1 | AT3G09550 | 28.796 | 191 | 118 | 5 | 188 | 378 | 181 | 353 | 1.39e-11 | 68.2 |
| MS.gene08264.t1 | AT3G09550 | 28.796 | 191 | 118 | 5 | 188 | 378 | 188 | 360 | 1.56e-11 | 67.8 |
| MS.gene08264.t1 | AT1G03670 | 35.606 | 132 | 75 | 4 | 183 | 306 | 35 | 164 | 2.19e-11 | 67.4 |
| MS.gene08264.t1 | AT5G60070 | 27.928 | 222 | 131 | 6 | 190 | 404 | 113 | 312 | 2.24e-11 | 67.4 |
| MS.gene08264.t1 | AT5G60070 | 29.231 | 195 | 123 | 3 | 102 | 296 | 73 | 252 | 3.67e-11 | 66.6 |
| MS.gene08264.t1 | AT2G01680 | 27.778 | 198 | 125 | 5 | 197 | 393 | 70 | 250 | 4.07e-11 | 66.2 |
Find 101 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGACTAGTGGTGTTAAT+TGG | 0.207448 | 4.2:-15048888 | MS.gene08264:CDS |
| AAGAATTTCCAATCTCATTA+AGG | 0.276743 | 4.2:-15048744 | MS.gene08264:CDS |
| TGCTGCTTCTGCTGGTGATT+TGG | 0.292656 | 4.2:-15050618 | MS.gene08264:CDS |
| ATCATCGTCTTCAAATTCTA+AGG | 0.293118 | 4.2:+15048807 | None:intergenic |
| GGACTGCCCTCTTGCTCTTC+CGG | 0.294862 | 4.2:-15048526 | MS.gene08264:CDS |
| TCTCTCATTCGTGGTGGATA+TGG | 0.311166 | 4.2:-15050659 | MS.gene08264:CDS |
| TATCTTTGCCTTAATGAGAT+TGG | 0.319231 | 4.2:+15048736 | None:intergenic |
| CCTAATGCAAGGTGTAATTA+AGG | 0.327932 | 4.2:-15048620 | MS.gene08264:CDS |
| TCAGTAGAGTTTACAATATC+AGG | 0.332328 | 4.2:+15049579 | None:intergenic |
| TGATATTCTAAATGAAGTTC+CGG | 0.337345 | 4.2:+15049029 | None:intergenic |
| ACAAAAGAACACTATCTATA+AGG | 0.350958 | 4.2:-15048687 | MS.gene08264:CDS |
| TTGAAAACTCGTCATGGTAT+TGG | 0.358691 | 4.2:-15049060 | MS.gene08264:CDS |
| CTCCTTATAGTTCAACTGTT+GGG | 0.368527 | 4.2:+15048483 | None:intergenic |
| CCTTAATTACACCTTGCATT+AGG | 0.369020 | 4.2:+15048620 | None:intergenic |
| AGATTGTGGTATTGTTGAAT+TGG | 0.372361 | 4.2:-15050450 | MS.gene08264:CDS |
| TTGTATACTGCTGCTTCTGC+TGG | 0.379152 | 4.2:-15050626 | MS.gene08264:CDS |
| TTAATAATTCTGTAAGTTCA+AGG | 0.385745 | 4.2:-15048780 | MS.gene08264:CDS |
| TTTCTTCATATGGCAGTGTA+TGG | 0.393239 | 4.2:-15049438 | MS.gene08264:CDS |
| CTGCTGCTAGAGGAGGGAAT+TGG | 0.395808 | 4.2:-15050370 | MS.gene08264:CDS |
| TGCTGCTAGAGGAGGGAATT+GGG | 0.409718 | 4.2:-15050369 | MS.gene08264:CDS |
| AATTCAGAAGATCTTGATCT+TGG | 0.413086 | 4.2:+15049162 | None:intergenic |
| TTCTTACTTTCCTCTACGTT+GGG | 0.414168 | 4.2:-15050933 | MS.gene08264:CDS |
| TGGAGCACAAGGGCAGGCTT+TGG | 0.420864 | 4.2:-15048419 | MS.gene08264:CDS |
| CAAGACTAGTGGTGTTAATT+GGG | 0.421578 | 4.2:-15048887 | MS.gene08264:CDS |
| GTTGAGAAGAGATTCTTTGT+TGG | 0.423804 | 4.2:-15050579 | MS.gene08264:CDS |
| TTTGCAGCTGCTAAATCAAT+AGG | 0.426019 | 4.2:+15050878 | None:intergenic |
| TTGGATGAAGGTGGTGGTGG+TGG | 0.428570 | 4.2:-15050431 | MS.gene08264:CDS |
| GTGTATGGTTTCATAAATCC+TGG | 0.431340 | 4.2:-15049423 | MS.gene08264:CDS |
| TCAAGAGGGAGATAATGAAT+AGG | 0.434364 | 4.2:-15050403 | MS.gene08264:CDS |
| ATCAATGTCATGAACAATGT+TGG | 0.435421 | 4.2:-15049321 | MS.gene08264:CDS |
| AAAAGTGTCTCCATTGTGAT+TGG | 0.439400 | 4.2:+15049458 | None:intergenic |
| TACCCAACAGTTGAACTATA+AGG | 0.443698 | 4.2:-15048485 | MS.gene08264:CDS |
| GATATTCTAAATGAAGTTCC+GGG | 0.452704 | 4.2:+15049030 | None:intergenic |
| CAAGAGGGAGATAATGAATA+GGG | 0.454391 | 4.2:-15050402 | MS.gene08264:CDS |
| GAATTGGATGAAGGTGGTGG+TGG | 0.455900 | 4.2:-15050434 | MS.gene08264:CDS |
| TGCTCTTCCGGACCAATAGA+TGG | 0.463195 | 4.2:-15048514 | MS.gene08264:CDS |
| CGAAAAGGTTGCGAACATAA+AGG | 0.466998 | 4.2:-15049349 | MS.gene08264:CDS |
| TGAGAAGATTTGTATCATGA+TGG | 0.469922 | 4.2:+15050825 | None:intergenic |
| GGTATTGTTGAATTGGATGA+AGG | 0.476941 | 4.2:-15050443 | MS.gene08264:CDS |
| TCAATGTCATGAACAATGTT+GGG | 0.477167 | 4.2:-15049320 | MS.gene08264:CDS |
| TGAGTTATTACTAACCGAAA+AGG | 0.479208 | 4.2:-15049364 | MS.gene08264:CDS |
| ACTGTCTTGCATTCAGCAGC+TGG | 0.480625 | 4.2:-15050275 | MS.gene08264:CDS |
| TTGTCTTATAGAGATGTTCA+AGG | 0.483573 | 4.2:-15050302 | MS.gene08264:CDS |
| CTTAACATTCGCGACGCAGA+TGG | 0.490419 | 4.2:-15049216 | MS.gene08264:CDS |
| TCTCCTTATAGTTCAACTGT+TGG | 0.494101 | 4.2:+15048482 | None:intergenic |
| ATTGATTTAGCAGCTGCAAA+TGG | 0.494631 | 4.2:-15050875 | MS.gene08264:CDS |
| CTTCTTACTTTCCTCTACGT+TGG | 0.504888 | 4.2:-15050934 | MS.gene08264:CDS |
| TTGCATTCAGCAGCTGGAAG+AGG | 0.512797 | 4.2:-15050269 | MS.gene08264:CDS |
| AGCTGGAAGAGGCCAGGTTG+AGG | 0.513559 | 4.2:-15050258 | MS.gene08264:intron |
| GAGTGTGAAGAAACAGCAAC+AGG | 0.514596 | 4.2:-15050689 | MS.gene08264:CDS |
| CACAAACATGTTGATACACT+GGG | 0.530524 | 4.2:-15048547 | MS.gene08264:CDS |
| CTCATTCGTGGTGGATATGG+TGG | 0.531172 | 4.2:-15050656 | MS.gene08264:CDS |
| TTCAGCAGCTGGAAGAGGCC+AGG | 0.531435 | 4.2:-15050264 | MS.gene08264:CDS |
| AAAACTCGTCATGGTATTGG+AGG | 0.532617 | 4.2:-15049057 | MS.gene08264:CDS |
| CATGGTATTGGAGGTAGTCC+CGG | 0.533373 | 4.2:-15049048 | MS.gene08264:CDS |
| GCACAAACATGTTGATACAC+TGG | 0.533788 | 4.2:-15048548 | MS.gene08264:CDS |
| ATTGGTTAACTTTGTTAGTG+AGG | 0.537838 | 4.2:+15049476 | None:intergenic |
| TTGGTTAACTTTGTTAGTGA+GGG | 0.539818 | 4.2:+15049477 | None:intergenic |
| CTTCCGGACCAATAGATGGT+GGG | 0.540457 | 4.2:-15048510 | MS.gene08264:CDS |
| TTCCGGACCAATAGATGGTG+GGG | 0.545341 | 4.2:-15048509 | MS.gene08264:CDS |
| GTGTTAATTGGGCCGCGAGA+CGG | 0.548204 | 4.2:-15048876 | MS.gene08264:CDS |
| ATCCATGCTGCTGCTAGAGG+AGG | 0.556428 | 4.2:-15050377 | MS.gene08264:CDS |
| CCTCTACGTTGGGAGAGCAC+AGG | 0.559069 | 4.2:-15050923 | MS.gene08264:CDS |
| TAGGTGTTGCATACCACCAT+TGG | 0.559115 | 4.2:+15050897 | None:intergenic |
| GGAACAAACTCTCTCATTCG+TGG | 0.569551 | 4.2:-15050668 | MS.gene08264:CDS |
| TTGTCTAGTCTGCAGAAACC+AGG | 0.572724 | 4.2:+15049405 | None:intergenic |
| CAACGTAGAGGAAAGTAAGA+AGG | 0.582105 | 4.2:+15050935 | None:intergenic |
| GCTATCCATGCTGCTGCTAG+AGG | 0.583266 | 4.2:-15050380 | MS.gene08264:CDS |
| TCCCTCCTCTAGCAGCAGCA+TGG | 0.591302 | 4.2:+15050375 | None:intergenic |
| GCTCTCTTAGGAAAAGATTG+TGG | 0.593730 | 4.2:-15050464 | MS.gene08264:CDS |
| TTGAAGATGTTGCAAAGTGT+AGG | 0.602447 | 4.2:-15050739 | MS.gene08264:CDS |
| TTACAGAGGTTACCTTCATG+TGG | 0.604215 | 4.2:-15049523 | MS.gene08264:CDS |
| TTACATGTGGCTTCTTACAG+AGG | 0.607361 | 4.2:-15049537 | MS.gene08264:CDS |
| TATTGGTCCGGAAGAGCAAG+AGG | 0.608650 | 4.2:+15048519 | None:intergenic |
| TCTTCCGGACCAATAGATGG+TGG | 0.609522 | 4.2:-15048511 | MS.gene08264:CDS |
| GTTGAATTGGATGAAGGTGG+TGG | 0.611508 | 4.2:-15050437 | MS.gene08264:CDS |
| TCCGGACCAATAGATGGTGG+GGG | 0.614815 | 4.2:-15048508 | MS.gene08264:CDS |
| TCCATGCTGCTGCTAGAGGA+GGG | 0.615437 | 4.2:-15050376 | MS.gene08264:CDS |
| ACTCATTTGAAAACTCGTCA+TGG | 0.623099 | 4.2:-15049066 | MS.gene08264:CDS |
| TTCACAGCAGGCCTAATGCA+AGG | 0.623668 | 4.2:-15048631 | MS.gene08264:CDS |
| TTCGTGGTGGATATGGTGGA+TGG | 0.624766 | 4.2:-15050652 | MS.gene08264:CDS |
| TGTGAGTACTTACCTCAACC+TGG | 0.625786 | 4.2:+15050246 | None:intergenic |
| TTAGAATCTCTACCACATGA+AGG | 0.626407 | 4.2:+15049511 | None:intergenic |
| ATTGTTGAATTGGATGAAGG+TGG | 0.627731 | 4.2:-15050440 | MS.gene08264:CDS |
| GGGAGAGCACAGGAGACCAA+TGG | 0.629721 | 4.2:-15050913 | MS.gene08264:CDS |
| AGCTAGGAGTAAGAATTCTG+AGG | 0.643118 | 4.2:-15050510 | MS.gene08264:CDS |
| GTGGTGGTGGAGATTTCAAG+AGG | 0.643581 | 4.2:-15050418 | MS.gene08264:CDS |
| ACTAGTCTTGCTGTTACATG+AGG | 0.645032 | 4.2:+15048900 | None:intergenic |
| TCATGTAACAGCAAGACTAG+TGG | 0.650511 | 4.2:-15048898 | MS.gene08264:CDS |
| TCGTCGACTAGAAACTGTGT+GGG | 0.654713 | 4.2:-15050777 | MS.gene08264:CDS |
| GGTTAATGAATCTTCTCAAG+TGG | 0.655449 | 4.2:-15048855 | MS.gene08264:CDS |
| CCTGTGCTCTCCCAACGTAG+AGG | 0.659563 | 4.2:+15050923 | None:intergenic |
| ACAAAGTTAACCAATCACAA+TGG | 0.661701 | 4.2:-15049468 | MS.gene08264:CDS |
| TGGTGGTGGAGATTTCAAGA+GGG | 0.666190 | 4.2:-15050417 | MS.gene08264:CDS |
| AGAGCACAGGAGACCAATGG+TGG | 0.668331 | 4.2:-15050910 | MS.gene08264:CDS |
| ACAAACTCTCTCATTCGTGG+TGG | 0.676010 | 4.2:-15050665 | MS.gene08264:CDS |
| TTCGTCGACTAGAAACTGTG+TGG | 0.676029 | 4.2:-15050778 | MS.gene08264:CDS |
| GTAAACTCTACTGATGCACA+AGG | 0.676230 | 4.2:-15049570 | MS.gene08264:CDS |
| AGGTAATGCAGCATTACATG+TGG | 0.677340 | 4.2:-15049550 | MS.gene08264:CDS |
| ATTGGTCCGGAAGAGCAAGA+GGG | 0.694634 | 4.2:+15048520 | None:intergenic |
| AAGATTCATTAACCGTCTCG+CGG | 0.701144 | 4.2:+15048864 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTAATAATAGTTTGAAAAT+TGG | - | chr4.2:15049206-15049225 | MS.gene08264:CDS | 15.0% |
| !!! | ATTTTAGAGACAAAATTATA+TGG | + | chr4.2:15049351-15049370 | None:intergenic | 15.0% |
| !!! | TATAATTTTGTTAATTTCAG+TGG | - | chr4.2:15049489-15049508 | MS.gene08264:CDS | 15.0% |
| !! | AATGAAATAATTAATGATGC+AGG | - | chr4.2:15049667-15049686 | MS.gene08264:intron | 20.0% |
| !! | ACAAAATTATATGGTTTCTA+GGG | + | chr4.2:15049342-15049361 | None:intergenic | 20.0% |
| !! | TTAATAATTCTGTAAGTTCA+AGG | - | chr4.2:15050515-15050534 | MS.gene08264:CDS | 20.0% |
| !!! | ATAGGGAATTTTCATTTTTA+GGG | - | chr4.2:15049459-15049478 | MS.gene08264:CDS | 20.0% |
| !!! | ATGAACAAGTATTTTTCTTT+TGG | - | chr4.2:15050856-15050875 | MS.gene08264:CDS | 20.0% |
| !!! | CTTTTTTTCAAATAATCAAG+AGG | + | chr4.2:15050112-15050131 | None:intergenic | 20.0% |
| ! | AAGAATTTCCAATCTCATTA+AGG | - | chr4.2:15050551-15050570 | MS.gene08264:CDS | 25.0% |
| ! | AAGTTCAAGGAAAAATGATT+TGG | - | chr4.2:15050528-15050547 | MS.gene08264:CDS | 25.0% |
| ! | ACAAAAGAACACTATCTATA+AGG | - | chr4.2:15050608-15050627 | MS.gene08264:CDS | 25.0% |
| ! | ACAGTTAATACTACATAATC+TGG | - | chr4.2:15049584-15049603 | MS.gene08264:CDS | 25.0% |
| ! | ACCAACTTTATAATGTGATA+GGG | - | chr4.2:15049442-15049461 | MS.gene08264:CDS | 25.0% |
| ! | CAGTTAATACTACATAATCT+GGG | - | chr4.2:15049585-15049604 | MS.gene08264:CDS | 25.0% |
| ! | GACAAAATTATATGGTTTCT+AGG | + | chr4.2:15049343-15049362 | None:intergenic | 25.0% |
| ! | TGATATTCTAAATGAAGTTC+CGG | + | chr4.2:15050269-15050288 | None:intergenic | 25.0% |
| !! | GATCGAAAATTTTCAATTTC+AGG | + | chr4.2:15049396-15049415 | None:intergenic | 25.0% |
| !!! | GATAGGGAATTTTCATTTTT+AGG | - | chr4.2:15049458-15049477 | MS.gene08264:CDS | 25.0% |
| !!! | GTGAAATATTTTTTTGCAGA+TGG | + | chr4.2:15050649-15050668 | None:intergenic | 25.0% |
| AAGGTAAAGACACAAAAAGA+AGG | - | chr4.2:15050694-15050713 | MS.gene08264:CDS | 30.0% | |
| AATTCAGAAGATCTTGATCT+TGG | + | chr4.2:15050136-15050155 | None:intergenic | 30.0% | |
| ACAAAGTTAACCAATCACAA+TGG | - | chr4.2:15049827-15049846 | MS.gene08264:intron | 30.0% | |
| ACTCAGATTAAAAACGTATC+CGG | + | chr4.2:15049289-15049308 | None:intergenic | 30.0% | |
| AGATTGTGGTATTGTTGAAT+TGG | - | chr4.2:15048845-15048864 | MS.gene08264:CDS | 30.0% | |
| AGGTAAAGACACAAAAAGAA+GGG | - | chr4.2:15050695-15050714 | MS.gene08264:CDS | 30.0% | |
| ATCAATGTCATGAACAATGT+TGG | - | chr4.2:15049974-15049993 | MS.gene08264:intron | 30.0% | |
| ATCATCGTCTTCAAATTCTA+AGG | + | chr4.2:15050491-15050510 | None:intergenic | 30.0% | |
| ATTGGTTAACTTTGTTAGTG+AGG | + | chr4.2:15049822-15049841 | None:intergenic | 30.0% | |
| CTACATAATCTGGGAATAAA+AGG | - | chr4.2:15049594-15049613 | MS.gene08264:CDS | 30.0% | |
| GAAATAATTAATGATGCAGG+TGG | - | chr4.2:15049670-15049689 | MS.gene08264:intron | 30.0% | |
| GACCAACTTTATAATGTGAT+AGG | - | chr4.2:15049441-15049460 | MS.gene08264:CDS | 30.0% | |
| GATATTCTAAATGAAGTTCC+GGG | + | chr4.2:15050268-15050287 | None:intergenic | 30.0% | |
| GCAAAAAAATATTTCACAGC+AGG | - | chr4.2:15050652-15050671 | MS.gene08264:CDS | 30.0% | |
| TATCTTTGCCTTAATGAGAT+TGG | + | chr4.2:15050562-15050581 | None:intergenic | 30.0% | |
| TCAATGTCATGAACAATGTT+GGG | - | chr4.2:15049975-15049994 | MS.gene08264:intron | 30.0% | |
| TCAGTAGAGTTTACAATATC+AGG | + | chr4.2:15049719-15049738 | None:intergenic | 30.0% | |
| TCCCTATCACATTATAAAGT+TGG | + | chr4.2:15049446-15049465 | None:intergenic | 30.0% | |
| TGAGAAGATTTGTATCATGA+TGG | + | chr4.2:15048473-15048492 | None:intergenic | 30.0% | |
| TGAGTTATTACTAACCGAAA+AGG | - | chr4.2:15049931-15049950 | MS.gene08264:intron | 30.0% | |
| TTGGTTAACTTTGTTAGTGA+GGG | + | chr4.2:15049821-15049840 | None:intergenic | 30.0% | |
| TTGTCTTATAGAGATGTTCA+AGG | - | chr4.2:15048993-15049012 | MS.gene08264:CDS | 30.0% | |
| ! | ATTCTTGATTTTGCTCTCTT+AGG | - | chr4.2:15048819-15048838 | MS.gene08264:CDS | 30.0% |
| !! | ATTTTAGTCCCTCAATACTT+GGG | + | chr4.2:15049528-15049547 | None:intergenic | 30.0% |
| !! | GTCTCTAAAATTGTAGAAGT+AGG | - | chr4.2:15049360-15049379 | MS.gene08264:CDS | 30.0% |
| !!! | AGAGATTCTTTGTTGGTTTT+TGG | - | chr4.2:15048723-15048742 | MS.gene08264:CDS | 30.0% |
| !!! | ATTTTTCTTTTGGAGCACAA+GGG | - | chr4.2:15050866-15050885 | MS.gene08264:CDS | 30.0% |
| !!! | GATAGTGTTCTTTTGTTGTT+TGG | + | chr4.2:15050604-15050623 | None:intergenic | 30.0% |
| !!! | TATTTTTCTTTTGGAGCACA+AGG | - | chr4.2:15050865-15050884 | MS.gene08264:CDS | 30.0% |
| !!! | TATTTTTTTGCAGATGGAGT+TGG | + | chr4.2:15050643-15050662 | None:intergenic | 30.0% |
| AATACTTGGGTAGAGCAATT+CGG | + | chr4.2:15049515-15049534 | None:intergenic | 35.0% | |
| ACTCATTTGAAAACTCGTCA+TGG | - | chr4.2:15050229-15050248 | MS.gene08264:intron | 35.0% | |
| ATTGTTGAATTGGATGAAGG+TGG | - | chr4.2:15048855-15048874 | MS.gene08264:CDS | 35.0% | |
| CAAGAGGGAGATAATGAATA+GGG | - | chr4.2:15048893-15048912 | MS.gene08264:CDS | 35.0% | |
| CACAAACATGTTGATACACT+GGG | - | chr4.2:15050748-15050767 | MS.gene08264:CDS | 35.0% | |
| CATAATCTGGGAATAAAAGG+AGG | - | chr4.2:15049597-15049616 | MS.gene08264:CDS | 35.0% | |
| CCTAATGCAAGGTGTAATTA+AGG | - | chr4.2:15050675-15050694 | MS.gene08264:CDS | 35.0% | |
| CCTTAATTACACCTTGCATT+AGG | + | chr4.2:15050678-15050697 | None:intergenic | 35.0% | |
| CTATGTCACATTCTAAACAC+CGG | - | chr4.2:15049267-15049286 | MS.gene08264:CDS | 35.0% | |
| CTCCTTATAGTTCAACTGTT+GGG | + | chr4.2:15050815-15050834 | None:intergenic | 35.0% | |
| GGTATTGTTGAATTGGATGA+AGG | - | chr4.2:15048852-15048871 | MS.gene08264:CDS | 35.0% | |
| GGTTAATGAATCTTCTCAAG+TGG | - | chr4.2:15050440-15050459 | MS.gene08264:CDS | 35.0% | |
| GTGTATGGTTTCATAAATCC+TGG | - | chr4.2:15049872-15049891 | MS.gene08264:intron | 35.0% | |
| GTTGAGAAGAGATTCTTTGT+TGG | - | chr4.2:15048716-15048735 | MS.gene08264:CDS | 35.0% | |
| TACCCAACAGTTGAACTATA+AGG | - | chr4.2:15050810-15050829 | MS.gene08264:CDS | 35.0% | |
| TCAAGAGGGAGATAATGAAT+AGG | - | chr4.2:15048892-15048911 | MS.gene08264:CDS | 35.0% | |
| TCTCCTTATAGTTCAACTGT+TGG | + | chr4.2:15050816-15050835 | None:intergenic | 35.0% | |
| TTAGAATCTCTACCACATGA+AGG | + | chr4.2:15049787-15049806 | None:intergenic | 35.0% | |
| TTCTTACTTTCCTCTACGTT+GGG | - | chr4.2:15048362-15048381 | MS.gene08264:CDS | 35.0% | |
| TTGAAAACTCGTCATGGTAT+TGG | - | chr4.2:15050235-15050254 | MS.gene08264:intron | 35.0% | |
| TTGAAGATGTTGCAAAGTGT+AGG | - | chr4.2:15048556-15048575 | MS.gene08264:CDS | 35.0% | |
| TTTCTTCATATGGCAGTGTA+TGG | - | chr4.2:15049857-15049876 | MS.gene08264:intron | 35.0% | |
| TTTGCAGCTGCTAAATCAAT+AGG | + | chr4.2:15048420-15048439 | None:intergenic | 35.0% | |
| ! | ATATGTTTTATGCTGCAGCT+AGG | - | chr4.2:15048769-15048788 | MS.gene08264:CDS | 35.0% |
| ! | ATTGATTTAGCAGCTGCAAA+TGG | - | chr4.2:15048420-15048439 | MS.gene08264:CDS | 35.0% |
| ! | CAAGACTAGTGGTGTTAATT+GGG | - | chr4.2:15050408-15050427 | MS.gene08264:CDS | 35.0% |
| ! | CTTTATGTTCGCAACCTTTT+CGG | + | chr4.2:15049948-15049967 | None:intergenic | 35.0% |
| ! | TGGAGACACTTTTCTTCATA+TGG | - | chr4.2:15049847-15049866 | MS.gene08264:intron | 35.0% |
| !! | AAAAGTGTCTCCATTGTGAT+TGG | + | chr4.2:15049840-15049859 | None:intergenic | 35.0% |
| !! | CATTTTAGTCCCTCAATACT+TGG | + | chr4.2:15049529-15049548 | None:intergenic | 35.0% |
| !!! | TCTTTGTTGGTTTTTGGTGA+AGG | - | chr4.2:15048729-15048748 | MS.gene08264:CDS | 35.0% |
| AAGATTCATTAACCGTCTCG+CGG | + | chr4.2:15050434-15050453 | None:intergenic | 40.0% | |
| AGCTAGGAGTAAGAATTCTG+AGG | - | chr4.2:15048785-15048804 | MS.gene08264:CDS | 40.0% | |
| AGGTAATGCAGCATTACATG+TGG | - | chr4.2:15049745-15049764 | MS.gene08264:intron | 40.0% | |
| CAACGTAGAGGAAAGTAAGA+AGG | + | chr4.2:15048363-15048382 | None:intergenic | 40.0% | |
| CGAAAAGGTTGCGAACATAA+AGG | - | chr4.2:15049946-15049965 | MS.gene08264:intron | 40.0% | |
| CTTCTTACTTTCCTCTACGT+TGG | - | chr4.2:15048361-15048380 | MS.gene08264:CDS | 40.0% | |
| GCACAAACATGTTGATACAC+TGG | - | chr4.2:15050747-15050766 | MS.gene08264:CDS | 40.0% | |
| GCTCTCTTAGGAAAAGATTG+TGG | - | chr4.2:15048831-15048850 | MS.gene08264:CDS | 40.0% | |
| GTAAACTCTACTGATGCACA+AGG | - | chr4.2:15049725-15049744 | MS.gene08264:intron | 40.0% | |
| TCATGTAACAGCAAGACTAG+TGG | - | chr4.2:15050397-15050416 | MS.gene08264:CDS | 40.0% | |
| TTACAGAGGTTACCTTCATG+TGG | - | chr4.2:15049772-15049791 | MS.gene08264:intron | 40.0% | |
| TTACATGTGGCTTCTTACAG+AGG | - | chr4.2:15049758-15049777 | MS.gene08264:intron | 40.0% | |
| ! | AAAACTCGTCATGGTATTGG+AGG | - | chr4.2:15050238-15050257 | MS.gene08264:intron | 40.0% |
| ! | ATTGCTCTACCCAAGTATTG+AGG | - | chr4.2:15049516-15049535 | MS.gene08264:CDS | 40.0% |
| ! | CTTGCTATGAAGTTCTGACA+TGG | - | chr4.2:15049167-15049186 | MS.gene08264:CDS | 40.0% |
| ! | GCAAGACTAGTGGTGTTAAT+TGG | - | chr4.2:15050407-15050426 | MS.gene08264:CDS | 40.0% |
| ! | TTTCTAGGGATCATACAAGC+AGG | + | chr4.2:15049328-15049347 | None:intergenic | 40.0% |
| !! | ACTAGTCTTGCTGTTACATG+AGG | + | chr4.2:15050398-15050417 | None:intergenic | 40.0% |
| !! | TTGCTCTACCCAAGTATTGA+GGG | - | chr4.2:15049517-15049536 | MS.gene08264:CDS | 40.0% |
| !!! | GTTTTTGGTGAAGGAGAGTA+TGG | - | chr4.2:15048738-15048757 | MS.gene08264:CDS | 40.0% |
| ACAAACTCTCTCATTCGTGG+TGG | - | chr4.2:15048630-15048649 | MS.gene08264:CDS | 45.0% | |
| GAGTGTGAAGAAACAGCAAC+AGG | - | chr4.2:15048606-15048625 | MS.gene08264:CDS | 45.0% | |
| GGAACAAACTCTCTCATTCG+TGG | - | chr4.2:15048627-15048646 | MS.gene08264:CDS | 45.0% | |
| GGTTGAGGTAAGTACTCACA+TGG | - | chr4.2:15049052-15049071 | MS.gene08264:CDS | 45.0% | |
| GTCAGAACTTCATAGCAAGC+AGG | + | chr4.2:15049166-15049185 | None:intergenic | 45.0% | |
| GTTGAATTGGATGAAGGTGG+TGG | - | chr4.2:15048858-15048877 | MS.gene08264:CDS | 45.0% | |
| TGTGAGTACTTACCTCAACC+TGG | + | chr4.2:15049052-15049071 | None:intergenic | 45.0% | |
| TTGTCTAGTCTGCAGAAACC+AGG | + | chr4.2:15049893-15049912 | None:intergenic | 45.0% | |
| ! | TAGGTGTTGCATACCACCAT+TGG | + | chr4.2:15048401-15048420 | None:intergenic | 45.0% |
| ! | TCGTCGACTAGAAACTGTGT+GGG | - | chr4.2:15048518-15048537 | MS.gene08264:CDS | 45.0% |
| ! | TTCGTCGACTAGAAACTGTG+TGG | - | chr4.2:15048517-15048536 | MS.gene08264:CDS | 45.0% |
| ! | TTGTATACTGCTGCTTCTGC+TGG | - | chr4.2:15048669-15048688 | MS.gene08264:CDS | 45.0% |
| !! | TCTCTCATTCGTGGTGGATA+TGG | - | chr4.2:15048636-15048655 | MS.gene08264:CDS | 45.0% |
| !! | TGGTGGTGGAGATTTCAAGA+GGG | - | chr4.2:15048878-15048897 | MS.gene08264:CDS | 45.0% |
| ACTGTCTTGCATTCAGCAGC+TGG | - | chr4.2:15049020-15049039 | MS.gene08264:CDS | 50.0% | |
| ATTGGTCCGGAAGAGCAAGA+GGG | + | chr4.2:15050778-15050797 | None:intergenic | 50.0% | |
| CTTAACATTCGCGACGCAGA+TGG | - | chr4.2:15050079-15050098 | MS.gene08264:intron | 50.0% | |
| CTTCCGGACCAATAGATGGT+GGG | - | chr4.2:15050785-15050804 | MS.gene08264:CDS | 50.0% | |
| TATTGGTCCGGAAGAGCAAG+AGG | + | chr4.2:15050779-15050798 | None:intergenic | 50.0% | |
| TCTTCCGGACCAATAGATGG+TGG | - | chr4.2:15050784-15050803 | MS.gene08264:CDS | 50.0% | |
| TGCTCTTCCGGACCAATAGA+TGG | - | chr4.2:15050781-15050800 | MS.gene08264:CDS | 50.0% | |
| TGCTGCTAGAGGAGGGAATT+GGG | - | chr4.2:15048926-15048945 | MS.gene08264:CDS | 50.0% | |
| TTCACAGCAGGCCTAATGCA+AGG | - | chr4.2:15050664-15050683 | MS.gene08264:CDS | 50.0% | |
| TTCCGGACCAATAGATGGTG+GGG | - | chr4.2:15050786-15050805 | MS.gene08264:CDS | 50.0% | |
| TTGCATTCAGCAGCTGGAAG+AGG | - | chr4.2:15049026-15049045 | MS.gene08264:CDS | 50.0% | |
| ! | CATGGTATTGGAGGTAGTCC+CGG | - | chr4.2:15050247-15050266 | MS.gene08264:intron | 50.0% |
| ! | GAATTGGATGAAGGTGGTGG+TGG | - | chr4.2:15048861-15048880 | MS.gene08264:CDS | 50.0% |
| ! | TGCTGCTTCTGCTGGTGATT+TGG | - | chr4.2:15048677-15048696 | MS.gene08264:CDS | 50.0% |
| !! | CTCATTCGTGGTGGATATGG+TGG | - | chr4.2:15048639-15048658 | MS.gene08264:CDS | 50.0% |
| !! | GTGGTGGTGGAGATTTCAAG+AGG | - | chr4.2:15048877-15048896 | MS.gene08264:CDS | 50.0% |
| !! | TTCGTGGTGGATATGGTGGA+TGG | - | chr4.2:15048643-15048662 | MS.gene08264:CDS | 50.0% |
| !!! | TTCTTTTGGAGCACAAGGGC+AGG | - | chr4.2:15050870-15050889 | MS.gene08264:CDS | 50.0% |
| ACCCCCACCATCTATTGGTC+CGG | + | chr4.2:15050791-15050810 | None:intergenic | 55.0% | |
| AGAGCACAGGAGACCAATGG+TGG | - | chr4.2:15048385-15048404 | MS.gene08264:CDS | 55.0% | |
| ATCCATGCTGCTGCTAGAGG+AGG | - | chr4.2:15048918-15048937 | MS.gene08264:CDS | 55.0% | |
| CTGCTGCTAGAGGAGGGAAT+TGG | - | chr4.2:15048925-15048944 | MS.gene08264:CDS | 55.0% | |
| GCTATCCATGCTGCTGCTAG+AGG | - | chr4.2:15048915-15048934 | MS.gene08264:CDS | 55.0% | |
| GTGTTAATTGGGCCGCGAGA+CGG | - | chr4.2:15050419-15050438 | MS.gene08264:CDS | 55.0% | |
| TCCATGCTGCTGCTAGAGGA+GGG | - | chr4.2:15048919-15048938 | MS.gene08264:CDS | 55.0% | |
| TGGGTACCCCCACCATCTAT+TGG | + | chr4.2:15050796-15050815 | None:intergenic | 55.0% | |
| ! | TCCGGACCAATAGATGGTGG+GGG | - | chr4.2:15050787-15050806 | MS.gene08264:CDS | 55.0% |
| !! | TTGGATGAAGGTGGTGGTGG+TGG | - | chr4.2:15048864-15048883 | MS.gene08264:CDS | 55.0% |
| AGCTGGAAGAGGCCAGGTTG+AGG | - | chr4.2:15049037-15049056 | MS.gene08264:CDS | 60.0% | |
| CCTGTGCTCTCCCAACGTAG+AGG | + | chr4.2:15048375-15048394 | None:intergenic | 60.0% | |
| GGACTGCCCTCTTGCTCTTC+CGG | - | chr4.2:15050769-15050788 | MS.gene08264:CDS | 60.0% | |
| TCCCTCCTCTAGCAGCAGCA+TGG | + | chr4.2:15048923-15048942 | None:intergenic | 60.0% | |
| TGGAGCACAAGGGCAGGCTT+TGG | - | chr4.2:15050876-15050895 | MS.gene08264:CDS | 60.0% | |
| TTCAGCAGCTGGAAGAGGCC+AGG | - | chr4.2:15049031-15049050 | MS.gene08264:CDS | 60.0% | |
| ! | CCTCTACGTTGGGAGAGCAC+AGG | - | chr4.2:15048372-15048391 | MS.gene08264:CDS | 60.0% |
| ! | GGGAGAGCACAGGAGACCAA+TGG | - | chr4.2:15048382-15048401 | MS.gene08264:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 15048354 | 15050963 | 15048354 | ID=MS.gene08264 |
| chr4.2 | mRNA | 15048354 | 15050963 | 15048354 | ID=MS.gene08264.t1;Parent=MS.gene08264 |
| chr4.2 | exon | 15050259 | 15050963 | 15050259 | ID=MS.gene08264.t1.exon1;Parent=MS.gene08264.t1 |
| chr4.2 | CDS | 15050259 | 15050963 | 15050259 | ID=cds.MS.gene08264.t1;Parent=MS.gene08264.t1 |
| chr4.2 | exon | 15048354 | 15049628 | 15048354 | ID=MS.gene08264.t1.exon2;Parent=MS.gene08264.t1 |
| chr4.2 | CDS | 15048354 | 15049628 | 15048354 | ID=cds.MS.gene08264.t1;Parent=MS.gene08264.t1 |
| Gene Sequence |
| Protein sequence |
