Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39685.t1 | RHN38771.1 | 62.8 | 341 | 14 | 1 | 1 | 228 | 36 | 376 | 2.00E-109 | 405.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39685.t1 | Q9LTH7 | 37.7 | 329 | 84 | 6 | 17 | 226 | 14 | 340 | 3.9e-53 | 209.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39685.t1 | G7LCL5 | 62.8 | 341 | 14 | 1 | 1 | 228 | 1 | 341 | 1.4e-109 | 405.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene39685 | 0.836772 | 7.69E-57 | -1.69E-46 |
| MS.gene049153 | MS.gene39685 | 0.829583 | 4.75E-55 | -1.69E-46 |
| MS.gene050426 | MS.gene39685 | -0.818928 | 1.52E-52 | -1.69E-46 |
| MS.gene050680 | MS.gene39685 | 0.809116 | 2.22E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene39685 | 0.801483 | 8.82E-49 | -1.69E-46 |
| MS.gene051373 | MS.gene39685 | 0.828125 | 1.07E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene39685 | 0.809881 | 1.52E-50 | -1.69E-46 |
| MS.gene051582 | MS.gene39685 | 0.802497 | 5.46E-49 | -1.69E-46 |
| MS.gene051588 | MS.gene39685 | 0.815256 | 1.01E-51 | -1.69E-46 |
| MS.gene051983 | MS.gene39685 | 0.84367 | 1.21E-58 | -1.69E-46 |
| MS.gene052011 | MS.gene39685 | -0.830451 | 2.91E-55 | -1.69E-46 |
| MS.gene052077 | MS.gene39685 | 0.811539 | 6.66E-51 | -1.69E-46 |
| MS.gene052135 | MS.gene39685 | 0.805805 | 1.12E-49 | -1.69E-46 |
| MS.gene052159 | MS.gene39685 | 0.808578 | 2.89E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene39685 | 0.804935 | 1.70E-49 | -1.69E-46 |
| MS.gene052353 | MS.gene39685 | 0.810644 | 1.04E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene39685 | 0.811281 | 7.57E-51 | -1.69E-46 |
| MS.gene053176 | MS.gene39685 | 0.812188 | 4.81E-51 | -1.69E-46 |
| MS.gene053494 | MS.gene39685 | 0.834038 | 3.78E-56 | -1.69E-46 |
| MS.gene053928 | MS.gene39685 | 0.813852 | 2.07E-51 | -1.69E-46 |
| MS.gene054102 | MS.gene39685 | 0.828413 | 9.12E-55 | -1.69E-46 |
| MS.gene054183 | MS.gene39685 | 0.873236 | 1.72E-67 | -1.69E-46 |
| MS.gene054349 | MS.gene39685 | 0.805972 | 1.03E-49 | -1.69E-46 |
| MS.gene054548 | MS.gene39685 | 0.801767 | 7.71E-49 | -1.69E-46 |
| MS.gene054556 | MS.gene39685 | 0.812992 | 3.21E-51 | -1.69E-46 |
| MS.gene054559 | MS.gene39685 | 0.803891 | 2.81E-49 | -1.69E-46 |
| MS.gene054719 | MS.gene39685 | 0.823394 | 1.42E-53 | -1.69E-46 |
| MS.gene054920 | MS.gene39685 | 0.8213 | 4.34E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene39685 | 0.804181 | 2.44E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene39685 | 0.803849 | 2.86E-49 | -1.69E-46 |
| MS.gene055367 | MS.gene39685 | 0.848352 | 6.47E-60 | -1.69E-46 |
| MS.gene055369 | MS.gene39685 | 0.832563 | 8.80E-56 | -1.69E-46 |
| MS.gene05553 | MS.gene39685 | 0.852864 | 3.49E-61 | -1.69E-46 |
| MS.gene055701 | MS.gene39685 | 0.838764 | 2.37E-57 | -1.69E-46 |
| MS.gene05595 | MS.gene39685 | 0.817845 | 2.67E-52 | -1.69E-46 |
| MS.gene056514 | MS.gene39685 | 0.804822 | 1.80E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene39685 | 0.801131 | 1.04E-48 | -1.69E-46 |
| MS.gene056723 | MS.gene39685 | 0.868719 | 5.30E-66 | -1.69E-46 |
| MS.gene056979 | MS.gene39685 | 0.832029 | 1.19E-55 | -1.69E-46 |
| MS.gene057156 | MS.gene39685 | -0.81029 | 1.24E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene39685 | 0.847149 | 1.39E-59 | -1.69E-46 |
| MS.gene057825 | MS.gene39685 | 0.808236 | 3.42E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene39685 | 0.857082 | 2.08E-62 | -1.69E-46 |
| MS.gene058710 | MS.gene39685 | 0.80195 | 7.07E-49 | -1.69E-46 |
| MS.gene058949 | MS.gene39685 | 0.809331 | 2.00E-50 | -1.69E-46 |
| MS.gene059247 | MS.gene39685 | 0.834209 | 3.42E-56 | -1.69E-46 |
| MS.gene059285 | MS.gene39685 | 0.815722 | 7.99E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene39685 | 0.86057 | 1.88E-63 | -1.69E-46 |
| MS.gene059868 | MS.gene39685 | 0.836931 | 7.00E-57 | -1.69E-46 |
| MS.gene059958 | MS.gene39685 | 0.843389 | 1.44E-58 | -1.69E-46 |
| MS.gene060247 | MS.gene39685 | 0.81214 | 4.93E-51 | -1.69E-46 |
| MS.gene061114 | MS.gene39685 | -0.843787 | 1.13E-58 | -1.69E-46 |
| MS.gene061159 | MS.gene39685 | 0.842833 | 2.03E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39685.t1 | MTR_8g009110 | 93.143 | 175 | 12 | 0 | 1 | 175 | 1 | 175 | 2.23e-119 | 344 |
| MS.gene39685.t1 | MTR_8g009110 | 96.296 | 54 | 2 | 0 | 175 | 228 | 288 | 341 | 2.32e-29 | 112 |
| MS.gene39685.t1 | MTR_8g009160 | 84.000 | 175 | 27 | 1 | 1 | 175 | 1 | 174 | 4.12e-105 | 308 |
| MS.gene39685.t1 | MTR_8g009160 | 83.333 | 54 | 9 | 0 | 175 | 228 | 287 | 340 | 1.54e-24 | 100 |
| MS.gene39685.t1 | MTR_8g009150 | 81.714 | 175 | 32 | 0 | 1 | 175 | 1 | 175 | 2.41e-104 | 305 |
| MS.gene39685.t1 | MTR_8g009150 | 81.481 | 54 | 10 | 0 | 175 | 228 | 268 | 321 | 4.66e-23 | 95.5 |
| MS.gene39685.t1 | MTR_8g028435 | 73.762 | 202 | 52 | 1 | 1 | 202 | 1 | 201 | 6.79e-104 | 305 |
| MS.gene39685.t1 | MTR_8g028435 | 90.741 | 54 | 5 | 0 | 175 | 228 | 287 | 340 | 1.99e-26 | 105 |
| MS.gene39685.t1 | MTR_8g009120 | 76.720 | 189 | 44 | 0 | 1 | 189 | 1 | 189 | 7.15e-104 | 304 |
| MS.gene39685.t1 | MTR_8g009120 | 82.143 | 56 | 10 | 0 | 173 | 228 | 274 | 329 | 8.75e-25 | 100 |
| MS.gene39685.t1 | MTR_8g009170 | 81.714 | 175 | 32 | 0 | 1 | 175 | 1 | 175 | 1.57e-103 | 301 |
| MS.gene39685.t1 | MTR_8g009170 | 81.714 | 175 | 32 | 0 | 1 | 175 | 1 | 175 | 7.38e-103 | 302 |
| MS.gene39685.t1 | MTR_8g009170 | 79.630 | 54 | 11 | 0 | 175 | 228 | 288 | 341 | 1.29e-23 | 97.4 |
| MS.gene39685.t1 | MTR_8g008930 | 77.473 | 182 | 39 | 2 | 1 | 181 | 1 | 181 | 1.77e-99 | 293 |
| MS.gene39685.t1 | MTR_8g008930 | 85.185 | 54 | 8 | 0 | 175 | 228 | 288 | 341 | 2.61e-24 | 99.4 |
| MS.gene39685.t1 | MTR_8g009090 | 78.857 | 175 | 36 | 1 | 1 | 175 | 1 | 174 | 2.19e-97 | 288 |
| MS.gene39685.t1 | MTR_8g009090 | 88.889 | 54 | 6 | 0 | 175 | 228 | 287 | 340 | 3.39e-26 | 104 |
| MS.gene39685.t1 | MTR_4g117880 | 69.231 | 182 | 54 | 2 | 1 | 181 | 1 | 181 | 1.25e-86 | 261 |
| MS.gene39685.t1 | MTR_4g117880 | 81.818 | 55 | 10 | 0 | 175 | 229 | 288 | 342 | 1.93e-23 | 97.1 |
| MS.gene39685.t1 | MTR_2g069090 | 61.170 | 188 | 67 | 4 | 5 | 189 | 11 | 195 | 4.75e-73 | 226 |
| MS.gene39685.t1 | MTR_2g069090 | 72.222 | 54 | 15 | 0 | 175 | 228 | 295 | 348 | 3.13e-21 | 90.9 |
| MS.gene39685.t1 | MTR_2g069210 | 65.244 | 164 | 52 | 3 | 15 | 175 | 16 | 177 | 1.86e-71 | 222 |
| MS.gene39685.t1 | MTR_2g069210 | 74.545 | 55 | 14 | 0 | 175 | 229 | 290 | 344 | 4.18e-22 | 93.2 |
| MS.gene39685.t1 | MTR_2g069190 | 59.043 | 188 | 71 | 4 | 5 | 189 | 11 | 195 | 3.70e-69 | 216 |
| MS.gene39685.t1 | MTR_2g069190 | 76.364 | 55 | 13 | 0 | 175 | 229 | 294 | 348 | 1.96e-23 | 97.1 |
| MS.gene39685.t1 | MTR_2g069300 | 58.989 | 178 | 68 | 3 | 15 | 189 | 6 | 181 | 4.52e-69 | 216 |
| MS.gene39685.t1 | MTR_2g069300 | 66.667 | 54 | 18 | 0 | 175 | 228 | 281 | 334 | 4.64e-18 | 82.0 |
| MS.gene39685.t1 | MTR_8g009080 | 52.406 | 187 | 83 | 5 | 6 | 189 | 38 | 221 | 4.46e-57 | 184 |
| MS.gene39685.t1 | MTR_8g009080 | 52.406 | 187 | 83 | 5 | 6 | 189 | 38 | 221 | 9.64e-57 | 184 |
| MS.gene39685.t1 | MTR_8g009080 | 52.406 | 187 | 83 | 5 | 6 | 189 | 38 | 221 | 1.91e-56 | 184 |
| MS.gene39685.t1 | MTR_8g009080 | 75.926 | 54 | 13 | 0 | 175 | 228 | 320 | 373 | 2.49e-21 | 91.7 |
| MS.gene39685.t1 | MTR_1g043760 | 50.282 | 177 | 83 | 4 | 15 | 189 | 7 | 180 | 8.61e-54 | 176 |
| MS.gene39685.t1 | MTR_1g043760 | 60.000 | 55 | 22 | 0 | 175 | 229 | 279 | 333 | 1.85e-14 | 71.6 |
| MS.gene39685.t1 | MTR_1g043770 | 51.462 | 171 | 76 | 5 | 19 | 188 | 11 | 175 | 1.79e-52 | 171 |
| MS.gene39685.t1 | MTR_1g043770 | 51.462 | 171 | 76 | 5 | 19 | 188 | 11 | 175 | 1.81e-52 | 173 |
| MS.gene39685.t1 | MTR_1g043770 | 62.264 | 53 | 20 | 0 | 175 | 227 | 278 | 330 | 6.04e-16 | 75.9 |
| MS.gene39685.t1 | MTR_1g043775 | 49.438 | 178 | 84 | 5 | 15 | 189 | 7 | 181 | 2.71e-51 | 169 |
| MS.gene39685.t1 | MTR_1g043775 | 49.438 | 178 | 84 | 5 | 15 | 189 | 7 | 181 | 3.98e-51 | 169 |
| MS.gene39685.t1 | MTR_1g043775 | 66.667 | 54 | 18 | 0 | 176 | 229 | 281 | 334 | 2.42e-18 | 82.8 |
| MS.gene39685.t1 | MTR_8g041600 | 48.045 | 179 | 84 | 4 | 17 | 189 | 22 | 197 | 1.36e-50 | 167 |
| MS.gene39685.t1 | MTR_1g044105 | 49.133 | 173 | 77 | 5 | 15 | 179 | 7 | 176 | 2.22e-50 | 162 |
| MS.gene39685.t1 | MTR_8g041600 | 48.045 | 179 | 84 | 4 | 17 | 189 | 22 | 197 | 8.60e-50 | 167 |
| MS.gene39685.t1 | MTR_8g041600 | 61.818 | 55 | 20 | 1 | 175 | 228 | 296 | 350 | 5.07e-14 | 70.5 |
| MS.gene39685.t1 | MTR_8g041620 | 47.486 | 179 | 85 | 4 | 17 | 189 | 22 | 197 | 8.07e-49 | 164 |
| MS.gene39685.t1 | MTR_8g041620 | 58.182 | 55 | 22 | 1 | 175 | 228 | 296 | 350 | 1.02e-13 | 69.7 |
| MS.gene39685.t1 | MTR_1g043810 | 46.629 | 178 | 89 | 5 | 15 | 189 | 7 | 181 | 3.59e-47 | 159 |
| MS.gene39685.t1 | MTR_1g043810 | 46.629 | 178 | 89 | 5 | 15 | 189 | 7 | 181 | 5.32e-47 | 159 |
| MS.gene39685.t1 | MTR_1g043810 | 66.667 | 54 | 18 | 0 | 176 | 229 | 281 | 334 | 2.19e-18 | 82.8 |
| MS.gene39685.t1 | MTR_1g093140 | 41.579 | 190 | 96 | 5 | 15 | 192 | 17 | 203 | 2.76e-45 | 155 |
| MS.gene39685.t1 | MTR_1g093140 | 53.571 | 56 | 24 | 1 | 176 | 229 | 300 | 355 | 2.23e-11 | 62.8 |
| MS.gene39685.t1 | MTR_7g056347 | 43.575 | 179 | 97 | 4 | 16 | 192 | 21 | 197 | 6.44e-45 | 154 |
| MS.gene39685.t1 | MTR_7g056347 | 51.724 | 58 | 25 | 1 | 175 | 229 | 293 | 350 | 4.45e-12 | 65.1 |
| MS.gene39685.t1 | MTR_1g093120 | 42.308 | 182 | 93 | 5 | 19 | 192 | 20 | 197 | 6.87e-44 | 151 |
| MS.gene39685.t1 | MTR_1g093120 | 56.604 | 53 | 23 | 0 | 176 | 228 | 294 | 346 | 1.09e-13 | 69.7 |
| MS.gene39685.t1 | MTR_8g063070 | 40.102 | 197 | 111 | 5 | 1 | 192 | 3 | 197 | 2.14e-43 | 150 |
| MS.gene39685.t1 | MTR_8g063070 | 61.404 | 57 | 19 | 1 | 176 | 229 | 294 | 350 | 9.50e-12 | 63.9 |
| MS.gene39685.t1 | MTR_7g029655 | 41.209 | 182 | 95 | 3 | 15 | 189 | 15 | 191 | 5.04e-43 | 149 |
| MS.gene39685.t1 | MTR_7g029655 | 60.345 | 58 | 20 | 2 | 175 | 229 | 290 | 347 | 1.34e-13 | 69.3 |
| MS.gene39685.t1 | MTR_8g006930 | 42.045 | 176 | 98 | 3 | 19 | 192 | 24 | 197 | 8.12e-43 | 148 |
| MS.gene39685.t1 | MTR_8g006930 | 56.140 | 57 | 22 | 1 | 175 | 228 | 293 | 349 | 6.91e-13 | 67.4 |
| MS.gene39685.t1 | MTR_4g119410 | 40.741 | 189 | 108 | 4 | 19 | 205 | 24 | 210 | 1.80e-42 | 147 |
| MS.gene39685.t1 | MTR_4g119410 | 56.140 | 57 | 22 | 1 | 176 | 229 | 294 | 350 | 1.19e-12 | 66.6 |
| MS.gene39685.t1 | MTR_8g062600 | 43.646 | 181 | 96 | 4 | 16 | 193 | 21 | 198 | 2.39e-42 | 147 |
| MS.gene39685.t1 | MTR_8g062600 | 59.649 | 57 | 20 | 1 | 176 | 229 | 294 | 350 | 6.33e-14 | 70.5 |
| MS.gene39685.t1 | MTR_7g078010 | 43.030 | 165 | 90 | 3 | 19 | 181 | 24 | 186 | 6.66e-42 | 144 |
| MS.gene39685.t1 | MTR_4g099380 | 43.902 | 164 | 79 | 4 | 17 | 175 | 127 | 282 | 1.81e-41 | 142 |
| MS.gene39685.t1 | MTR_7g078010 | 41.618 | 173 | 97 | 3 | 19 | 189 | 24 | 194 | 4.44e-41 | 144 |
| MS.gene39685.t1 | MTR_7g078010 | 52.632 | 57 | 24 | 1 | 175 | 228 | 293 | 349 | 7.29e-12 | 64.3 |
| MS.gene39685.t1 | MTR_4g024660 | 42.045 | 176 | 98 | 4 | 19 | 192 | 24 | 197 | 4.21e-40 | 141 |
| MS.gene39685.t1 | MTR_4g024660 | 56.140 | 57 | 22 | 1 | 176 | 229 | 294 | 350 | 1.12e-12 | 66.6 |
| MS.gene39685.t1 | MTR_1g093110 | 40.217 | 184 | 90 | 5 | 19 | 189 | 21 | 197 | 4.77e-40 | 141 |
| MS.gene39685.t1 | MTR_1g093110 | 55.556 | 54 | 23 | 1 | 176 | 228 | 297 | 350 | 2.41e-12 | 65.9 |
| MS.gene39685.t1 | MTR_0032s0040 | 41.053 | 190 | 95 | 4 | 15 | 192 | 15 | 199 | 4.79e-39 | 139 |
| MS.gene39685.t1 | MTR_0032s0040 | 60.000 | 55 | 21 | 1 | 176 | 229 | 296 | 350 | 6.31e-14 | 70.5 |
| MS.gene39685.t1 | MTR_2g069020 | 41.104 | 163 | 90 | 3 | 16 | 174 | 19 | 179 | 3.81e-38 | 136 |
| MS.gene39685.t1 | MTR_2g068950 | 41.111 | 180 | 95 | 5 | 1 | 174 | 1 | 175 | 5.34e-38 | 135 |
| MS.gene39685.t1 | MTR_2g068950 | 59.322 | 59 | 20 | 1 | 175 | 229 | 289 | 347 | 9.25e-13 | 67.0 |
| MS.gene39685.t1 | MTR_2g069020 | 41.104 | 163 | 90 | 3 | 16 | 174 | 19 | 179 | 6.55e-38 | 136 |
| MS.gene39685.t1 | MTR_2g069010 | 40.491 | 163 | 91 | 3 | 16 | 174 | 21 | 181 | 1.45e-37 | 135 |
| MS.gene39685.t1 | MTR_2g069010 | 59.322 | 59 | 20 | 1 | 175 | 229 | 295 | 353 | 3.21e-13 | 68.2 |
| MS.gene39685.t1 | MTR_2g068960 | 42.222 | 180 | 93 | 6 | 1 | 174 | 1 | 175 | 1.61e-37 | 134 |
| MS.gene39685.t1 | MTR_2g068960 | 55.932 | 59 | 22 | 1 | 175 | 229 | 289 | 347 | 1.95e-12 | 65.9 |
| MS.gene39685.t1 | MTR_7g056393 | 42.138 | 159 | 88 | 4 | 19 | 175 | 24 | 180 | 1.63e-37 | 134 |
| MS.gene39685.t1 | MTR_7g056393 | 56.897 | 58 | 22 | 1 | 175 | 229 | 293 | 350 | 1.23e-13 | 69.3 |
| MS.gene39685.t1 | MTR_7g105070 | 40.606 | 165 | 92 | 3 | 19 | 180 | 15 | 176 | 9.05e-37 | 132 |
| MS.gene39685.t1 | MTR_2g069070 | 41.860 | 172 | 81 | 4 | 5 | 176 | 11 | 163 | 5.14e-36 | 126 |
| MS.gene39685.t1 | MTR_7g056370 | 36.416 | 173 | 106 | 4 | 22 | 192 | 6 | 176 | 1.57e-35 | 125 |
| MS.gene39685.t1 | MTR_2g069060 | 43.373 | 166 | 76 | 4 | 16 | 181 | 21 | 168 | 1.85e-35 | 129 |
| MS.gene39685.t1 | MTR_2g069060 | 60.000 | 55 | 20 | 1 | 175 | 229 | 275 | 327 | 4.57e-13 | 67.8 |
| MS.gene39685.t1 | MTR_1g070185 | 40.764 | 157 | 92 | 1 | 19 | 175 | 25 | 180 | 9.04e-34 | 124 |
| MS.gene39685.t1 | MTR_1g070185 | 60.377 | 53 | 18 | 1 | 175 | 227 | 293 | 342 | 1.37e-11 | 63.5 |
| MS.gene39685.t1 | MTR_8g469400 | 41.104 | 163 | 78 | 5 | 4 | 161 | 6 | 155 | 1.36e-31 | 119 |
| MS.gene39685.t1 | MTR_8g469400 | 57.895 | 57 | 21 | 1 | 176 | 229 | 281 | 337 | 1.76e-13 | 68.9 |
| MS.gene39685.t1 | MTR_2g069060 | 48.361 | 122 | 61 | 2 | 60 | 181 | 27 | 146 | 1.38e-31 | 116 |
| MS.gene39685.t1 | MTR_1g032220 | 36.747 | 166 | 96 | 3 | 19 | 180 | 28 | 188 | 9.24e-30 | 114 |
| MS.gene39685.t1 | MTR_1g032250 | 34.807 | 181 | 108 | 4 | 4 | 180 | 14 | 188 | 3.00e-29 | 112 |
| MS.gene39685.t1 | MTR_1g032140 | 37.888 | 161 | 91 | 3 | 19 | 175 | 21 | 176 | 6.18e-29 | 112 |
| MS.gene39685.t1 | MTR_8g009180 | 85.185 | 54 | 8 | 0 | 175 | 228 | 217 | 270 | 5.99e-26 | 102 |
| MS.gene39685.t1 | MTR_8g009180 | 78.571 | 42 | 8 | 1 | 132 | 173 | 46 | 86 | 4.34e-15 | 73.2 |
| MS.gene39685.t1 | MTR_1g043840 | 59.459 | 74 | 29 | 1 | 71 | 144 | 256 | 328 | 3.75e-24 | 98.6 |
| MS.gene39685.t1 | MTR_8g008960 | 74.000 | 50 | 13 | 0 | 179 | 228 | 29 | 78 | 2.97e-21 | 85.5 |
| MS.gene39685.t1 | MTR_7g068650 | 30.120 | 166 | 108 | 4 | 14 | 172 | 1 | 165 | 7.09e-21 | 89.7 |
| MS.gene39685.t1 | MTR_7g056353 | 34.756 | 164 | 75 | 6 | 20 | 181 | 27 | 160 | 2.84e-20 | 89.0 |
| MS.gene39685.t1 | MTR_7g056353 | 57.143 | 56 | 21 | 1 | 176 | 228 | 268 | 323 | 7.54e-11 | 61.6 |
| MS.gene39685.t1 | MTR_2g068850 | 32.828 | 198 | 112 | 9 | 27 | 208 | 21 | 213 | 6.82e-19 | 82.0 |
| MS.gene39685.t1 | MTR_2g068840 | 34.731 | 167 | 97 | 7 | 27 | 188 | 21 | 180 | 2.13e-18 | 83.2 |
| MS.gene39685.t1 | MTR_2g068800 | 31.707 | 164 | 87 | 5 | 27 | 188 | 21 | 161 | 6.23e-17 | 78.2 |
| MS.gene39685.t1 | MTR_4g015790 | 27.273 | 209 | 112 | 6 | 28 | 217 | 14 | 201 | 8.05e-16 | 75.9 |
| MS.gene39685.t1 | MTR_4g099390 | 58.929 | 56 | 21 | 1 | 176 | 229 | 6 | 61 | 1.68e-14 | 67.0 |
| MS.gene39685.t1 | MTR_3g070860 | 25.828 | 151 | 108 | 2 | 14 | 161 | 1 | 150 | 2.13e-14 | 71.6 |
| MS.gene39685.t1 | MTR_3g092890 | 33.028 | 109 | 67 | 1 | 60 | 168 | 38 | 140 | 3.96e-14 | 70.9 |
| MS.gene39685.t1 | MTR_5g055690 | 31.915 | 141 | 88 | 4 | 27 | 164 | 12 | 147 | 5.49e-14 | 69.7 |
| MS.gene39685.t1 | MTR_5g055690 | 30.667 | 150 | 96 | 4 | 27 | 173 | 12 | 156 | 6.54e-14 | 70.1 |
| MS.gene39685.t1 | MTR_5g048550 | 29.530 | 149 | 98 | 3 | 27 | 173 | 12 | 155 | 1.44e-13 | 69.3 |
| MS.gene39685.t1 | MTR_1g032230 | 32.836 | 134 | 63 | 2 | 19 | 148 | 22 | 132 | 1.60e-13 | 68.6 |
| MS.gene39685.t1 | MTR_5g082750 | 31.092 | 119 | 78 | 2 | 60 | 175 | 49 | 166 | 1.78e-13 | 68.9 |
| MS.gene39685.t1 | MTR_3g045230 | 29.101 | 189 | 110 | 8 | 7 | 186 | 2 | 175 | 2.89e-13 | 68.2 |
| MS.gene39685.t1 | MTR_1g062110 | 28.272 | 191 | 123 | 5 | 27 | 207 | 26 | 212 | 3.10e-13 | 68.6 |
| MS.gene39685.t1 | MTR_1g062110 | 28.272 | 191 | 123 | 5 | 27 | 207 | 26 | 212 | 3.19e-13 | 68.2 |
| MS.gene39685.t1 | MTR_5g048850 | 29.932 | 147 | 96 | 3 | 27 | 171 | 12 | 153 | 3.21e-13 | 67.8 |
| MS.gene39685.t1 | MTR_5g048850 | 30.137 | 146 | 95 | 3 | 28 | 171 | 13 | 153 | 3.24e-13 | 68.2 |
| MS.gene39685.t1 | MTR_3g091350 | 30.827 | 133 | 84 | 3 | 35 | 161 | 31 | 161 | 3.25e-13 | 68.2 |
| MS.gene39685.t1 | MTR_0009s0050 | 29.932 | 147 | 96 | 3 | 27 | 171 | 12 | 153 | 5.93e-13 | 67.4 |
| MS.gene39685.t1 | MTR_0009s0050 | 29.932 | 147 | 96 | 3 | 27 | 171 | 12 | 153 | 5.99e-13 | 67.4 |
| MS.gene39685.t1 | MTR_1g033810 | 31.250 | 112 | 74 | 2 | 60 | 171 | 47 | 155 | 1.03e-12 | 66.6 |
| MS.gene39685.t1 | MTR_5g048470 | 29.333 | 150 | 99 | 3 | 27 | 173 | 17 | 162 | 1.09e-12 | 66.6 |
| MS.gene39685.t1 | MTR_7g062570 | 29.252 | 147 | 96 | 4 | 28 | 171 | 20 | 161 | 1.36e-12 | 66.2 |
| MS.gene39685.t1 | MTR_7g062600 | 29.927 | 137 | 88 | 4 | 28 | 161 | 16 | 147 | 1.41e-12 | 66.2 |
| MS.gene39685.t1 | MTR_3g043900 | 29.348 | 184 | 105 | 9 | 11 | 186 | 8 | 174 | 3.95e-12 | 65.1 |
| MS.gene39685.t1 | MTR_7g063730 | 31.655 | 139 | 83 | 4 | 38 | 171 | 39 | 170 | 4.25e-12 | 65.1 |
| MS.gene39685.t1 | MTR_5g048570 | 29.452 | 146 | 96 | 3 | 27 | 171 | 12 | 151 | 5.00e-12 | 64.7 |
| MS.gene39685.t1 | MTR_1g034140 | 41.772 | 79 | 39 | 2 | 60 | 138 | 27 | 98 | 9.03e-12 | 63.9 |
| MS.gene39685.t1 | MTR_5g055800 | 29.530 | 149 | 96 | 5 | 28 | 173 | 13 | 155 | 9.05e-12 | 63.9 |
| MS.gene39685.t1 | MTR_4g087120 | 35.135 | 111 | 65 | 3 | 60 | 167 | 26 | 132 | 9.25e-12 | 63.9 |
| MS.gene39685.t1 | MTR_5g065010 | 27.536 | 138 | 97 | 2 | 27 | 161 | 3 | 140 | 1.01e-11 | 63.9 |
| MS.gene39685.t1 | MTR_7g081710 | 23.841 | 151 | 108 | 3 | 15 | 161 | 1 | 148 | 1.04e-11 | 63.9 |
| MS.gene39685.t1 | MTR_7g062580 | 28.378 | 148 | 98 | 4 | 27 | 171 | 19 | 161 | 1.15e-11 | 63.5 |
| MS.gene39685.t1 | MTR_7g045650 | 29.932 | 147 | 95 | 4 | 28 | 171 | 25 | 166 | 1.25e-11 | 63.5 |
| MS.gene39685.t1 | MTR_8g064200 | 28.667 | 150 | 99 | 4 | 27 | 173 | 22 | 166 | 1.97e-11 | 63.2 |
| MS.gene39685.t1 | MTR_8g064200 | 28.667 | 150 | 99 | 4 | 27 | 173 | 17 | 161 | 2.11e-11 | 62.8 |
| MS.gene39685.t1 | MTR_0009s0410 | 27.517 | 149 | 99 | 4 | 28 | 173 | 12 | 154 | 2.51e-11 | 60.5 |
| MS.gene39685.t1 | MTR_7g062550 | 27.041 | 196 | 131 | 7 | 27 | 216 | 24 | 213 | 2.83e-11 | 62.8 |
| MS.gene39685.t1 | MTR_5g055900 | 29.932 | 147 | 96 | 4 | 27 | 171 | 12 | 153 | 3.18e-11 | 62.4 |
| MS.gene39685.t1 | MTR_4g087130 | 44.118 | 68 | 35 | 1 | 60 | 124 | 26 | 93 | 3.70e-11 | 62.4 |
| MS.gene39685.t1 | MTR_8g024120 | 31.373 | 102 | 67 | 1 | 60 | 161 | 42 | 140 | 5.63e-11 | 61.6 |
| MS.gene39685.t1 | MTR_7g102720 | 29.508 | 122 | 79 | 3 | 60 | 181 | 37 | 151 | 5.91e-11 | 61.6 |
| MS.gene39685.t1 | MTR_5g055820 | 27.517 | 149 | 101 | 4 | 27 | 173 | 12 | 155 | 7.06e-11 | 61.2 |
| MS.gene39685.t1 | MTR_5g011250 | 28.916 | 166 | 106 | 4 | 60 | 216 | 47 | 209 | 8.47e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39685.t1 | AT5G59540 | 54.545 | 165 | 67 | 5 | 17 | 175 | 14 | 176 | 4.80e-55 | 177 |
| MS.gene39685.t1 | AT5G59540 | 54.545 | 165 | 67 | 5 | 17 | 175 | 14 | 176 | 2.31e-54 | 178 |
| MS.gene39685.t1 | AT5G59540 | 62.963 | 54 | 20 | 0 | 175 | 228 | 289 | 342 | 4.25e-17 | 79.3 |
| MS.gene39685.t1 | AT5G43440 | 48.352 | 182 | 84 | 4 | 15 | 189 | 11 | 189 | 2.10e-53 | 174 |
| MS.gene39685.t1 | AT5G43440 | 48.352 | 182 | 84 | 4 | 15 | 189 | 11 | 189 | 1.93e-52 | 173 |
| MS.gene39685.t1 | AT5G43440 | 60.000 | 55 | 22 | 0 | 175 | 229 | 288 | 342 | 2.79e-15 | 74.3 |
| MS.gene39685.t1 | AT1G06640 | 49.425 | 174 | 77 | 4 | 16 | 181 | 14 | 184 | 1.55e-51 | 169 |
| MS.gene39685.t1 | AT1G06640 | 49.425 | 174 | 77 | 4 | 16 | 181 | 14 | 184 | 2.53e-51 | 169 |
| MS.gene39685.t1 | AT1G06640 | 49.425 | 174 | 77 | 4 | 16 | 181 | 14 | 184 | 8.33e-51 | 169 |
| MS.gene39685.t1 | AT1G06640 | 58.182 | 55 | 22 | 1 | 175 | 228 | 291 | 345 | 3.60e-14 | 71.2 |
| MS.gene39685.t1 | AT1G06620 | 46.552 | 174 | 88 | 3 | 19 | 189 | 18 | 189 | 1.70e-50 | 166 |
| MS.gene39685.t1 | AT1G04350 | 44.845 | 194 | 97 | 4 | 16 | 204 | 10 | 198 | 2.28e-50 | 168 |
| MS.gene39685.t1 | AT1G04350 | 69.388 | 49 | 14 | 1 | 178 | 225 | 285 | 333 | 1.15e-13 | 69.7 |
| MS.gene39685.t1 | AT1G06650 | 45.556 | 180 | 91 | 3 | 16 | 189 | 14 | 192 | 1.64e-49 | 164 |
| MS.gene39685.t1 | AT1G06620 | 46.552 | 174 | 88 | 3 | 19 | 189 | 18 | 189 | 1.72e-49 | 166 |
| MS.gene39685.t1 | AT1G06620 | 61.818 | 55 | 21 | 0 | 175 | 229 | 288 | 342 | 1.76e-17 | 80.5 |
| MS.gene39685.t1 | AT1G06650 | 45.556 | 180 | 91 | 3 | 16 | 189 | 14 | 192 | 5.14e-49 | 164 |
| MS.gene39685.t1 | AT1G06650 | 61.818 | 55 | 20 | 1 | 175 | 228 | 291 | 345 | 9.19e-17 | 78.6 |
| MS.gene39685.t1 | AT5G43450 | 45.304 | 181 | 88 | 4 | 15 | 189 | 11 | 186 | 2.23e-48 | 160 |
| MS.gene39685.t1 | AT5G43450 | 45.304 | 181 | 88 | 4 | 15 | 189 | 11 | 186 | 1.20e-47 | 160 |
| MS.gene39685.t1 | AT5G43450 | 54.545 | 55 | 25 | 0 | 175 | 229 | 285 | 339 | 3.50e-13 | 68.2 |
| MS.gene39685.t1 | AT5G59530 | 50.000 | 172 | 75 | 7 | 17 | 181 | 13 | 180 | 1.24e-47 | 160 |
| MS.gene39685.t1 | AT5G59530 | 65.455 | 55 | 19 | 0 | 175 | 229 | 287 | 341 | 8.55e-18 | 81.3 |
| MS.gene39685.t1 | AT1G06645 | 45.556 | 180 | 90 | 4 | 4 | 176 | 16 | 194 | 9.13e-47 | 159 |
| MS.gene39685.t1 | AT1G06645 | 56.364 | 55 | 23 | 1 | 175 | 228 | 301 | 355 | 2.13e-13 | 68.9 |
| MS.gene39685.t1 | AT1G03410 | 49.091 | 165 | 76 | 4 | 16 | 174 | 8 | 170 | 2.93e-46 | 157 |
| MS.gene39685.t1 | AT1G03410 | 53.571 | 56 | 25 | 1 | 175 | 229 | 284 | 339 | 8.51e-12 | 64.3 |
| MS.gene39685.t1 | AT1G03410 | 49.091 | 165 | 76 | 4 | 16 | 174 | 45 | 207 | 7.56e-46 | 157 |
| MS.gene39685.t1 | AT1G03410 | 53.571 | 56 | 25 | 1 | 175 | 229 | 321 | 376 | 1.32e-11 | 63.5 |
| MS.gene39685.t1 | AT2G30840 | 41.209 | 182 | 101 | 3 | 16 | 192 | 9 | 189 | 4.02e-45 | 153 |
| MS.gene39685.t1 | AT2G30830 | 42.857 | 175 | 98 | 2 | 19 | 192 | 12 | 185 | 4.05e-45 | 154 |
| MS.gene39685.t1 | AT2G30840 | 41.209 | 182 | 101 | 3 | 16 | 192 | 9 | 189 | 1.33e-44 | 152 |
| MS.gene39685.t1 | AT2G30840 | 59.649 | 57 | 21 | 2 | 173 | 228 | 277 | 332 | 3.08e-11 | 62.4 |
| MS.gene39685.t1 | AT2G30840 | 41.209 | 182 | 101 | 3 | 16 | 192 | 9 | 189 | 1.64e-44 | 152 |
| MS.gene39685.t1 | AT2G30840 | 61.818 | 55 | 19 | 2 | 175 | 228 | 285 | 338 | 4.48e-11 | 62.0 |
| MS.gene39685.t1 | AT2G25450 | 45.342 | 161 | 84 | 3 | 16 | 174 | 9 | 167 | 3.48e-44 | 152 |
| MS.gene39685.t1 | AT2G25450 | 64.286 | 56 | 18 | 2 | 175 | 228 | 281 | 336 | 1.80e-13 | 68.9 |
| MS.gene39685.t1 | AT3G61400 | 39.303 | 201 | 114 | 3 | 15 | 208 | 12 | 211 | 2.54e-42 | 145 |
| MS.gene39685.t1 | AT3G61400 | 39.303 | 201 | 114 | 3 | 15 | 208 | 12 | 211 | 1.32e-41 | 145 |
| MS.gene39685.t1 | AT3G61400 | 66.071 | 56 | 18 | 1 | 175 | 229 | 293 | 348 | 2.30e-17 | 80.1 |
| MS.gene39685.t1 | AT1G04380 | 42.236 | 161 | 74 | 4 | 16 | 175 | 13 | 155 | 8.95e-39 | 135 |
| MS.gene39685.t1 | AT1G04380 | 42.236 | 161 | 74 | 4 | 16 | 175 | 13 | 155 | 3.83e-38 | 135 |
| MS.gene39685.t1 | AT1G04380 | 65.385 | 52 | 18 | 0 | 175 | 226 | 268 | 319 | 1.34e-17 | 80.5 |
| MS.gene39685.t1 | AT1G03400 | 39.779 | 181 | 95 | 3 | 16 | 192 | 8 | 178 | 2.32e-37 | 134 |
| MS.gene39685.t1 | AT1G03400 | 53.571 | 56 | 25 | 1 | 175 | 229 | 274 | 329 | 2.51e-11 | 62.8 |
| MS.gene39685.t1 | AT1G03400 | 39.779 | 181 | 95 | 3 | 16 | 192 | 8 | 178 | 6.72e-37 | 133 |
| MS.gene39685.t1 | AT1G03400 | 53.571 | 56 | 25 | 1 | 175 | 229 | 302 | 357 | 3.29e-11 | 62.4 |
| MS.gene39685.t1 | AT3G13610 | 31.481 | 162 | 94 | 7 | 27 | 181 | 26 | 177 | 6.28e-17 | 79.0 |
| MS.gene39685.t1 | AT3G12900 | 32.903 | 155 | 101 | 3 | 27 | 180 | 21 | 173 | 7.74e-17 | 78.6 |
| MS.gene39685.t1 | AT1G55290 | 29.375 | 160 | 101 | 4 | 27 | 181 | 25 | 177 | 9.96e-16 | 75.5 |
| MS.gene39685.t1 | AT2G38240 | 27.742 | 155 | 102 | 4 | 21 | 171 | 5 | 153 | 1.31e-14 | 72.4 |
| MS.gene39685.t1 | AT5G05600 | 26.712 | 146 | 101 | 3 | 20 | 161 | 19 | 162 | 3.70e-14 | 70.5 |
| MS.gene39685.t1 | AT5G05600 | 26.712 | 146 | 101 | 3 | 20 | 161 | 19 | 162 | 4.75e-14 | 70.9 |
| MS.gene39685.t1 | AT2G36690 | 32.450 | 151 | 88 | 6 | 25 | 165 | 18 | 164 | 2.49e-13 | 68.6 |
| MS.gene39685.t1 | AT2G36690 | 32.450 | 151 | 88 | 6 | 25 | 165 | 18 | 164 | 2.49e-13 | 68.6 |
| MS.gene39685.t1 | AT4G10500 | 29.412 | 102 | 69 | 1 | 60 | 161 | 44 | 142 | 6.89e-13 | 67.4 |
| MS.gene39685.t1 | AT3G11180 | 25.397 | 189 | 122 | 5 | 28 | 204 | 56 | 237 | 2.11e-12 | 66.2 |
| MS.gene39685.t1 | AT3G11180 | 27.273 | 143 | 88 | 4 | 28 | 161 | 56 | 191 | 2.42e-12 | 65.9 |
| MS.gene39685.t1 | AT1G17020 | 34.513 | 113 | 69 | 3 | 60 | 171 | 53 | 161 | 2.47e-12 | 65.9 |
| MS.gene39685.t1 | AT3G55970 | 25.294 | 170 | 117 | 4 | 15 | 175 | 1 | 169 | 4.26e-12 | 64.7 |
| MS.gene39685.t1 | AT3G55970 | 25.294 | 170 | 117 | 4 | 15 | 175 | 1 | 169 | 4.75e-12 | 65.1 |
| MS.gene39685.t1 | AT4G10490 | 26.471 | 102 | 72 | 1 | 60 | 161 | 42 | 140 | 1.75e-11 | 63.2 |
| MS.gene39685.t1 | AT3G21420 | 30.921 | 152 | 94 | 3 | 28 | 171 | 17 | 165 | 2.30e-11 | 62.8 |
| MS.gene39685.t1 | AT4G25300 | 29.139 | 151 | 95 | 4 | 54 | 196 | 46 | 192 | 2.47e-11 | 62.8 |
| MS.gene39685.t1 | AT2G44800 | 25.517 | 145 | 102 | 2 | 21 | 161 | 9 | 151 | 2.60e-11 | 62.8 |
| MS.gene39685.t1 | AT4G22880 | 28.767 | 146 | 92 | 4 | 28 | 163 | 7 | 150 | 3.32e-11 | 62.4 |
| MS.gene39685.t1 | AT4G22880 | 28.767 | 146 | 92 | 4 | 28 | 163 | 7 | 150 | 3.32e-11 | 62.4 |
| MS.gene39685.t1 | AT4G22880 | 28.767 | 146 | 92 | 4 | 28 | 163 | 7 | 150 | 3.32e-11 | 62.4 |
| MS.gene39685.t1 | AT3G19010 | 33.333 | 108 | 67 | 3 | 55 | 162 | 23 | 125 | 4.04e-11 | 62.0 |
| MS.gene39685.t1 | AT3G19010 | 33.333 | 108 | 67 | 3 | 55 | 162 | 23 | 125 | 4.57e-11 | 62.0 |
| MS.gene39685.t1 | AT3G19010 | 33.333 | 108 | 67 | 3 | 55 | 162 | 23 | 125 | 4.57e-11 | 62.0 |
| MS.gene39685.t1 | AT5G24530 | 28.866 | 97 | 66 | 1 | 65 | 161 | 40 | 133 | 6.76e-11 | 61.6 |
| MS.gene39685.t1 | AT3G19010 | 33.333 | 108 | 67 | 3 | 55 | 162 | 23 | 125 | 6.94e-11 | 61.2 |
Find 54 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAACTGGTTTCTCTATATT+TGG | 0.074694 | 8.3:+79958999 | None:intergenic |
| CTTTATTACCAATATCTTTA+AGG | 0.108231 | 8.3:+79961678 | None:intergenic |
| AACTCCTCAAGAACACTTAA+AGG | 0.202429 | 8.3:+79961569 | None:intergenic |
| TCTGATAATAGTTCCTTTAT+AGG | 0.245922 | 8.3:+79959033 | None:intergenic |
| GCTTCTTCTGCACAGGTATT+AGG | 0.261431 | 8.3:-79959077 | MS.gene39685:CDS |
| AAACTGGTTTCTCTATATTT+GGG | 0.272574 | 8.3:+79959000 | None:intergenic |
| GAAACAAAAGCTGGTGTAAA+AGG | 0.285364 | 8.3:-79961803 | MS.gene39685:CDS |
| TCTTGTGGTTTGAGAGTATC+AGG | 0.310758 | 8.3:+79961386 | None:intergenic |
| GTCATAGACCTTAAAGATAT+TGG | 0.321862 | 8.3:-79961686 | MS.gene39685:CDS |
| AAGCATGCCACAGATATTCT+TGG | 0.375754 | 8.3:+79959096 | None:intergenic |
| AAAGCTCTATGGACCTATAA+AGG | 0.376551 | 8.3:-79959046 | MS.gene39685:CDS |
| AGGTCATCCTCAAAGCTCTA+TGG | 0.382695 | 8.3:-79959057 | MS.gene39685:CDS |
| GGTTGATGATGGAATAATTC+AGG | 0.384299 | 8.3:+79961752 | None:intergenic |
| ACTCCTCAAGAACACTTAAA+GGG | 0.388477 | 8.3:+79961570 | None:intergenic |
| CATATTTGTCAGGTTGATGA+TGG | 0.396433 | 8.3:+79961741 | None:intergenic |
| TTGGCTTTCTCATATTTGTC+AGG | 0.399031 | 8.3:+79961731 | None:intergenic |
| TCAAGGAAGCATGTGAAACT+TGG | 0.407695 | 8.3:-79961622 | MS.gene39685:CDS |
| AGTTGAAAGATGGTGTTAAG+AGG | 0.417221 | 8.3:-79961550 | MS.gene39685:CDS |
| ATAGATCACCAGCACTCAAT+TGG | 0.425302 | 8.3:-79961439 | MS.gene39685:CDS |
| AATAACATGGCTCATGTTGT+TGG | 0.430352 | 8.3:+79961712 | None:intergenic |
| TAAGCTACGTAATCAGAAAC+TGG | 0.434620 | 8.3:+79958984 | None:intergenic |
| ACAATCCCTTCATGAATACT+TGG | 0.466300 | 8.3:+79961653 | None:intergenic |
| TATAGGTCCATAGAGCTTTG+AGG | 0.468817 | 8.3:+79959050 | None:intergenic |
| GTTGATTCAATATAGAATCA+AGG | 0.486469 | 8.3:+79961840 | None:intergenic |
| CAAGGAAGCATGTGAAACTT+GGG | 0.488613 | 8.3:-79961621 | MS.gene39685:CDS |
| AAGAGTTTCCTGTGGTATGC+AGG | 0.491788 | 8.3:-79961367 | MS.gene39685:intron |
| TTCAATATAGAATCAAGGTT+AGG | 0.506965 | 8.3:+79961845 | None:intergenic |
| GTTAGGCTTGGTTGTACCTG+TGG | 0.514402 | 8.3:+79961862 | None:intergenic |
| TATAGAATCAAGGTTAGGCT+TGG | 0.520854 | 8.3:+79961850 | None:intergenic |
| GTGGCATGCTTCTTCTGCAC+AGG | 0.521165 | 8.3:-79959084 | MS.gene39685:CDS |
| AAAGATCCAAGTATTCATGA+AGG | 0.528124 | 8.3:-79961659 | MS.gene39685:CDS |
| CTATCCCTCCAATTGAGTGC+TGG | 0.534831 | 8.3:+79961431 | None:intergenic |
| AACTGGTTTCTCTATATTTG+GGG | 0.546398 | 8.3:+79959001 | None:intergenic |
| AATCCCTTTAAGTGTTCTTG+AGG | 0.548348 | 8.3:-79961573 | MS.gene39685:CDS |
| AGGGATTGTTAGCAAAATCA+AGG | 0.554990 | 8.3:-79961639 | MS.gene39685:CDS |
| GTTCTTGAGGAGTTGAAAGA+TGG | 0.560926 | 8.3:-79961560 | MS.gene39685:CDS |
| GATCACCAGCACTCAATTGG+AGG | 0.562233 | 8.3:-79961436 | MS.gene39685:CDS |
| CTGGTTTCTCTATATTTGGG+GGG | 0.562935 | 8.3:+79959003 | None:intergenic |
| GAATTTGATGAAACAAAAGC+TGG | 0.578863 | 8.3:-79961812 | MS.gene39685:CDS |
| AGAGTAGTTGCTAATCAAGT+TGG | 0.583780 | 8.3:-79959120 | MS.gene39685:CDS |
| AAGGAAGCATGTGAAACTTG+GGG | 0.598891 | 8.3:-79961620 | MS.gene39685:CDS |
| GTAAAAGGACTTGTTGATGA+AGG | 0.601280 | 8.3:-79961788 | MS.gene39685:CDS |
| AAAATTACTATTATAAACAA+AGG | 0.603110 | 8.3:+79961469 | None:intergenic |
| ATATCTTTAAGGTCTATGAC+AGG | 0.607735 | 8.3:+79961689 | None:intergenic |
| AAGATCCAAGTATTCATGAA+GGG | 0.609526 | 8.3:-79961658 | MS.gene39685:CDS |
| TATACATACCTGCATACCAC+AGG | 0.614887 | 8.3:+79961359 | None:intergenic |
| CATACCACAGGAAACTCTTG+TGG | 0.616140 | 8.3:+79961371 | None:intergenic |
| ACTGGTTTCTCTATATTTGG+GGG | 0.617756 | 8.3:+79959002 | None:intergenic |
| ATCACCAGCACTCAATTGGA+GGG | 0.619946 | 8.3:-79961435 | MS.gene39685:CDS |
| AGTTGGTCCAAGAATATCTG+TGG | 0.650665 | 8.3:-79959103 | MS.gene39685:CDS |
| TGTGGTTTGAGAGTATCAGG+TGG | 0.653132 | 8.3:+79961389 | None:intergenic |
| GGTCTATGACAGGAATAACA+TGG | 0.670694 | 8.3:+79961699 | None:intergenic |
| AGGAAGCATGTGAAACTTGG+GGG | 0.692972 | 8.3:-79961619 | MS.gene39685:CDS |
| CAAACCACAAGAGTTTCCTG+TGG | 0.722761 | 8.3:-79961375 | MS.gene39685:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTACTATTATAAACAA+AGG | + | chr8.3:79959399-79959418 | None:intergenic | 10.0% |
| !! | CAAACATATCAAATAAAAAA+TGG | + | chr8.3:79961527-79961546 | None:intergenic | 15.0% |
| !! | TCAAATAAAAAATGGAAAAA+AGG | + | chr8.3:79961519-79961538 | None:intergenic | 15.0% |
| !! | TTCAATTAGACAAAAAAATA+AGG | + | chr8.3:79960071-79960090 | None:intergenic | 15.0% |
| !!! | AGTTTTCAATATTTGTATTA+AGG | + | chr8.3:79961198-79961217 | None:intergenic | 15.0% |
| !!! | TAAATTAGATTAGTCATTTT+AGG | + | chr8.3:79960903-79960922 | None:intergenic | 15.0% |
| !! | AACTCTTAATATACATCAAA+TGG | + | chr8.3:79960983-79961002 | None:intergenic | 20.0% |
| !! | AGAGATATACTAATAGAATA+TGG | - | chr8.3:79960432-79960451 | MS.gene39685:intron | 20.0% |
| !! | ATATAAATTCTTAGAAATCG+TGG | + | chr8.3:79959780-79959799 | None:intergenic | 20.0% |
| !! | ATGATAATAACCAAATTTCA+AGG | + | chr8.3:79959557-79959576 | None:intergenic | 20.0% |
| !! | CTTTATTACCAATATCTTTA+AGG | + | chr8.3:79959190-79959209 | None:intergenic | 20.0% |
| !! | GAGATATACTAATAGAATAT+GGG | - | chr8.3:79960433-79960452 | MS.gene39685:intron | 20.0% |
| !! | TAATCTAATTTATCTATCTC+AGG | - | chr8.3:79960911-79960930 | MS.gene39685:intron | 20.0% |
| !! | TAATTAGAGAGAAAAAATTG+TGG | + | chr8.3:79960397-79960416 | None:intergenic | 20.0% |
| !! | TTTAATAAAAAGAGGCTTAT+TGG | + | chr8.3:79961252-79961271 | None:intergenic | 20.0% |
| !! | TTTGCCTATTTAATAAAAAG+AGG | + | chr8.3:79961260-79961279 | None:intergenic | 20.0% |
| !!! | CATCGATACATTTTAAAATA+AGG | + | chr8.3:79960254-79960273 | None:intergenic | 20.0% |
| !!! | CATTTCTAGTAAATATGAAA+AGG | + | chr8.3:79960294-79960313 | None:intergenic | 20.0% |
| !!! | TAAGCCTCTTTTTATTAAAT+AGG | - | chr8.3:79961253-79961272 | MS.gene39685:intron | 20.0% |
| !!! | TGAAGCAATGTTTTAAAAAT+TGG | - | chr8.3:79961351-79961370 | MS.gene39685:intron | 20.0% |
| !!! | TTTCCGTATTATTTTTTATC+CGG | - | chr8.3:79961552-79961571 | MS.gene39685:CDS | 20.0% |
| ! | AAAATGGAAAAAAGGAAAAG+CGG | + | chr8.3:79961511-79961530 | None:intergenic | 25.0% |
| ! | AAGTTCTTTATGACGATAAA+TGG | - | chr8.3:79960676-79960695 | MS.gene39685:intron | 25.0% |
| ! | ATATTGAAAACTGCATAACT+TGG | - | chr8.3:79961206-79961225 | MS.gene39685:intron | 25.0% |
| ! | ATTTATCGTCATAAAGAACT+TGG | + | chr8.3:79960677-79960696 | None:intergenic | 25.0% |
| ! | CTAGTTCAATAGTTTGAATT+GGG | + | chr8.3:79961386-79961405 | None:intergenic | 25.0% |
| ! | GAACCGGATAAAAAATAATA+CGG | + | chr8.3:79961558-79961577 | None:intergenic | 25.0% |
| ! | GACTAGAGATATTAGAAAAA+AGG | + | chr8.3:79960176-79960195 | None:intergenic | 25.0% |
| ! | TCTGATAATAGTTCCTTTAT+AGG | + | chr8.3:79961835-79961854 | None:intergenic | 25.0% |
| ! | TGGTAATACTGAATTCAATT+GGG | - | chr8.3:79961451-79961470 | MS.gene39685:CDS | 25.0% |
| ! | TTCAATATAGAATCAAGGTT+AGG | + | chr8.3:79959023-79959042 | None:intergenic | 25.0% |
| ! | TTTGTCTAATTGAAGTAACA+GGG | - | chr8.3:79960077-79960096 | MS.gene39685:intron | 25.0% |
| !! | AAACTGGTTTCTCTATATTT+GGG | + | chr8.3:79961868-79961887 | None:intergenic | 25.0% |
| !! | AATATCTACCTTGTTCATTT+TGG | + | chr8.3:79960811-79960830 | None:intergenic | 25.0% |
| !! | GTTGATTCAATATAGAATCA+AGG | + | chr8.3:79959028-79959047 | None:intergenic | 25.0% |
| !! | TTTTGTCTAATTGAAGTAAC+AGG | - | chr8.3:79960076-79960095 | MS.gene39685:intron | 25.0% |
| !!! | TTGGACCTTTTGTTATAATT+GGG | - | chr8.3:79959628-79959647 | MS.gene39685:intron | 25.0% |
| !!! | TTTGGACCTTTTGTTATAAT+TGG | - | chr8.3:79959627-79959646 | MS.gene39685:intron | 25.0% |
| !!! | TTTTCATAGTTTGTATCAGT+TGG | + | chr8.3:79960356-79960375 | None:intergenic | 25.0% |
| !!! | TTTTGTTATAATTGGGCAAA+CGG | - | chr8.3:79959635-79959654 | MS.gene39685:intron | 25.0% |
| !!! | TTTTTTCAGGTTGTTAATCA+TGG | - | chr8.3:79959269-79959288 | MS.gene39685:intron | 25.0% |
| AAAGATCCAAGTATTCATGA+AGG | - | chr8.3:79959206-79959225 | MS.gene39685:intron | 30.0% | |
| AAATTCTTAGAAATCGTGGT+TGG | + | chr8.3:79959776-79959795 | None:intergenic | 30.0% | |
| AAGATCCAAGTATTCATGAA+GGG | - | chr8.3:79959207-79959226 | MS.gene39685:intron | 30.0% | |
| AATTCTTAGAAATCGTGGTT+GGG | + | chr8.3:79959775-79959794 | None:intergenic | 30.0% | |
| ACATAACACCTCAAATAAGA+TGG | + | chr8.3:79961081-79961100 | None:intergenic | 30.0% | |
| ACCAAACCATTTGAAAGATA+TGG | - | chr8.3:79960518-79960537 | MS.gene39685:intron | 30.0% | |
| AGAAGAGAACAAAAGAACAA+AGG | + | chr8.3:79959872-79959891 | None:intergenic | 30.0% | |
| AGCTTGAGTATGACTTAAAT+AGG | + | chr8.3:79960150-79960169 | None:intergenic | 30.0% | |
| CAAACAAGTACTACATCATT+AGG | + | chr8.3:79961318-79961337 | None:intergenic | 30.0% | |
| CACAATCCATATCTTTCAAA+TGG | + | chr8.3:79960527-79960546 | None:intergenic | 30.0% | |
| CAGACCAAAGGTTATAAAAT+AGG | - | chr8.3:79960864-79960883 | MS.gene39685:intron | 30.0% | |
| CCAATTCAAACTATTGAACT+AGG | - | chr8.3:79961384-79961403 | MS.gene39685:CDS | 30.0% | |
| CCTAGTTCAATAGTTTGAAT+TGG | + | chr8.3:79961387-79961406 | None:intergenic | 30.0% | |
| CTGACAATGTGTTTATAAGT+GGG | - | chr8.3:79959706-79959725 | MS.gene39685:intron | 30.0% | |
| CTGGTAATACTGAATTCAAT+TGG | - | chr8.3:79961450-79961469 | MS.gene39685:CDS | 30.0% | |
| GAATTTGATGAAACAAAAGC+TGG | - | chr8.3:79959053-79959072 | MS.gene39685:CDS | 30.0% | |
| GGTTATACTAATTAACTCAC+AGG | - | chr8.3:79960932-79960951 | MS.gene39685:intron | 30.0% | |
| GTAATGTACCAAAATGAACA+AGG | - | chr8.3:79960800-79960819 | MS.gene39685:intron | 30.0% | |
| GTCATAGACCTTAAAGATAT+TGG | - | chr8.3:79959179-79959198 | MS.gene39685:intron | 30.0% | |
| GTGAAGTCTATCATACTAAT+CGG | + | chr8.3:79961296-79961315 | None:intergenic | 30.0% | |
| GTTTCATAGGACTTAAGTTA+AGG | - | chr8.3:79960030-79960049 | MS.gene39685:intron | 30.0% | |
| GTTTGCCCAATTATAACAAA+AGG | + | chr8.3:79959636-79959655 | None:intergenic | 30.0% | |
| TAAATGAATGTAACCACACA+TGG | + | chr8.3:79959946-79959965 | None:intergenic | 30.0% | |
| TATATTGTAAACAGTGTCGT+TGG | - | chr8.3:79959901-79959920 | MS.gene39685:intron | 30.0% | |
| TCCATATCTTTCAAATGGTT+TGG | + | chr8.3:79960522-79960541 | None:intergenic | 30.0% | |
| TGACAATGTGTTTATAAGTG+GGG | - | chr8.3:79959707-79959726 | MS.gene39685:intron | 30.0% | |
| TTACCAGACTACAATGTAAT+CGG | + | chr8.3:79961437-79961456 | None:intergenic | 30.0% | |
| TTTGAGGGATATAGTTTATG+TGG | + | chr8.3:79961158-79961177 | None:intergenic | 30.0% | |
| ! | AAAATCTCGCATTTTCAACT+TGG | - | chr8.3:79961021-79961040 | MS.gene39685:intron | 30.0% |
| ! | AACTGGTTTCTCTATATTTG+GGG | + | chr8.3:79961867-79961886 | None:intergenic | 30.0% |
| ! | GAAACTGGTTTCTCTATATT+TGG | + | chr8.3:79961869-79961888 | None:intergenic | 30.0% |
| ! | GTGTCCTATTTTATAACCTT+TGG | + | chr8.3:79960871-79960890 | None:intergenic | 30.0% |
| ! | TCCATAATCCATCTTATTTG+AGG | - | chr8.3:79961070-79961089 | MS.gene39685:intron | 30.0% |
| ! | TGTATGAAATGTGTTTTCGT+TGG | - | chr8.3:79960211-79960230 | MS.gene39685:intron | 30.0% |
| !! | ACCTCAAATAAGATGGATTA+TGG | + | chr8.3:79961074-79961093 | None:intergenic | 30.0% |
| !! | ATATCTTTAAGGTCTATGAC+AGG | + | chr8.3:79959179-79959198 | None:intergenic | 30.0% |
| !!! | GGATAGTTTTATGTGTTACT+TGG | - | chr8.3:79959451-79959470 | MS.gene39685:intron | 30.0% |
| AAAAAGAGGCTTATTGGCAA+AGG | + | chr8.3:79961246-79961265 | None:intergenic | 35.0% | |
| AAAGCTCTATGGACCTATAA+AGG | - | chr8.3:79961819-79961838 | MS.gene39685:CDS | 35.0% | |
| AACTCCTCAAGAACACTTAA+AGG | + | chr8.3:79959299-79959318 | None:intergenic | 35.0% | |
| AATAACATGGCTCATGTTGT+TGG | + | chr8.3:79959156-79959175 | None:intergenic | 35.0% | |
| AATCCCTTTAAGTGTTCTTG+AGG | - | chr8.3:79959292-79959311 | MS.gene39685:intron | 35.0% | |
| ACAATCCCTTCATGAATACT+TGG | + | chr8.3:79959215-79959234 | None:intergenic | 35.0% | |
| ACTATATCCCTCAAACTGAT+AGG | - | chr8.3:79961163-79961182 | MS.gene39685:intron | 35.0% | |
| ACTCCTCAAGAACACTTAAA+GGG | + | chr8.3:79959298-79959317 | None:intergenic | 35.0% | |
| AGAGTAGTTGCTAATCAAGT+TGG | - | chr8.3:79961745-79961764 | MS.gene39685:CDS | 35.0% | |
| AGGGATTGTTAGCAAAATCA+AGG | - | chr8.3:79959226-79959245 | MS.gene39685:intron | 35.0% | |
| AGTATGACTTAAATAGGCAG+CGG | + | chr8.3:79960144-79960163 | None:intergenic | 35.0% | |
| ATGCATCTCTTTCACAAGAA+AGG | - | chr8.3:79960311-79960330 | MS.gene39685:intron | 35.0% | |
| ATTGATATAACACCTGTACC+TGG | - | chr8.3:79960699-79960718 | MS.gene39685:intron | 35.0% | |
| CATAAGTTCGATATCTGGTT+TGG | - | chr8.3:79961611-79961630 | MS.gene39685:CDS | 35.0% | |
| CCACTTATAAACACATTGTC+AGG | + | chr8.3:79959708-79959727 | None:intergenic | 35.0% | |
| CCTGACAATGTGTTTATAAG+TGG | - | chr8.3:79959705-79959724 | MS.gene39685:intron | 35.0% | |
| CTCCAATGTTAGTGTTTCAT+AGG | - | chr8.3:79960017-79960036 | MS.gene39685:intron | 35.0% | |
| GAAACAAAAGCTGGTGTAAA+AGG | - | chr8.3:79959062-79959081 | MS.gene39685:CDS | 35.0% | |
| GGAAACACATGATGAATCTA+GGG | - | chr8.3:79960454-79960473 | MS.gene39685:intron | 35.0% | |
| GGTACATTACGAACAGTTTA+TGG | + | chr8.3:79960790-79960809 | None:intergenic | 35.0% | |
| GTCCTATGAAACACTAACAT+TGG | + | chr8.3:79960022-79960041 | None:intergenic | 35.0% | |
| TATAGAATCAAGGTTAGGCT+TGG | + | chr8.3:79959018-79959037 | None:intergenic | 35.0% | |
| TCATACTAATCGGAGAAACA+TGG | + | chr8.3:79961286-79961305 | None:intergenic | 35.0% | |
| TTATGTTAAGAGTCCCACAT+CGG | - | chr8.3:79959671-79959690 | MS.gene39685:intron | 35.0% | |
| TTGAAAACTGCATAACTTGG+AGG | - | chr8.3:79961209-79961228 | MS.gene39685:intron | 35.0% | |
| TTTACTTGGTTCAACTGAAC+CGG | + | chr8.3:79961574-79961593 | None:intergenic | 35.0% | |
| ! | AAAGATATGGATTGTGCAGA+AGG | - | chr8.3:79960531-79960550 | MS.gene39685:intron | 35.0% |
| ! | AAGATATGGATTGTGCAGAA+GGG | - | chr8.3:79960532-79960551 | MS.gene39685:intron | 35.0% |
| ! | ACTGGTTTCTCTATATTTGG+GGG | + | chr8.3:79961866-79961885 | None:intergenic | 35.0% |
| ! | AGTTGAAAGATGGTGTTAAG+AGG | - | chr8.3:79959315-79959334 | MS.gene39685:intron | 35.0% |
| ! | GTAGCACTGAAATTTCAGAT+TGG | - | chr8.3:79959579-79959598 | MS.gene39685:intron | 35.0% |
| ! | TCATAATGTGTTTTGCACTG+AGG | - | chr8.3:79960837-79960856 | MS.gene39685:intron | 35.0% |
| ! | TTGGCTTTCTCATATTTGTC+AGG | + | chr8.3:79959137-79959156 | None:intergenic | 35.0% |
| !! | CATATTTGTCAGGTTGATGA+TGG | + | chr8.3:79959127-79959146 | None:intergenic | 35.0% |
| !! | GAATTGTTGTCAGAAGCATT+AGG | - | chr8.3:79960489-79960508 | MS.gene39685:intron | 35.0% |
| !! | GGTTGATGATGGAATAATTC+AGG | + | chr8.3:79959116-79959135 | None:intergenic | 35.0% |
| !! | GTAAAAGGACTTGTTGATGA+AGG | - | chr8.3:79959077-79959096 | MS.gene39685:CDS | 35.0% |
| !! | TCTTTTGTGTCACTCTACTA+TGG | - | chr8.3:79961105-79961124 | MS.gene39685:intron | 35.0% |
| AAGCATGCCACAGATATTCT+TGG | + | chr8.3:79961772-79961791 | None:intergenic | 40.0% | |
| ACATTAACTATGAGAGCTCC+AGG | + | chr8.3:79960720-79960739 | None:intergenic | 40.0% | |
| ACCAGTTCCTATCAGTTTGA+GGG | + | chr8.3:79961173-79961192 | None:intergenic | 40.0% | |
| AGCGGTTGAATTGATTGAAC+CGG | + | chr8.3:79961493-79961512 | None:intergenic | 40.0% | |
| AGTTGGTCCAAGAATATCTG+TGG | - | chr8.3:79961762-79961781 | MS.gene39685:CDS | 40.0% | |
| ATAGATCACCAGCACTCAAT+TGG | - | chr8.3:79959426-79959445 | MS.gene39685:intron | 40.0% | |
| ATCGAACTTATGAGACCTCT+AGG | + | chr8.3:79961603-79961622 | None:intergenic | 40.0% | |
| CATCTCTTTCACAAGAAAGG+TGG | - | chr8.3:79960314-79960333 | MS.gene39685:intron | 40.0% | |
| CCAAGTAAACCATAACCTAG+AGG | - | chr8.3:79961585-79961604 | MS.gene39685:CDS | 40.0% | |
| CCTCTAGGTTATGGTTTACT+TGG | + | chr8.3:79961588-79961607 | None:intergenic | 40.0% | |
| CTGGTTTCTCTATATTTGGG+GGG | + | chr8.3:79961865-79961884 | None:intergenic | 40.0% | |
| CTTATGAGACCTCTAGGTTA+TGG | + | chr8.3:79961597-79961616 | None:intergenic | 40.0% | |
| CTTGGTTTCAAGCATATAGC+AGG | - | chr8.3:79961039-79961058 | MS.gene39685:intron | 40.0% | |
| GATCCGATTACATTGTAGTC+TGG | - | chr8.3:79961431-79961450 | MS.gene39685:CDS | 40.0% | |
| GGAGCTCTCATAGTTAATGT+CGG | - | chr8.3:79960720-79960739 | MS.gene39685:intron | 40.0% | |
| GGGAAACACATGATGAATCT+AGG | - | chr8.3:79960453-79960472 | MS.gene39685:intron | 40.0% | |
| GGTCTATGACAGGAATAACA+TGG | + | chr8.3:79959169-79959188 | None:intergenic | 40.0% | |
| GGTCTCATAAGTTCGATATC+TGG | - | chr8.3:79961606-79961625 | MS.gene39685:CDS | 40.0% | |
| GTGCTTCTACAAGACCATAT+CGG | - | chr8.3:79960645-79960664 | MS.gene39685:intron | 40.0% | |
| GTTCTTGAGGAGTTGAAAGA+TGG | - | chr8.3:79959305-79959324 | MS.gene39685:intron | 40.0% | |
| TACCAGTTCCTATCAGTTTG+AGG | + | chr8.3:79961174-79961193 | None:intergenic | 40.0% | |
| TATACATACCTGCATACCAC+AGG | + | chr8.3:79959509-79959528 | None:intergenic | 40.0% | |
| TATAGGTCCATAGAGCTTTG+AGG | + | chr8.3:79961818-79961837 | None:intergenic | 40.0% | |
| TGGCTATGAGCTAGATAGAA+AGG | + | chr8.3:79960963-79960982 | None:intergenic | 40.0% | |
| TTCATGCGCTCCTTGAAATT+TGG | - | chr8.3:79959544-79959563 | MS.gene39685:intron | 40.0% | |
| ! | AAGGAAGCATGTGAAACTTG+GGG | - | chr8.3:79959245-79959264 | MS.gene39685:intron | 40.0% |
| ! | CAAGGAAGCATGTGAAACTT+GGG | - | chr8.3:79959244-79959263 | MS.gene39685:intron | 40.0% |
| ! | TAATGTCGGAGATCTTTTGC+AGG | - | chr8.3:79960734-79960753 | MS.gene39685:intron | 40.0% |
| ! | TAGAGTGTCTGACATGTGTT+TGG | - | chr8.3:79959609-79959628 | MS.gene39685:intron | 40.0% |
| ! | TCAAGGAAGCATGTGAAACT+TGG | - | chr8.3:79959243-79959262 | MS.gene39685:intron | 40.0% |
| !! | TCTTGTGGTTTGAGAGTATC+AGG | + | chr8.3:79959482-79959501 | None:intergenic | 40.0% |
| !!! | TGAAACTTGGGGGTTTTTTC+AGG | - | chr8.3:79959256-79959275 | MS.gene39685:intron | 40.0% |
| AAGAGTTTCCTGTGGTATGC+AGG | - | chr8.3:79959498-79959517 | MS.gene39685:intron | 45.0% | |
| ACAAGACACTGATCCATGTG+TGG | - | chr8.3:79959930-79959949 | MS.gene39685:intron | 45.0% | |
| AGGTCATCCTCAAAGCTCTA+TGG | - | chr8.3:79961808-79961827 | MS.gene39685:CDS | 45.0% | |
| ATCACCAGCACTCAATTGGA+GGG | - | chr8.3:79959430-79959449 | MS.gene39685:intron | 45.0% | |
| CAAACCACAAGAGTTTCCTG+TGG | - | chr8.3:79959490-79959509 | MS.gene39685:intron | 45.0% | |
| CAAACTACCGATGAACTGGA+TGG | + | chr8.3:79961412-79961431 | None:intergenic | 45.0% | |
| CACTGAGGAAAACAGACCAA+AGG | - | chr8.3:79960852-79960871 | MS.gene39685:intron | 45.0% | |
| CAGGACAAGGAGGATAGTAA+TGG | + | chr8.3:79960572-79960591 | None:intergenic | 45.0% | |
| CATACCACAGGAAACTCTTG+TGG | + | chr8.3:79959497-79959516 | None:intergenic | 45.0% | |
| CTAACACAACCCCACAAAAC+CGG | + | chr8.3:79959751-79959770 | None:intergenic | 45.0% | |
| CTAGGTACCATCCAGTTCAT+CGG | - | chr8.3:79961402-79961421 | MS.gene39685:CDS | 45.0% | |
| CTTCTACAAGACCATATCGG+TGG | - | chr8.3:79960648-79960667 | MS.gene39685:intron | 45.0% | |
| GCTTCTTCTGCACAGGTATT+AGG | - | chr8.3:79961788-79961807 | MS.gene39685:CDS | 45.0% | |
| GGATCAAACTACCGATGAAC+TGG | + | chr8.3:79961416-79961435 | None:intergenic | 45.0% | |
| GGGATAGAACTGTGTTCAAC+CGG | - | chr8.3:79961471-79961490 | MS.gene39685:CDS | 45.0% | |
| TCCCTCAAACTGATAGGAAC+TGG | - | chr8.3:79961169-79961188 | MS.gene39685:intron | 45.0% | |
| TTAAGAGTCCCACATCGGAT+AGG | - | chr8.3:79959676-79959695 | MS.gene39685:intron | 45.0% | |
| ! | AGGAAGCATGTGAAACTTGG+GGG | - | chr8.3:79959246-79959265 | MS.gene39685:intron | 45.0% |
| !! | ACCTTACAAGCCGGTTTTGT+GGG | - | chr8.3:79959738-79959757 | MS.gene39685:intron | 45.0% |
| !! | TGTGGTTTGAGAGTATCAGG+TGG | + | chr8.3:79959479-79959498 | None:intergenic | 45.0% |
| ACTATGAGAGCTCCAGGTAC+AGG | + | chr8.3:79960714-79960733 | None:intergenic | 50.0% | |
| AGGGACTGAAATTCGCAGCA+AGG | - | chr8.3:79960096-79960115 | MS.gene39685:intron | 50.0% | |
| CCTGAACCAGAACTGACAGT+GGG | - | chr8.3:79960588-79960607 | MS.gene39685:intron | 50.0% | |
| CTATCCCTCCAATTGAGTGC+TGG | + | chr8.3:79959437-79959456 | None:intergenic | 50.0% | |
| GAACTTGGAGACCACCGATA+TGG | + | chr8.3:79960662-79960681 | None:intergenic | 50.0% | |
| GATCACCAGCACTCAATTGG+AGG | - | chr8.3:79959429-79959448 | MS.gene39685:intron | 50.0% | |
| GCAATCCTCACCTTACAAGC+CGG | - | chr8.3:79959729-79959748 | MS.gene39685:intron | 50.0% | |
| GTTGTTCCCACTGTCAGTTC+TGG | + | chr8.3:79960597-79960616 | None:intergenic | 50.0% | |
| TCCTGAACCAGAACTGACAG+TGG | - | chr8.3:79960587-79960606 | MS.gene39685:intron | 50.0% | |
| ! | GTTAGGCTTGGTTGTACCTG+TGG | + | chr8.3:79959006-79959025 | None:intergenic | 50.0% |
| !! | AGTTCTGGTTCAGGACAAGG+AGG | + | chr8.3:79960582-79960601 | None:intergenic | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr8.3:79959737-79959756 | None:intergenic | 50.0% |
| !! | CACCTTACAAGCCGGTTTTG+TGG | - | chr8.3:79959737-79959756 | MS.gene39685:intron | 50.0% |
| !! | CCTTACAAGCCGGTTTTGTG+GGG | - | chr8.3:79959739-79959758 | MS.gene39685:intron | 50.0% |
| !! | CGGTTTTGTGGGGTTGTGTT+AGG | - | chr8.3:79959749-79959768 | MS.gene39685:intron | 50.0% |
| !! | GGTCTTGTAGAAGCACTGTG+AGG | + | chr8.3:79960641-79960660 | None:intergenic | 50.0% |
| !! | GTCAGTTCTGGTTCAGGACA+AGG | + | chr8.3:79960585-79960604 | None:intergenic | 50.0% |
| AGGCCATCACCTATCCGATG+TGG | + | chr8.3:79959688-79959707 | None:intergenic | 55.0% | |
| GGCCATCACCTATCCGATGT+GGG | + | chr8.3:79959687-79959706 | None:intergenic | 55.0% | |
| GTCCCACATCGGATAGGTGA+TGG | - | chr8.3:79959682-79959701 | MS.gene39685:intron | 55.0% | |
| GTGGCATGCTTCTTCTGCAC+AGG | - | chr8.3:79961781-79961800 | MS.gene39685:CDS | 55.0% | |
| !! | CCCACTGTCAGTTCTGGTTC+AGG | + | chr8.3:79960591-79960610 | None:intergenic | 55.0% |
| !! | CCCCACAAAACCGGCTTGTA+AGG | + | chr8.3:79959742-79959761 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 79958996 | 79961891 | 79958996 | ID=MS.gene39685 |
| chr8.3 | mRNA | 79958996 | 79961891 | 79958996 | ID=MS.gene39685.t1;Parent=MS.gene39685 |
| chr8.3 | exon | 79961368 | 79961891 | 79961368 | ID=MS.gene39685.t1.exon1;Parent=MS.gene39685.t1 |
| chr8.3 | CDS | 79961368 | 79961891 | 79961368 | ID=cds.MS.gene39685.t1;Parent=MS.gene39685.t1 |
| chr8.3 | exon | 79958996 | 79959161 | 79958996 | ID=MS.gene39685.t1.exon2;Parent=MS.gene39685.t1 |
| chr8.3 | CDS | 79958996 | 79959161 | 79958996 | ID=cds.MS.gene39685.t1;Parent=MS.gene39685.t1 |
| Gene Sequence |
| Protein sequence |
