Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08906.t1 | XP_013446521.1 | 95.5 | 660 | 29 | 1 | 1 | 659 | 1 | 660 | 0.00E+00 | 1102 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08906.t1 | A0A072TUM3 | 95.5 | 660 | 29 | 1 | 1 | 659 | 1 | 660 | 0.0e+00 | 1102.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049134 | MS.gene08906 | -0.804931 | 1.70E-49 | -1.69E-46 |
| MS.gene049149 | MS.gene08906 | 0.858582 | 7.46E-63 | -1.69E-46 |
| MS.gene049150 | MS.gene08906 | 0.865452 | 5.85E-65 | -1.69E-46 |
| MS.gene049151 | MS.gene08906 | 0.824777 | 6.72E-54 | -1.69E-46 |
| MS.gene049153 | MS.gene08906 | 0.878022 | 3.93E-69 | -1.69E-46 |
| MS.gene049356 | MS.gene08906 | 0.803728 | 3.04E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene08906 | 0.829443 | 5.13E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene08906 | 0.825429 | 4.71E-54 | -1.69E-46 |
| MS.gene049910 | MS.gene08906 | 0.831634 | 1.49E-55 | -1.69E-46 |
| MS.gene049993 | MS.gene08906 | 0.838526 | 2.73E-57 | -1.69E-46 |
| MS.gene050060 | MS.gene08906 | 0.839534 | 1.50E-57 | -1.69E-46 |
| MS.gene050128 | MS.gene08906 | 0.822237 | 2.64E-53 | -1.69E-46 |
| MS.gene050133 | MS.gene08906 | -0.815077 | 1.11E-51 | -1.69E-46 |
| MS.gene050168 | MS.gene08906 | 0.814716 | 1.34E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene08906 | 0.800236 | 1.58E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene08906 | 0.822644 | 2.12E-53 | -1.69E-46 |
| MS.gene050400 | MS.gene08906 | 0.802278 | 6.05E-49 | -1.69E-46 |
| MS.gene050406 | MS.gene08906 | 0.804165 | 2.46E-49 | -1.69E-46 |
| MS.gene050426 | MS.gene08906 | -0.878115 | 3.64E-69 | -1.69E-46 |
| MS.gene050464 | MS.gene08906 | 0.851618 | 7.89E-61 | -1.69E-46 |
| MS.gene050529 | MS.gene08906 | 0.824656 | 7.17E-54 | -1.69E-46 |
| MS.gene050623 | MS.gene08906 | -0.80077 | 1.23E-48 | -1.69E-46 |
| MS.gene050642 | MS.gene08906 | 0.840104 | 1.06E-57 | -1.69E-46 |
| MS.gene050670 | MS.gene08906 | 0.860246 | 2.36E-63 | -1.69E-46 |
| MS.gene050820 | MS.gene08906 | 0.807055 | 6.09E-50 | -1.69E-46 |
| MS.gene050900 | MS.gene08906 | 0.800815 | 1.21E-48 | -1.69E-46 |
| MS.gene050971 | MS.gene08906 | 0.817001 | 4.13E-52 | -1.69E-46 |
| MS.gene051373 | MS.gene08906 | 0.831837 | 1.33E-55 | -1.69E-46 |
| MS.gene051521 | MS.gene08906 | 0.837552 | 4.86E-57 | -1.69E-46 |
| MS.gene051525 | MS.gene08906 | 0.851855 | 6.76E-61 | -1.69E-46 |
| MS.gene051582 | MS.gene08906 | 0.84137 | 4.95E-58 | -1.69E-46 |
| MS.gene051588 | MS.gene08906 | 0.810687 | 1.02E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene08906 | 0.868303 | 7.22E-66 | -1.69E-46 |
| MS.gene051983 | MS.gene08906 | 0.882117 | 1.36E-70 | -1.69E-46 |
| MS.gene052011 | MS.gene08906 | -0.867658 | 1.16E-65 | -1.69E-46 |
| MS.gene052077 | MS.gene08906 | 0.886435 | 3.43E-72 | -1.69E-46 |
| MS.gene052134 | MS.gene08906 | 0.826577 | 2.51E-54 | -1.69E-46 |
| MS.gene052135 | MS.gene08906 | 0.843585 | 1.28E-58 | -1.69E-46 |
| MS.gene052159 | MS.gene08906 | 0.815667 | 8.22E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene08906 | 0.856047 | 4.19E-62 | -1.69E-46 |
| MS.gene052253 | MS.gene08906 | 0.852295 | 5.07E-61 | -1.69E-46 |
| MS.gene052255 | MS.gene08906 | 0.814121 | 1.81E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene08906 | 0.862282 | 5.66E-64 | -1.69E-46 |
| MS.gene052414 | MS.gene08906 | 0.812018 | 5.24E-51 | -1.69E-46 |
| MS.gene052469 | MS.gene08906 | 0.805892 | 1.07E-49 | -1.69E-46 |
| MS.gene052758 | MS.gene08906 | 0.815898 | 7.30E-52 | -1.69E-46 |
| MS.gene05316 | MS.gene08906 | 0.860262 | 2.34E-63 | -1.69E-46 |
| MS.gene053176 | MS.gene08906 | 0.823694 | 1.21E-53 | -1.69E-46 |
| MS.gene053330 | MS.gene08906 | 0.816835 | 4.51E-52 | -1.69E-46 |
| MS.gene053494 | MS.gene08906 | 0.874462 | 6.63E-68 | -1.69E-46 |
| MS.gene053557 | MS.gene08906 | 0.829073 | 6.31E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene08906 | 0.848 | 8.10E-60 | -1.69E-46 |
| MS.gene053928 | MS.gene08906 | 0.835941 | 1.25E-56 | -1.69E-46 |
| MS.gene054102 | MS.gene08906 | 0.820893 | 5.39E-53 | -1.69E-46 |
| MS.gene054108 | MS.gene08906 | 0.813397 | 2.61E-51 | -1.69E-46 |
| MS.gene054123 | MS.gene08906 | 0.80957 | 1.77E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene08906 | 0.890639 | 8.21E-74 | -1.69E-46 |
| MS.gene05432 | MS.gene08906 | 0.802514 | 5.41E-49 | -1.69E-46 |
| MS.gene054349 | MS.gene08906 | 0.862438 | 5.07E-64 | -1.69E-46 |
| MS.gene054548 | MS.gene08906 | 0.809142 | 2.19E-50 | -1.69E-46 |
| MS.gene054556 | MS.gene08906 | 0.843992 | 9.96E-59 | -1.69E-46 |
| MS.gene054719 | MS.gene08906 | 0.82478 | 6.70E-54 | -1.69E-46 |
| MS.gene054918 | MS.gene08906 | 0.826376 | 2.81E-54 | -1.69E-46 |
| MS.gene054930 | MS.gene08906 | 0.851177 | 1.05E-60 | -1.69E-46 |
| MS.gene054983 | MS.gene08906 | 0.825635 | 4.21E-54 | -1.69E-46 |
| MS.gene055116 | MS.gene08906 | 0.835987 | 1.22E-56 | -1.69E-46 |
| MS.gene055211 | MS.gene08906 | 0.821012 | 5.06E-53 | -1.69E-46 |
| MS.gene055367 | MS.gene08906 | 0.80071 | 1.27E-48 | -1.69E-46 |
| MS.gene055369 | MS.gene08906 | 0.85181 | 6.96E-61 | -1.69E-46 |
| MS.gene055539 | MS.gene08906 | 0.811534 | 6.67E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene08906 | 0.899254 | 2.38E-77 | -1.69E-46 |
| MS.gene05556 | MS.gene08906 | 0.848045 | 7.87E-60 | -1.69E-46 |
| MS.gene055604 | MS.gene08906 | 0.816483 | 5.40E-52 | -1.69E-46 |
| MS.gene055666 | MS.gene08906 | 0.803383 | 3.58E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene08906 | 0.853443 | 2.38E-61 | -1.69E-46 |
| MS.gene055859 | MS.gene08906 | 0.802374 | 5.78E-49 | -1.69E-46 |
| MS.gene05594 | MS.gene08906 | 0.80354 | 3.32E-49 | -1.69E-46 |
| MS.gene056233 | MS.gene08906 | 0.835889 | 1.29E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene08906 | 0.825216 | 5.29E-54 | -1.69E-46 |
| MS.gene056447 | MS.gene08906 | 0.838047 | 3.63E-57 | -1.69E-46 |
| MS.gene056514 | MS.gene08906 | 0.819514 | 1.12E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene08906 | 0.809135 | 2.20E-50 | -1.69E-46 |
| MS.gene056659 | MS.gene08906 | 0.842925 | 1.92E-58 | -1.69E-46 |
| MS.gene056723 | MS.gene08906 | 0.877154 | 7.89E-69 | -1.69E-46 |
| MS.gene056899 | MS.gene08906 | -0.851998 | 6.16E-61 | -1.69E-46 |
| MS.gene056979 | MS.gene08906 | 0.872398 | 3.28E-67 | -1.69E-46 |
| MS.gene05702 | MS.gene08906 | 0.816408 | 5.62E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene08906 | 0.824683 | 7.07E-54 | -1.69E-46 |
| MS.gene057396 | MS.gene08906 | 0.898463 | 5.18E-77 | -1.69E-46 |
| MS.gene057448 | MS.gene08906 | 0.842575 | 2.38E-58 | -1.69E-46 |
| MS.gene057449 | MS.gene08906 | 0.832143 | 1.12E-55 | -1.69E-46 |
| MS.gene057450 | MS.gene08906 | 0.837784 | 4.24E-57 | -1.69E-46 |
| MS.gene057469 | MS.gene08906 | 0.810691 | 1.02E-50 | -1.69E-46 |
| MS.gene057476 | MS.gene08906 | 0.815613 | 8.45E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene08906 | 0.816032 | 6.82E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene08906 | 0.810068 | 1.39E-50 | -1.69E-46 |
| MS.gene057825 | MS.gene08906 | 0.824963 | 6.07E-54 | -1.69E-46 |
| MS.gene057996 | MS.gene08906 | 0.808078 | 3.70E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene08906 | 0.832486 | 9.20E-56 | -1.69E-46 |
| MS.gene058007 | MS.gene08906 | 0.819461 | 1.15E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene08906 | 0.813507 | 2.47E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene08906 | 0.877414 | 6.41E-69 | -1.69E-46 |
| MS.gene058276 | MS.gene08906 | 0.817053 | 4.03E-52 | -1.69E-46 |
| MS.gene058371 | MS.gene08906 | 0.800638 | 1.31E-48 | -1.69E-46 |
| MS.gene058435 | MS.gene08906 | 0.837518 | 4.96E-57 | -1.69E-46 |
| MS.gene05856 | MS.gene08906 | 0.808511 | 2.99E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene08906 | 0.836051 | 1.17E-56 | -1.69E-46 |
| MS.gene058710 | MS.gene08906 | 0.829814 | 4.17E-55 | -1.69E-46 |
| MS.gene05886 | MS.gene08906 | 0.833625 | 4.79E-56 | -1.69E-46 |
| MS.gene058928 | MS.gene08906 | 0.815841 | 7.52E-52 | -1.69E-46 |
| MS.gene058949 | MS.gene08906 | 0.842696 | 2.21E-58 | -1.69E-46 |
| MS.gene059011 | MS.gene08906 | 0.848149 | 7.37E-60 | -1.69E-46 |
| MS.gene05907 | MS.gene08906 | 0.845477 | 3.96E-59 | -1.69E-46 |
| MS.gene059082 | MS.gene08906 | 0.835177 | 1.95E-56 | -1.69E-46 |
| MS.gene059247 | MS.gene08906 | 0.85158 | 8.09E-61 | -1.69E-46 |
| MS.gene059285 | MS.gene08906 | 0.860291 | 2.29E-63 | -1.69E-46 |
| MS.gene059294 | MS.gene08906 | 0.803792 | 2.94E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene08906 | 0.889966 | 1.51E-73 | -1.69E-46 |
| MS.gene059462 | MS.gene08906 | 0.8493 | 3.53E-60 | -1.69E-46 |
| MS.gene05959 | MS.gene08906 | 0.80298 | 4.34E-49 | -1.69E-46 |
| MS.gene059609 | MS.gene08906 | 0.860168 | 2.49E-63 | -1.69E-46 |
| MS.gene059688 | MS.gene08906 | 0.807265 | 5.50E-50 | -1.69E-46 |
| MS.gene059788 | MS.gene08906 | 0.818619 | 1.78E-52 | -1.69E-46 |
| MS.gene059807 | MS.gene08906 | 0.83228 | 1.03E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene08906 | 0.848318 | 6.61E-60 | -1.69E-46 |
| MS.gene059868 | MS.gene08906 | 0.823511 | 1.33E-53 | -1.69E-46 |
| MS.gene059876 | MS.gene08906 | 0.807048 | 6.11E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene08906 | 0.818164 | 2.26E-52 | -1.69E-46 |
| MS.gene059899 | MS.gene08906 | 0.816232 | 6.15E-52 | -1.69E-46 |
| MS.gene059933 | MS.gene08906 | 0.806363 | 8.53E-50 | -1.69E-46 |
| MS.gene059958 | MS.gene08906 | 0.844339 | 8.04E-59 | -1.69E-46 |
| MS.gene060247 | MS.gene08906 | 0.84623 | 2.47E-59 | -1.69E-46 |
| MS.gene060403 | MS.gene08906 | 0.818667 | 1.74E-52 | -1.69E-46 |
| MS.gene060407 | MS.gene08906 | 0.806113 | 9.63E-50 | -1.69E-46 |
| MS.gene060495 | MS.gene08906 | 0.842371 | 2.69E-58 | -1.69E-46 |
| MS.gene060942 | MS.gene08906 | 0.810423 | 1.16E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene08906 | 0.8347 | 2.57E-56 | -1.69E-46 |
| MS.gene061049 | MS.gene08906 | 0.85728 | 1.82E-62 | -1.69E-46 |
| MS.gene061051 | MS.gene08906 | -0.813067 | 3.09E-51 | -1.69E-46 |
| MS.gene061114 | MS.gene08906 | -0.856257 | 3.64E-62 | -1.69E-46 |
| MS.gene061154 | MS.gene08906 | 0.854307 | 1.34E-61 | -1.69E-46 |
| MS.gene061159 | MS.gene08906 | 0.884617 | 1.65E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08906.t1 | MTR_8g080080 | 94.848 | 660 | 33 | 1 | 1 | 659 | 1 | 660 | 0.0 | 1303 |
| MS.gene08906.t1 | MTR_3g085830 | 58.285 | 688 | 234 | 19 | 1 | 658 | 1 | 665 | 0.0 | 733 |
| MS.gene08906.t1 | MTR_6g022830 | 48.571 | 665 | 303 | 17 | 1 | 635 | 1 | 656 | 0.0 | 543 |
| MS.gene08906.t1 | MTR_6g023070 | 45.118 | 594 | 285 | 16 | 67 | 635 | 16 | 593 | 5.11e-141 | 425 |
| MS.gene08906.t1 | MTR_7g117620 | 31.500 | 200 | 107 | 6 | 211 | 382 | 98 | 295 | 1.10e-16 | 84.0 |
| MS.gene08906.t1 | MTR_7g100430 | 29.293 | 198 | 122 | 5 | 189 | 386 | 162 | 341 | 3.81e-13 | 72.8 |
| MS.gene08906.t1 | MTR_7g100430 | 27.652 | 264 | 158 | 11 | 133 | 385 | 65 | 306 | 8.49e-11 | 65.5 |
| MS.gene08906.t1 | MTR_2g101310 | 27.717 | 184 | 109 | 4 | 220 | 382 | 139 | 319 | 7.09e-13 | 72.0 |
| MS.gene08906.t1 | MTR_4g062100 | 30.256 | 195 | 120 | 3 | 102 | 296 | 70 | 248 | 7.66e-13 | 72.0 |
| MS.gene08906.t1 | MTR_4g062100 | 24.528 | 212 | 142 | 3 | 188 | 399 | 108 | 301 | 1.34e-11 | 67.8 |
| MS.gene08906.t1 | MTR_1g115575 | 29.091 | 220 | 128 | 5 | 102 | 320 | 131 | 323 | 9.66e-13 | 71.6 |
| MS.gene08906.t1 | MTR_2g101310 | 27.717 | 184 | 109 | 4 | 220 | 382 | 139 | 319 | 1.01e-12 | 71.2 |
| MS.gene08906.t1 | MTR_7g100390 | 28.796 | 191 | 118 | 4 | 106 | 295 | 53 | 226 | 1.55e-12 | 70.9 |
| MS.gene08906.t1 | MTR_2g096190 | 24.823 | 282 | 175 | 9 | 106 | 382 | 31 | 280 | 2.03e-12 | 70.5 |
| MS.gene08906.t1 | MTR_2g096190 | 27.957 | 186 | 116 | 4 | 221 | 405 | 101 | 269 | 2.82e-12 | 70.1 |
| MS.gene08906.t1 | MTR_1g032100 | 26.776 | 183 | 116 | 4 | 212 | 393 | 82 | 247 | 6.36e-11 | 65.9 |
| MS.gene08906.t1 | MTR_5g026800 | 31.707 | 164 | 92 | 6 | 189 | 352 | 15 | 158 | 6.79e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08906.t1 | AT3G01750 | 49.310 | 580 | 265 | 9 | 1 | 559 | 1 | 572 | 0.0 | 535 |
| MS.gene08906.t1 | AT3G01750 | 49.310 | 580 | 265 | 9 | 1 | 559 | 1 | 572 | 0.0 | 535 |
| MS.gene08906.t1 | AT3G04140 | 43.750 | 672 | 323 | 17 | 1 | 650 | 1 | 639 | 1.56e-160 | 476 |
| MS.gene08906.t1 | AT1G07710 | 30.698 | 215 | 128 | 7 | 98 | 311 | 99 | 293 | 4.56e-14 | 75.9 |
| MS.gene08906.t1 | AT1G07710 | 25.887 | 282 | 174 | 9 | 105 | 382 | 30 | 280 | 7.91e-13 | 72.0 |
| MS.gene08906.t1 | AT1G07710 | 25.688 | 218 | 145 | 4 | 188 | 405 | 69 | 269 | 9.79e-12 | 68.6 |
| MS.gene08906.t1 | AT1G07710 | 30.698 | 215 | 128 | 7 | 98 | 311 | 99 | 293 | 4.56e-14 | 75.9 |
| MS.gene08906.t1 | AT1G07710 | 25.887 | 282 | 174 | 9 | 105 | 382 | 30 | 280 | 7.91e-13 | 72.0 |
| MS.gene08906.t1 | AT1G07710 | 25.688 | 218 | 145 | 4 | 188 | 405 | 69 | 269 | 9.79e-12 | 68.6 |
| MS.gene08906.t1 | AT5G02620 | 27.551 | 196 | 122 | 5 | 188 | 382 | 94 | 270 | 2.38e-12 | 70.5 |
| MS.gene08906.t1 | AT5G02620 | 27.551 | 196 | 122 | 5 | 188 | 382 | 94 | 270 | 2.38e-12 | 70.5 |
| MS.gene08906.t1 | AT5G02620 | 27.551 | 196 | 122 | 5 | 188 | 382 | 94 | 270 | 2.38e-12 | 70.5 |
| MS.gene08906.t1 | AT2G31820 | 28.962 | 183 | 106 | 6 | 221 | 382 | 224 | 403 | 6.53e-12 | 69.3 |
| MS.gene08906.t1 | AT5G02620 | 30.625 | 160 | 92 | 4 | 188 | 346 | 94 | 235 | 2.44e-11 | 67.0 |
| MS.gene08906.t1 | AT5G02620 | 30.625 | 160 | 92 | 4 | 188 | 346 | 94 | 235 | 2.44e-11 | 67.0 |
| MS.gene08906.t1 | AT3G09550 | 26.606 | 218 | 134 | 5 | 102 | 319 | 150 | 341 | 6.55e-11 | 65.9 |
| MS.gene08906.t1 | AT3G09550 | 26.606 | 218 | 134 | 5 | 102 | 319 | 143 | 334 | 6.72e-11 | 65.9 |
| MS.gene08906.t1 | AT3G09550 | 26.606 | 218 | 134 | 5 | 102 | 319 | 143 | 334 | 6.72e-11 | 65.9 |
Find 100 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGACTAGTGGTGTTAAT+TGG | 0.207448 | 4.4:+16815448 | MS.gene08906:CDS |
| AAGAATTTCCAATCTCATTA+AGG | 0.276743 | 4.4:+16815592 | MS.gene08906:CDS |
| TGCTGCTTCTGCTGGTGATT+TGG | 0.292656 | 4.4:+16813715 | MS.gene08906:CDS |
| ATCATCGTCTTCAAATTCTA+AGG | 0.293118 | 4.4:-16815529 | None:intergenic |
| TCTCTCATTCGTGGTGGATA+TGG | 0.311166 | 4.4:+16813674 | MS.gene08906:CDS |
| TATCTTTGCCTTAATGAGAT+TGG | 0.319231 | 4.4:-16815600 | None:intergenic |
| CCTAATGCAAGGTGTAATTA+AGG | 0.327932 | 4.4:+16815716 | MS.gene08906:CDS |
| TGATATTCTAAATGAAGTTC+CGG | 0.337345 | 4.4:-16815307 | None:intergenic |
| ACAAAAGAACACTATCTATA+AGG | 0.350958 | 4.4:+16815649 | MS.gene08906:CDS |
| TTGAAAACTCGTCATGGTAT+TGG | 0.358691 | 4.4:+16815276 | MS.gene08906:CDS |
| TCAGTAGAGTTTATAATATC+AGG | 0.361249 | 4.4:-16814757 | None:intergenic |
| CCTTAATTACACCTTGCATT+AGG | 0.369020 | 4.4:-16815716 | None:intergenic |
| AGATTGTGGTATTGTTGAAT+TGG | 0.372361 | 4.4:+16813883 | MS.gene08906:CDS |
| CAAGAGGGAGATAGTGAATA+GGG | 0.378021 | 4.4:+16813931 | MS.gene08906:CDS |
| TTGTATACTGCTGCTTCTGC+TGG | 0.379152 | 4.4:+16813707 | MS.gene08906:CDS |
| TTTCTTCATATGGCAATGTA+TGG | 0.383930 | 4.4:+16814898 | MS.gene08906:CDS |
| TTAATAATTCTGTAAGTTCA+AGG | 0.385745 | 4.4:+16815556 | MS.gene08906:CDS |
| CTGCTGCTAGAGGAGGGAAT+TGG | 0.395808 | 4.4:+16813963 | MS.gene08906:CDS |
| TGCTGCTAGAGGAGGGAATT+GGG | 0.409718 | 4.4:+16813964 | MS.gene08906:CDS |
| GTTGAGAAGGGATTCTTTGT+TGG | 0.411093 | 4.4:+16813754 | MS.gene08906:CDS |
| AATTCAGAAGATCTTGATCT+TGG | 0.413086 | 4.4:-16815174 | None:intergenic |
| TTCTTACTTTCCTCTACGTT+GGG | 0.414168 | 4.4:+16813400 | MS.gene08906:CDS |
| TACCCAGCAGTTGAACTATA+AGG | 0.415427 | 4.4:+16815851 | MS.gene08906:CDS |
| TGGAGCACAAGGGCAGGCTT+TGG | 0.420864 | 4.4:+16815917 | MS.gene08906:CDS |
| CAAGACTAGTGGTGTTAATT+GGG | 0.421578 | 4.4:+16815449 | MS.gene08906:CDS |
| TTTGCAGCTGCTAAATCAAT+AGG | 0.426019 | 4.4:-16813455 | None:intergenic |
| ATGTATGGTTTCACAAATCC+TGG | 0.427463 | 4.4:+16814913 | MS.gene08906:CDS |
| ATCAATGTCAAGAACAATGT+TGG | 0.432252 | 4.4:+16815015 | MS.gene08906:CDS |
| TCAAGAGGGAGATAGTGAAT+AGG | 0.438387 | 4.4:+16813930 | MS.gene08906:CDS |
| AAAAGTGTCTCCATTGTGAT+TGG | 0.439400 | 4.4:-16814878 | None:intergenic |
| GCTCCTTATAGTTCAACTGC+TGG | 0.450607 | 4.4:-16815854 | None:intergenic |
| GATATTCTAAATGAAGTTCC+GGG | 0.452704 | 4.4:-16815306 | None:intergenic |
| TGCTCTAACGGACCAATAGA+TGG | 0.459067 | 4.4:+16815822 | MS.gene08906:CDS |
| CGAAAAGGTTGCGAACATAA+AGG | 0.466998 | 4.4:+16814987 | MS.gene08906:CDS |
| TGAGAAGATTTGTATCATGA+TGG | 0.469922 | 4.4:-16813508 | None:intergenic |
| TGAGTTATTACTAACCGAAA+AGG | 0.479208 | 4.4:+16814972 | MS.gene08906:CDS |
| CTTAACATTCGCGACGCAGA+TGG | 0.490419 | 4.4:+16815120 | MS.gene08906:CDS |
| TTGCATTCAGCAGCTGGAAG+AGG | 0.493545 | 4.4:+16814064 | MS.gene08906:CDS |
| ATTGATTTAGCAGCTGCAAA+TGG | 0.494631 | 4.4:+16813458 | MS.gene08906:CDS |
| TTATCTTATAGAGATGTTCA+AGG | 0.496796 | 4.4:+16814031 | MS.gene08906:CDS |
| TCAATGTCAAGAACAATGTT+GGG | 0.501046 | 4.4:+16815016 | MS.gene08906:CDS |
| TTCTTCTACGCCACTTGAGA+AGG | 0.501910 | 4.4:-16815491 | None:intergenic |
| TTGGATGAAGGTGTTGGTGG+TGG | 0.504868 | 4.4:+16813902 | MS.gene08906:CDS |
| CTTCTTACTTTCCTCTACGT+TGG | 0.504888 | 4.4:+16813399 | MS.gene08906:CDS |
| TGTTTATGAATTGTTGAGAA+GGG | 0.505920 | 4.4:+16813742 | MS.gene08906:CDS |
| GGACTGCCCTCTTGCTCTAA+CGG | 0.508812 | 4.4:+16815810 | MS.gene08906:CDS |
| GGTATTGTTGAATTGGATGA+AGG | 0.511469 | 4.4:+16813890 | MS.gene08906:CDS |
| AGCTGGAAGAGGCCAGGTTG+AGG | 0.513559 | 4.4:+16814075 | MS.gene08906:CDS |
| GAGTGTGAAGAAACAGCAAC+AGG | 0.514596 | 4.4:+16813644 | MS.gene08906:CDS |
| GCTCTCTTGGGAAAAGATTG+TGG | 0.515816 | 4.4:+16813869 | MS.gene08906:CDS |
| CACAAACATGTTGATACACT+GGG | 0.530524 | 4.4:+16815789 | MS.gene08906:CDS |
| CTCATTCGTGGTGGATATGG+TGG | 0.531172 | 4.4:+16813677 | MS.gene08906:CDS |
| TTCAGCAGCTGGAAGAGGCC+AGG | 0.531435 | 4.4:+16814069 | MS.gene08906:CDS |
| AAAACTCGTCATGGTATTGG+AGG | 0.532617 | 4.4:+16815279 | MS.gene08906:CDS |
| CATGGTATTGGAGGTAGTCC+CGG | 0.533373 | 4.4:+16815288 | MS.gene08906:CDS |
| CTCCTTATAGTTCAACTGCT+GGG | 0.535241 | 4.4:-16815853 | None:intergenic |
| GTTGAATTGGATGAAGGTGT+TGG | 0.536043 | 4.4:+16813896 | MS.gene08906:CDS |
| GCACAAACATGTTGATACAC+TGG | 0.536271 | 4.4:+16815788 | MS.gene08906:CDS |
| GTGTTAATTGGGCCGCGAGA+CGG | 0.548204 | 4.4:+16815460 | MS.gene08906:CDS |
| GAATTGGATGAAGGTGTTGG+TGG | 0.556011 | 4.4:+16813899 | MS.gene08906:CDS |
| CCTCTACGTTGGGAGAGCAC+AGG | 0.559069 | 4.4:+16813410 | MS.gene08906:CDS |
| TAGGTGTTGCATACCACCAT+TGG | 0.559115 | 4.4:-16813436 | None:intergenic |
| TTGTTTATGAATTGTTGAGA+AGG | 0.562613 | 4.4:+16813741 | MS.gene08906:CDS |
| GCTATTCATGCTGCTGCTAG+AGG | 0.565183 | 4.4:+16813953 | MS.gene08906:CDS |
| TGCAATGAAAATGATCAAGC+AGG | 0.567272 | 4.4:+16815354 | MS.gene08906:CDS |
| GGAACAAACTCTCTCATTCG+TGG | 0.569551 | 4.4:+16813665 | MS.gene08906:CDS |
| TTGTCTAGTCTGCAGAAACC+AGG | 0.572724 | 4.4:-16814931 | None:intergenic |
| TAACGGACCAATAGATGGTG+GGG | 0.576593 | 4.4:+16815827 | MS.gene08906:CDS |
| CAACGTAGAGGAAAGTAAGA+AGG | 0.582105 | 4.4:-16813398 | None:intergenic |
| TATTGGTCCGTTAGAGCAAG+AGG | 0.583336 | 4.4:-16815817 | None:intergenic |
| TGTGAGTCCTTACCTCAACC+TGG | 0.583391 | 4.4:-16814087 | None:intergenic |
| ATTCATGCTGCTGCTAGAGG+AGG | 0.586565 | 4.4:+16813956 | MS.gene08906:CDS |
| CTAACGGACCAATAGATGGT+GGG | 0.592448 | 4.4:+16815826 | MS.gene08906:CDS |
| TTACAGAGGTTACCTTCATG+TGG | 0.604215 | 4.4:+16814813 | MS.gene08906:CDS |
| TTACATGTGGCTTCTTACAG+AGG | 0.606656 | 4.4:+16814799 | MS.gene08906:CDS |
| TTCACTGCAGGCCTAATGCA+AGG | 0.610079 | 4.4:+16815705 | MS.gene08906:CDS |
| TTCATGCTGCTGCTAGAGGA+GGG | 0.615437 | 4.4:+16813957 | MS.gene08906:CDS |
| ACTCATTTGAAAACTCGTCA+TGG | 0.623099 | 4.4:+16815270 | MS.gene08906:CDS |
| ATATGCTTTATGCTGCAGCT+AGG | 0.623467 | 4.4:+16813807 | MS.gene08906:CDS |
| TTCGTGGTGGATATGGTGGA+TGG | 0.624766 | 4.4:+16813681 | MS.gene08906:CDS |
| TTAGAATCTCTACCACATGA+AGG | 0.626407 | 4.4:-16814825 | None:intergenic |
| GGGAGAGCACAGGAGACCAA+TGG | 0.629721 | 4.4:+16813420 | MS.gene08906:CDS |
| TCTAACGGACCAATAGATGG+TGG | 0.643080 | 4.4:+16815825 | MS.gene08906:CDS |
| AGCTAGGAGTAAGAATTCTG+AGG | 0.643118 | 4.4:+16813823 | MS.gene08906:CDS |
| AGGTAATGCCGCATTACATG+TGG | 0.644420 | 4.4:+16814786 | MS.gene08906:CDS |
| AACGGACCAATAGATGGTGG+GGG | 0.644986 | 4.4:+16815828 | MS.gene08906:CDS |
| ACTAGTCTTGCTGTTACATG+AGG | 0.645032 | 4.4:-16815436 | None:intergenic |
| TCATGTAACAGCAAGACTAG+TGG | 0.650511 | 4.4:+16815438 | MS.gene08906:CDS |
| GGTTAATGAACCTTCTCAAG+TGG | 0.653219 | 4.4:+16815481 | MS.gene08906:CDS |
| TCGTCGACTAGAAACTGTGT+GGG | 0.654713 | 4.4:+16813556 | MS.gene08906:CDS |
| GTAAGAAGCCACATGTAATG+CGG | 0.659012 | 4.4:-16814794 | None:intergenic |
| CCTGTGCTCTCCCAACGTAG+AGG | 0.659563 | 4.4:-16813410 | None:intergenic |
| ACAAAGTTAACCAATCACAA+TGG | 0.661701 | 4.4:+16814868 | MS.gene08906:CDS |
| AGAGCACAGGAGACCAATGG+TGG | 0.668331 | 4.4:+16813423 | MS.gene08906:CDS |
| ACAAACTCTCTCATTCGTGG+TGG | 0.676010 | 4.4:+16813668 | MS.gene08906:CDS |
| TTCGTCGACTAGAAACTGTG+TGG | 0.676029 | 4.4:+16813555 | MS.gene08906:CDS |
| ATAAACTCTACTGATGCACA+AGG | 0.678669 | 4.4:+16814766 | MS.gene08906:CDS |
| TTGATGATGTTGCAAAGTGT+AGG | 0.682820 | 4.4:+16813594 | MS.gene08906:CDS |
| ATTGGTCCGTTAGAGCAAGA+GGG | 0.692608 | 4.4:-16815816 | None:intergenic |
| AAGGTTCATTAACCGTCTCG+CGG | 0.699125 | 4.4:-16815472 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATAATTAATGATGC+AGG | + | chr4.4:16814708-16814727 | MS.gene08906:intron | 15.0% |
| !!! | TATAATTTTGTTATTTTCAG+TGG | + | chr4.4:16814530-16814549 | MS.gene08906:intron | 15.0% |
| !! | CAGTTAATACTAAATAATCT+AGG | + | chr4.4:16814626-16814645 | MS.gene08906:intron | 20.0% |
| !! | CTAAATAATCTAGGAATAAA+AGG | + | chr4.4:16814635-16814654 | MS.gene08906:intron | 20.0% |
| !! | TATAAAATTGTCCCTAAAAA+TGG | - | chr4.4:16814514-16814533 | None:intergenic | 20.0% |
| !! | TTAATAATTCTGTAAGTTCA+AGG | + | chr4.4:16815556-16815575 | MS.gene08906:CDS | 20.0% |
| !!! | ATGAACAAGTATTTTTCTTT+TGG | + | chr4.4:16815897-16815916 | MS.gene08906:CDS | 20.0% |
| !!! | ATTTTAGAGACAAAATCATA+TGG | - | chr4.4:16814391-16814410 | None:intergenic | 20.0% |
| !!! | CTTTTTTTCAAATAATCAAG+AGG | - | chr4.4:16815153-16815172 | None:intergenic | 20.0% |
| ! | AAGAATTTCCAATCTCATTA+AGG | + | chr4.4:16815592-16815611 | MS.gene08906:CDS | 25.0% |
| ! | AAGTTCAAGGAAAAATGATT+TGG | + | chr4.4:16815569-16815588 | MS.gene08906:CDS | 25.0% |
| ! | AATAATCTAGGAATAAAAGG+AGG | + | chr4.4:16814638-16814657 | MS.gene08906:intron | 25.0% |
| ! | ACAAAAGAACACTATCTATA+AGG | + | chr4.4:16815649-16815668 | MS.gene08906:CDS | 25.0% |
| ! | ACAAAATCATATGGTTTCTA+GGG | - | chr4.4:16814382-16814401 | None:intergenic | 25.0% |
| ! | ATCAACTTTATAATGTGATG+GGG | + | chr4.4:16814483-16814502 | MS.gene08906:intron | 25.0% |
| ! | GATCAACTTTATAATGTGAT+GGG | + | chr4.4:16814482-16814501 | MS.gene08906:intron | 25.0% |
| ! | TAAATAATTAATGATGCAGG+TGG | + | chr4.4:16814711-16814730 | MS.gene08906:intron | 25.0% |
| ! | TCAGTAGAGTTTATAATATC+AGG | - | chr4.4:16814760-16814779 | None:intergenic | 25.0% |
| ! | TGATATTCTAAATGAAGTTC+CGG | - | chr4.4:16815310-16815329 | None:intergenic | 25.0% |
| ! | TGATCAACTTTATAATGTGA+TGG | + | chr4.4:16814481-16814500 | MS.gene08906:intron | 25.0% |
| ! | TGTTTATGAATTGTTGAGAA+GGG | + | chr4.4:16813742-16813761 | MS.gene08906:CDS | 25.0% |
| ! | TTATCTTATAGAGATGTTCA+AGG | + | chr4.4:16814031-16814050 | MS.gene08906:CDS | 25.0% |
| ! | TTGTTTATGAATTGTTGAGA+AGG | + | chr4.4:16813741-16813760 | MS.gene08906:CDS | 25.0% |
| !!! | GTGAAATATTTTTTTGCAGA+TGG | - | chr4.4:16815690-16815709 | None:intergenic | 25.0% |
| AAGGTAAAGACACAAAAAGA+AGG | + | chr4.4:16815735-16815754 | MS.gene08906:CDS | 30.0% | |
| AATTCAGAAGATCTTGATCT+TGG | - | chr4.4:16815177-16815196 | None:intergenic | 30.0% | |
| ACAAAGTTAACCAATCACAA+TGG | + | chr4.4:16814868-16814887 | MS.gene08906:CDS | 30.0% | |
| AGATTGTGGTATTGTTGAAT+TGG | + | chr4.4:16813883-16813902 | MS.gene08906:CDS | 30.0% | |
| AGGTAAAGACACAAAAAGAA+GGG | + | chr4.4:16815736-16815755 | MS.gene08906:CDS | 30.0% | |
| ATCAATGTCAAGAACAATGT+TGG | + | chr4.4:16815015-16815034 | MS.gene08906:CDS | 30.0% | |
| ATCATCGTCTTCAAATTCTA+AGG | - | chr4.4:16815532-16815551 | None:intergenic | 30.0% | |
| GACAAAATCATATGGTTTCT+AGG | - | chr4.4:16814383-16814402 | None:intergenic | 30.0% | |
| GATATTCTAAATGAAGTTCC+GGG | - | chr4.4:16815309-16815328 | None:intergenic | 30.0% | |
| GCAAAAAAATATTTCACTGC+AGG | + | chr4.4:16815693-16815712 | MS.gene08906:CDS | 30.0% | |
| TATCTTTGCCTTAATGAGAT+TGG | - | chr4.4:16815603-16815622 | None:intergenic | 30.0% | |
| TCAATGTCAAGAACAATGTT+GGG | + | chr4.4:16815016-16815035 | MS.gene08906:CDS | 30.0% | |
| TGAGAAGATTTGTATCATGA+TGG | - | chr4.4:16813511-16813530 | None:intergenic | 30.0% | |
| TGAGTTATTACTAACCGAAA+AGG | + | chr4.4:16814972-16814991 | MS.gene08906:CDS | 30.0% | |
| TTTCTTCATATGGCAATGTA+TGG | + | chr4.4:16814898-16814917 | MS.gene08906:CDS | 30.0% | |
| ! | ATTCTTGATTTTGCTCTCTT+GGG | + | chr4.4:16813857-16813876 | MS.gene08906:CDS | 30.0% |
| ! | GATCGAAGATTTTCAATTTC+AGG | - | chr4.4:16814437-16814456 | None:intergenic | 30.0% |
| !! | ATTTTAGTCCCTCACTATTT+CGG | - | chr4.4:16814569-16814588 | None:intergenic | 30.0% |
| !! | TGTCTCTAAAATTGTAGAAC+CGG | + | chr4.4:16814399-16814418 | MS.gene08906:intron | 30.0% |
| !!! | ATTTTTCTTTTGGAGCACAA+GGG | + | chr4.4:16815907-16815926 | MS.gene08906:CDS | 30.0% |
| !!! | GATAGTGTTCTTTTGTTGTT+TGG | - | chr4.4:16815645-16815664 | None:intergenic | 30.0% |
| !!! | TATTTTTCTTTTGGAGCACA+AGG | + | chr4.4:16815906-16815925 | MS.gene08906:CDS | 30.0% |
| !!! | TATTTTTTTGCAGATGGAGT+TGG | - | chr4.4:16815684-16815703 | None:intergenic | 30.0% |
| ACTATTTCGGTAGAGCAATT+CGG | - | chr4.4:16814556-16814575 | None:intergenic | 35.0% | |
| ACTCATTTGAAAACTCGTCA+TGG | + | chr4.4:16815270-16815289 | MS.gene08906:CDS | 35.0% | |
| ATAAACTCTACTGATGCACA+AGG | + | chr4.4:16814766-16814785 | MS.gene08906:CDS | 35.0% | |
| ATGTATGGTTTCACAAATCC+TGG | + | chr4.4:16814913-16814932 | MS.gene08906:CDS | 35.0% | |
| CACAAACATGTTGATACACT+GGG | + | chr4.4:16815789-16815808 | MS.gene08906:CDS | 35.0% | |
| CCTAATGCAAGGTGTAATTA+AGG | + | chr4.4:16815716-16815735 | MS.gene08906:CDS | 35.0% | |
| CCTTAATTACACCTTGCATT+AGG | - | chr4.4:16815719-16815738 | None:intergenic | 35.0% | |
| CTATGTCACATTCTAAACAC+TGG | + | chr4.4:16814307-16814326 | MS.gene08906:intron | 35.0% | |
| GGTATTGTTGAATTGGATGA+AGG | + | chr4.4:16813890-16813909 | MS.gene08906:CDS | 35.0% | |
| TGCAATGAAAATGATCAAGC+AGG | + | chr4.4:16815354-16815373 | MS.gene08906:CDS | 35.0% | |
| TTAGAATCTCTACCACATGA+AGG | - | chr4.4:16814828-16814847 | None:intergenic | 35.0% | |
| TTCTTACTTTCCTCTACGTT+GGG | + | chr4.4:16813400-16813419 | MS.gene08906:CDS | 35.0% | |
| TTGAAAACTCGTCATGGTAT+TGG | + | chr4.4:16815276-16815295 | MS.gene08906:CDS | 35.0% | |
| TTTCAGGATCAAATTGTGTC+CGG | - | chr4.4:16814421-16814440 | None:intergenic | 35.0% | |
| TTTGCAGCTGCTAAATCAAT+AGG | - | chr4.4:16813458-16813477 | None:intergenic | 35.0% | |
| ! | ATTGATTTAGCAGCTGCAAA+TGG | + | chr4.4:16813458-16813477 | MS.gene08906:CDS | 35.0% |
| ! | CAAGACTAGTGGTGTTAATT+GGG | + | chr4.4:16815449-16815468 | MS.gene08906:CDS | 35.0% |
| ! | CTTTATGTTCGCAACCTTTT+CGG | - | chr4.4:16814989-16815008 | None:intergenic | 35.0% |
| ! | GATTCTTGATTTTGCTCTCT+TGG | + | chr4.4:16813856-16813875 | MS.gene08906:CDS | 35.0% |
| ! | TGGAGACACTTTTCTTCATA+TGG | + | chr4.4:16814888-16814907 | MS.gene08906:CDS | 35.0% |
| !! | AAAAGTGTCTCCATTGTGAT+TGG | - | chr4.4:16814881-16814900 | None:intergenic | 35.0% |
| !! | ATGGGGAGTTTCCATTTTTA+GGG | + | chr4.4:16814500-16814519 | MS.gene08906:intron | 35.0% |
| !! | TTGATGATGTTGCAAAGTGT+AGG | + | chr4.4:16813594-16813613 | MS.gene08906:CDS | 35.0% |
| !!! | AGGGATTCTTTGTTGGTTTT+TGG | + | chr4.4:16813761-16813780 | MS.gene08906:CDS | 35.0% |
| !!! | TCTTTGTTGGTTTTTGGTGA+AGG | + | chr4.4:16813767-16813786 | MS.gene08906:CDS | 35.0% |
| AGCTAGGAGTAAGAATTCTG+AGG | + | chr4.4:16813823-16813842 | MS.gene08906:CDS | 40.0% | |
| ATATGCTTTATGCTGCAGCT+AGG | + | chr4.4:16813807-16813826 | MS.gene08906:CDS | 40.0% | |
| ATTGCTCTACCGAAATAGTG+AGG | + | chr4.4:16814557-16814576 | MS.gene08906:intron | 40.0% | |
| CAACGTAGAGGAAAGTAAGA+AGG | - | chr4.4:16813401-16813420 | None:intergenic | 40.0% | |
| CAAGAGGGAGATAGTGAATA+GGG | + | chr4.4:16813931-16813950 | MS.gene08906:CDS | 40.0% | |
| CGAAAAGGTTGCGAACATAA+AGG | + | chr4.4:16814987-16815006 | MS.gene08906:CDS | 40.0% | |
| CTCCTTATAGTTCAACTGCT+GGG | - | chr4.4:16815856-16815875 | None:intergenic | 40.0% | |
| CTTCTTACTTTCCTCTACGT+TGG | + | chr4.4:16813399-16813418 | MS.gene08906:CDS | 40.0% | |
| GCACAAACATGTTGATACAC+TGG | + | chr4.4:16815788-16815807 | MS.gene08906:CDS | 40.0% | |
| GGTTAATGAACCTTCTCAAG+TGG | + | chr4.4:16815481-16815500 | MS.gene08906:CDS | 40.0% | |
| GTAAGAAGCCACATGTAATG+CGG | - | chr4.4:16814797-16814816 | None:intergenic | 40.0% | |
| GTTGAGAAGGGATTCTTTGT+TGG | + | chr4.4:16813754-16813773 | MS.gene08906:CDS | 40.0% | |
| TACCCAGCAGTTGAACTATA+AGG | + | chr4.4:16815851-16815870 | MS.gene08906:CDS | 40.0% | |
| TCAAGAGGGAGATAGTGAAT+AGG | + | chr4.4:16813930-16813949 | MS.gene08906:CDS | 40.0% | |
| TCATGTAACAGCAAGACTAG+TGG | + | chr4.4:16815438-16815457 | MS.gene08906:CDS | 40.0% | |
| TTACAGAGGTTACCTTCATG+TGG | + | chr4.4:16814813-16814832 | MS.gene08906:CDS | 40.0% | |
| TTACATGTGGCTTCTTACAG+AGG | + | chr4.4:16814799-16814818 | MS.gene08906:CDS | 40.0% | |
| TTGCTCTACCGAAATAGTGA+GGG | + | chr4.4:16814558-16814577 | MS.gene08906:intron | 40.0% | |
| ! | AAAACTCGTCATGGTATTGG+AGG | + | chr4.4:16815279-16815298 | MS.gene08906:CDS | 40.0% |
| ! | GCAAGACTAGTGGTGTTAAT+TGG | + | chr4.4:16815448-16815467 | MS.gene08906:CDS | 40.0% |
| ! | GTTGAATTGGATGAAGGTGT+TGG | + | chr4.4:16813896-16813915 | MS.gene08906:CDS | 40.0% |
| ! | TTTCTAGGGATCATACAAGC+AGG | - | chr4.4:16814368-16814387 | None:intergenic | 40.0% |
| !! | ACTAGTCTTGCTGTTACATG+AGG | - | chr4.4:16815439-16815458 | None:intergenic | 40.0% |
| !! | CTTGCTATGAAGTACTGACA+TGG | + | chr4.4:16814207-16814226 | MS.gene08906:intron | 40.0% |
| !! | GATGGGGAGTTTCCATTTTT+AGG | + | chr4.4:16814499-16814518 | MS.gene08906:intron | 40.0% |
| !!! | GTTTTTGGTGAAGGAGAGTA+TGG | + | chr4.4:16813776-16813795 | MS.gene08906:CDS | 40.0% |
| AAGGTTCATTAACCGTCTCG+CGG | - | chr4.4:16815475-16815494 | None:intergenic | 45.0% | |
| ACAAACTCTCTCATTCGTGG+TGG | + | chr4.4:16813668-16813687 | MS.gene08906:CDS | 45.0% | |
| AGGTAATGCCGCATTACATG+TGG | + | chr4.4:16814786-16814805 | MS.gene08906:CDS | 45.0% | |
| ATTGGTCCGTTAGAGCAAGA+GGG | - | chr4.4:16815819-16815838 | None:intergenic | 45.0% | |
| GAGTGTGAAGAAACAGCAAC+AGG | + | chr4.4:16813644-16813663 | MS.gene08906:CDS | 45.0% | |
| GCTCCTTATAGTTCAACTGC+TGG | - | chr4.4:16815857-16815876 | None:intergenic | 45.0% | |
| GCTCTCTTGGGAAAAGATTG+TGG | + | chr4.4:16813869-16813888 | MS.gene08906:CDS | 45.0% | |
| GGAACAAACTCTCTCATTCG+TGG | + | chr4.4:16813665-16813684 | MS.gene08906:CDS | 45.0% | |
| GTCAGTACTTCATAGCAAGC+AGG | - | chr4.4:16814206-16814225 | None:intergenic | 45.0% | |
| TATTGGTCCGTTAGAGCAAG+AGG | - | chr4.4:16815820-16815839 | None:intergenic | 45.0% | |
| TTCTTCTACGCCACTTGAGA+AGG | - | chr4.4:16815494-16815513 | None:intergenic | 45.0% | |
| TTGTCTAGTCTGCAGAAACC+AGG | - | chr4.4:16814934-16814953 | None:intergenic | 45.0% | |
| ! | ACTGTTTTGCATTCAGCAGC+TGG | + | chr4.4:16814058-16814077 | MS.gene08906:CDS | 45.0% |
| ! | CTAACGGACCAATAGATGGT+GGG | + | chr4.4:16815826-16815845 | MS.gene08906:CDS | 45.0% |
| ! | TAACGGACCAATAGATGGTG+GGG | + | chr4.4:16815827-16815846 | MS.gene08906:CDS | 45.0% |
| ! | TAGGTGTTGCATACCACCAT+TGG | - | chr4.4:16813439-16813458 | None:intergenic | 45.0% |
| ! | TCGTCGACTAGAAACTGTGT+GGG | + | chr4.4:16813556-16813575 | MS.gene08906:CDS | 45.0% |
| ! | TCTAACGGACCAATAGATGG+TGG | + | chr4.4:16815825-16815844 | MS.gene08906:CDS | 45.0% |
| ! | TGCTCTAACGGACCAATAGA+TGG | + | chr4.4:16815822-16815841 | MS.gene08906:CDS | 45.0% |
| ! | TTCGTCGACTAGAAACTGTG+TGG | + | chr4.4:16813555-16813574 | MS.gene08906:CDS | 45.0% |
| ! | TTGTATACTGCTGCTTCTGC+TGG | + | chr4.4:16813707-16813726 | MS.gene08906:CDS | 45.0% |
| !! | GAATTGGATGAAGGTGTTGG+TGG | + | chr4.4:16813899-16813918 | MS.gene08906:CDS | 45.0% |
| !! | TCTCTCATTCGTGGTGGATA+TGG | + | chr4.4:16813674-16813693 | MS.gene08906:CDS | 45.0% |
| !!! | TGGTGGTGGAGTTTTCAAGA+GGG | + | chr4.4:16813916-16813935 | MS.gene08906:CDS | 45.0% |
| !!! | TTGGTGGTGGAGTTTTCAAG+AGG | + | chr4.4:16813915-16813934 | MS.gene08906:CDS | 45.0% |
| ATTCATGCTGCTGCTAGAGG+AGG | + | chr4.4:16813956-16813975 | MS.gene08906:CDS | 50.0% | |
| CTTAACATTCGCGACGCAGA+TGG | + | chr4.4:16815120-16815139 | MS.gene08906:CDS | 50.0% | |
| GCTATTCATGCTGCTGCTAG+AGG | + | chr4.4:16813953-16813972 | MS.gene08906:CDS | 50.0% | |
| GGTTGAGGTAAGGACTCACA+TGG | + | chr4.4:16814090-16814109 | MS.gene08906:intron | 50.0% | |
| TGCTGCTAGAGGAGGGAATT+GGG | + | chr4.4:16813964-16813983 | MS.gene08906:CDS | 50.0% | |
| TGTGAGTCCTTACCTCAACC+TGG | - | chr4.4:16814090-16814109 | None:intergenic | 50.0% | |
| TTCACTGCAGGCCTAATGCA+AGG | + | chr4.4:16815705-16815724 | MS.gene08906:CDS | 50.0% | |
| TTCATGCTGCTGCTAGAGGA+GGG | + | chr4.4:16813957-16813976 | MS.gene08906:CDS | 50.0% | |
| TTGCATTCAGCAGCTGGAAG+AGG | + | chr4.4:16814064-16814083 | MS.gene08906:CDS | 50.0% | |
| ! | AACGGACCAATAGATGGTGG+GGG | + | chr4.4:16815828-16815847 | MS.gene08906:CDS | 50.0% |
| ! | CATGGTATTGGAGGTAGTCC+CGG | + | chr4.4:16815288-16815307 | MS.gene08906:CDS | 50.0% |
| ! | TGCTGCTTCTGCTGGTGATT+TGG | + | chr4.4:16813715-16813734 | MS.gene08906:CDS | 50.0% |
| !! | CTCATTCGTGGTGGATATGG+TGG | + | chr4.4:16813677-16813696 | MS.gene08906:CDS | 50.0% |
| !! | TTCGTGGTGGATATGGTGGA+TGG | + | chr4.4:16813681-16813700 | MS.gene08906:CDS | 50.0% |
| !! | TTGGATGAAGGTGTTGGTGG+TGG | + | chr4.4:16813902-16813921 | MS.gene08906:CDS | 50.0% |
| !!! | TTCTTTTGGAGCACAAGGGC+AGG | + | chr4.4:16815911-16815930 | MS.gene08906:CDS | 50.0% |
| AGAGCACAGGAGACCAATGG+TGG | + | chr4.4:16813423-16813442 | MS.gene08906:CDS | 55.0% | |
| CTGCTGCTAGAGGAGGGAAT+TGG | + | chr4.4:16813963-16813982 | MS.gene08906:CDS | 55.0% | |
| GGACTGCCCTCTTGCTCTAA+CGG | + | chr4.4:16815810-16815829 | MS.gene08906:CDS | 55.0% | |
| GTGTTAATTGGGCCGCGAGA+CGG | + | chr4.4:16815460-16815479 | MS.gene08906:CDS | 55.0% | |
| TGGGTACCCCCACCATCTAT+TGG | - | chr4.4:16815837-16815856 | None:intergenic | 55.0% | |
| ! | GAAGAGGCCAGGTTGAGGTA+AGG | + | chr4.4:16814080-16814099 | MS.gene08906:intron | 55.0% |
| AGCTGGAAGAGGCCAGGTTG+AGG | + | chr4.4:16814075-16814094 | MS.gene08906:CDS | 60.0% | |
| CCTGTGCTCTCCCAACGTAG+AGG | - | chr4.4:16813413-16813432 | None:intergenic | 60.0% | |
| TGGAGCACAAGGGCAGGCTT+TGG | + | chr4.4:16815917-16815936 | MS.gene08906:CDS | 60.0% | |
| TTCAGCAGCTGGAAGAGGCC+AGG | + | chr4.4:16814069-16814088 | MS.gene08906:CDS | 60.0% | |
| ! | CCTCTACGTTGGGAGAGCAC+AGG | + | chr4.4:16813410-16813429 | MS.gene08906:CDS | 60.0% |
| ! | GGGAGAGCACAGGAGACCAA+TGG | + | chr4.4:16813420-16813439 | MS.gene08906:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 16813392 | 16816004 | 16813392 | ID=MS.gene08906 |
| chr4.4 | mRNA | 16813392 | 16816004 | 16813392 | ID=MS.gene08906.t1;Parent=MS.gene08906 |
| chr4.4 | exon | 16813392 | 16814096 | 16813392 | ID=MS.gene08906.t1.exon1;Parent=MS.gene08906.t1 |
| chr4.4 | CDS | 16813392 | 16814096 | 16813392 | ID=cds.MS.gene08906.t1;Parent=MS.gene08906.t1 |
| chr4.4 | exon | 16814730 | 16816004 | 16814730 | ID=MS.gene08906.t1.exon2;Parent=MS.gene08906.t1 |
| chr4.4 | CDS | 16814730 | 16816004 | 16814730 | ID=cds.MS.gene08906.t1;Parent=MS.gene08906.t1 |
| Gene Sequence |
| Protein sequence |
