Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70368.t1 | AGQ42775.1 | 100 | 344 | 0 | 0 | 1 | 344 | 1 | 344 | 2.30E-162 | 581.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70368.t1 | Q41266 | 92.7 | 248 | 18 | 0 | 97 | 344 | 86 | 333 | 1.3e-137 | 490.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70368.t1 | S5FDW5 | 100.0 | 344 | 0 | 0 | 1 | 344 | 1 | 344 | 1.7e-162 | 581.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene70368 | 0.807706 | 4.43E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene70368 | 0.813889 | 2.04E-51 | -1.69E-46 |
| MS.gene049170 | MS.gene70368 | 0.809619 | 1.73E-50 | -1.69E-46 |
| MS.gene049488 | MS.gene70368 | 0.817149 | 3.83E-52 | -1.69E-46 |
| MS.gene049910 | MS.gene70368 | 0.823957 | 1.05E-53 | -1.69E-46 |
| MS.gene049993 | MS.gene70368 | 0.809789 | 1.59E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene70368 | 0.850677 | 1.46E-60 | -1.69E-46 |
| MS.gene050426 | MS.gene70368 | -0.880675 | 4.52E-70 | -1.69E-46 |
| MS.gene050464 | MS.gene70368 | 0.809212 | 2.12E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene70368 | 0.817023 | 4.09E-52 | -1.69E-46 |
| MS.gene050650 | MS.gene70368 | 0.807341 | 5.30E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene70368 | 0.885958 | 5.19E-72 | -1.69E-46 |
| MS.gene050971 | MS.gene70368 | 0.827589 | 1.44E-54 | -1.69E-46 |
| MS.gene051208 | MS.gene70368 | 0.800218 | 1.60E-48 | -1.69E-46 |
| MS.gene051521 | MS.gene70368 | 0.818309 | 2.10E-52 | -1.69E-46 |
| MS.gene051525 | MS.gene70368 | 0.883475 | 4.35E-71 | -1.69E-46 |
| MS.gene051568 | MS.gene70368 | 0.800964 | 1.13E-48 | -1.69E-46 |
| MS.gene051582 | MS.gene70368 | 0.835331 | 1.79E-56 | -1.69E-46 |
| MS.gene051588 | MS.gene70368 | 0.819827 | 9.47E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene70368 | 0.819531 | 1.11E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene70368 | 0.847721 | 9.67E-60 | -1.69E-46 |
| MS.gene052011 | MS.gene70368 | -0.882294 | 1.18E-70 | -1.69E-46 |
| MS.gene052077 | MS.gene70368 | 0.868613 | 5.73E-66 | -1.69E-46 |
| MS.gene052134 | MS.gene70368 | 0.821469 | 3.97E-53 | -1.69E-46 |
| MS.gene052135 | MS.gene70368 | 0.838353 | 3.02E-57 | -1.69E-46 |
| MS.gene052159 | MS.gene70368 | 0.807791 | 4.25E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene70368 | 0.864683 | 1.02E-64 | -1.69E-46 |
| MS.gene052253 | MS.gene70368 | 0.867623 | 1.19E-65 | -1.69E-46 |
| MS.gene052340 | MS.gene70368 | 0.851706 | 7.45E-61 | -1.69E-46 |
| MS.gene052414 | MS.gene70368 | 0.836284 | 1.02E-56 | -1.69E-46 |
| MS.gene052469 | MS.gene70368 | 0.817941 | 2.54E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene70368 | 0.80895 | 2.41E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene70368 | 0.824755 | 6.80E-54 | -1.69E-46 |
| MS.gene053169 | MS.gene70368 | 0.82387 | 1.10E-53 | -1.69E-46 |
| MS.gene053176 | MS.gene70368 | 0.817046 | 4.04E-52 | -1.69E-46 |
| MS.gene053330 | MS.gene70368 | 0.806953 | 6.40E-50 | -1.69E-46 |
| MS.gene053494 | MS.gene70368 | 0.806883 | 6.63E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene70368 | 0.81869 | 1.72E-52 | -1.69E-46 |
| MS.gene053928 | MS.gene70368 | 0.803524 | 3.35E-49 | -1.69E-46 |
| MS.gene054102 | MS.gene70368 | 0.825306 | 5.04E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene70368 | 0.809922 | 1.49E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene70368 | 0.890876 | 6.63E-74 | -1.69E-46 |
| MS.gene054349 | MS.gene70368 | 0.848108 | 7.56E-60 | -1.69E-46 |
| MS.gene054548 | MS.gene70368 | 0.811867 | 5.65E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene70368 | 0.859171 | 4.97E-63 | -1.69E-46 |
| MS.gene054719 | MS.gene70368 | 0.841128 | 5.73E-58 | -1.69E-46 |
| MS.gene054920 | MS.gene70368 | 0.825551 | 4.41E-54 | -1.69E-46 |
| MS.gene054930 | MS.gene70368 | 0.835894 | 1.29E-56 | -1.69E-46 |
| MS.gene054983 | MS.gene70368 | 0.81761 | 3.02E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene70368 | 0.840173 | 1.02E-57 | -1.69E-46 |
| MS.gene055217 | MS.gene70368 | 0.800641 | 1.31E-48 | -1.69E-46 |
| MS.gene055369 | MS.gene70368 | 0.848619 | 5.46E-60 | -1.69E-46 |
| MS.gene055539 | MS.gene70368 | 0.862538 | 4.72E-64 | -1.69E-46 |
| MS.gene05553 | MS.gene70368 | 0.901387 | 2.82E-78 | -1.69E-46 |
| MS.gene05556 | MS.gene70368 | 0.850281 | 1.88E-60 | -1.69E-46 |
| MS.gene05569 | MS.gene70368 | 0.805463 | 1.32E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene70368 | 0.814959 | 1.18E-51 | -1.69E-46 |
| MS.gene055744 | MS.gene70368 | 0.830471 | 2.88E-55 | -1.69E-46 |
| MS.gene05594 | MS.gene70368 | 0.804658 | 1.94E-49 | -1.69E-46 |
| MS.gene056233 | MS.gene70368 | 0.832214 | 1.07E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene70368 | 0.825772 | 3.91E-54 | -1.69E-46 |
| MS.gene056514 | MS.gene70368 | 0.850026 | 2.22E-60 | -1.69E-46 |
| MS.gene056659 | MS.gene70368 | 0.865362 | 6.24E-65 | -1.69E-46 |
| MS.gene056723 | MS.gene70368 | 0.87881 | 2.08E-69 | -1.69E-46 |
| MS.gene056899 | MS.gene70368 | -0.835123 | 2.02E-56 | -1.69E-46 |
| MS.gene056979 | MS.gene70368 | 0.837382 | 5.37E-57 | -1.69E-46 |
| MS.gene057124 | MS.gene70368 | 0.848185 | 7.20E-60 | -1.69E-46 |
| MS.gene057396 | MS.gene70368 | 0.852593 | 4.17E-61 | -1.69E-46 |
| MS.gene057448 | MS.gene70368 | 0.804561 | 2.04E-49 | -1.69E-46 |
| MS.gene057476 | MS.gene70368 | 0.833273 | 5.86E-56 | -1.69E-46 |
| MS.gene057749 | MS.gene70368 | 0.847783 | 9.29E-60 | -1.69E-46 |
| MS.gene057823 | MS.gene70368 | 0.845523 | 3.85E-59 | -1.69E-46 |
| MS.gene057825 | MS.gene70368 | 0.827627 | 1.41E-54 | -1.69E-46 |
| MS.gene057833 | MS.gene70368 | 0.806936 | 6.46E-50 | -1.69E-46 |
| MS.gene057888 | MS.gene70368 | 0.804904 | 1.73E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene70368 | 0.813078 | 3.07E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene70368 | 0.850862 | 1.29E-60 | -1.69E-46 |
| MS.gene058142 | MS.gene70368 | 0.839636 | 1.41E-57 | -1.69E-46 |
| MS.gene058376 | MS.gene70368 | 0.822467 | 2.33E-53 | -1.69E-46 |
| MS.gene058444 | MS.gene70368 | 0.852757 | 3.74E-61 | -1.69E-46 |
| MS.gene058700 | MS.gene70368 | 0.870081 | 1.91E-66 | -1.69E-46 |
| MS.gene058710 | MS.gene70368 | 0.849404 | 3.31E-60 | -1.69E-46 |
| MS.gene05886 | MS.gene70368 | 0.834535 | 2.83E-56 | -1.69E-46 |
| MS.gene058928 | MS.gene70368 | 0.80785 | 4.13E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene70368 | 0.809184 | 2.14E-50 | -1.69E-46 |
| MS.gene058949 | MS.gene70368 | 0.820926 | 5.30E-53 | -1.69E-46 |
| MS.gene059011 | MS.gene70368 | 0.843253 | 1.57E-58 | -1.69E-46 |
| MS.gene05907 | MS.gene70368 | 0.827576 | 1.45E-54 | -1.69E-46 |
| MS.gene059082 | MS.gene70368 | 0.833051 | 6.66E-56 | -1.69E-46 |
| MS.gene059247 | MS.gene70368 | 0.818728 | 1.68E-52 | -1.69E-46 |
| MS.gene059285 | MS.gene70368 | 0.851775 | 7.12E-61 | -1.69E-46 |
| MS.gene059420 | MS.gene70368 | 0.897766 | 1.02E-76 | -1.69E-46 |
| MS.gene059462 | MS.gene70368 | 0.844253 | 8.48E-59 | -1.69E-46 |
| MS.gene059688 | MS.gene70368 | 0.82851 | 8.64E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene70368 | 0.813526 | 2.45E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene70368 | 0.817068 | 3.99E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene70368 | 0.825824 | 3.80E-54 | -1.69E-46 |
| MS.gene059868 | MS.gene70368 | 0.832416 | 9.57E-56 | -1.69E-46 |
| MS.gene059876 | MS.gene70368 | 0.816742 | 4.73E-52 | -1.69E-46 |
| MS.gene059946 | MS.gene70368 | 0.804547 | 2.05E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene70368 | 0.818564 | 1.84E-52 | -1.69E-46 |
| MS.gene060247 | MS.gene70368 | 0.851644 | 7.76E-61 | -1.69E-46 |
| MS.gene060403 | MS.gene70368 | 0.833734 | 4.50E-56 | -1.69E-46 |
| MS.gene060407 | MS.gene70368 | 0.801101 | 1.06E-48 | -1.69E-46 |
| MS.gene060986 | MS.gene70368 | 0.807566 | 4.75E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene70368 | 0.832822 | 7.59E-56 | -1.69E-46 |
| MS.gene061114 | MS.gene70368 | -0.822437 | 2.37E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene70368 | 0.843244 | 1.58E-58 | -1.69E-46 |
| MS.gene061159 | MS.gene70368 | 0.829166 | 5.99E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene70368 | MS.gene028102 | PPI |
| MS.gene84998 | MS.gene70368 | PPI |
| MS.gene83481 | MS.gene70368 | PPI |
| MS.gene72816 | MS.gene70368 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70368.t1 | MTR_4g094222 | 98.551 | 345 | 4 | 1 | 1 | 344 | 1 | 345 | 0.0 | 708 |
| MS.gene70368.t1 | MTR_5g070680 | 66.279 | 344 | 95 | 3 | 1 | 344 | 1 | 323 | 3.78e-167 | 469 |
| MS.gene70368.t1 | MTR_5g070870 | 70.755 | 318 | 76 | 4 | 29 | 344 | 22 | 324 | 3.00e-159 | 449 |
| MS.gene70368.t1 | MTR_5g026620 | 68.459 | 279 | 86 | 1 | 68 | 344 | 52 | 330 | 1.05e-149 | 425 |
| MS.gene70368.t1 | MTR_5g026620 | 76.991 | 226 | 52 | 0 | 119 | 344 | 37 | 262 | 2.42e-135 | 385 |
| MS.gene70368.t1 | MTR_2g025140 | 26.667 | 180 | 111 | 3 | 158 | 317 | 109 | 287 | 5.21e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70368.t1 | AT5G64210 | 77.500 | 280 | 59 | 2 | 67 | 344 | 76 | 353 | 8.33e-165 | 464 |
| MS.gene70368.t1 | AT3G22370 | 69.231 | 286 | 79 | 1 | 68 | 344 | 69 | 354 | 9.71e-155 | 438 |
| MS.gene70368.t1 | AT3G22360 | 67.616 | 281 | 91 | 0 | 64 | 344 | 45 | 325 | 7.91e-149 | 422 |
| MS.gene70368.t1 | AT3G27620 | 70.342 | 263 | 78 | 0 | 82 | 344 | 67 | 329 | 2.57e-146 | 416 |
| MS.gene70368.t1 | AT1G32350 | 68.045 | 266 | 85 | 0 | 79 | 344 | 53 | 318 | 3.21e-144 | 410 |
| MS.gene70368.t1 | AT1G32350 | 68.016 | 247 | 79 | 0 | 79 | 325 | 53 | 299 | 1.93e-132 | 380 |
| MS.gene70368.t1 | AT4G22260 | 30.000 | 180 | 105 | 3 | 158 | 317 | 121 | 299 | 7.73e-16 | 78.2 |
Find 103 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTATGACATCTTTCAATT+TGG | 0.225219 | 4.3:+20301575 | None:intergenic |
| ACGTGGTTGTGTCGAGTTAT+TGG | 0.242663 | 4.3:-20302779 | MS.gene70368:CDS |
| TTCTGGATAAAGTCGCTTAC+AGG | 0.257073 | 4.3:-20302516 | MS.gene70368:CDS |
| AGCTCCTCTTGGTTATCATT+AGG | 0.258014 | 4.3:-20299892 | None:intergenic |
| ATCTTTCAATTTGGCATCCT+TGG | 0.265673 | 4.3:+20301584 | None:intergenic |
| CGTGGTTGTGTCGAGTTATT+GGG | 0.294734 | 4.3:-20302778 | MS.gene70368:CDS |
| AACTTTGACGGTTAGAATTC+CGG | 0.295362 | 4.3:+20303000 | None:intergenic |
| GCTCCTCTTGGTTATCATTA+GGG | 0.299342 | 4.3:-20299891 | None:intergenic |
| GAAATGGTATGAGAGATTTC+TGG | 0.357389 | 4.3:-20301802 | MS.gene70368:CDS |
| AGAAATCTCTCATACCATTT+CGG | 0.371303 | 4.3:+20301804 | None:intergenic |
| CAAGTTCTACCATAGTCATT+AGG | 0.381374 | 4.3:+20301832 | None:intergenic |
| GAGAAGAAGGAGGAGAGTTC+CGG | 0.382377 | 4.3:-20302813 | MS.gene70368:CDS |
| CAACTCTATGAGCCACCTTT+GGG | 0.383053 | 4.3:+20301724 | None:intergenic |
| ACAACTCTATGAGCCACCTT+TGG | 0.383957 | 4.3:+20301723 | None:intergenic |
| AGCATCCCTCCAACCATTCC+AGG | 0.387944 | 4.3:+20301942 | None:intergenic |
| CTGCCATTGCAATAGACTAT+TGG | 0.388788 | 4.3:-20301614 | MS.gene70368:CDS |
| AGGATGGAACAGAGTGGCCT+TGG | 0.398321 | 4.3:-20302728 | MS.gene70368:CDS |
| AATGTATAGCTTCTTCTTCA+AGG | 0.401405 | 4.3:+20301694 | None:intergenic |
| CTCTACGCGGATGGCGGAAA+CGG | 0.404670 | 4.3:-20302930 | MS.gene70368:CDS |
| ATTTCTGGTTCTTGCTGTAC+AGG | 0.408480 | 4.3:-20301787 | MS.gene70368:CDS |
| TCACAACCGCCGAACTTTGA+CGG | 0.414769 | 4.3:+20302988 | None:intergenic |
| TTCCTACACTGAGTATTTGA+AGG | 0.429843 | 4.3:-20301673 | MS.gene70368:CDS |
| TCATTCGCGGCGGCGGAAAT+CGG | 0.438546 | 4.3:-20302963 | MS.gene70368:CDS |
| GAAACAGTTGCAGCTGTCCC+TGG | 0.444443 | 4.3:-20301960 | MS.gene70368:CDS |
| AACCACGTTATTCTTTGTTC+CGG | 0.444667 | 4.3:+20302794 | None:intergenic |
| TCTTTCAATTTGGCATCCTT+GGG | 0.445531 | 4.3:+20301585 | None:intergenic |
| CGCTGATGAGGCTCACCATC+GGG | 0.449836 | 4.3:-20301544 | MS.gene70368:CDS |
| CCATCCTCTCTCATAATCTT+CGG | 0.453617 | 4.3:+20302744 | None:intergenic |
| AAGGTGGCTCATAGAGTTGT+TGG | 0.454036 | 4.3:-20301720 | MS.gene70368:CDS |
| ATGATGCTTATTCAGATCAA+TGG | 0.454262 | 4.3:+20302552 | None:intergenic |
| GCCTCCGTCTCTTCCGCTGA+TGG | 0.455263 | 4.3:+20302855 | None:intergenic |
| GTGGCCTTGGAACTGCTTCA+TGG | 0.462385 | 4.3:-20302715 | MS.gene70368:intron |
| GAGGATGCACCTAATGACTA+TGG | 0.466754 | 4.3:-20301841 | MS.gene70368:CDS |
| GAATTCTAACCGTCAAAGTT+CGG | 0.475373 | 4.3:-20302997 | MS.gene70368:CDS |
| ATTTCAGCATAGTGGTGGTT+GGG | 0.477652 | 4.3:-20301895 | MS.gene70368:CDS |
| GCAGTTCTTTACCGTGGAAG+TGG | 0.484800 | 4.3:+20299925 | None:intergenic |
| TAGAACTTGTGAAGCCGAAA+TGG | 0.485630 | 4.3:-20301818 | MS.gene70368:CDS |
| GCATTCAGCATTGTGTTACA+TGG | 0.485894 | 4.3:-20303045 | MS.gene70368:CDS |
| TGTGAGGTCATTCGCGGCGG+CGG | 0.486795 | 4.3:-20302970 | MS.gene70368:CDS |
| CCATTGCAATAGACTATTGG+AGG | 0.495126 | 4.3:-20301611 | MS.gene70368:CDS |
| ACTTTATCCAGAAAATTCTT+CGG | 0.501906 | 4.3:+20302526 | None:intergenic |
| AATTTCAGCATAGTGGTGGT+TGG | 0.511730 | 4.3:-20301896 | MS.gene70368:CDS |
| GCTGTCCCTGGAATGGTTGG+AGG | 0.515427 | 4.3:-20301948 | MS.gene70368:CDS |
| TCTATTGCAATGGCAGGAGC+AGG | 0.517572 | 4.3:+20301621 | None:intergenic |
| CGGGACGCACCAGCTCCTCT+TGG | 0.517676 | 4.3:-20299903 | MS.gene70368:CDS |
| CAATAGTCTATTGCAATGGC+AGG | 0.522929 | 4.3:+20301615 | None:intergenic |
| GCCGAGCTTTGATCGGTGGC+CGG | 0.523135 | 4.3:-20303019 | MS.gene70368:CDS |
| TTTCTGGTTCTTGCTGTACA+GGG | 0.524259 | 4.3:-20301786 | MS.gene70368:CDS |
| GGCGGTTGTGAGGTCATTCG+CGG | 0.528832 | 4.3:-20302976 | MS.gene70368:CDS |
| GACGGAGAAGAACGAGAAGA+AGG | 0.529053 | 4.3:-20302826 | MS.gene70368:CDS |
| TAATGATAACCAAGAGGAGC+TGG | 0.534076 | 4.3:+20299894 | None:intergenic |
| CCGAAGATTATGAGAGAGGA+TGG | 0.536815 | 4.3:-20302744 | MS.gene70368:CDS |
| AGGTGGCTCATAGAGTTGTT+GGG | 0.545630 | 4.3:-20301719 | MS.gene70368:CDS |
| TCCGGCCACCGATCAAAGCT+CGG | 0.550176 | 4.3:+20303018 | None:intergenic |
| ATGGCTCGCCGAGCTTTGAT+CGG | 0.558446 | 4.3:-20303026 | MS.gene70368:CDS |
| TACGCGGATGGCGGAAACGG+AGG | 0.560225 | 4.3:-20302927 | MS.gene70368:CDS |
| AACAGTCATTCGCGCTGATG+AGG | 0.563488 | 4.3:-20301556 | MS.gene70368:CDS |
| CTTCCACGGTAAAGAACTGC+GGG | 0.566723 | 4.3:-20299922 | MS.gene70368:CDS |
| CAGAGGCATCTCTACGCGGA+TGG | 0.568416 | 4.3:-20302939 | MS.gene70368:CDS |
| GTGGTTGTGTCGAGTTATTG+GGG | 0.571030 | 4.3:-20302777 | MS.gene70368:CDS |
| GCAGCTGTCCCTGGAATGGT+TGG | 0.572427 | 4.3:-20301951 | MS.gene70368:CDS |
| TTGAAGAAGCAGAGAATGAG+AGG | 0.575067 | 4.3:-20301860 | MS.gene70368:CDS |
| ACGCGGATGGCGGAAACGGA+GGG | 0.575871 | 4.3:-20302926 | MS.gene70368:CDS |
| TCTTCCGCTGATGGCTTCGA+CGG | 0.586594 | 4.3:+20302864 | None:intergenic |
| GCCATCAGCGGAAGAGACGG+AGG | 0.587726 | 4.3:-20302856 | MS.gene70368:CDS |
| TATTTGAAGGACATTGATAG+TGG | 0.587742 | 4.3:-20301660 | MS.gene70368:CDS |
| TTTGATTGATAAGTCTCCCA+TGG | 0.588432 | 4.3:+20302580 | None:intergenic |
| GAAGCCATCAGCGGAAGAGA+CGG | 0.589166 | 4.3:-20302859 | MS.gene70368:CDS |
| GCGCTGATGAGGCTCACCAT+CGG | 0.590135 | 4.3:-20301545 | MS.gene70368:CDS |
| CGAAAATTTCAGCATAGTGG+TGG | 0.590958 | 4.3:-20301900 | MS.gene70368:CDS |
| CTGTTTCGAGCATCATTGCA+CGG | 0.591594 | 4.3:+20301976 | None:intergenic |
| GTCAAAGTTCGGCGGTTGTG+AGG | 0.592006 | 4.3:-20302986 | MS.gene70368:CDS |
| TTACATACTTTCCCCAAAGG+TGG | 0.592089 | 4.3:-20301736 | MS.gene70368:CDS |
| CTGTCCCTGGAATGGTTGGA+GGG | 0.593126 | 4.3:-20301947 | MS.gene70368:CDS |
| CTCCGAAAATTTCAGCATAG+TGG | 0.594257 | 4.3:-20301903 | MS.gene70368:CDS |
| CGGCGGCGGAAATCGGCCAG+AGG | 0.595135 | 4.3:-20302956 | MS.gene70368:CDS |
| AACTCTATGAGCCACCTTTG+GGG | 0.595501 | 4.3:+20301725 | None:intergenic |
| ACTTTACATACTTTCCCCAA+AGG | 0.601341 | 4.3:-20301739 | MS.gene70368:CDS |
| CATCCGCGTAGAGATGCCTC+TGG | 0.604415 | 4.3:+20302940 | None:intergenic |
| AGGCATCTCTACGCGGATGG+CGG | 0.604949 | 4.3:-20302936 | MS.gene70368:CDS |
| AGAGACGGAGGCGAAATCGA+CGG | 0.606512 | 4.3:-20302844 | MS.gene70368:CDS |
| GAGGCCGAAGATTATGAGAG+AGG | 0.612635 | 4.3:-20302748 | MS.gene70368:CDS |
| TGCGCCGTCGAAGCCATCAG+CGG | 0.613702 | 4.3:-20302868 | MS.gene70368:CDS |
| GGAGAAGAACGAGAAGAAGG+AGG | 0.617945 | 4.3:-20302823 | MS.gene70368:CDS |
| GTTACCATGAAGCAGTTCCA+AGG | 0.624690 | 4.3:+20302711 | None:intergenic |
| GCTCGCCGAGCTTTGATCGG+TGG | 0.625356 | 4.3:-20303023 | MS.gene70368:CDS |
| AGTTGCAGCTGTCCCTGGAA+TGG | 0.626357 | 4.3:-20301955 | MS.gene70368:CDS |
| AGACTATTGGAGGCTTCCCA+AGG | 0.628882 | 4.3:-20301601 | MS.gene70368:CDS |
| ATGCAGGATATCCACTTCCA+CGG | 0.632703 | 4.3:-20299936 | MS.gene70368:intron |
| GCATCCCTCCAACCATTCCA+GGG | 0.636143 | 4.3:+20301943 | None:intergenic |
| GAACACTCACTGAAGCGAAG+TGG | 0.637444 | 4.3:+20301514 | None:intergenic |
| GTCCTTCAAATACTCAGTGT+AGG | 0.637701 | 4.3:+20301671 | None:intergenic |
| CGTCCCGCAGTTCTTTACCG+TGG | 0.639191 | 4.3:+20299919 | None:intergenic |
| CCTCCAATAGTCTATTGCAA+TGG | 0.640373 | 4.3:+20301611 | None:intergenic |
| TTCTAACCGTCAAAGTTCGG+CGG | 0.651224 | 4.3:-20302994 | MS.gene70368:CDS |
| TGGTTGTGTCGAGTTATTGG+GGG | 0.651952 | 4.3:-20302776 | MS.gene70368:CDS |
| CGAAGTGGTTCACATCCCGA+TGG | 0.653019 | 4.3:+20301529 | None:intergenic |
| AAGCCCTAATGATAACCAAG+AGG | 0.665170 | 4.3:+20299888 | None:intergenic |
| CGGCCAGAGGCATCTCTACG+CGG | 0.700025 | 4.3:-20302943 | MS.gene70368:CDS |
| ACTTCCACGGTAAAGAACTG+CGG | 0.706975 | 4.3:-20299923 | MS.gene70368:CDS |
| GGTTGTGAGGTCATTCGCGG+CGG | 0.720769 | 4.3:-20302973 | MS.gene70368:CDS |
| TGAGAGAGGATGGAACAGAG+TGG | 0.750950 | 4.3:-20302734 | MS.gene70368:CDS |
| TTCCGGAACAAAGAATAACG+TGG | 0.755903 | 4.3:-20302796 | MS.gene70368:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCATCTTACATTTATTTA+CGG | - | chr4.3:20301510-20301529 | MS.gene70368:intron | 15.0% |
| !!! | TAATTTAGTCAATTTTTTAC+CGG | - | chr4.3:20300617-20300636 | MS.gene70368:intron | 15.0% |
| !!! | TCATAGTTGTTTTAAAATAA+AGG | - | chr4.3:20302857-20302876 | MS.gene70368:CDS | 15.0% |
| !! | ACATGAAAACTGTAAAATTT+AGG | - | chr4.3:20301619-20301638 | MS.gene70368:CDS | 20.0% |
| !! | ATAAATGTAAGATGATATGT+TGG | + | chr4.3:20301507-20301526 | None:intergenic | 20.0% |
| !! | GGAATTGTATTATAAAAACA+GGG | + | chr4.3:20302979-20302998 | None:intergenic | 20.0% |
| !! | TTTGCTACATATGAATAAAA+GGG | - | chr4.3:20300705-20300724 | MS.gene70368:intron | 20.0% |
| !!! | AAAACTGTAAAATTTAGGAT+TGG | - | chr4.3:20301624-20301643 | MS.gene70368:CDS | 20.0% |
| !!! | AATTATTTTAAGTGATGTTG+TGG | - | chr4.3:20302390-20302409 | MS.gene70368:intron | 20.0% |
| !!! | GTCATATTTTATTTTATTCC+TGG | - | chr4.3:20300770-20300789 | MS.gene70368:intron | 20.0% |
| !!! | TAAAATTTAGGATTGGTATA+AGG | - | chr4.3:20301631-20301650 | MS.gene70368:CDS | 20.0% |
| !!! | TTACTTATATCCAACTTTTA+GGG | - | chr4.3:20301883-20301902 | MS.gene70368:CDS | 20.0% |
| !!! | TTTACTTATATCCAACTTTT+AGG | - | chr4.3:20301882-20301901 | MS.gene70368:CDS | 20.0% |
| !!! | TTTCTTTTTCATAATAATGC+TGG | - | chr4.3:20302931-20302950 | MS.gene70368:CDS | 20.0% |
| ! | AAAAAAAATTGTAACCACCT+TGG | - | chr4.3:20302720-20302739 | MS.gene70368:CDS | 25.0% |
| ! | AACTTGTGATCTCAATATAT+TGG | - | chr4.3:20301572-20301591 | MS.gene70368:CDS | 25.0% |
| ! | ACTTTATCCAGAAAATTCTT+CGG | + | chr4.3:20300420-20300439 | None:intergenic | 25.0% |
| ! | AGAACTTAGTTTAAAGAAAG+TGG | - | chr4.3:20302830-20302849 | MS.gene70368:CDS | 25.0% |
| ! | ATAAGTAAAGCTTCATTGTT+TGG | + | chr4.3:20301871-20301890 | None:intergenic | 25.0% |
| ! | ATTGACTAAATTACATGTGT+CGG | + | chr4.3:20300610-20300629 | None:intergenic | 25.0% |
| ! | ATTGTATGATCCATAACAAA+AGG | - | chr4.3:20300531-20300550 | MS.gene70368:intron | 25.0% |
| ! | CGGAATTGTATTATAAAAAC+AGG | + | chr4.3:20302980-20302999 | None:intergenic | 25.0% |
| ! | GTATAAGGTAATATACACAA+AGG | - | chr4.3:20301646-20301665 | MS.gene70368:CDS | 25.0% |
| ! | TAAGTAAAGCTTCATTGTTT+GGG | + | chr4.3:20301870-20301889 | None:intergenic | 25.0% |
| ! | TGTTATGACATCTTTCAATT+TGG | + | chr4.3:20301371-20301390 | None:intergenic | 25.0% |
| ! | TTTATGTGCTCTTAAGAAAT+TGG | - | chr4.3:20300737-20300756 | MS.gene70368:intron | 25.0% |
| !! | GTTTGCTACATATGAATAAA+AGG | - | chr4.3:20300704-20300723 | MS.gene70368:intron | 25.0% |
| !! | TGTAGTGCTTAATTATGTTT+TGG | - | chr4.3:20302472-20302491 | MS.gene70368:intron | 25.0% |
| !! | TTTGTTATGGATCATACAAT+AGG | + | chr4.3:20300531-20300550 | None:intergenic | 25.0% |
| !!! | ATTGTTTTTTCGCTAATTCA+CGG | - | chr4.3:20300287-20300306 | MS.gene70368:intron | 25.0% |
| !!! | GTAAGAAATTTTAACCACTT+GGG | - | chr4.3:20301908-20301927 | MS.gene70368:CDS | 25.0% |
| !!! | TTTTGTTATGATGTTCTTCA+TGG | - | chr4.3:20300885-20300904 | MS.gene70368:intron | 25.0% |
| AATGTATAGCTTCTTCTTCA+AGG | + | chr4.3:20301252-20301271 | None:intergenic | 30.0% | |
| AATTCACGGTTTCTATAAAG+TGG | - | chr4.3:20300301-20300320 | MS.gene70368:intron | 30.0% | |
| ACCTTAAAAAACACATCAGT+GGG | + | chr4.3:20300474-20300493 | None:intergenic | 30.0% | |
| AGAAATCTCTCATACCATTT+CGG | + | chr4.3:20301142-20301161 | None:intergenic | 30.0% | |
| AGCATAAAACATAGCAATAC+TGG | + | chr4.3:20302809-20302828 | None:intergenic | 30.0% | |
| ATAACATCACAATTCGATCT+TGG | + | chr4.3:20302565-20302584 | None:intergenic | 30.0% | |
| ATAACGAACATGCTAAATTC+AGG | + | chr4.3:20302886-20302905 | None:intergenic | 30.0% | |
| ATGATGCTTATTCAGATCAA+TGG | + | chr4.3:20300394-20300413 | None:intergenic | 30.0% | |
| ATTCCAAATAACAGTGCAAA+AGG | - | chr4.3:20302064-20302083 | MS.gene70368:intron | 30.0% | |
| CATACTATACTAGATATTGC+AGG | - | chr4.3:20300850-20300869 | MS.gene70368:intron | 30.0% | |
| GTTGCTATACACTTTACAAA+GGG | - | chr4.3:20301755-20301774 | MS.gene70368:CDS | 30.0% | |
| TAAGTATATGTCATCTTCCA+AGG | + | chr4.3:20302740-20302759 | None:intergenic | 30.0% | |
| TATCAATGATGCATATTTCC+AGG | + | chr4.3:20300791-20300810 | None:intergenic | 30.0% | |
| TATTTGAAGGACATTGATAG+TGG | - | chr4.3:20301283-20301302 | MS.gene70368:intron | 30.0% | |
| TGTAATCTTAGGAAAGTAGT+GGG | - | chr4.3:20302292-20302311 | MS.gene70368:intron | 30.0% | |
| TGTTGCTATACACTTTACAA+AGG | - | chr4.3:20301754-20301773 | MS.gene70368:CDS | 30.0% | |
| TTGTAATCTTAGGAAAGTAG+TGG | - | chr4.3:20302291-20302310 | MS.gene70368:intron | 30.0% | |
| ! | AACGTCTCTGAAAATATTCA+TGG | + | chr4.3:20300940-20300959 | None:intergenic | 30.0% |
| ! | AGAAGTATATGACTACCATA+AGG | - | chr4.3:20301782-20301801 | MS.gene70368:CDS | 30.0% |
| ! | GAATATTTTCAGAGACGTTA+TGG | - | chr4.3:20300941-20300960 | MS.gene70368:intron | 30.0% |
| ! | TCTTCTCTTTCCTTTTGTTA+TGG | + | chr4.3:20300544-20300563 | None:intergenic | 30.0% |
| !! | ATTTTAAGTGATGTTGTGGA+TGG | - | chr4.3:20302394-20302413 | MS.gene70368:intron | 30.0% |
| !! | GAGTAGTTTCTGTTTTATTG+TGG | - | chr4.3:20302532-20302551 | MS.gene70368:CDS | 30.0% |
| !! | GGTAAGAAATTTTAACCACT+TGG | - | chr4.3:20301907-20301926 | MS.gene70368:CDS | 30.0% |
| !! | TATTGCAGTACACCTTATTT+TGG | - | chr4.3:20302606-20302625 | MS.gene70368:intron | 30.0% |
| !! | TTTTAAGTGATGTTGTGGAT+GGG | - | chr4.3:20302395-20302414 | MS.gene70368:intron | 30.0% |
| !!! | ATTGCAGTACACCTTATTTT+GGG | - | chr4.3:20302607-20302626 | MS.gene70368:intron | 30.0% |
| !!! | GTGCTTTGATTTGTTCTTTT+AGG | - | chr4.3:20302777-20302796 | MS.gene70368:CDS | 30.0% |
| !!! | GTTATGCATTAGTTTTCGTT+TGG | - | chr4.3:20302580-20302599 | MS.gene70368:CDS | 30.0% |
| AACCACGTTATTCTTTGTTC+CGG | + | chr4.3:20300152-20300171 | None:intergenic | 35.0% | |
| AACTTTGACGGTTAGAATTC+CGG | + | chr4.3:20299946-20299965 | None:intergenic | 35.0% | |
| AAGTGCATGAGAGGAAATTA+GGG | + | chr4.3:20301705-20301724 | None:intergenic | 35.0% | |
| ACACTACACTTTCGAATTCT+AGG | + | chr4.3:20301728-20301747 | None:intergenic | 35.0% | |
| ACTGCATCTTCTTAGAATCT+GGG | + | chr4.3:20302361-20302380 | None:intergenic | 35.0% | |
| ACTTTACATACTTTCCCCAA+AGG | - | chr4.3:20301204-20301223 | MS.gene70368:intron | 35.0% | |
| ATCTTCTTAGAATCTGGGTT+TGG | + | chr4.3:20302356-20302375 | None:intergenic | 35.0% | |
| ATCTTTCAATTTGGCATCCT+TGG | + | chr4.3:20301362-20301381 | None:intergenic | 35.0% | |
| ATTGAGATCACAAGTTCAAC+AGG | + | chr4.3:20301568-20301587 | None:intergenic | 35.0% | |
| CAAGTTCTACCATAGTCATT+AGG | + | chr4.3:20301114-20301133 | None:intergenic | 35.0% | |
| CACCTTAAAAAACACATCAG+TGG | + | chr4.3:20300475-20300494 | None:intergenic | 35.0% | |
| GAAATGGTATGAGAGATTTC+TGG | - | chr4.3:20301141-20301160 | MS.gene70368:intron | 35.0% | |
| GAATTCTAACCGTCAAAGTT+CGG | - | chr4.3:20299946-20299965 | MS.gene70368:intron | 35.0% | |
| GACAACAAATGTATGCCTTA+TGG | + | chr4.3:20301800-20301819 | None:intergenic | 35.0% | |
| GAGATCCAATACCCAAAATA+AGG | + | chr4.3:20302621-20302640 | None:intergenic | 35.0% | |
| GTAATCTTAGGAAAGTAGTG+GGG | - | chr4.3:20302293-20302312 | MS.gene70368:intron | 35.0% | |
| TAATCTTAGGAAAGTAGTGG+GGG | - | chr4.3:20302294-20302313 | MS.gene70368:intron | 35.0% | |
| TCTTTCAATTTGGCATCCTT+GGG | + | chr4.3:20301361-20301380 | None:intergenic | 35.0% | |
| TTCATAATAATGCTGGCCAT+TGG | - | chr4.3:20302938-20302957 | MS.gene70368:CDS | 35.0% | |
| TTCCTACACTGAGTATTTGA+AGG | - | chr4.3:20301270-20301289 | MS.gene70368:intron | 35.0% | |
| TTTAAGTGATGTTGTGGATG+GGG | - | chr4.3:20302396-20302415 | MS.gene70368:intron | 35.0% | |
| TTTCTTACCTCCCTAAAAGT+TGG | + | chr4.3:20301896-20301915 | None:intergenic | 35.0% | |
| TTTGATTGATAAGTCTCCCA+TGG | + | chr4.3:20300366-20300385 | None:intergenic | 35.0% | |
| ! | AAATTACATGTGTCGGTGTA+AGG | + | chr4.3:20300603-20300622 | None:intergenic | 35.0% |
| ! | AGAATTCGAAAGTGTAGTGT+AGG | - | chr4.3:20301728-20301747 | MS.gene70368:CDS | 35.0% |
| ! | CACCACTATGCTGAAATTTT+CGG | + | chr4.3:20301045-20301064 | None:intergenic | 35.0% |
| ! | CATCCTTTTGCACTGTTATT+TGG | + | chr4.3:20302070-20302089 | None:intergenic | 35.0% |
| !! | AAGGGAGTGATATGTCATTT+TGG | - | chr4.3:20301988-20302007 | MS.gene70368:CDS | 35.0% |
| !! | AGAAATTTTAACCACTTGGG+AGG | - | chr4.3:20301911-20301930 | MS.gene70368:CDS | 35.0% |
| !! | CTTATATCCAACTTTTAGGG+AGG | - | chr4.3:20301886-20301905 | MS.gene70368:CDS | 35.0% |
| !!! | GATGTGTTTTTTAAGGTGTG+TGG | - | chr4.3:20300477-20300496 | MS.gene70368:intron | 35.0% |
| !!! | GTACACCTTATTTTGGGTAT+TGG | - | chr4.3:20302613-20302632 | MS.gene70368:intron | 35.0% |
| !!! | TCCCACTGATGTGTTTTTTA+AGG | - | chr4.3:20300470-20300489 | MS.gene70368:intron | 35.0% |
| AATTAGGGGAAAATGCGATC+TGG | + | chr4.3:20301690-20301709 | None:intergenic | 40.0% | |
| AATTTCAGCATAGTGGTGGT+TGG | - | chr4.3:20301047-20301066 | MS.gene70368:intron | 40.0% | |
| ACGAACATGCTAAATTCAGG+TGG | + | chr4.3:20302883-20302902 | None:intergenic | 40.0% | |
| AGTGCAAAAGGATGCTAATG+TGG | - | chr4.3:20302076-20302095 | MS.gene70368:intron | 40.0% | |
| AGTGCATGAGAGGAAATTAG+GGG | + | chr4.3:20301704-20301723 | None:intergenic | 40.0% | |
| ATCAACCGTGAGAACTTCAA+GGG | - | chr4.3:20302201-20302220 | MS.gene70368:intron | 40.0% | |
| ATTTCAGCATAGTGGTGGTT+GGG | - | chr4.3:20301048-20301067 | MS.gene70368:intron | 40.0% | |
| CAAGAAACAGCCACTGATAT+CGG | + | chr4.3:20302509-20302528 | None:intergenic | 40.0% | |
| CAATAGTCTATTGCAATGGC+AGG | + | chr4.3:20301331-20301350 | None:intergenic | 40.0% | |
| CAATTTGATGCCGATATCAG+TGG | - | chr4.3:20302496-20302515 | MS.gene70368:CDS | 40.0% | |
| CACTGATATCGGCATCAAAT+TGG | + | chr4.3:20302498-20302517 | None:intergenic | 40.0% | |
| CACTGCATCTTCTTAGAATC+TGG | + | chr4.3:20302362-20302381 | None:intergenic | 40.0% | |
| CCATCCTCTCTCATAATCTT+CGG | + | chr4.3:20300202-20300221 | None:intergenic | 40.0% | |
| CCATTGCAATAGACTATTGG+AGG | - | chr4.3:20301332-20301351 | MS.gene70368:intron | 40.0% | |
| CCTCCAATAGTCTATTGCAA+TGG | + | chr4.3:20301335-20301354 | None:intergenic | 40.0% | |
| CGAAAATTTCAGCATAGTGG+TGG | - | chr4.3:20301043-20301062 | MS.gene70368:intron | 40.0% | |
| CTCCGAAAATTTCAGCATAG+TGG | - | chr4.3:20301040-20301059 | MS.gene70368:intron | 40.0% | |
| CTGCCATTGCAATAGACTAT+TGG | - | chr4.3:20301329-20301348 | MS.gene70368:intron | 40.0% | |
| GAAGTGCATGAGAGGAAATT+AGG | + | chr4.3:20301706-20301725 | None:intergenic | 40.0% | |
| GAGAAAGTCAATCCATTGGA+AGG | - | chr4.3:20302151-20302170 | MS.gene70368:intron | 40.0% | |
| GCATTCAGCATTGTGTTACA+TGG | - | chr4.3:20299898-20299917 | MS.gene70368:CDS | 40.0% | |
| GCTATACACTTTACAAAGGG+CGG | - | chr4.3:20301758-20301777 | MS.gene70368:CDS | 40.0% | |
| GTATATGTCATCTTCCAAGG+TGG | + | chr4.3:20302737-20302756 | None:intergenic | 40.0% | |
| GTCCTTCAAATACTCAGTGT+AGG | + | chr4.3:20301275-20301294 | None:intergenic | 40.0% | |
| GTGCAAAAGGATGCTAATGT+GGG | - | chr4.3:20302077-20302096 | MS.gene70368:intron | 40.0% | |
| TAATGATAACCAAGAGGAGC+TGG | + | chr4.3:20303052-20303071 | None:intergenic | 40.0% | |
| TAGAACTTGTGAAGCCGAAA+TGG | - | chr4.3:20301125-20301144 | MS.gene70368:intron | 40.0% | |
| TAGAATCTGGGTTTGGACTT+TGG | + | chr4.3:20302349-20302368 | None:intergenic | 40.0% | |
| TGCAAAAGGATGCTAATGTG+GGG | - | chr4.3:20302078-20302097 | MS.gene70368:intron | 40.0% | |
| TTACATACTTTCCCCAAAGG+TGG | - | chr4.3:20301207-20301226 | MS.gene70368:intron | 40.0% | |
| TTCCGGAACAAAGAATAACG+TGG | - | chr4.3:20300147-20300166 | MS.gene70368:intron | 40.0% | |
| TTCTGGATAAAGTCGCTTAC+AGG | - | chr4.3:20300427-20300446 | MS.gene70368:intron | 40.0% | |
| TTGAAGAAGCAGAGAATGAG+AGG | - | chr4.3:20301083-20301102 | MS.gene70368:intron | 40.0% | |
| ! | AATTCTAGGAAGTGCATGAG+AGG | + | chr4.3:20301714-20301733 | None:intergenic | 40.0% |
| ! | GAAATTTTCGGAGTGACTTG+AGG | + | chr4.3:20301033-20301052 | None:intergenic | 40.0% |
| ! | GCTGGTTCTCTTGTAATCTT+AGG | - | chr4.3:20302281-20302300 | MS.gene70368:intron | 40.0% |
| ! | TCATGTGCCGAAGAATTTTC+TGG | - | chr4.3:20300410-20300429 | MS.gene70368:intron | 40.0% |
| ! | TCGTTGTTGATTGTAGCCAT+GGG | - | chr4.3:20300347-20300366 | MS.gene70368:intron | 40.0% |
| ! | TTCGTTGTTGATTGTAGCCA+TGG | - | chr4.3:20300346-20300365 | MS.gene70368:intron | 40.0% |
| !! | ATATCAGTGGCTGTTTCTTG+AGG | - | chr4.3:20302509-20302528 | MS.gene70368:CDS | 40.0% |
| !! | ATTTCTGGTTCTTGCTGTAC+AGG | - | chr4.3:20301156-20301175 | MS.gene70368:intron | 40.0% |
| !! | ATTTTAACCACTTGGGAGGA+CGG | - | chr4.3:20301915-20301934 | MS.gene70368:CDS | 40.0% |
| !! | TATCAGTGGCTGTTTCTTGA+GGG | - | chr4.3:20302510-20302529 | MS.gene70368:CDS | 40.0% |
| !! | TTTCTGGTTCTTGCTGTACA+GGG | - | chr4.3:20301157-20301176 | MS.gene70368:intron | 40.0% |
| !! | TTTGGGTATTGGATCTCGTT+TGG | - | chr4.3:20302624-20302643 | MS.gene70368:intron | 40.0% |
| !!! | GTCATTTTGGAGTGATCCAT+GGG | - | chr4.3:20302001-20302020 | MS.gene70368:intron | 40.0% |
| !!! | TGTCATTTTGGAGTGATCCA+TGG | - | chr4.3:20302000-20302019 | MS.gene70368:intron | 40.0% |
| AACTCTATGAGCCACCTTTG+GGG | + | chr4.3:20301221-20301240 | None:intergenic | 45.0% | |
| AAGGTGGCTCATAGAGTTGT+TGG | - | chr4.3:20301223-20301242 | MS.gene70368:intron | 45.0% | |
| ACAACTCTATGAGCCACCTT+TGG | + | chr4.3:20301223-20301242 | None:intergenic | 45.0% | |
| ACAATTCCGTTCCTTCATGC+AGG | - | chr4.3:20302991-20303010 | MS.gene70368:CDS | 45.0% | |
| ACGTGGTTGTGTCGAGTTAT+TGG | - | chr4.3:20300164-20300183 | MS.gene70368:intron | 45.0% | |
| ACTCAACAGACAAATGGGTC+TGG | - | chr4.3:20302226-20302245 | MS.gene70368:intron | 45.0% | |
| ACTTCCACGGTAAAGAACTG+CGG | - | chr4.3:20303020-20303039 | MS.gene70368:CDS | 45.0% | |
| AGGAGGAGAATTAAACGAGC+TGG | - | chr4.3:20302263-20302282 | MS.gene70368:intron | 45.0% | |
| AGGTGGCTCATAGAGTTGTT+GGG | - | chr4.3:20301224-20301243 | MS.gene70368:intron | 45.0% | |
| AGTAAGTGCAGGGAAGTAGT+GGG | - | chr4.3:20301963-20301982 | MS.gene70368:CDS | 45.0% | |
| AGTACCCCTTGAAGTTCTCA+CGG | + | chr4.3:20302209-20302228 | None:intergenic | 45.0% | |
| ATGCAGGATATCCACTTCCA+CGG | - | chr4.3:20303007-20303026 | MS.gene70368:CDS | 45.0% | |
| CAACTCTATGAGCCACCTTT+GGG | + | chr4.3:20301222-20301241 | None:intergenic | 45.0% | |
| CATTCACCAACTCCTTCCAA+TGG | + | chr4.3:20302166-20302185 | None:intergenic | 45.0% | |
| CCGAAGATTATGAGAGAGGA+TGG | - | chr4.3:20300199-20300218 | MS.gene70368:intron | 45.0% | |
| CGTGGTTGTGTCGAGTTATT+GGG | - | chr4.3:20300165-20300184 | MS.gene70368:intron | 45.0% | |
| CTGTTTCGAGCATCATTGCA+CGG | + | chr4.3:20300970-20300989 | None:intergenic | 45.0% | |
| GAACACCAGTGTGAAACCAA+TGG | + | chr4.3:20302957-20302976 | None:intergenic | 45.0% | |
| GAAGTGGATATCCTGCATGA+AGG | + | chr4.3:20303005-20303024 | None:intergenic | 45.0% | |
| GACACGACACAACATTGACA+CGG | + | chr4.3:20300654-20300673 | None:intergenic | 45.0% | |
| GAGGATGCACCTAATGACTA+TGG | - | chr4.3:20301102-20301121 | MS.gene70368:intron | 45.0% | |
| GATCAACCGTGAGAACTTCA+AGG | - | chr4.3:20302200-20302219 | MS.gene70368:intron | 45.0% | |
| GATGTTGTGGATGGGGTTTA+TGG | - | chr4.3:20302403-20302422 | MS.gene70368:intron | 45.0% | |
| GCAAAAGGATGCTAATGTGG+GGG | - | chr4.3:20302079-20302098 | MS.gene70368:intron | 45.0% | |
| GGAGGAGAAAGTCAATCCAT+TGG | - | chr4.3:20302147-20302166 | MS.gene70368:intron | 45.0% | |
| GGATATCCTGCATGAAGGAA+CGG | + | chr4.3:20303000-20303019 | None:intergenic | 45.0% | |
| GTCAATCCATTGGAAGGAGT+TGG | - | chr4.3:20302157-20302176 | MS.gene70368:intron | 45.0% | |
| GTCGTGTCTAGTGTTCATGT+TGG | - | chr4.3:20300666-20300685 | MS.gene70368:intron | 45.0% | |
| GTGGTTGTGTCGAGTTATTG+GGG | - | chr4.3:20300166-20300185 | MS.gene70368:intron | 45.0% | |
| GTGTGGAACAAGTTCAGAGA+GGG | - | chr4.3:20302106-20302125 | MS.gene70368:intron | 45.0% | |
| GTTACCATGAAGCAGTTCCA+AGG | + | chr4.3:20300235-20300254 | None:intergenic | 45.0% | |
| TAGTAAGTGCAGGGAAGTAG+TGG | - | chr4.3:20301962-20301981 | MS.gene70368:CDS | 45.0% | |
| TCAACCGTGAGAACTTCAAG+GGG | - | chr4.3:20302202-20302221 | MS.gene70368:intron | 45.0% | |
| TGGTTGTGTCGAGTTATTGG+GGG | - | chr4.3:20300167-20300186 | MS.gene70368:intron | 45.0% | |
| TGTGGAACAAGTTCAGAGAG+GGG | - | chr4.3:20302107-20302126 | MS.gene70368:intron | 45.0% | |
| TGTGGATGGGGTTTATGGAA+TGG | - | chr4.3:20302408-20302427 | MS.gene70368:intron | 45.0% | |
| TTCTAACCGTCAAAGTTCGG+CGG | - | chr4.3:20299949-20299968 | MS.gene70368:intron | 45.0% | |
| ! | AGGGGACTGATACGTTGTTT+TGG | - | chr4.3:20302317-20302336 | MS.gene70368:intron | 45.0% |
| ! | CTGGTTCTCTAGTAAGTGCA+GGG | - | chr4.3:20301953-20301972 | MS.gene70368:CDS | 45.0% |
| ! | GAAACGGAGGGTTCTTTTAC+TGG | - | chr4.3:20300029-20300048 | MS.gene70368:intron | 45.0% |
| ! | GAGGGTTCTTTTACTGGAAG+AGG | - | chr4.3:20300035-20300054 | MS.gene70368:intron | 45.0% |
| ! | GGGGTACTCAACAGACAAAT+GGG | - | chr4.3:20302221-20302240 | MS.gene70368:intron | 45.0% |
| ! | TTTGGAGTGATCCATGGGTA+GGG | - | chr4.3:20302006-20302025 | MS.gene70368:intron | 45.0% |
| ! | TTTTAACCACTTGGGAGGAC+GGG | - | chr4.3:20301916-20301935 | MS.gene70368:CDS | 45.0% |
| !! | AGGGGTACTCAACAGACAAA+TGG | - | chr4.3:20302220-20302239 | MS.gene70368:intron | 45.0% |
| !!! | TTTTGGAGTGATCCATGGGT+AGG | - | chr4.3:20302005-20302024 | MS.gene70368:intron | 45.0% |
| AAAGGATGCTAATGTGGGGG+AGG | - | chr4.3:20302082-20302101 | MS.gene70368:intron | 50.0% | |
| ACAAGTTCAGAGAGGGGTGA+AGG | - | chr4.3:20302113-20302132 | MS.gene70368:intron | 50.0% | |
| AGACTATTGGAGGCTTCCCA+AGG | - | chr4.3:20301342-20301361 | MS.gene70368:intron | 50.0% | |
| AGAGAGGGGTGAAGGAAAGT+GGG | - | chr4.3:20302121-20302140 | MS.gene70368:intron | 50.0% | |
| CGAGTTATTGGGGGATTTCG+AGG | - | chr4.3:20300176-20300195 | MS.gene70368:intron | 50.0% | |
| CGTGTGGAACAAGTTCAGAG+AGG | - | chr4.3:20302105-20302124 | MS.gene70368:intron | 50.0% | |
| CTTCCACGGTAAAGAACTGC+GGG | - | chr4.3:20303021-20303040 | MS.gene70368:CDS | 50.0% | |
| GAACACTCACTGAAGCGAAG+TGG | + | chr4.3:20301432-20301451 | None:intergenic | 50.0% | |
| GACGGAGAAGAACGAGAAGA+AGG | - | chr4.3:20300117-20300136 | MS.gene70368:intron | 50.0% | |
| GAGAAGAAGGAGGAGAGTTC+CGG | - | chr4.3:20300130-20300149 | MS.gene70368:intron | 50.0% | |
| GAGGCCGAAGATTATGAGAG+AGG | - | chr4.3:20300195-20300214 | MS.gene70368:intron | 50.0% | |
| GCAGTTCTTTACCGTGGAAG+TGG | + | chr4.3:20303021-20303040 | None:intergenic | 50.0% | |
| GGAGAAGAACGAGAAGAAGG+AGG | - | chr4.3:20300120-20300139 | MS.gene70368:intron | 50.0% | |
| GTAAGTGCAGGGAAGTAGTG+GGG | - | chr4.3:20301964-20301983 | MS.gene70368:CDS | 50.0% | |
| GTGAAGGAAAGTGGGATTGG+AGG | - | chr4.3:20302129-20302148 | MS.gene70368:intron | 50.0% | |
| TAAGTGCAGGGAAGTAGTGG+GGG | - | chr4.3:20301965-20301984 | MS.gene70368:CDS | 50.0% | |
| TAAGTGTTCTCTGTCGCACG+AGG | - | chr4.3:20300566-20300585 | MS.gene70368:intron | 50.0% | |
| TCACAACCGCCGAACTTTGA+CGG | + | chr4.3:20299958-20299977 | None:intergenic | 50.0% | |
| TCTATTGCAATGGCAGGAGC+AGG | + | chr4.3:20301325-20301344 | None:intergenic | 50.0% | |
| TGAGAGAGGATGGAACAGAG+TGG | - | chr4.3:20300209-20300228 | MS.gene70368:intron | 50.0% | |
| TTTAACCACTTGGGAGGACG+GGG | - | chr4.3:20301917-20301936 | MS.gene70368:CDS | 50.0% | |
| ! | AACAGTCATTCGCGCTGATG+AGG | - | chr4.3:20301387-20301406 | MS.gene70368:intron | 50.0% |
| ! | CTTAGGAAAGTAGTGGGGGA+GGG | - | chr4.3:20302298-20302317 | MS.gene70368:intron | 50.0% |
| ! | GCTGGTTCTCTAGTAAGTGC+AGG | - | chr4.3:20301952-20301971 | MS.gene70368:CDS | 50.0% |
| ! | TCTTAGGAAAGTAGTGGGGG+AGG | - | chr4.3:20302297-20302316 | MS.gene70368:intron | 50.0% |
| ! | TTAGGAAAGTAGTGGGGGAG+GGG | - | chr4.3:20302299-20302318 | MS.gene70368:intron | 50.0% |
| !! | GGGTATTGGATCTCGTTTGG+AGG | - | chr4.3:20302627-20302646 | MS.gene70368:intron | 50.0% |
| ACGGGGAGAGTCAAACAAGC+TGG | - | chr4.3:20301934-20301953 | MS.gene70368:CDS | 55.0% | |
| AGACAAATGGGTCTGGCTGC+GGG | - | chr4.3:20302233-20302252 | MS.gene70368:intron | 55.0% | |
| AGAGACGGAGGCGAAATCGA+CGG | - | chr4.3:20300099-20300118 | MS.gene70368:intron | 55.0% | |
| AGCATCCCTCCAACCATTCC+AGG | + | chr4.3:20301004-20301023 | None:intergenic | 55.0% | |
| AGGATGGAACAGAGTGGCCT+TGG | - | chr4.3:20300215-20300234 | MS.gene70368:intron | 55.0% | |
| AGTGATCCATGGGTAGGGCA+AGG | - | chr4.3:20302011-20302030 | MS.gene70368:intron | 55.0% | |
| AGTTGCAGCTGTCCCTGGAA+TGG | - | chr4.3:20300988-20301007 | MS.gene70368:intron | 55.0% | |
| CAGACAAATGGGTCTGGCTG+CGG | - | chr4.3:20302232-20302251 | MS.gene70368:intron | 55.0% | |
| CAGAGAGGGGTGAAGGAAAG+TGG | - | chr4.3:20302120-20302139 | MS.gene70368:intron | 55.0% | |
| CGAAGTGGTTCACATCCCGA+TGG | + | chr4.3:20301417-20301436 | None:intergenic | 55.0% | |
| CTGTCCCTGGAATGGTTGGA+GGG | - | chr4.3:20300996-20301015 | MS.gene70368:intron | 55.0% | |
| GAAACAGTTGCAGCTGTCCC+TGG | - | chr4.3:20300983-20301002 | MS.gene70368:intron | 55.0% | |
| GAAGCCATCAGCGGAAGAGA+CGG | - | chr4.3:20300084-20300103 | MS.gene70368:intron | 55.0% | |
| GCATCCCTCCAACCATTCCA+GGG | + | chr4.3:20301003-20301022 | None:intergenic | 55.0% | |
| GGGGTGAAGGAAAGTGGGAT+TGG | - | chr4.3:20302126-20302145 | MS.gene70368:intron | 55.0% | |
| GTCAAAGTTCGGCGGTTGTG+AGG | - | chr4.3:20299957-20299976 | MS.gene70368:intron | 55.0% | |
| GTGATCCATGGGTAGGGCAA+GGG | - | chr4.3:20302012-20302031 | MS.gene70368:intron | 55.0% | |
| TCTTCCGCTGATGGCTTCGA+CGG | + | chr4.3:20300082-20300101 | None:intergenic | 55.0% | |
| TGACACGGACACGATGACAC+CGG | + | chr4.3:20300639-20300658 | None:intergenic | 55.0% | |
| TGATCCATGGGTAGGGCAAG+GGG | - | chr4.3:20302013-20302032 | MS.gene70368:intron | 55.0% | |
| ! | ATGGCTCGCCGAGCTTTGAT+CGG | - | chr4.3:20299917-20299936 | MS.gene70368:CDS | 55.0% |
| ! | GTGGCCTTGGAACTGCTTCA+TGG | - | chr4.3:20300228-20300247 | MS.gene70368:intron | 55.0% |
| !! | GCTGGCCATTGGTTTCACAC+TGG | - | chr4.3:20302949-20302968 | MS.gene70368:CDS | 55.0% |
| AGGCATCTCTACGCGGATGG+CGG | - | chr4.3:20300007-20300026 | MS.gene70368:intron | 60.0% | |
| ATCTCCCCTTGCCCTACCCA+TGG | + | chr4.3:20302020-20302039 | None:intergenic | 60.0% | |
| CATCCGCGTAGAGATGCCTC+TGG | + | chr4.3:20300006-20300025 | None:intergenic | 60.0% | |
| CGCTGATGAGGCTCACCATC+GGG | - | chr4.3:20301399-20301418 | MS.gene70368:intron | 60.0% | |
| CGTCCCGCAGTTCTTTACCG+TGG | + | chr4.3:20303027-20303046 | None:intergenic | 60.0% | |
| GCAGCTGTCCCTGGAATGGT+TGG | - | chr4.3:20300992-20301011 | MS.gene70368:intron | 60.0% | |
| GCTGTCCCTGGAATGGTTGG+AGG | - | chr4.3:20300995-20301014 | MS.gene70368:intron | 60.0% | |
| GGCGGTTGTGAGGTCATTCG+CGG | - | chr4.3:20299967-20299986 | MS.gene70368:intron | 60.0% | |
| GGTTGTGAGGTCATTCGCGG+CGG | - | chr4.3:20299970-20299989 | MS.gene70368:intron | 60.0% | |
| TCATTCGCGGCGGCGGAAAT+CGG | - | chr4.3:20299980-20299999 | MS.gene70368:intron | 60.0% | |
| TCCGGCCACCGATCAAAGCT+CGG | + | chr4.3:20299928-20299947 | None:intergenic | 60.0% | |
| TCTGTCGCACGAGGCGTGTA+TGG | - | chr4.3:20300575-20300594 | MS.gene70368:intron | 60.0% | |
| ! | GCAGGGAAGTAGTGGGGGAA+GGG | - | chr4.3:20301970-20301989 | MS.gene70368:CDS | 60.0% |
| ! | GCGCTGATGAGGCTCACCAT+CGG | - | chr4.3:20301398-20301417 | MS.gene70368:intron | 60.0% |
| ! | TGCAGGGAAGTAGTGGGGGA+AGG | - | chr4.3:20301969-20301988 | MS.gene70368:CDS | 60.0% |
| !! | CAGAGGCATCTCTACGCGGA+TGG | - | chr4.3:20300004-20300023 | MS.gene70368:intron | 60.0% |
| !! | CTCTACGCGGATGGCGGAAA+CGG | - | chr4.3:20300013-20300032 | MS.gene70368:intron | 60.0% |
| ACTCTCCCCGTCCTCCCAAG+TGG | + | chr4.3:20301925-20301944 | None:intergenic | 65.0% | |
| ATGGGTCTGGCTGCGGGTGA+AGG | - | chr4.3:20302239-20302258 | MS.gene70368:intron | 65.0% | |
| GCCATCAGCGGAAGAGACGG+AGG | - | chr4.3:20300087-20300106 | MS.gene70368:intron | 65.0% | |
| GCCTCCGTCTCTTCCGCTGA+TGG | + | chr4.3:20300091-20300110 | None:intergenic | 65.0% | |
| TGCGCCGTCGAAGCCATCAG+CGG | - | chr4.3:20300075-20300094 | MS.gene70368:intron | 65.0% | |
| TGGGTCTGGCTGCGGGTGAA+GGG | - | chr4.3:20302240-20302259 | MS.gene70368:intron | 65.0% | |
| TGTGAGGTCATTCGCGGCGG+CGG | - | chr4.3:20299973-20299992 | MS.gene70368:intron | 65.0% | |
| ! | GCCGAGCTTTGATCGGTGGC+CGG | - | chr4.3:20299924-20299943 | MS.gene70368:CDS | 65.0% |
| ! | GCTAATGTGGGGGAGGCGTG+TGG | - | chr4.3:20302089-20302108 | MS.gene70368:intron | 65.0% |
| ! | GCTCGCCGAGCTTTGATCGG+TGG | - | chr4.3:20299920-20299939 | MS.gene70368:CDS | 65.0% |
| !! | ACGCGGATGGCGGAAACGGA+GGG | - | chr4.3:20300017-20300036 | MS.gene70368:intron | 65.0% |
| !! | CGGCCAGAGGCATCTCTACG+CGG | - | chr4.3:20300000-20300019 | MS.gene70368:intron | 65.0% |
| !! | TACGCGGATGGCGGAAACGG+AGG | - | chr4.3:20300016-20300035 | MS.gene70368:intron | 65.0% |
| CGGGACGCACCAGCTCCTCT+TGG | - | chr4.3:20303040-20303059 | MS.gene70368:CDS | 70.0% | |
| GTCTGGCTGCGGGTGAAGGG+AGG | - | chr4.3:20302243-20302262 | MS.gene70368:intron | 70.0% | |
| TGGCTGCGGGTGAAGGGAGG+AGG | - | chr4.3:20302246-20302265 | MS.gene70368:intron | 70.0% | |
| CGGCGGCGGAAATCGGCCAG+AGG | - | chr4.3:20299987-20300006 | MS.gene70368:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 20299893 | 20303072 | 20299893 | ID=MS.gene70368 |
| chr4.3 | mRNA | 20299893 | 20303072 | 20299893 | ID=MS.gene70368.t1;Parent=MS.gene70368 |
| chr4.3 | exon | 20302716 | 20303072 | 20302716 | ID=MS.gene70368.t1.exon1;Parent=MS.gene70368.t1 |
| chr4.3 | CDS | 20302716 | 20303072 | 20302716 | ID=cds.MS.gene70368.t1;Parent=MS.gene70368.t1 |
| chr4.3 | exon | 20302474 | 20302602 | 20302474 | ID=MS.gene70368.t1.exon2;Parent=MS.gene70368.t1 |
| chr4.3 | CDS | 20302474 | 20302602 | 20302474 | ID=cds.MS.gene70368.t1;Parent=MS.gene70368.t1 |
| chr4.3 | exon | 20301524 | 20302012 | 20301524 | ID=MS.gene70368.t1.exon3;Parent=MS.gene70368.t1 |
| chr4.3 | CDS | 20301524 | 20302012 | 20301524 | ID=cds.MS.gene70368.t1;Parent=MS.gene70368.t1 |
| chr4.3 | exon | 20299893 | 20299952 | 20299893 | ID=MS.gene70368.t1.exon4;Parent=MS.gene70368.t1 |
| chr4.3 | CDS | 20299893 | 20299952 | 20299893 | ID=cds.MS.gene70368.t1;Parent=MS.gene70368.t1 |
| Gene Sequence |
| Protein sequence |
