Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78643.t1 | XP_013467507.1 | 98.2 | 507 | 8 | 1 | 1 | 506 | 1 | 507 | 2.60E-279 | 970.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78643.t1 | F4J3G5 | 68.0 | 503 | 147 | 6 | 13 | 506 | 22 | 519 | 5.9e-187 | 655.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78643.t1 | A0A072VHP1 | 98.2 | 507 | 8 | 1 | 1 | 506 | 1 | 507 | 1.9e-279 | 970.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049318 | MS.gene78643 | 0.809294 | 2.03E-50 | -1.69E-46 |
| MS.gene049757 | MS.gene78643 | 0.851348 | 9.41E-61 | -1.69E-46 |
| MS.gene049993 | MS.gene78643 | 0.806771 | 7.00E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene78643 | 0.813079 | 3.07E-51 | -1.69E-46 |
| MS.gene050122 | MS.gene78643 | 0.819182 | 1.33E-52 | -1.69E-46 |
| MS.gene050133 | MS.gene78643 | -0.827628 | 1.41E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene78643 | 0.804612 | 1.99E-49 | -1.69E-46 |
| MS.gene050400 | MS.gene78643 | 0.821614 | 3.68E-53 | -1.69E-46 |
| MS.gene050426 | MS.gene78643 | -0.848798 | 4.87E-60 | -1.69E-46 |
| MS.gene050553 | MS.gene78643 | 0.830591 | 2.69E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene78643 | 0.863397 | 2.56E-64 | -1.69E-46 |
| MS.gene05105 | MS.gene78643 | 0.800133 | 1.66E-48 | -1.69E-46 |
| MS.gene051521 | MS.gene78643 | 0.841165 | 5.61E-58 | -1.69E-46 |
| MS.gene051525 | MS.gene78643 | 0.911071 | 9.20E-83 | -1.69E-46 |
| MS.gene051588 | MS.gene78643 | 0.868968 | 4.40E-66 | -1.69E-46 |
| MS.gene051838 | MS.gene78643 | 0.801166 | 1.02E-48 | -1.69E-46 |
| MS.gene051941 | MS.gene78643 | 0.806753 | 7.06E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene78643 | -0.881843 | 1.71E-70 | -1.69E-46 |
| MS.gene052128 | MS.gene78643 | -0.807628 | 4.61E-50 | -1.69E-46 |
| MS.gene052134 | MS.gene78643 | 0.826335 | 2.87E-54 | -1.69E-46 |
| MS.gene052135 | MS.gene78643 | 0.829574 | 4.77E-55 | -1.69E-46 |
| MS.gene052136 | MS.gene78643 | 0.809405 | 1.92E-50 | -1.69E-46 |
| MS.gene052159 | MS.gene78643 | 0.82245 | 2.35E-53 | -1.69E-46 |
| MS.gene052253 | MS.gene78643 | 0.836684 | 8.10E-57 | -1.69E-46 |
| MS.gene052346 | MS.gene78643 | 0.861444 | 1.02E-63 | -1.69E-46 |
| MS.gene052414 | MS.gene78643 | 0.877552 | 5.74E-69 | -1.69E-46 |
| MS.gene052469 | MS.gene78643 | 0.818141 | 2.29E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene78643 | 0.805455 | 1.32E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene78643 | 0.805009 | 1.64E-49 | -1.69E-46 |
| MS.gene052589 | MS.gene78643 | 0.811878 | 5.62E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene78643 | 0.856634 | 2.82E-62 | -1.69E-46 |
| MS.gene052999 | MS.gene78643 | 0.82059 | 6.33E-53 | -1.69E-46 |
| MS.gene053169 | MS.gene78643 | 0.888688 | 4.73E-73 | -1.69E-46 |
| MS.gene053176 | MS.gene78643 | 0.824816 | 6.58E-54 | -1.69E-46 |
| MS.gene053318 | MS.gene78643 | 0.817905 | 2.59E-52 | -1.69E-46 |
| MS.gene053330 | MS.gene78643 | 0.804579 | 2.02E-49 | -1.69E-46 |
| MS.gene05335 | MS.gene78643 | 0.808665 | 2.77E-50 | -1.69E-46 |
| MS.gene053889 | MS.gene78643 | 0.821894 | 3.17E-53 | -1.69E-46 |
| MS.gene053928 | MS.gene78643 | 0.803345 | 3.64E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene78643 | 0.805639 | 1.21E-49 | -1.69E-46 |
| MS.gene054102 | MS.gene78643 | 0.847351 | 1.22E-59 | -1.69E-46 |
| MS.gene054107 | MS.gene78643 | 0.812075 | 5.09E-51 | -1.69E-46 |
| MS.gene054110 | MS.gene78643 | 0.813084 | 3.06E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene78643 | 0.878417 | 2.86E-69 | -1.69E-46 |
| MS.gene054349 | MS.gene78643 | 0.81053 | 1.10E-50 | -1.69E-46 |
| MS.gene054548 | MS.gene78643 | 0.845543 | 3.80E-59 | -1.69E-46 |
| MS.gene054556 | MS.gene78643 | 0.895021 | 1.42E-75 | -1.69E-46 |
| MS.gene054719 | MS.gene78643 | 0.846326 | 2.33E-59 | -1.69E-46 |
| MS.gene054920 | MS.gene78643 | 0.863764 | 1.97E-64 | -1.69E-46 |
| MS.gene055116 | MS.gene78643 | 0.816068 | 6.69E-52 | -1.69E-46 |
| MS.gene055369 | MS.gene78643 | 0.888922 | 3.84E-73 | -1.69E-46 |
| MS.gene055539 | MS.gene78643 | 0.876489 | 1.34E-68 | -1.69E-46 |
| MS.gene05553 | MS.gene78643 | 0.845942 | 2.96E-59 | -1.69E-46 |
| MS.gene05556 | MS.gene78643 | 0.875851 | 2.22E-68 | -1.69E-46 |
| MS.gene055741 | MS.gene78643 | 0.893762 | 4.65E-75 | -1.69E-46 |
| MS.gene055744 | MS.gene78643 | 0.903325 | 3.90E-79 | -1.69E-46 |
| MS.gene055893 | MS.gene78643 | 0.808898 | 2.47E-50 | -1.69E-46 |
| MS.gene055909 | MS.gene78643 | 0.842867 | 1.99E-58 | -1.69E-46 |
| MS.gene055911 | MS.gene78643 | 0.848245 | 6.93E-60 | -1.69E-46 |
| MS.gene05594 | MS.gene78643 | 0.802259 | 6.11E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene78643 | 0.81233 | 4.48E-51 | -1.69E-46 |
| MS.gene056346 | MS.gene78643 | 0.831848 | 1.32E-55 | -1.69E-46 |
| MS.gene056514 | MS.gene78643 | 0.905664 | 3.38E-80 | -1.69E-46 |
| MS.gene056723 | MS.gene78643 | 0.839909 | 1.20E-57 | -1.69E-46 |
| MS.gene056877 | MS.gene78643 | 0.829556 | 4.82E-55 | -1.69E-46 |
| MS.gene057019 | MS.gene78643 | 0.856298 | 3.54E-62 | -1.69E-46 |
| MS.gene057124 | MS.gene78643 | 0.847448 | 1.15E-59 | -1.69E-46 |
| MS.gene057289 | MS.gene78643 | 0.821157 | 4.69E-53 | -1.69E-46 |
| MS.gene057396 | MS.gene78643 | 0.843994 | 9.95E-59 | -1.69E-46 |
| MS.gene057476 | MS.gene78643 | 0.833596 | 4.87E-56 | -1.69E-46 |
| MS.gene057749 | MS.gene78643 | 0.847516 | 1.10E-59 | -1.69E-46 |
| MS.gene057823 | MS.gene78643 | 0.847957 | 8.32E-60 | -1.69E-46 |
| MS.gene057825 | MS.gene78643 | 0.852104 | 5.75E-61 | -1.69E-46 |
| MS.gene057826 | MS.gene78643 | 0.815418 | 9.34E-52 | -1.69E-46 |
| MS.gene057888 | MS.gene78643 | 0.831539 | 1.58E-55 | -1.69E-46 |
| MS.gene058007 | MS.gene78643 | 0.826076 | 3.31E-54 | -1.69E-46 |
| MS.gene058120 | MS.gene78643 | 0.814574 | 1.44E-51 | -1.69E-46 |
| MS.gene058376 | MS.gene78643 | 0.817967 | 2.51E-52 | -1.69E-46 |
| MS.gene058444 | MS.gene78643 | 0.867682 | 1.14E-65 | -1.69E-46 |
| MS.gene058700 | MS.gene78643 | 0.878093 | 3.71E-69 | -1.69E-46 |
| MS.gene058948 | MS.gene78643 | 0.832814 | 7.63E-56 | -1.69E-46 |
| MS.gene059011 | MS.gene78643 | 0.842618 | 2.32E-58 | -1.69E-46 |
| MS.gene059082 | MS.gene78643 | 0.828366 | 9.35E-55 | -1.69E-46 |
| MS.gene059141 | MS.gene78643 | 0.809028 | 2.32E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene78643 | 0.899125 | 2.70E-77 | -1.69E-46 |
| MS.gene059462 | MS.gene78643 | 0.832065 | 1.17E-55 | -1.69E-46 |
| MS.gene059868 | MS.gene78643 | 0.867038 | 1.84E-65 | -1.69E-46 |
| MS.gene059876 | MS.gene78643 | 0.811984 | 5.32E-51 | -1.69E-46 |
| MS.gene059933 | MS.gene78643 | 0.828551 | 8.44E-55 | -1.69E-46 |
| MS.gene059946 | MS.gene78643 | 0.817411 | 3.34E-52 | -1.69E-46 |
| MS.gene059958 | MS.gene78643 | 0.80369 | 3.09E-49 | -1.69E-46 |
| MS.gene060372 | MS.gene78643 | 0.882475 | 1.01E-70 | -1.69E-46 |
| MS.gene060403 | MS.gene78643 | 0.817971 | 2.50E-52 | -1.69E-46 |
| MS.gene060485 | MS.gene78643 | 0.825647 | 4.18E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene78643 | 0.806394 | 8.41E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene78643 | 0.874448 | 6.70E-68 | -1.69E-46 |
| MS.gene061214 | MS.gene78643 | 0.847571 | 1.06E-59 | -1.69E-46 |
| MS.gene061215 | MS.gene78643 | 0.845526 | 3.84E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78643.t1 | MTR_1g052135 | 98.225 | 507 | 8 | 1 | 1 | 506 | 1 | 507 | 0.0 | 1021 |
| MS.gene78643.t1 | MTR_1g052135 | 98.925 | 372 | 3 | 1 | 136 | 506 | 1 | 372 | 0.0 | 753 |
| MS.gene78643.t1 | MTR_1g052135 | 97.640 | 339 | 8 | 0 | 1 | 339 | 1 | 339 | 0.0 | 685 |
| MS.gene78643.t1 | MTR_1g073130 | 38.352 | 352 | 207 | 5 | 113 | 459 | 122 | 468 | 7.61e-76 | 248 |
| MS.gene78643.t1 | MTR_8g088150 | 35.870 | 368 | 221 | 8 | 100 | 461 | 86 | 444 | 1.08e-68 | 228 |
| MS.gene78643.t1 | MTR_8g088150 | 30.000 | 270 | 170 | 8 | 100 | 361 | 86 | 344 | 4.05e-34 | 132 |
| MS.gene78643.t1 | MTR_8g088150 | 29.688 | 256 | 161 | 8 | 100 | 347 | 86 | 330 | 1.88e-29 | 118 |
| MS.gene78643.t1 | MTR_8g088150 | 32.967 | 182 | 107 | 6 | 100 | 273 | 86 | 260 | 1.28e-18 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78643.t1 | AT3G57680 | 75.515 | 437 | 101 | 3 | 75 | 506 | 84 | 519 | 0.0 | 687 |
| MS.gene78643.t1 | AT3G57680 | 74.865 | 370 | 88 | 2 | 142 | 506 | 1 | 370 | 0.0 | 575 |
| MS.gene78643.t1 | AT3G57680 | 74.865 | 370 | 88 | 2 | 142 | 506 | 1 | 370 | 0.0 | 575 |
| MS.gene78643.t1 | AT4G17740 | 40.227 | 353 | 199 | 6 | 113 | 459 | 134 | 480 | 6.49e-77 | 251 |
| MS.gene78643.t1 | AT4G17740 | 40.227 | 353 | 199 | 6 | 113 | 459 | 124 | 470 | 7.62e-77 | 250 |
| MS.gene78643.t1 | AT5G46390 | 34.066 | 364 | 225 | 6 | 104 | 461 | 114 | 468 | 2.59e-60 | 206 |
| MS.gene78643.t1 | AT5G46390 | 28.179 | 291 | 194 | 6 | 104 | 388 | 114 | 395 | 6.16e-31 | 124 |
Find 117 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAACAAACCTACCAAATT+TGG | 0.155558 | 1.4:+42332612 | None:intergenic |
| TGAAGAGAAGGAGGTGAATA+AGG | 0.261653 | 1.4:-42332523 | MS.gene78643:CDS |
| TAAAGTACCAAAACCAAATT+TGG | 0.279525 | 1.4:-42332625 | MS.gene78643:CDS |
| AAACCTACCAAATTTGGTTT+TGG | 0.289069 | 1.4:+42332618 | None:intergenic |
| TCTGCAGGGGAGAGGCTTAA+TGG | 0.313855 | 1.4:-42329981 | MS.gene78643:intron |
| ACCTCAGGTGCGCGTGAAAC+TGG | 0.314414 | 1.4:+42332372 | None:intergenic |
| TGAGATTGAGGCCTTATCTT+TGG | 0.316864 | 1.4:+42327298 | None:intergenic |
| GATGAATTAGTTGAGATAAA+TGG | 0.319393 | 1.4:-42330149 | MS.gene78643:intron |
| GTTTGTTTCCTCGTAGGTTA+TGG | 0.324357 | 1.4:-42332599 | MS.gene78643:CDS |
| TGAAGCATGGGGTTTGATTC+GGG | 0.349053 | 1.4:-42331317 | MS.gene78643:CDS |
| TTGAAGCATGGGGTTTGATT+CGG | 0.352478 | 1.4:-42331318 | MS.gene78643:CDS |
| TGACATGCGAAATGCTATTC+AGG | 0.354095 | 1.4:-42328819 | MS.gene78643:CDS |
| TCTTTGGTTGATAGTTCCTT+TGG | 0.354259 | 1.4:+42327314 | None:intergenic |
| CTGACCAAATGTCCTGTTCT+TGG | 0.355413 | 1.4:+42330480 | None:intergenic |
| CGGAAGTGATGGAAACTTGC+AGG | 0.367201 | 1.4:-42330529 | MS.gene78643:CDS |
| GGAAGCAGATTCATGCATTA+TGG | 0.377657 | 1.4:-42327270 | MS.gene78643:CDS |
| CTTGTGGGGAACAAAACATT+TGG | 0.382361 | 1.4:-42327931 | MS.gene78643:CDS |
| GGTGCAGCACAGAGGCTTAG+AGG | 0.393697 | 1.4:-42329945 | MS.gene78643:CDS |
| TCTGTCGTGCACTGAACGTC+TGG | 0.404197 | 1.4:+42327347 | None:intergenic |
| CGTGATGCCCATGTTGTTGT+TGG | 0.405184 | 1.4:+42332570 | None:intergenic |
| TGTTCAAGAAACAGTCCCTT+TGG | 0.409726 | 1.4:+42327217 | None:intergenic |
| GCTGGGGCGTTACATGATAA+TGG | 0.413961 | 1.4:-42327964 | MS.gene78643:CDS |
| TTCGTACTTACAGGAATATC+AGG | 0.418545 | 1.4:-42330562 | MS.gene78643:intron |
| GGTGAATAAGGTAGTGGTAG+TGG | 0.429704 | 1.4:-42332511 | MS.gene78643:CDS |
| AGTATGTATGAGTGAGCTCC+TGG | 0.431609 | 1.4:+42328785 | None:intergenic |
| ATTTGGAAAAGGAAAGATTC+AGG | 0.435352 | 1.4:-42327914 | MS.gene78643:intron |
| TAAGGCCTCAATCTCATCTC+TGG | 0.437628 | 1.4:-42327291 | MS.gene78643:CDS |
| TGAGCCAAGAACAGGACATT+TGG | 0.445795 | 1.4:-42330484 | MS.gene78643:intron |
| GTTGCTCAGATGTGGTTAGA+TGG | 0.450686 | 1.4:-42328616 | MS.gene78643:CDS |
| GTCGTTTGAGGTTGAAGAGA+AGG | 0.458986 | 1.4:-42332535 | MS.gene78643:CDS |
| GAAGAGGAAGGTGTCGTTTG+AGG | 0.459539 | 1.4:-42332547 | MS.gene78643:CDS |
| TGAATACCGGCACGAGCAGC+TGG | 0.467849 | 1.4:+42330179 | None:intergenic |
| ATGTCCATCGATCATATTGA+TGG | 0.470658 | 1.4:+42328546 | None:intergenic |
| ATAAATGTTGAGCCAAGAAC+AGG | 0.474577 | 1.4:-42330492 | MS.gene78643:CDS |
| GGGAACAAAACATTTGGAAA+AGG | 0.480082 | 1.4:-42327925 | MS.gene78643:CDS |
| TGAGGATCTGTGAGGAATGA+TGG | 0.483757 | 1.4:+42329337 | None:intergenic |
| AAGAACTCTTGTTGAAGCAT+GGG | 0.485105 | 1.4:-42331329 | MS.gene78643:CDS |
| TTCATCTCCTTGATGAATAC+CGG | 0.491367 | 1.4:+42330166 | None:intergenic |
| GGAATGATGGCACTTGATAT+TGG | 0.493428 | 1.4:+42329350 | None:intergenic |
| AATGGTCGAGCTATTCTTGT+GGG | 0.494288 | 1.4:-42327946 | MS.gene78643:CDS |
| AGTGGAATGCTTTCTACACT+TGG | 0.497192 | 1.4:-42331015 | MS.gene78643:CDS |
| GAAGGAGGTGAATAAGGTAG+TGG | 0.501122 | 1.4:-42332517 | MS.gene78643:CDS |
| CACTAGAATTATTAGTCCGA+AGG | 0.501167 | 1.4:-42330983 | MS.gene78643:intron |
| GAAATTGTCAACCTTCTCTC+AGG | 0.507010 | 1.4:-42329285 | MS.gene78643:intron |
| CAGAGGCTTAGAGGGAATGC+TGG | 0.507723 | 1.4:-42329936 | MS.gene78643:CDS |
| CAGGGTGGTTTGGTAAAAGC+AGG | 0.508692 | 1.4:-42328646 | MS.gene78643:CDS |
| GATCCTACATTTAATCATCA+AGG | 0.509526 | 1.4:-42331283 | MS.gene78643:intron |
| AAAGAACTCTTGTTGAAGCA+TGG | 0.512172 | 1.4:-42331330 | MS.gene78643:CDS |
| AGAACATGAGTTGGATATGA+AGG | 0.513377 | 1.4:-42327243 | MS.gene78643:CDS |
| CGACCTGATCTATGTCATGA+AGG | 0.514048 | 1.4:+42327378 | None:intergenic |
| AAACTGGAAAAGCAACAGTA+AGG | 0.514928 | 1.4:+42332388 | None:intergenic |
| TTCATGACATAGATCAGGTC+GGG | 0.516139 | 1.4:-42327376 | MS.gene78643:CDS |
| GATGGAAACTTGCAGGGAGT+TGG | 0.519602 | 1.4:-42330522 | MS.gene78643:CDS |
| GGAACTATCAACCAAAGATA+AGG | 0.519630 | 1.4:-42327309 | MS.gene78643:CDS |
| GTGCAGCACAGAGGCTTAGA+GGG | 0.523821 | 1.4:-42329944 | MS.gene78643:CDS |
| TGATCTATGTCATGAAGGGC+TGG | 0.525259 | 1.4:+42327383 | None:intergenic |
| AACAGTCCAGCTGCTCGTGC+CGG | 0.526284 | 1.4:-42330185 | MS.gene78643:CDS |
| TCACAGATCCTCAGAAGGGC+AGG | 0.527833 | 1.4:-42329327 | MS.gene78643:CDS |
| GAATATCAGGGATTTAGAAT+CGG | 0.529054 | 1.4:-42330549 | MS.gene78643:CDS |
| TCCAGTTTCACGCGCACCTG+AGG | 0.529056 | 1.4:-42332373 | MS.gene78643:intron |
| CGCCCCAGCTAAAATCTCGC+TGG | 0.533641 | 1.4:+42327978 | None:intergenic |
| AGCCCTTCATGACATAGATC+AGG | 0.537489 | 1.4:-42327381 | MS.gene78643:CDS |
| GGATTTAGAATCGGAAGTGA+TGG | 0.544179 | 1.4:-42330540 | MS.gene78643:CDS |
| TCTTCTGCTCACCTGAGAGA+AGG | 0.546133 | 1.4:+42329274 | None:intergenic |
| TGGTAGGTTTGTTTCCTCGT+AGG | 0.548540 | 1.4:-42332605 | MS.gene78643:CDS |
| GTACCAAAACCAAATTTGGT+AGG | 0.549119 | 1.4:-42332621 | MS.gene78643:CDS |
| ATACCTTGATGATTAAATGT+AGG | 0.550456 | 1.4:+42331280 | None:intergenic |
| GTACTCACAATCACTACAAG+TGG | 0.553433 | 1.4:+42328508 | None:intergenic |
| GCCTTGATGTTGCTCAGATG+TGG | 0.555679 | 1.4:-42328624 | MS.gene78643:CDS |
| ACTCATACATACTTGATCTA+CGG | 0.556612 | 1.4:-42328775 | MS.gene78643:CDS |
| TATGGTAGCAGAACATGAGT+TGG | 0.558734 | 1.4:-42327252 | MS.gene78643:CDS |
| TTGGCTCAACATTTATGAAG+AGG | 0.560601 | 1.4:+42330499 | None:intergenic |
| GATCGGATTCTGCAGGGGAG+AGG | 0.561103 | 1.4:-42329989 | MS.gene78643:intron |
| AGGGATTGAGAGAGAGCTGT+AGG | 0.565235 | 1.4:+42332408 | None:intergenic |
| GGACTAATAATTCTAGTGAA+AGG | 0.566046 | 1.4:+42330988 | None:intergenic |
| GTTTGAGGTTGAAGAGAAGG+AGG | 0.567938 | 1.4:-42332532 | MS.gene78643:CDS |
| CAACATGGGCATCACGGAAG+AGG | 0.568371 | 1.4:-42332563 | MS.gene78643:CDS |
| GGTTACTACCAACAACAACA+TGG | 0.570072 | 1.4:-42332578 | MS.gene78643:CDS |
| AGTGTCACTCAGCTTCATGA+TGG | 0.570563 | 1.4:-42327443 | MS.gene78643:CDS |
| TGCTTCCAGAGATGAGATTG+AGG | 0.571908 | 1.4:+42327286 | None:intergenic |
| GAGAGCTTGATATACTCCCT+TGG | 0.574347 | 1.4:+42329374 | None:intergenic |
| TGGAACAACTGTTACAGTAA+AGG | 0.574531 | 1.4:-42329916 | MS.gene78643:intron |
| AACTGGAAAAGCAACAGTAA+GGG | 0.576569 | 1.4:+42332389 | None:intergenic |
| GACAGAAATGCTTTCACCAA+AGG | 0.581163 | 1.4:-42327330 | MS.gene78643:CDS |
| CAACAACAACATGGGCATCA+CGG | 0.583305 | 1.4:-42332569 | MS.gene78643:CDS |
| TGGATATGAAGGATTCCAAA+GGG | 0.591184 | 1.4:-42327232 | MS.gene78643:CDS |
| GCTCGTGCCGGTATTCATCA+AGG | 0.592072 | 1.4:-42330173 | MS.gene78643:CDS |
| TCACCCATCAATATGATCGA+TGG | 0.593034 | 1.4:-42328550 | MS.gene78643:CDS |
| AGAACTCTTGTTGAAGCATG+GGG | 0.593442 | 1.4:-42331328 | MS.gene78643:CDS |
| TGATTTAGGTTAAATTACCA+AGG | 0.594204 | 1.4:-42329391 | MS.gene78643:intron |
| GTGAATACGATCGATAGAGA+TGG | 0.599377 | 1.4:-42328580 | MS.gene78643:CDS |
| ATCAGCCCTCTTTGTTACAG+TGG | 0.602610 | 1.4:-42327420 | MS.gene78643:CDS |
| ACCACATCTGAGCAACATCA+AGG | 0.604021 | 1.4:+42328623 | None:intergenic |
| GCTGCATCAGCTGAGTTCAA+AGG | 0.605499 | 1.4:+42331051 | None:intergenic |
| ATTCCTCACAGATCCTCAGA+AGG | 0.609415 | 1.4:-42329332 | MS.gene78643:CDS |
| GACCTGATCTATGTCATGAA+GGG | 0.610507 | 1.4:+42327379 | None:intergenic |
| GATTTAGGTTAAATTACCAA+GGG | 0.612692 | 1.4:-42329390 | MS.gene78643:intron |
| GAAGTTGCAGCAAACAATGG+TGG | 0.613750 | 1.4:-42331082 | MS.gene78643:CDS |
| TCGTACTTACAGGAATATCA+GGG | 0.618631 | 1.4:-42330561 | MS.gene78643:intron |
| TGTCCATCGATCATATTGAT+GGG | 0.620108 | 1.4:+42328547 | None:intergenic |
| GGAAGTGATGGAAACTTGCA+GGG | 0.622269 | 1.4:-42330528 | MS.gene78643:CDS |
| ATGGGCATCACGGAAGAGGA+AGG | 0.625191 | 1.4:-42332559 | MS.gene78643:CDS |
| GTTAGATGGAGATGAGACTC+TGG | 0.626212 | 1.4:-42328602 | MS.gene78643:CDS |
| TTGGATATGAAGGATTCCAA+AGG | 0.629055 | 1.4:-42327233 | MS.gene78643:CDS |
| TATGAAGTTGCAGCAAACAA+TGG | 0.629584 | 1.4:-42331085 | MS.gene78643:CDS |
| CTTAATGGCATTGATAGTGA+AGG | 0.632924 | 1.4:-42329966 | MS.gene78643:CDS |
| CTTCATGACATAGATCAGGT+CGG | 0.643951 | 1.4:-42327377 | MS.gene78643:CDS |
| TTCCTCACAGATCCTCAGAA+GGG | 0.645666 | 1.4:-42329331 | MS.gene78643:CDS |
| TAATGGTCGAGCTATTCTTG+TGG | 0.648076 | 1.4:-42327947 | MS.gene78643:CDS |
| GTTACTACCAACAACAACAT+GGG | 0.656333 | 1.4:-42332577 | MS.gene78643:CDS |
| TTTCCTCAACAGGTCAACGA+GGG | 0.669643 | 1.4:-42328012 | MS.gene78643:intron |
| ATGGTCGAGCTATTCTTGTG+GGG | 0.684296 | 1.4:-42327945 | MS.gene78643:CDS |
| GTTTCCTCAACAGGTCAACG+AGG | 0.686788 | 1.4:-42328013 | MS.gene78643:intron |
| TACAAACTCTTATATCCGTG+AGG | 0.689138 | 1.4:-42329544 | MS.gene78643:intron |
| TGCCCTTCTGAGGATCTGTG+AGG | 0.713131 | 1.4:+42329329 | None:intergenic |
| ATAGTGAAGGTGCAGCACAG+AGG | 0.775625 | 1.4:-42329953 | MS.gene78643:CDS |
| GGTAGTAACCATAACCTACG+AGG | 0.780903 | 1.4:+42332591 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAACACTAATTTTAAA+AGG | + | chr1.4:42329536-42329555 | None:intergenic | 10.0% |
| !!! | ATAACTTTTAAAAAAATGAA+AGG | - | chr1.4:42327844-42327863 | MS.gene78643:intron | 10.0% |
| !!! | ATTTTTTCTTTTAAAATTCT+TGG | - | chr1.4:42329559-42329578 | MS.gene78643:CDS | 10.0% |
| !!! | TAACTTTTAAAAAAATGAAA+GGG | - | chr1.4:42327845-42327864 | MS.gene78643:intron | 10.0% |
| !!! | TCTCAATTTTTTTAAAAAAA+AGG | + | chr1.4:42327955-42327974 | None:intergenic | 10.0% |
| !!! | TTATTTTAATTGCTTTTTAT+TGG | - | chr1.4:42328261-42328280 | MS.gene78643:intron | 10.0% |
| !! | AAAAATTAGTAACTTAAGAT+AGG | - | chr1.4:42328989-42329008 | MS.gene78643:intron | 15.0% |
| !! | AAATGAATGATAAAAAATTC+AGG | + | chr1.4:42331747-42331766 | None:intergenic | 15.0% |
| !! | AACAAAGTTGTTTATTAAAA+AGG | - | chr1.4:42330994-42331013 | MS.gene78643:CDS | 15.0% |
| !! | AATTAAAATAATACCAACAT+GGG | + | chr1.4:42328252-42328271 | None:intergenic | 15.0% |
| !! | ACAAAGTTGTTTATTAAAAA+GGG | - | chr1.4:42330995-42331014 | MS.gene78643:CDS | 15.0% |
| !! | ACATAAACATTTATATGATA+AGG | - | chr1.4:42330953-42330972 | MS.gene78643:intron | 15.0% |
| !! | GTATCTTACTTTAATTATAA+GGG | - | chr1.4:42329199-42329218 | MS.gene78643:intron | 15.0% |
| !! | TACAAACTTTATCTTAATAT+AGG | - | chr1.4:42330723-42330742 | MS.gene78643:intron | 15.0% |
| !! | TGTATCTTACTTTAATTATA+AGG | - | chr1.4:42329198-42329217 | MS.gene78643:intron | 15.0% |
| !!! | AATTAAAGTCTTATGTTTAA+CGG | - | chr1.4:42329298-42329317 | MS.gene78643:CDS | 15.0% |
| !!! | AATTTTCTTTTGTTTGAAAA+TGG | - | chr1.4:42329875-42329894 | MS.gene78643:intron | 15.0% |
| !!! | ATATTTTAGAATAACTAACT+TGG | + | chr1.4:42329769-42329788 | None:intergenic | 15.0% |
| !!! | ATTTTGCATTATAATTCAAA+GGG | - | chr1.4:42328322-42328341 | MS.gene78643:intron | 15.0% |
| !! | AACAATGTATAATATACGAA+GGG | + | chr1.4:42327766-42327785 | None:intergenic | 20.0% |
| !! | AATGTTAAAAGTCATATTTG+TGG | - | chr1.4:42329223-42329242 | MS.gene78643:intron | 20.0% |
| !! | ATTTAACCTAAATCATACAT+TGG | + | chr1.4:42330490-42330509 | None:intergenic | 20.0% |
| !! | CAAAGTTGTTTATTAAAAAG+GGG | - | chr1.4:42330996-42331015 | MS.gene78643:CDS | 20.0% |
| !! | CAATTAAAATAATACCAACA+TGG | + | chr1.4:42328253-42328272 | None:intergenic | 20.0% |
| !! | CTTTGAATTATAATGCAAAA+TGG | + | chr1.4:42328323-42328342 | None:intergenic | 20.0% |
| !! | GCTTAATATAGAATATGATT+AGG | + | chr1.4:42328643-42328662 | None:intergenic | 20.0% |
| !! | TAAAAATATCTGAAAATCAC+AGG | - | chr1.4:42329658-42329677 | MS.gene78643:intron | 20.0% |
| !! | TATGGTAACTAATTATTACT+GGG | + | chr1.4:42327660-42327679 | None:intergenic | 20.0% |
| !!! | AAAACACTAATTTTAAAAGG+AGG | + | chr1.4:42329533-42329552 | None:intergenic | 20.0% |
| !!! | AACTGAAATTTTCATGAAAA+TGG | + | chr1.4:42331154-42331173 | None:intergenic | 20.0% |
| !!! | AATGTTATTTATAAGACCTT+CGG | + | chr1.4:42328922-42328941 | None:intergenic | 20.0% |
| !!! | ATACGATTTTCTTTCTTTAT+GGG | + | chr1.4:42328194-42328213 | None:intergenic | 20.0% |
| !!! | CATTTTGCATTATAATTCAA+AGG | - | chr1.4:42328321-42328340 | MS.gene78643:intron | 20.0% |
| !!! | TGTTTTAAGGTCATATTAAT+TGG | - | chr1.4:42329112-42329131 | MS.gene78643:intron | 20.0% |
| ! | AATTCACAATATTCCATTGA+TGG | - | chr1.4:42330463-42330482 | MS.gene78643:intron | 25.0% |
| ! | ACAATGTATAATATACGAAG+GGG | + | chr1.4:42327765-42327784 | None:intergenic | 25.0% |
| ! | AGAATCACTTATAGAAAAAC+TGG | - | chr1.4:42330632-42330651 | MS.gene78643:intron | 25.0% |
| ! | ATAGAAAATCAAGATGTGAA+AGG | + | chr1.4:42331800-42331819 | None:intergenic | 25.0% |
| ! | ATGCATTCTATATGCAAATT+TGG | + | chr1.4:42328674-42328693 | None:intergenic | 25.0% |
| ! | CAAAATTTACATGTCAACTA+TGG | + | chr1.4:42327678-42327697 | None:intergenic | 25.0% |
| ! | CAAGTGGATATTTATATGAA+AGG | + | chr1.4:42331640-42331659 | None:intergenic | 25.0% |
| ! | CAGTGAATGTTAAATTGATT+TGG | - | chr1.4:42331494-42331513 | MS.gene78643:intron | 25.0% |
| ! | CATAAAGAAAGAAAATCGTA+TGG | - | chr1.4:42328193-42328212 | MS.gene78643:intron | 25.0% |
| ! | CATTATGTAATGAAAAAGAC+TGG | + | chr1.4:42332000-42332019 | None:intergenic | 25.0% |
| ! | CTATGGTAACTAATTATTAC+TGG | + | chr1.4:42327661-42327680 | None:intergenic | 25.0% |
| ! | CTTAAACTTAACTCAGTTAT+AGG | + | chr1.4:42327789-42327808 | None:intergenic | 25.0% |
| ! | GAAACTATGATATTTCACAA+TGG | + | chr1.4:42329997-42330016 | None:intergenic | 25.0% |
| ! | GAACAATGTATAATATACGA+AGG | + | chr1.4:42327767-42327786 | None:intergenic | 25.0% |
| ! | GATGAATTAGTTGAGATAAA+TGG | - | chr1.4:42329737-42329756 | MS.gene78643:intron | 25.0% |
| ! | GCAATAACATTACCATATAT+TGG | + | chr1.4:42329024-42329043 | None:intergenic | 25.0% |
| ! | TAACCTTAAAAGGTGAATTT+CGG | + | chr1.4:42327713-42327732 | None:intergenic | 25.0% |
| ! | TCATGAAAATGGTAAATTAC+AGG | + | chr1.4:42331143-42331162 | None:intergenic | 25.0% |
| ! | TCATGTGGTACAAAATAAAA+AGG | + | chr1.4:42331435-42331454 | None:intergenic | 25.0% |
| ! | TTAAAAGTCATATTTGTGGT+TGG | - | chr1.4:42329227-42329246 | MS.gene78643:intron | 25.0% |
| ! | TTAAACAGAAAACACTCTTA+TGG | + | chr1.4:42332145-42332164 | None:intergenic | 25.0% |
| ! | TTGTTTCATGATATTCCTTT+GGG | + | chr1.4:42332072-42332091 | None:intergenic | 25.0% |
| !! | AAAATTTCAGGTAAAAACGT+AGG | + | chr1.4:42331216-42331235 | None:intergenic | 25.0% |
| !! | AAATTTTCAACTTTACCTCA+CGG | + | chr1.4:42330360-42330379 | None:intergenic | 25.0% |
| !! | AACTTTCAGTTTCATTTTCT+TGG | - | chr1.4:42330140-42330159 | MS.gene78643:intron | 25.0% |
| !! | ACCTTGACTACTTTAAAAAA+TGG | - | chr1.4:42330183-42330202 | MS.gene78643:CDS | 25.0% |
| !! | AGATCAACAAATCTGTTTTA+AGG | - | chr1.4:42329099-42329118 | MS.gene78643:intron | 25.0% |
| !! | AGTTTCATTTTCTTGGAAAT+AGG | - | chr1.4:42330147-42330166 | MS.gene78643:intron | 25.0% |
| !! | ATACCTTGATGATTAAATGT+AGG | + | chr1.4:42328609-42328628 | None:intergenic | 25.0% |
| !! | CATACGATTTTCTTTCTTTA+TGG | + | chr1.4:42328195-42328214 | None:intergenic | 25.0% |
| !! | GATTTAGGTTAAATTACCAA+GGG | - | chr1.4:42330496-42330515 | MS.gene78643:CDS | 25.0% |
| !! | GTTTCATTTTCTTGGAAATA+GGG | - | chr1.4:42330148-42330167 | MS.gene78643:intron | 25.0% |
| !! | TAAAGTACCAAAACCAAATT+TGG | - | chr1.4:42327261-42327280 | MS.gene78643:CDS | 25.0% |
| !! | TGATTTAGGTTAAATTACCA+AGG | - | chr1.4:42330495-42330514 | MS.gene78643:CDS | 25.0% |
| !! | TTTAAAACAGAAATCAACAC+AGG | + | chr1.4:42329609-42329628 | None:intergenic | 25.0% |
| !! | TTTCATTTTCTTGGAAATAG+GGG | - | chr1.4:42330149-42330168 | MS.gene78643:intron | 25.0% |
| !!! | AAATGGAGTACTACTTATTT+TGG | + | chr1.4:42328306-42328325 | None:intergenic | 25.0% |
| !!! | AAGAGTGTTTTCTGTTTAAA+AGG | - | chr1.4:42332146-42332165 | MS.gene78643:intron | 25.0% |
| !!! | AATGGAGTACTACTTATTTT+GGG | + | chr1.4:42328305-42328324 | None:intergenic | 25.0% |
| !!! | ACACTTTTTTTCATTGAATG+TGG | - | chr1.4:42327577-42327596 | MS.gene78643:intron | 25.0% |
| !!! | ATTTTGAAGTTCAAACACAA+AGG | + | chr1.4:42330446-42330465 | None:intergenic | 25.0% |
| !!! | CTTTAGTTTATCTTTTGTTC+TGG | - | chr1.4:42330919-42330938 | MS.gene78643:intron | 25.0% |
| !!! | TCCATTTTTTAAAGTAGTCA+AGG | + | chr1.4:42330187-42330206 | None:intergenic | 25.0% |
| !!! | TCTTTTGTTTGAAAATGGAT+CGG | - | chr1.4:42329880-42329899 | MS.gene78643:intron | 25.0% |
| !!! | TTTTGAAGTTCAAACACAAA+GGG | + | chr1.4:42330445-42330464 | None:intergenic | 25.0% |
| AAAAGAAAACAATGTGTCGA+AGG | + | chr1.4:42330099-42330118 | None:intergenic | 30.0% | |
| ACATGTATCAGTATTGTGTT+CGG | + | chr1.4:42332267-42332286 | None:intergenic | 30.0% | |
| ACTCATACATACTTGATCTA+CGG | - | chr1.4:42331111-42331130 | MS.gene78643:intron | 30.0% | |
| ACTTATTTGAGCTTATCTAC+TGG | - | chr1.4:42330757-42330776 | MS.gene78643:intron | 30.0% | |
| AGGTAAGTAAAGTCTAACTA+AGG | + | chr1.4:42331552-42331571 | None:intergenic | 30.0% | |
| ATCGATGTTTATTACATCGA+CGG | - | chr1.4:42328738-42328757 | MS.gene78643:intron | 30.0% | |
| ATGACTAAAAGAAATGCAAG+TGG | + | chr1.4:42331656-42331675 | None:intergenic | 30.0% | |
| ATGAGATTGACAGAAATGAA+AGG | + | chr1.4:42332400-42332419 | None:intergenic | 30.0% | |
| ATTAACAAACACGAGTATTC+AGG | + | chr1.4:42328466-42328485 | None:intergenic | 30.0% | |
| ATTACCATTTCAGTTTCACA+AGG | + | chr1.4:42329858-42329877 | None:intergenic | 30.0% | |
| ATTCAGGAAATGAAAAATCC+AGG | - | chr1.4:42331083-42331102 | MS.gene78643:CDS | 30.0% | |
| ATTTGGAAAAGGAAAGATTC+AGG | - | chr1.4:42331972-42331991 | MS.gene78643:intron | 30.0% | |
| CTCTCTCTTATGATTAGAAA+TGG | - | chr1.4:42327549-42327568 | MS.gene78643:intron | 30.0% | |
| CTTGAAAACTTATCTTCTCT+AGG | - | chr1.4:42330306-42330325 | MS.gene78643:intron | 30.0% | |
| CTTGTTTCATGATATTCCTT+TGG | + | chr1.4:42332073-42332092 | None:intergenic | 30.0% | |
| GAAGTAGTTAGAGATCAAAA+TGG | + | chr1.4:42330700-42330719 | None:intergenic | 30.0% | |
| GATCCTACATTTAATCATCA+AGG | - | chr1.4:42328603-42328622 | MS.gene78643:CDS | 30.0% | |
| GGACTAATAATTCTAGTGAA+AGG | + | chr1.4:42328901-42328920 | None:intergenic | 30.0% | |
| TACTAAGCAATATTTCCCAA+AGG | - | chr1.4:42332054-42332073 | MS.gene78643:intron | 30.0% | |
| TGCATCATACTAACATCTAT+TGG | - | chr1.4:42328689-42328708 | MS.gene78643:intron | 30.0% | |
| TTAACAAACACGAGTATTCA+GGG | + | chr1.4:42328465-42328484 | None:intergenic | 30.0% | |
| TTAGAGATCAAAATGGTAGT+TGG | + | chr1.4:42330693-42330712 | None:intergenic | 30.0% | |
| TTTCATTTCTGTCAATCTCA+TGG | - | chr1.4:42332399-42332418 | MS.gene78643:CDS | 30.0% | |
| ! | AATCCGAAATTCACCTTTTA+AGG | - | chr1.4:42327707-42327726 | MS.gene78643:intron | 30.0% |
| ! | CCTTACTTGTTAACCTTAAA+AGG | + | chr1.4:42327723-42327742 | None:intergenic | 30.0% |
| ! | GAATATCAGGGATTTAGAAT+CGG | - | chr1.4:42329337-42329356 | MS.gene78643:CDS | 30.0% |
| ! | GATTTTCTTTCTTTATGGGA+AGG | + | chr1.4:42328190-42328209 | None:intergenic | 30.0% |
| ! | GTAAGATACATTTGATGATC+CGG | + | chr1.4:42329188-42329207 | None:intergenic | 30.0% |
| ! | TAACACACTTTTCTATTGCT+TGG | + | chr1.4:42327626-42327645 | None:intergenic | 30.0% |
| ! | TACACTTTTGCTTGTAGATT+GGG | - | chr1.4:42328777-42328796 | MS.gene78643:CDS | 30.0% |
| ! | TTACCTGAAATTTTGTTGCA+GGG | - | chr1.4:42331222-42331241 | MS.gene78643:intron | 30.0% |
| ! | TTCATTTTCTTGGAAATAGG+GGG | - | chr1.4:42330150-42330169 | MS.gene78643:CDS | 30.0% |
| ! | TTTACCTGAAATTTTGTTGC+AGG | - | chr1.4:42331221-42331240 | MS.gene78643:intron | 30.0% |
| !! | AAACCTACCAAATTTGGTTT+TGG | + | chr1.4:42327271-42327290 | None:intergenic | 30.0% |
| !! | ACTTACTTTTGTTTCTTGGT+CGG | - | chr1.4:42328959-42328978 | MS.gene78643:intron | 30.0% |
| !! | CACTAATTTTAAAAGGAGGT+AGG | + | chr1.4:42329529-42329548 | None:intergenic | 30.0% |
| !! | CAGATTTGTTGATCTAAGAA+TGG | + | chr1.4:42329094-42329113 | None:intergenic | 30.0% |
| !! | CTTGTTTTCATAAGCTTTCT+AGG | - | chr1.4:42330852-42330871 | MS.gene78643:intron | 30.0% |
| !! | TCTCACTTACTTTTGTTTCT+TGG | - | chr1.4:42328955-42328974 | MS.gene78643:intron | 30.0% |
| !!! | CCTTTTAAGGTTAACAAGTA+AGG | - | chr1.4:42327720-42327739 | MS.gene78643:intron | 30.0% |
| !!! | GCAAAAAGTGCTTTTAGATT+TGG | - | chr1.4:42327415-42327434 | MS.gene78643:CDS | 30.0% |
| !!! | TTTGGTTTTGGTACTTTAGT+TGG | + | chr1.4:42327259-42327278 | None:intergenic | 30.0% |
| AAACTGGAAAAGCAACAGTA+AGG | + | chr1.4:42327501-42327520 | None:intergenic | 35.0% | |
| AAAGAACTCTTGTTGAAGCA+TGG | - | chr1.4:42328556-42328575 | MS.gene78643:CDS | 35.0% | |
| AACTAAGGATTGTTCTAGTC+AGG | + | chr1.4:42331537-42331556 | None:intergenic | 35.0% | |
| AACTGGAAAAGCAACAGTAA+GGG | + | chr1.4:42327500-42327519 | None:intergenic | 35.0% | |
| AAGAACTCTTGTTGAAGCAT+GGG | - | chr1.4:42328557-42328576 | MS.gene78643:CDS | 35.0% | |
| AATTCACCTTGCTAACATAG+AGG | + | chr1.4:42331703-42331722 | None:intergenic | 35.0% | |
| ACTAAGGATTGTTCTAGTCA+GGG | + | chr1.4:42331536-42331555 | None:intergenic | 35.0% | |
| AGGATCATAGCTCCAATATA+TGG | - | chr1.4:42329009-42329028 | MS.gene78643:intron | 35.0% | |
| ATAAATGTTGAGCCAAGAAC+AGG | - | chr1.4:42329394-42329413 | MS.gene78643:intron | 35.0% | |
| ATCATACATTGGACCATCAA+TGG | + | chr1.4:42330479-42330498 | None:intergenic | 35.0% | |
| ATGTCCATCGATCATATTGA+TGG | + | chr1.4:42331343-42331362 | None:intergenic | 35.0% | |
| ATTGGCATTCATCAAACTAG+CGG | + | chr1.4:42331849-42331868 | None:intergenic | 35.0% | |
| CACTAGAATTATTAGTCCGA+AGG | - | chr1.4:42328903-42328922 | MS.gene78643:intron | 35.0% | |
| CACTCTGTCAATAATCAATG+TGG | + | chr1.4:42331040-42331059 | None:intergenic | 35.0% | |
| CAGATCCAGTTAAATGTAAC+TGG | - | chr1.4:42328433-42328452 | MS.gene78643:intron | 35.0% | |
| CATGTATCAGTATTGTGTTC+GGG | + | chr1.4:42332266-42332285 | None:intergenic | 35.0% | |
| CCTGTTGAGGAAACAAAAAT+TGG | + | chr1.4:42331867-42331886 | None:intergenic | 35.0% | |
| GAAAATGACAAAACCCATGT+TGG | - | chr1.4:42328236-42328255 | MS.gene78643:intron | 35.0% | |
| GAACACAATACTGATACATG+TGG | - | chr1.4:42332266-42332285 | MS.gene78643:intron | 35.0% | |
| GATGGTCCAATGTATGATTT+AGG | - | chr1.4:42330481-42330500 | MS.gene78643:intron | 35.0% | |
| GGAAACAAACCTACCAAATT+TGG | + | chr1.4:42327277-42327296 | None:intergenic | 35.0% | |
| GGAACTATCAACCAAAGATA+AGG | - | chr1.4:42332577-42332596 | MS.gene78643:CDS | 35.0% | |
| GGGAACAAAACATTTGGAAA+AGG | - | chr1.4:42331961-42331980 | MS.gene78643:intron | 35.0% | |
| GTACCAAAACCAAATTTGGT+AGG | - | chr1.4:42327265-42327284 | MS.gene78643:CDS | 35.0% | |
| GTCAATAATCAATGTGGTAC+AGG | + | chr1.4:42331034-42331053 | None:intergenic | 35.0% | |
| GTTACTACCAACAACAACAT+GGG | - | chr1.4:42327309-42327328 | MS.gene78643:CDS | 35.0% | |
| TAAGTGTGATAATACTCGCA+GGG | - | chr1.4:42328409-42328428 | MS.gene78643:intron | 35.0% | |
| TACAAACTCTTATATCCGTG+AGG | - | chr1.4:42330342-42330361 | MS.gene78643:intron | 35.0% | |
| TAGTCCTTGTGAAACTGAAA+TGG | - | chr1.4:42329851-42329870 | MS.gene78643:intron | 35.0% | |
| TATGAAGTTGCAGCAAACAA+TGG | - | chr1.4:42328801-42328820 | MS.gene78643:CDS | 35.0% | |
| TCGTACTTACAGGAATATCA+GGG | - | chr1.4:42329325-42329344 | MS.gene78643:CDS | 35.0% | |
| TGGAACAACTGTTACAGTAA+AGG | - | chr1.4:42329970-42329989 | MS.gene78643:CDS | 35.0% | |
| TGGATATGAAGGATTCCAAA+GGG | - | chr1.4:42332654-42332673 | MS.gene78643:CDS | 35.0% | |
| TGTCCATCGATCATATTGAT+GGG | + | chr1.4:42331342-42331361 | None:intergenic | 35.0% | |
| TGTCCGAAACTAACACATAT+CGG | - | chr1.4:42332233-42332252 | MS.gene78643:intron | 35.0% | |
| TGTGGTACAGGATAAGTTTA+TGG | + | chr1.4:42331022-42331041 | None:intergenic | 35.0% | |
| TTCATCTCCTTGATGAATAC+CGG | + | chr1.4:42329723-42329742 | None:intergenic | 35.0% | |
| TTCGTACTTACAGGAATATC+AGG | - | chr1.4:42329324-42329343 | MS.gene78643:CDS | 35.0% | |
| TTGGATATGAAGGATTCCAA+AGG | - | chr1.4:42332653-42332672 | MS.gene78643:CDS | 35.0% | |
| TTGGCTCAACATTTATGAAG+AGG | + | chr1.4:42329390-42329409 | None:intergenic | 35.0% | |
| ! | ACTCTTATGGAAAACTTGCT+TGG | + | chr1.4:42332132-42332151 | None:intergenic | 35.0% |
| ! | AGAACATGAGTTGGATATGA+AGG | - | chr1.4:42332643-42332662 | MS.gene78643:CDS | 35.0% |
| ! | ATTTTGCCACTGTAACAAAG+AGG | + | chr1.4:42332475-42332494 | None:intergenic | 35.0% |
| ! | GTACACTTTTGCTTGTAGAT+TGG | - | chr1.4:42328776-42328795 | MS.gene78643:CDS | 35.0% |
| ! | TCATTTTCTTGGAAATAGGG+GGG | - | chr1.4:42330151-42330170 | MS.gene78643:CDS | 35.0% |
| ! | TTTCAGTTTTACCACGTCTT+TGG | - | chr1.4:42331166-42331185 | MS.gene78643:intron | 35.0% |
| ! | TTTTGCCACTGTAACAAAGA+GGG | + | chr1.4:42332474-42332493 | None:intergenic | 35.0% |
| !! | CCAATTTTTGTTTCCTCAAC+AGG | - | chr1.4:42331864-42331883 | MS.gene78643:intron | 35.0% |
| !! | CTTAATGGCATTGATAGTGA+AGG | - | chr1.4:42329920-42329939 | MS.gene78643:CDS | 35.0% |
| !! | TCTTTGGTTGATAGTTCCTT+TGG | + | chr1.4:42332575-42332594 | None:intergenic | 35.0% |
| !! | TGTATGATAGAGAGTGCTTA+TGG | - | chr1.4:42330212-42330231 | MS.gene78643:intron | 35.0% |
| !! | TGTCAGCAACACTTTAGAAT+AGG | + | chr1.4:42329046-42329065 | None:intergenic | 35.0% |
| !!! | CATTCCACTGATTTTTGTGT+AGG | + | chr1.4:42328860-42328879 | None:intergenic | 35.0% |
| AAAATGGATCGGATTCTGCA+GGG | - | chr1.4:42329891-42329910 | MS.gene78643:intron | 40.0% | |
| AATGGTCGAGCTATTCTTGT+GGG | - | chr1.4:42331940-42331959 | MS.gene78643:intron | 40.0% | |
| AGAACTCTTGTTGAAGCATG+GGG | - | chr1.4:42328558-42328577 | MS.gene78643:CDS | 40.0% | |
| AGCCCTAATAATCCCATGTT+CGG | + | chr1.4:42331580-42331599 | None:intergenic | 40.0% | |
| AGGTTAACAAGTAAGGTGTG+TGG | - | chr1.4:42327727-42327746 | MS.gene78643:intron | 40.0% | |
| AGTGGAATGCTTTCTACACT+TGG | - | chr1.4:42328871-42328890 | MS.gene78643:intron | 40.0% | |
| ATCATGCCTCTATGTTAGCA+AGG | - | chr1.4:42331694-42331713 | MS.gene78643:intron | 40.0% | |
| ATCCGGCGATTATAGTTCAT+TGG | + | chr1.4:42329171-42329190 | None:intergenic | 40.0% | |
| ATCTACTACACCTGTTTCGA+GGG | + | chr1.4:42331609-42331628 | None:intergenic | 40.0% | |
| CACATGATCCACAAGTGATT+GGG | - | chr1.4:42331448-42331467 | MS.gene78643:intron | 40.0% | |
| CAGTACCAACATGTCTTTGT+CGG | - | chr1.4:42332324-42332343 | MS.gene78643:intron | 40.0% | |
| CGACTGTATGATAGAACTTG+TGG | - | chr1.4:42330794-42330813 | MS.gene78643:intron | 40.0% | |
| CGGATCCAGTTACATTTAAC+TGG | + | chr1.4:42328441-42328460 | None:intergenic | 40.0% | |
| CTAAGTGTGATAATACTCGC+AGG | - | chr1.4:42328408-42328427 | MS.gene78643:intron | 40.0% | |
| CTTCATGACATAGATCAGGT+CGG | - | chr1.4:42332509-42332528 | MS.gene78643:CDS | 40.0% | |
| CTTGTGGGGAACAAAACATT+TGG | - | chr1.4:42331955-42331974 | MS.gene78643:intron | 40.0% | |
| GAAATTGTCAACCTTCTCTC+AGG | - | chr1.4:42330601-42330620 | MS.gene78643:intron | 40.0% | |
| GACAGAAATGAAAGGAGTCT+CGG | + | chr1.4:42332392-42332411 | None:intergenic | 40.0% | |
| GACAGAAATGCTTTCACCAA+AGG | - | chr1.4:42332556-42332575 | MS.gene78643:CDS | 40.0% | |
| GACCGAACATGGGATTATTA+GGG | - | chr1.4:42331575-42331594 | MS.gene78643:intron | 40.0% | |
| GACCTGATCTATGTCATGAA+GGG | + | chr1.4:42332510-42332529 | None:intergenic | 40.0% | |
| GGAAGCAGATTCATGCATTA+TGG | - | chr1.4:42332616-42332635 | MS.gene78643:CDS | 40.0% | |
| GGAATGATGGCACTTGATAT+TGG | + | chr1.4:42330539-42330558 | None:intergenic | 40.0% | |
| GGTTAACAAGTAAGGTGTGT+GGG | - | chr1.4:42327728-42327747 | MS.gene78643:intron | 40.0% | |
| GGTTACTACCAACAACAACA+TGG | - | chr1.4:42327308-42327327 | MS.gene78643:CDS | 40.0% | |
| GTACTCACAATCACTACAAG+TGG | + | chr1.4:42331381-42331400 | None:intergenic | 40.0% | |
| GTCATTCTTGTATGTTTCCC+TGG | - | chr1.4:42331671-42331690 | MS.gene78643:intron | 40.0% | |
| GTGAATACGATCGATAGAGA+TGG | - | chr1.4:42331306-42331325 | MS.gene78643:CDS | 40.0% | |
| GTGTGTACCAAGCATATTGA+CGG | - | chr1.4:42332168-42332187 | MS.gene78643:intron | 40.0% | |
| GTTAACAAGTAAGGTGTGTG+GGG | - | chr1.4:42327729-42327748 | MS.gene78643:intron | 40.0% | |
| GTTTGTTTCCTCGTAGGTTA+TGG | - | chr1.4:42327287-42327306 | MS.gene78643:CDS | 40.0% | |
| TAACGGTGATTCGTACTTAC+AGG | - | chr1.4:42329315-42329334 | MS.gene78643:CDS | 40.0% | |
| TAATAATCCCATGTTCGGTC+AGG | + | chr1.4:42331575-42331594 | None:intergenic | 40.0% | |
| TAATGGTCGAGCTATTCTTG+TGG | - | chr1.4:42331939-42331958 | MS.gene78643:intron | 40.0% | |
| TATCTACTACACCTGTTTCG+AGG | + | chr1.4:42331610-42331629 | None:intergenic | 40.0% | |
| TATGGTAGCAGAACATGAGT+TGG | - | chr1.4:42332634-42332653 | MS.gene78643:CDS | 40.0% | |
| TCACCCATCAATATGATCGA+TGG | - | chr1.4:42331336-42331355 | MS.gene78643:CDS | 40.0% | |
| TCGACGGATCAAATAACAAG+AGG | - | chr1.4:42328754-42328773 | MS.gene78643:intron | 40.0% | |
| TGAAGAGAAGGAGGTGAATA+AGG | - | chr1.4:42327363-42327382 | MS.gene78643:CDS | 40.0% | |
| TGACATGCGAAATGCTATTC+AGG | - | chr1.4:42331067-42331086 | MS.gene78643:CDS | 40.0% | |
| TGACCGAACATGGGATTATT+AGG | - | chr1.4:42331574-42331593 | MS.gene78643:intron | 40.0% | |
| TGCCAATGAACTATAATCGC+CGG | - | chr1.4:42329166-42329185 | MS.gene78643:intron | 40.0% | |
| TGTATAATATACGAAGGGGC+TGG | + | chr1.4:42327761-42327780 | None:intergenic | 40.0% | |
| TTCATGACATAGATCAGGTC+GGG | - | chr1.4:42332510-42332529 | MS.gene78643:CDS | 40.0% | |
| TTGAAGCATGGGGTTTGATT+CGG | - | chr1.4:42328568-42328587 | MS.gene78643:CDS | 40.0% | |
| ! | AAACCCTTTTCGACTAAGCA+CGG | + | chr1.4:42328515-42328534 | None:intergenic | 40.0% |
| ! | AATTTTGTTGCAGGGTGGTT+TGG | - | chr1.4:42331230-42331249 | MS.gene78643:intron | 40.0% |
| ! | CATTTTCTTGGAAATAGGGG+GGG | - | chr1.4:42330152-42330171 | MS.gene78643:CDS | 40.0% |
| ! | GCACCGATATGTGTTAGTTT+CGG | + | chr1.4:42332239-42332258 | None:intergenic | 40.0% |
| ! | GGATTTAGAATCGGAAGTGA+TGG | - | chr1.4:42329346-42329365 | MS.gene78643:CDS | 40.0% |
| ! | GTTTTACCACGTCTTTGGAT+CGG | - | chr1.4:42331171-42331190 | MS.gene78643:intron | 40.0% |
| ! | TAACATAGAGGCATGATCCA+GGG | + | chr1.4:42331691-42331710 | None:intergenic | 40.0% |
| ! | TGAGATTGAGGCCTTATCTT+TGG | + | chr1.4:42332591-42332610 | None:intergenic | 40.0% |
| AAATGGATCGGATTCTGCAG+GGG | - | chr1.4:42329892-42329911 | MS.gene78643:intron | 45.0% | |
| AAGAGAACAGACACGACCAT+TGG | + | chr1.4:42332358-42332377 | None:intergenic | 45.0% | |
| ACACCTACCGTCAATATGCT+TGG | + | chr1.4:42332178-42332197 | None:intergenic | 45.0% | |
| ACCACATCTGAGCAACATCA+AGG | + | chr1.4:42331266-42331285 | None:intergenic | 45.0% | |
| AGCCCTTCATGACATAGATC+AGG | - | chr1.4:42332505-42332524 | MS.gene78643:CDS | 45.0% | |
| AGTATGTATGAGTGAGCTCC+TGG | + | chr1.4:42331104-42331123 | None:intergenic | 45.0% | |
| ATCAGCCCTCTTTGTTACAG+TGG | - | chr1.4:42332466-42332485 | MS.gene78643:CDS | 45.0% | |
| ATGGTCGAGCTATTCTTGTG+GGG | - | chr1.4:42331941-42331960 | MS.gene78643:intron | 45.0% | |
| ATTCCTCACAGATCCTCAGA+AGG | - | chr1.4:42330554-42330573 | MS.gene78643:intron | 45.0% | |
| CAAACACGAGTATTCAGGGA+CGG | + | chr1.4:42328461-42328480 | None:intergenic | 45.0% | |
| CAACAACAACATGGGCATCA+CGG | - | chr1.4:42327317-42327336 | MS.gene78643:CDS | 45.0% | |
| CCAAACATGCCTTCAATCTG+AGG | + | chr1.4:42332213-42332232 | None:intergenic | 45.0% | |
| CCAATCACTTGTGGATCATG+TGG | + | chr1.4:42331450-42331469 | None:intergenic | 45.0% | |
| CCACATGATCCACAAGTGAT+TGG | - | chr1.4:42331447-42331466 | MS.gene78643:intron | 45.0% | |
| CCACCCTGCAACAAAATTTC+AGG | + | chr1.4:42331228-42331247 | None:intergenic | 45.0% | |
| CGACAAAGACATGTTGGTAC+TGG | + | chr1.4:42332326-42332345 | None:intergenic | 45.0% | |
| CGACCTGATCTATGTCATGA+AGG | + | chr1.4:42332511-42332530 | None:intergenic | 45.0% | |
| CTACACCGACAAAGACATGT+TGG | + | chr1.4:42332332-42332351 | None:intergenic | 45.0% | |
| CTGACCAAATGTCCTGTTCT+TGG | + | chr1.4:42329409-42329428 | None:intergenic | 45.0% | |
| GAAAATGGATCGGATTCTGC+AGG | - | chr1.4:42329890-42329909 | MS.gene78643:intron | 45.0% | |
| GAACCGTGCTTAGTCGAAAA+GGG | - | chr1.4:42328509-42328528 | MS.gene78643:intron | 45.0% | |
| GAAGGAGGTGAATAAGGTAG+TGG | - | chr1.4:42327369-42327388 | MS.gene78643:CDS | 45.0% | |
| GAAGGGCAGGTCATAAAAAC+TGG | - | chr1.4:42330572-42330591 | MS.gene78643:intron | 45.0% | |
| GAAGTTGCAGCAAACAATGG+TGG | - | chr1.4:42328804-42328823 | MS.gene78643:CDS | 45.0% | |
| GAGAGCTTGATATACTCCCT+TGG | + | chr1.4:42330515-42330534 | None:intergenic | 45.0% | |
| GCAGCCTACACAAAAATCAG+TGG | - | chr1.4:42328853-42328872 | MS.gene78643:intron | 45.0% | |
| GGTAGTAACCATAACCTACG+AGG | + | chr1.4:42327298-42327317 | None:intergenic | 45.0% | |
| GTACCAAGCATATTGACGGT+AGG | - | chr1.4:42332172-42332191 | MS.gene78643:intron | 45.0% | |
| GTTAGATGGAGATGAGACTC+TGG | - | chr1.4:42331284-42331303 | MS.gene78643:CDS | 45.0% | |
| GTTGCTCAGATGTGGTTAGA+TGG | - | chr1.4:42331270-42331289 | MS.gene78643:intron | 45.0% | |
| TAAGGCCTCAATCTCATCTC+TGG | - | chr1.4:42332595-42332614 | MS.gene78643:CDS | 45.0% | |
| TCTAGTCAGGGTCTAGACAT+TGG | + | chr1.4:42331524-42331543 | None:intergenic | 45.0% | |
| TGAACCGTGCTTAGTCGAAA+AGG | - | chr1.4:42328508-42328527 | MS.gene78643:intron | 45.0% | |
| TGAAGCATGGGGTTTGATTC+GGG | - | chr1.4:42328569-42328588 | MS.gene78643:CDS | 45.0% | |
| TGAGCCAAGAACAGGACATT+TGG | - | chr1.4:42329402-42329421 | MS.gene78643:intron | 45.0% | |
| TGAGGATCTGTGAGGAATGA+TGG | + | chr1.4:42330552-42330571 | None:intergenic | 45.0% | |
| TGATCTATGTCATGAAGGGC+TGG | + | chr1.4:42332506-42332525 | None:intergenic | 45.0% | |
| TGCTTCCAGAGATGAGATTG+AGG | + | chr1.4:42332603-42332622 | None:intergenic | 45.0% | |
| TTCCTCACAGATCCTCAGAA+GGG | - | chr1.4:42330555-42330574 | MS.gene78643:intron | 45.0% | |
| TTTCCTCAACAGGTCAACGA+GGG | - | chr1.4:42331874-42331893 | MS.gene78643:intron | 45.0% | |
| TTTGTCGGTGTAGTGTCCAA+TGG | - | chr1.4:42332339-42332358 | MS.gene78643:intron | 45.0% | |
| ! | AGTGTCACTCAGCTTCATGA+TGG | - | chr1.4:42332443-42332462 | MS.gene78643:CDS | 45.0% |
| ! | ATGCCTTCAATCTGAGGTGT+TGG | + | chr1.4:42332207-42332226 | None:intergenic | 45.0% |
| ! | CCTCAGATTGAAGGCATGTT+TGG | - | chr1.4:42332210-42332229 | MS.gene78643:intron | 45.0% |
| ! | CCTGAAATTTTGTTGCAGGG+TGG | - | chr1.4:42331225-42331244 | MS.gene78643:intron | 45.0% |
| ! | CTAACATAGAGGCATGATCC+AGG | + | chr1.4:42331692-42331711 | None:intergenic | 45.0% |
| ! | GGAAGTGATGGAAACTTGCA+GGG | - | chr1.4:42329358-42329377 | MS.gene78643:CDS | 45.0% |
| ! | GGTGAATAAGGTAGTGGTAG+TGG | - | chr1.4:42327375-42327394 | MS.gene78643:CDS | 45.0% |
| ! | GTCGTTTGAGGTTGAAGAGA+AGG | - | chr1.4:42327351-42327370 | MS.gene78643:CDS | 45.0% |
| ! | GTTTGAGGTTGAAGAGAAGG+AGG | - | chr1.4:42327354-42327373 | MS.gene78643:CDS | 45.0% |
| ! | TCTTGGTAGCAGCTAGAACT+CGG | - | chr1.4:42329576-42329595 | MS.gene78643:intron | 45.0% |
| ! | TGGTAGGTTTGTTTCCTCGT+AGG | - | chr1.4:42327281-42327300 | MS.gene78643:CDS | 45.0% |
| ! | TTTTATGACCTGCCCTTCTG+AGG | + | chr1.4:42330570-42330589 | None:intergenic | 45.0% |
| !! | GTCGAAAAGGGTTTGTTGCT+AGG | - | chr1.4:42328521-42328540 | MS.gene78643:CDS | 45.0% |
| !!! | ATTTTTTTTATTAAAAATCA+CGG | + | chr1.4:42332029-42332048 | None:intergenic | 5.0% |
| AAGTGATTGGGTCGCTCAAG+TGG | - | chr1.4:42331460-42331479 | MS.gene78643:intron | 50.0% | |
| ACTTACCTCCTGACCGAACA+TGG | - | chr1.4:42331564-42331583 | MS.gene78643:intron | 50.0% | |
| AGGGATTGAGAGAGAGCTGT+AGG | + | chr1.4:42327481-42327500 | None:intergenic | 50.0% | |
| CGTGATGCCCATGTTGTTGT+TGG | + | chr1.4:42327319-42327338 | None:intergenic | 50.0% | |
| CTTACCTCCTGACCGAACAT+GGG | - | chr1.4:42331565-42331584 | MS.gene78643:intron | 50.0% | |
| GAGATATACGAGCTGACCTC+AGG | + | chr1.4:42327532-42327551 | None:intergenic | 50.0% | |
| GATGGAAACTTGCAGGGAGT+TGG | - | chr1.4:42329364-42329383 | MS.gene78643:CDS | 50.0% | |
| GCCTTGATGTTGCTCAGATG+TGG | - | chr1.4:42331262-42331281 | MS.gene78643:intron | 50.0% | |
| GCTCCAACACCTCAGATTGA+AGG | - | chr1.4:42332201-42332220 | MS.gene78643:intron | 50.0% | |
| GCTGCATCAGCTGAGTTCAA+AGG | + | chr1.4:42328838-42328857 | None:intergenic | 50.0% | |
| GTTACACCGATCCAAAGACG+TGG | + | chr1.4:42331180-42331199 | None:intergenic | 50.0% | |
| GTTTCCTCAACAGGTCAACG+AGG | - | chr1.4:42331873-42331892 | MS.gene78643:intron | 50.0% | |
| TAATCCCATGTTCGGTCAGG+AGG | + | chr1.4:42331572-42331591 | None:intergenic | 50.0% | |
| TCTTCTGCTCACCTGAGAGA+AGG | + | chr1.4:42330615-42330634 | None:intergenic | 50.0% | |
| TTGAGCGACCCAATCACTTG+TGG | + | chr1.4:42331459-42331478 | None:intergenic | 50.0% | |
| ! | ATAGTGAAGGTGCAGCACAG+AGG | - | chr1.4:42329933-42329952 | MS.gene78643:CDS | 50.0% |
| ! | CGGAAGTGATGGAAACTTGC+AGG | - | chr1.4:42329357-42329376 | MS.gene78643:CDS | 50.0% |
| ! | GCTGGGGCGTTACATGATAA+TGG | - | chr1.4:42331922-42331941 | MS.gene78643:intron | 50.0% |
| ! | GGCTCATTTTCCCTCGAAAC+AGG | - | chr1.4:42331596-42331615 | MS.gene78643:intron | 50.0% |
| !! | AGTGCCAGCGAGATTTTAGC+TGG | - | chr1.4:42331904-42331923 | MS.gene78643:intron | 50.0% |
| !! | CAGGGTGGTTTGGTAAAAGC+AGG | - | chr1.4:42331240-42331259 | MS.gene78643:intron | 50.0% |
| !! | GAAGAGGAAGGTGTCGTTTG+AGG | - | chr1.4:42327339-42327358 | MS.gene78643:CDS | 50.0% |
| !!! | GTGCCAGCGAGATTTTAGCT+GGG | - | chr1.4:42331905-42331924 | MS.gene78643:intron | 50.0% |
| !!! | TGCCAGCGAGATTTTAGCTG+GGG | - | chr1.4:42331906-42331925 | MS.gene78643:intron | 50.0% |
| ATGGGCATCACGGAAGAGGA+AGG | - | chr1.4:42327327-42327346 | MS.gene78643:CDS | 55.0% | |
| CAACATGGGCATCACGGAAG+AGG | - | chr1.4:42327323-42327342 | MS.gene78643:CDS | 55.0% | |
| CAGAGGCTTAGAGGGAATGC+TGG | - | chr1.4:42329950-42329969 | MS.gene78643:CDS | 55.0% | |
| CTTCCCTCGTTGACCTGTTG+AGG | + | chr1.4:42331880-42331899 | None:intergenic | 55.0% | |
| GTGCAGCACAGAGGCTTAGA+GGG | - | chr1.4:42329942-42329961 | MS.gene78643:CDS | 55.0% | |
| TCACAGATCCTCAGAAGGGC+AGG | - | chr1.4:42330559-42330578 | MS.gene78643:intron | 55.0% | |
| TCTGCAGGGGAGAGGCTTAA+TGG | - | chr1.4:42329905-42329924 | MS.gene78643:intron | 55.0% | |
| TCTGTCGTGCACTGAACGTC+TGG | + | chr1.4:42332542-42332561 | None:intergenic | 55.0% | |
| ! | GCTCGTGCCGGTATTCATCA+AGG | - | chr1.4:42329713-42329732 | MS.gene78643:intron | 55.0% |
| ! | TGCCCTTCTGAGGATCTGTG+AGG | + | chr1.4:42330560-42330579 | None:intergenic | 55.0% |
| AACAGTCCAGCTGCTCGTGC+CGG | - | chr1.4:42329701-42329720 | MS.gene78643:intron | 60.0% | |
| ACCTCAGGTGCGCGTGAAAC+TGG | + | chr1.4:42327517-42327536 | None:intergenic | 60.0% | |
| CGCCCCAGCTAAAATCTCGC+TGG | + | chr1.4:42331911-42331930 | None:intergenic | 60.0% | |
| GATCGGATTCTGCAGGGGAG+AGG | - | chr1.4:42329897-42329916 | MS.gene78643:intron | 60.0% | |
| GGTGCAGCACAGAGGCTTAG+AGG | - | chr1.4:42329941-42329960 | MS.gene78643:CDS | 60.0% | |
| TCCAGTTTCACGCGCACCTG+AGG | - | chr1.4:42327513-42327532 | MS.gene78643:intron | 60.0% | |
| TGAATACCGGCACGAGCAGC+TGG | + | chr1.4:42329710-42329729 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 42327220 | 42332688 | 42327220 | ID=MS.gene78643 |
| chr1.4 | mRNA | 42327220 | 42332688 | 42327220 | ID=MS.gene78643.t1;Parent=MS.gene78643 |
| chr1.4 | exon | 42332374 | 42332688 | 42332374 | ID=MS.gene78643.t1.exon1;Parent=MS.gene78643.t1 |
| chr1.4 | CDS | 42332374 | 42332688 | 42332374 | ID=cds.MS.gene78643.t1;Parent=MS.gene78643.t1 |
| chr1.4 | exon | 42331284 | 42331365 | 42331284 | ID=MS.gene78643.t1.exon2;Parent=MS.gene78643.t1 |
| chr1.4 | CDS | 42331284 | 42331365 | 42331284 | ID=cds.MS.gene78643.t1;Parent=MS.gene78643.t1 |
| chr1.4 | exon | 42330984 | 42331114 | 42330984 | ID=MS.gene78643.t1.exon3;Parent=MS.gene78643.t1 |
| chr1.4 | CDS | 42330984 | 42331114 | 42330984 | ID=cds.MS.gene78643.t1;Parent=MS.gene78643.t1 |
| chr1.4 | exon | 42330485 | 42330571 | 42330485 | ID=MS.gene78643.t1.exon4;Parent=MS.gene78643.t1 |
| chr1.4 | CDS | 42330485 | 42330571 | 42330485 | ID=cds.MS.gene78643.t1;Parent=MS.gene78643.t1 |
| chr1.4 | exon | 42330150 | 42330228 | 42330150 | ID=MS.gene78643.t1.exon5;Parent=MS.gene78643.t1 |
| chr1.4 | CDS | 42330150 | 42330228 | 42330150 | ID=cds.MS.gene78643.t1;Parent=MS.gene78643.t1 |
| chr1.4 | exon | 42329917 | 42329996 | 42329917 | ID=MS.gene78643.t1.exon6;Parent=MS.gene78643.t1 |
| chr1.4 | CDS | 42329917 | 42329996 | 42329917 | ID=cds.MS.gene78643.t1;Parent=MS.gene78643.t1 |
| chr1.4 | exon | 42329545 | 42329580 | 42329545 | ID=MS.gene78643.t1.exon7;Parent=MS.gene78643.t1 |
| chr1.4 | CDS | 42329545 | 42329580 | 42329545 | ID=cds.MS.gene78643.t1;Parent=MS.gene78643.t1 |
| chr1.4 | exon | 42329286 | 42329405 | 42329286 | ID=MS.gene78643.t1.exon8;Parent=MS.gene78643.t1 |
| chr1.4 | CDS | 42329286 | 42329405 | 42329286 | ID=cds.MS.gene78643.t1;Parent=MS.gene78643.t1 |
| chr1.4 | exon | 42328766 | 42328852 | 42328766 | ID=MS.gene78643.t1.exon9;Parent=MS.gene78643.t1 |
| chr1.4 | CDS | 42328766 | 42328852 | 42328766 | ID=cds.MS.gene78643.t1;Parent=MS.gene78643.t1 |
| chr1.4 | exon | 42328516 | 42328665 | 42328516 | ID=MS.gene78643.t1.exon10;Parent=MS.gene78643.t1 |
| chr1.4 | CDS | 42328516 | 42328665 | 42328516 | ID=cds.MS.gene78643.t1;Parent=MS.gene78643.t1 |
| chr1.4 | exon | 42327915 | 42328022 | 42327915 | ID=MS.gene78643.t1.exon11;Parent=MS.gene78643.t1 |
| chr1.4 | CDS | 42327915 | 42328022 | 42327915 | ID=cds.MS.gene78643.t1;Parent=MS.gene78643.t1 |
| chr1.4 | exon | 42327220 | 42327465 | 42327220 | ID=MS.gene78643.t1.exon12;Parent=MS.gene78643.t1 |
| chr1.4 | CDS | 42327220 | 42327465 | 42327220 | ID=cds.MS.gene78643.t1;Parent=MS.gene78643.t1 |
| Gene Sequence |
| Protein sequence |
