Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55401.t1 | XP_003614051.1 | 99.6 | 259 | 1 | 0 | 1 | 259 | 1 | 259 | 7.40E-137 | 496.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55401.t1 | Q9C5W6 | 86.1 | 251 | 35 | 0 | 3 | 253 | 6 | 256 | 1.3e-116 | 420.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55401.t1 | G7JWT4 | 99.6 | 259 | 1 | 0 | 1 | 259 | 1 | 259 | 5.4e-137 | 496.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049251 | MS.gene55401 | 0.802214 | 6.24E-49 | -1.69E-46 |
| MS.gene049596 | MS.gene55401 | 0.805602 | 1.23E-49 | -1.69E-46 |
| MS.gene050874 | MS.gene55401 | 0.823857 | 1.10E-53 | -1.69E-46 |
| MS.gene050875 | MS.gene55401 | 0.852394 | 4.75E-61 | -1.69E-46 |
| MS.gene051025 | MS.gene55401 | 0.820777 | 5.73E-53 | -1.69E-46 |
| MS.gene05124 | MS.gene55401 | 0.818297 | 2.11E-52 | -1.69E-46 |
| MS.gene051914 | MS.gene55401 | 0.863193 | 2.96E-64 | -1.69E-46 |
| MS.gene052143 | MS.gene55401 | 0.803767 | 2.98E-49 | -1.69E-46 |
| MS.gene052169 | MS.gene55401 | 0.846738 | 1.80E-59 | -1.69E-46 |
| MS.gene052209 | MS.gene55401 | 0.801804 | 7.57E-49 | -1.69E-46 |
| MS.gene052308 | MS.gene55401 | 0.819006 | 1.46E-52 | -1.69E-46 |
| MS.gene052367 | MS.gene55401 | 0.825223 | 5.27E-54 | -1.69E-46 |
| MS.gene052494 | MS.gene55401 | 0.823643 | 1.24E-53 | -1.69E-46 |
| MS.gene053173 | MS.gene55401 | 0.867014 | 1.87E-65 | -1.69E-46 |
| MS.gene054018 | MS.gene55401 | 0.839695 | 1.36E-57 | -1.69E-46 |
| MS.gene054459 | MS.gene55401 | 0.854654 | 1.07E-61 | -1.69E-46 |
| MS.gene054551 | MS.gene55401 | 0.858248 | 9.38E-63 | -1.69E-46 |
| MS.gene054593 | MS.gene55401 | 0.838247 | 3.22E-57 | -1.69E-46 |
| MS.gene054633 | MS.gene55401 | 0.8461 | 2.69E-59 | -1.69E-46 |
| MS.gene054662 | MS.gene55401 | 0.961802 | 3.98E-120 | -1.69E-46 |
| MS.gene055308 | MS.gene55401 | 0.818369 | 2.03E-52 | -1.69E-46 |
| MS.gene055578 | MS.gene55401 | 0.816102 | 6.57E-52 | -1.69E-46 |
| MS.gene056041 | MS.gene55401 | 0.804537 | 2.06E-49 | -1.69E-46 |
| MS.gene05640 | MS.gene55401 | 0.852277 | 5.13E-61 | -1.69E-46 |
| MS.gene056488 | MS.gene55401 | 0.80179 | 7.63E-49 | -1.69E-46 |
| MS.gene05652 | MS.gene55401 | 0.833149 | 6.29E-56 | -1.69E-46 |
| MS.gene057165 | MS.gene55401 | 0.819068 | 1.41E-52 | -1.69E-46 |
| MS.gene05732 | MS.gene55401 | 0.84575 | 3.34E-59 | -1.69E-46 |
| MS.gene057367 | MS.gene55401 | 0.88763 | 1.21E-72 | -1.69E-46 |
| MS.gene057458 | MS.gene55401 | 0.827 | 1.99E-54 | -1.69E-46 |
| MS.gene057669 | MS.gene55401 | 0.802177 | 6.35E-49 | -1.69E-46 |
| MS.gene058128 | MS.gene55401 | 0.802932 | 4.44E-49 | -1.69E-46 |
| MS.gene058853 | MS.gene55401 | 0.827787 | 1.29E-54 | -1.69E-46 |
| MS.gene059553 | MS.gene55401 | 0.802743 | 4.85E-49 | -1.69E-46 |
| MS.gene059616 | MS.gene55401 | 0.812152 | 4.89E-51 | -1.69E-46 |
| MS.gene060291 | MS.gene55401 | 0.836678 | 8.13E-57 | -1.69E-46 |
| MS.gene06080 | MS.gene55401 | 0.81676 | 4.68E-52 | -1.69E-46 |
| MS.gene06093 | MS.gene55401 | 0.892554 | 1.43E-74 | -1.69E-46 |
| MS.gene061260 | MS.gene55401 | 0.81792 | 2.57E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene55401 | MS.gene010179 | PPI |
| MS.gene55401 | MS.gene010180 | PPI |
| MS.gene55401 | MS.gene028807 | PPI |
| MS.gene55401 | MS.gene013047 | PPI |
| MS.gene55401 | MS.gene035837 | PPI |
| MS.gene55401 | MS.gene052176 | PPI |
| MS.gene55401 | MS.gene31370 | PPI |
| MS.gene48435 | MS.gene55401 | PPI |
| MS.gene055488 | MS.gene55401 | PPI |
| MS.gene020411 | MS.gene55401 | PPI |
| MS.gene55401 | MS.gene64150 | PPI |
| MS.gene013133 | MS.gene55401 | PPI |
| MS.gene55401 | MS.gene043907 | PPI |
| MS.gene55401 | MS.gene050079 | PPI |
| MS.gene55401 | MS.gene38593 | PPI |
| MS.gene043514 | MS.gene55401 | PPI |
| MS.gene54847 | MS.gene55401 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55401.t1 | MTR_5g044160 | 99.614 | 259 | 1 | 0 | 1 | 259 | 1 | 259 | 0.0 | 531 |
| MS.gene55401.t1 | MTR_4g083060 | 89.147 | 258 | 27 | 1 | 1 | 258 | 1 | 257 | 5.71e-174 | 481 |
| MS.gene55401.t1 | MTR_2g091225 | 75.502 | 249 | 60 | 1 | 1 | 249 | 1 | 248 | 1.69e-142 | 400 |
| MS.gene55401.t1 | MTR_8g086270 | 76.735 | 245 | 57 | 0 | 1 | 245 | 1 | 245 | 3.16e-141 | 397 |
| MS.gene55401.t1 | MTR_2g076960 | 73.790 | 248 | 65 | 0 | 2 | 249 | 3 | 250 | 1.40e-138 | 390 |
| MS.gene55401.t1 | MTR_2g015980 | 75.309 | 243 | 58 | 2 | 11 | 253 | 9 | 249 | 3.37e-135 | 382 |
| MS.gene55401.t1 | MTR_2g091225 | 76.000 | 225 | 53 | 1 | 25 | 249 | 2 | 225 | 2.74e-129 | 366 |
| MS.gene55401.t1 | MTR_3g099380 | 70.817 | 257 | 72 | 3 | 2 | 256 | 3 | 258 | 1.75e-127 | 362 |
| MS.gene55401.t1 | MTR_5g064580 | 68.627 | 255 | 75 | 2 | 2 | 254 | 3 | 254 | 6.30e-124 | 353 |
| MS.gene55401.t1 | MTR_3g100620 | 66.809 | 235 | 75 | 1 | 7 | 238 | 11 | 245 | 2.16e-113 | 326 |
| MS.gene55401.t1 | MTR_3g099380 | 68.657 | 201 | 61 | 2 | 2 | 200 | 3 | 203 | 3.25e-95 | 278 |
| MS.gene55401.t1 | MTR_0137s0020 | 52.542 | 236 | 102 | 5 | 7 | 237 | 11 | 241 | 4.81e-74 | 226 |
| MS.gene55401.t1 | MTR_3g014060 | 52.119 | 236 | 103 | 5 | 7 | 237 | 11 | 241 | 3.06e-73 | 224 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55401.t1 | AT1G26480 | 84.231 | 260 | 36 | 1 | 2 | 256 | 5 | 264 | 1.11e-162 | 451 |
| MS.gene55401.t1 | AT1G34760 | 79.835 | 243 | 48 | 1 | 4 | 246 | 2 | 243 | 1.06e-143 | 403 |
| MS.gene55401.t1 | AT1G34760 | 79.835 | 243 | 48 | 1 | 4 | 246 | 2 | 243 | 1.19e-143 | 403 |
| MS.gene55401.t1 | AT2G42590 | 74.219 | 256 | 65 | 1 | 1 | 255 | 1 | 256 | 6.91e-141 | 396 |
| MS.gene55401.t1 | AT2G42590 | 74.219 | 256 | 65 | 1 | 1 | 255 | 1 | 256 | 7.30e-141 | 397 |
| MS.gene55401.t1 | AT2G42590 | 73.725 | 255 | 67 | 0 | 1 | 255 | 1 | 255 | 1.60e-139 | 392 |
| MS.gene55401.t1 | AT1G22300 | 74.400 | 250 | 64 | 0 | 4 | 253 | 2 | 251 | 2.06e-135 | 382 |
| MS.gene55401.t1 | AT1G22300 | 74.400 | 250 | 64 | 0 | 4 | 253 | 2 | 251 | 3.61e-135 | 381 |
| MS.gene55401.t1 | AT1G22300 | 76.250 | 240 | 57 | 0 | 4 | 243 | 2 | 241 | 6.60e-134 | 378 |
| MS.gene55401.t1 | AT1G35160 | 72.619 | 252 | 67 | 2 | 7 | 256 | 11 | 262 | 2.17e-127 | 362 |
| MS.gene55401.t1 | AT3G02520 | 71.705 | 258 | 65 | 3 | 7 | 256 | 5 | 262 | 3.07e-127 | 362 |
| MS.gene55401.t1 | AT3G02520 | 71.705 | 258 | 65 | 3 | 7 | 256 | 5 | 262 | 3.07e-127 | 362 |
| MS.gene55401.t1 | AT5G38480 | 71.429 | 252 | 70 | 2 | 7 | 256 | 4 | 255 | 5.13e-127 | 361 |
| MS.gene55401.t1 | AT1G78300 | 69.804 | 255 | 75 | 2 | 7 | 259 | 5 | 259 | 1.49e-125 | 357 |
| MS.gene55401.t1 | AT5G38480 | 72.800 | 250 | 63 | 4 | 7 | 254 | 4 | 250 | 2.47e-125 | 356 |
| MS.gene55401.t1 | AT5G38480 | 72.800 | 250 | 63 | 4 | 7 | 254 | 4 | 250 | 2.47e-125 | 356 |
| MS.gene55401.t1 | AT4G09000 | 71.138 | 246 | 69 | 2 | 2 | 245 | 5 | 250 | 4.37e-124 | 354 |
| MS.gene55401.t1 | AT1G35160 | 75.214 | 234 | 56 | 2 | 7 | 238 | 11 | 244 | 1.77e-123 | 353 |
| MS.gene55401.t1 | AT4G09000 | 72.803 | 239 | 63 | 2 | 2 | 238 | 5 | 243 | 1.28e-121 | 349 |
| MS.gene55401.t1 | AT5G16050 | 66.288 | 264 | 79 | 2 | 1 | 254 | 1 | 264 | 3.53e-120 | 344 |
| MS.gene55401.t1 | AT5G16050 | 66.288 | 264 | 79 | 2 | 1 | 254 | 1 | 264 | 3.53e-120 | 344 |
| MS.gene55401.t1 | AT5G65430 | 66.397 | 247 | 80 | 1 | 1 | 244 | 1 | 247 | 1.80e-115 | 331 |
| MS.gene55401.t1 | AT5G65430 | 66.803 | 244 | 78 | 1 | 1 | 241 | 1 | 244 | 1.94e-115 | 331 |
| MS.gene55401.t1 | AT5G65430 | 67.220 | 241 | 76 | 1 | 1 | 238 | 1 | 241 | 4.07e-114 | 328 |
| MS.gene55401.t1 | AT5G10450 | 65.021 | 243 | 82 | 1 | 1 | 240 | 1 | 243 | 2.56e-113 | 326 |
| MS.gene55401.t1 | AT5G10450 | 64.754 | 244 | 83 | 1 | 1 | 241 | 1 | 244 | 3.43e-113 | 325 |
| MS.gene55401.t1 | AT5G10450 | 65.145 | 241 | 81 | 1 | 1 | 238 | 1 | 241 | 1.93e-112 | 324 |
| MS.gene55401.t1 | AT5G10450 | 65.145 | 241 | 81 | 1 | 1 | 238 | 1 | 241 | 4.83e-112 | 323 |
| MS.gene55401.t1 | AT1G78220 | 51.709 | 234 | 112 | 1 | 4 | 236 | 2 | 235 | 3.45e-83 | 249 |
| MS.gene55401.t1 | AT1G22290 | 49.537 | 216 | 85 | 5 | 4 | 214 | 2 | 198 | 5.65e-60 | 189 |
| MS.gene55401.t1 | AT1G22290 | 49.296 | 213 | 84 | 5 | 4 | 211 | 2 | 195 | 1.79e-59 | 187 |
| MS.gene55401.t1 | AT2G10450 | 59.574 | 47 | 19 | 0 | 204 | 250 | 16 | 62 | 2.20e-12 | 61.6 |
Find 60 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATCGATTGCTTACCTTTC+AGG | 0.105745 | 5.3:+31762777 | None:intergenic |
| CAGAATATCACCACAGATTT+TGG | 0.109197 | 5.3:+31763851 | None:intergenic |
| TGAGCAGAAGGAGGAGTCTA+AGG | 0.249783 | 5.3:-31763934 | MS.gene55401:CDS |
| GCAGGAAAGGGGATTATTTC+CGG | 0.289859 | 5.3:-31763072 | MS.gene55401:intron |
| CGCCTCATCAAAAGCTTGTT+TGG | 0.319773 | 5.3:+31762669 | None:intergenic |
| TACCTCAGGCTCAGCGGGTT+TGG | 0.338393 | 5.3:+31762012 | None:intergenic |
| AGAGTTCCTCCTCAACCTTT+TGG | 0.345006 | 5.3:+31763874 | None:intergenic |
| CAAAAGCTTGTTTGGCCAAA+TGG | 0.349323 | 5.3:+31762677 | None:intergenic |
| AACTTACAGGGCCTGCCATT+TGG | 0.370260 | 5.3:-31762692 | MS.gene55401:intron |
| TTCATATCTTTCAGCTTGTT+CGG | 0.370539 | 5.3:+31764883 | None:intergenic |
| GAGAGAGACCCAAGTTTACT+TGG | 0.378465 | 5.3:-31764915 | MS.gene55401:CDS |
| GACAATTATTGACCAGCATC+TGG | 0.387445 | 5.3:-31763829 | MS.gene55401:CDS |
| AATCAGAGGTCCAGAGAGTC+AGG | 0.404705 | 5.3:+31762572 | None:intergenic |
| AAAGCTTGGCCAAGTAAACT+TGG | 0.423724 | 5.3:+31764906 | None:intergenic |
| TTCAGCTTGTTCGGAAAGCT+TGG | 0.436972 | 5.3:+31764892 | None:intergenic |
| TGAGAGACAACCTGACTCTC+TGG | 0.448857 | 5.3:-31762582 | MS.gene55401:CDS |
| AGCTTGTTTGGCCAAATGGC+AGG | 0.464126 | 5.3:+31762681 | None:intergenic |
| TGATGAGGCGATTGCAGAGT+TGG | 0.469932 | 5.3:-31762656 | MS.gene55401:CDS |
| AGACGGATTGGATGTGTTGA+TGG | 0.480349 | 5.3:+31762849 | None:intergenic |
| GCTTCTGCCGAGGTGGAAGC+AGG | 0.494681 | 5.3:+31763804 | None:intergenic |
| ATACATACCTCAGGCTCAGC+GGG | 0.501637 | 5.3:+31762007 | None:intergenic |
| ACCTCTGATTTGCCAGAGGA+TGG | 0.501755 | 5.3:-31762559 | MS.gene55401:CDS |
| GATCAAGAGTTACTGCCAAA+AGG | 0.518570 | 5.3:-31763889 | MS.gene55401:CDS |
| GAACAAGCTGAAAGATATGA+AGG | 0.522838 | 5.3:-31764881 | MS.gene55401:intron |
| TCTTGAACTCAGCAAGATAC+CGG | 0.525675 | 5.3:+31763053 | None:intergenic |
| TTGGTGCACGAAGAGCTTCA+TGG | 0.527662 | 5.3:-31763974 | MS.gene55401:CDS |
| CTCCTCCTTCTGCTCAATTG+AGG | 0.527914 | 5.3:+31763941 | None:intergenic |
| GAGTTACTGCCAAAAGGTTG+AGG | 0.532495 | 5.3:-31763883 | MS.gene55401:CDS |
| TATCCCTTACCTCCATCCTC+TGG | 0.533069 | 5.3:+31762547 | None:intergenic |
| TGGAAGCAGGAACCAGATGC+TGG | 0.540094 | 5.3:+31763817 | None:intergenic |
| TCAACACATCCAATCCGTCT+TGG | 0.541520 | 5.3:-31762846 | MS.gene55401:CDS |
| GAGAGGAACCTCCTCTCAGT+TGG | 0.543164 | 5.3:-31764011 | MS.gene55401:CDS |
| AGTGCAAGTCCAAGACGGAT+TGG | 0.548630 | 5.3:+31762837 | None:intergenic |
| AAGATCAGTGTTTGCAGTGG+CGG | 0.557206 | 5.3:+31762872 | None:intergenic |
| GACTGACCAAGAGAGAAAAG+AGG | 0.559564 | 5.3:-31763032 | MS.gene55401:CDS |
| TATGTCCTCAATTGAGCAGA+AGG | 0.567548 | 5.3:-31763946 | MS.gene55401:CDS |
| AACATTAGCTTCTGCCGAGG+TGG | 0.575120 | 5.3:+31763797 | None:intergenic |
| AGCCAAACCCGCTGAGCCTG+AGG | 0.586083 | 5.3:-31762014 | MS.gene55401:intron |
| CTTGAGTGAAGAGTCGTACA+AGG | 0.586539 | 5.3:-31762629 | MS.gene55401:CDS |
| TTGAACTAACTGTGGAAGAG+AGG | 0.589747 | 5.3:-31764028 | MS.gene55401:CDS |
| GAGCAGAAGGAGGAGTCTAA+GGG | 0.589752 | 5.3:-31763933 | MS.gene55401:CDS |
| CTGGACCTCTGATTTGCCAG+AGG | 0.595427 | 5.3:-31762563 | MS.gene55401:CDS |
| GGTTGAATGTATGAAGAAAG+TGG | 0.595766 | 5.3:-31764063 | MS.gene55401:CDS |
| GCTGCTGAGCAGTCACTGAA+AGG | 0.600437 | 5.3:-31763010 | MS.gene55401:CDS |
| AGATTATGAACTCTCCTGAA+AGG | 0.605075 | 5.3:-31762791 | MS.gene55401:intron |
| CTTGTACGACTCTTCACTCA+AGG | 0.608037 | 5.3:+31762630 | None:intergenic |
| AAGCTTGGCCAAGTAAACTT+GGG | 0.611139 | 5.3:+31764907 | None:intergenic |
| TCCATCCTCTGGCAAATCAG+AGG | 0.621846 | 5.3:+31762558 | None:intergenic |
| GAGGAACTCTCCAAAATCTG+TGG | 0.639940 | 5.3:-31763861 | MS.gene55401:CDS |
| TCTGATTTGCCAGAGGATGG+AGG | 0.645454 | 5.3:-31762556 | MS.gene55401:intron |
| ACTTGATGTTGAACTAACTG+TGG | 0.647498 | 5.3:-31764036 | MS.gene55401:CDS |
| TTACTGCCAAAAGGTTGAGG+AGG | 0.652188 | 5.3:-31763880 | MS.gene55401:CDS |
| AGTTGAGTGCAAGTCCAAGA+CGG | 0.652366 | 5.3:+31762832 | None:intergenic |
| GTCCTCAATTGAGCAGAAGG+AGG | 0.654997 | 5.3:-31763943 | MS.gene55401:CDS |
| GGTCTCTCTCTCTTTCTCAG+CGG | 0.674609 | 5.3:+31764928 | None:intergenic |
| GAAAACATTAGCTTCTGCCG+AGG | 0.676043 | 5.3:+31763794 | None:intergenic |
| TCTGGTTCCTGCTTCCACCT+CGG | 0.676873 | 5.3:-31763811 | MS.gene55401:CDS |
| TATACATACCTCAGGCTCAG+CGG | 0.690490 | 5.3:+31762006 | None:intergenic |
| TGGAAGATCAGTGTTTGCAG+TGG | 0.713574 | 5.3:+31762869 | None:intergenic |
| GCAGTCACTGAAAGGATACG+AGG | 0.737880 | 5.3:-31763002 | MS.gene55401:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTGCTTTTAAAAATTA+GGG | - | chr5.3:31764245-31764264 | MS.gene55401:intron | 10.0% |
| !! | AAAAATTACGTGTTTAATAA+TGG | + | chr5.3:31762503-31762522 | None:intergenic | 15.0% |
| !! | AAAATAATATGTCTACTAAA+AGG | + | chr5.3:31763067-31763086 | None:intergenic | 15.0% |
| !! | AATATGTTATCTAAAAATGT+TGG | - | chr5.3:31762246-31762265 | MS.gene55401:intron | 15.0% |
| !! | TGTACATTCATAATAAATTA+TGG | - | chr5.3:31762295-31762314 | MS.gene55401:intron | 15.0% |
| !!! | AAAAACATAATGTCAAATTT+TGG | + | chr5.3:31764925-31764944 | None:intergenic | 15.0% |
| !!! | AAAACATAATGTCAAATTTT+GGG | + | chr5.3:31764924-31764943 | None:intergenic | 15.0% |
| !!! | AAAGATTTGATTTTTTGATT+TGG | - | chr5.3:31761976-31761995 | MS.gene55401:intron | 15.0% |
| !!! | AAATTCTTTTAAGTGAAAAA+AGG | - | chr5.3:31764836-31764855 | MS.gene55401:intron | 15.0% |
| !!! | AAGATTTGATTTTTTGATTT+GGG | - | chr5.3:31761977-31761996 | MS.gene55401:intron | 15.0% |
| !!! | AATTCTTTTAAGTGAAAAAA+GGG | - | chr5.3:31764837-31764856 | MS.gene55401:intron | 15.0% |
| !!! | AATTTTTAAAAGCAAAAAAC+TGG | + | chr5.3:31764244-31764263 | None:intergenic | 15.0% |
| !!! | CATTAATAAATTATTTCTGA+TGG | - | chr5.3:31763759-31763778 | MS.gene55401:intron | 15.0% |
| !!! | GTTTTTTGCTTTTAAAAATT+AGG | - | chr5.3:31764244-31764263 | MS.gene55401:intron | 15.0% |
| !!! | TTTTATTTTAATTTTGAAGG+TGG | - | chr5.3:31762067-31762086 | MS.gene55401:intron | 15.0% |
| !! | AAAGTATAGGTATATATTGT+TGG | - | chr5.3:31764323-31764342 | MS.gene55401:intron | 20.0% |
| !! | AAGTATAGGTATATATTGTT+GGG | - | chr5.3:31764324-31764343 | MS.gene55401:intron | 20.0% |
| !! | AGATATAGATACTACATTAT+AGG | - | chr5.3:31763329-31763348 | MS.gene55401:intron | 20.0% |
| !! | ATAATAAATTATGGATGTGT+TGG | - | chr5.3:31762304-31762323 | MS.gene55401:intron | 20.0% |
| !! | ATCTTCTAAATTGAGAAATT+TGG | - | chr5.3:31762220-31762239 | MS.gene55401:intron | 20.0% |
| !! | ATTGAACAATTCACTTTAAA+AGG | + | chr5.3:31762377-31762396 | None:intergenic | 20.0% |
| !! | TTACTATAGATCTATAACTA+TGG | + | chr5.3:31764791-31764810 | None:intergenic | 20.0% |
| !!! | AAACATAATGTCAAATTTTG+GGG | + | chr5.3:31764923-31764942 | None:intergenic | 20.0% |
| !!! | AAATTATACAGTTTTCAACA+TGG | + | chr5.3:31762579-31762598 | None:intergenic | 20.0% |
| !!! | CTTTGAATTCTAGTTAATTA+TGG | - | chr5.3:31763301-31763320 | MS.gene55401:intron | 20.0% |
| !!! | GTAATTAAGCTTTTGTTATT+TGG | - | chr5.3:31764589-31764608 | MS.gene55401:intron | 20.0% |
| !!! | TGTTATTTTTTAATGGGTTT+GGG | - | chr5.3:31761870-31761889 | MS.gene55401:intron | 20.0% |
| !!! | TTGTTATTTTTTAATGGGTT+TGG | - | chr5.3:31761869-31761888 | MS.gene55401:intron | 20.0% |
| ! | AAAATAAGCATAAGGAAATC+AGG | + | chr5.3:31763618-31763637 | None:intergenic | 25.0% |
| ! | AAATAAGCATAAGGAAATCA+GGG | + | chr5.3:31763617-31763636 | None:intergenic | 25.0% |
| ! | AAGAGATTTCATATCACATA+AGG | + | chr5.3:31763565-31763584 | None:intergenic | 25.0% |
| ! | AGTTAGGAGTTTAATAAACA+AGG | + | chr5.3:31763411-31763430 | None:intergenic | 25.0% |
| ! | ATCAAATCAAACAAGTAACA+CGG | + | chr5.3:31762181-31762200 | None:intergenic | 25.0% |
| ! | ATGTATTCAATATGCAGAAA+TGG | - | chr5.3:31762629-31762648 | MS.gene55401:CDS | 25.0% |
| ! | ATTAAAAATCTTGGATCTCA+GGG | + | chr5.3:31764279-31764298 | None:intergenic | 25.0% |
| ! | CATTATAGGTTATAGATTAC+AGG | - | chr5.3:31763343-31763362 | MS.gene55401:intron | 25.0% |
| ! | GCTTAATTACACAATTAACT+AGG | + | chr5.3:31764579-31764598 | None:intergenic | 25.0% |
| ! | GTTAGGAGTTTAATAAACAA+GGG | + | chr5.3:31763410-31763429 | None:intergenic | 25.0% |
| ! | GTTTCTATCTATTGTCTAAA+TGG | - | chr5.3:31763989-31764008 | MS.gene55401:CDS | 25.0% |
| !! | AACATAATGTCAAATTTTGG+GGG | + | chr5.3:31764922-31764941 | None:intergenic | 25.0% |
| !! | AGATCAATCATTTTCTAGAT+TGG | - | chr5.3:31762017-31762036 | MS.gene55401:CDS | 25.0% |
| !!! | CTGTTTTTTTGTTGTGATTT+GGG | - | chr5.3:31761930-31761949 | MS.gene55401:intron | 25.0% |
| !!! | TCACAACTGTTTTGATTATT+AGG | - | chr5.3:31763812-31763831 | MS.gene55401:CDS | 25.0% |
| !!! | TCTGTTTTTTTGTTGTGATT+TGG | - | chr5.3:31761929-31761948 | MS.gene55401:intron | 25.0% |
| !!! | TTTGATTTGATGCTTAGATT+AGG | - | chr5.3:31762190-31762209 | MS.gene55401:intron | 25.0% |
| AAACATAGAATCTGTATGAC+TGG | - | chr5.3:31763116-31763135 | MS.gene55401:intron | 30.0% | |
| AAAGGTTAATACTCTCTTAC+AGG | - | chr5.3:31764652-31764671 | MS.gene55401:intron | 30.0% | |
| AAATTAATCTTCCCCTGATA+CGG | + | chr5.3:31762527-31762546 | None:intergenic | 30.0% | |
| ACAACAGTAATGACTAATGA+TGG | - | chr5.3:31762415-31762434 | MS.gene55401:intron | 30.0% | |
| ACCTATACTTTCAATGTGTT+TGG | + | chr5.3:31764314-31764333 | None:intergenic | 30.0% | |
| AGTAGGACTTAATCATGAAA+CGG | + | chr5.3:31763203-31763222 | None:intergenic | 30.0% | |
| ATAGGTATATATTGTTGGGT+AGG | - | chr5.3:31764328-31764347 | MS.gene55401:intron | 30.0% | |
| ATGATAAGGACTACGAAATA+TGG | - | chr5.3:31763453-31763472 | MS.gene55401:intron | 30.0% | |
| ATTTATCGCTATCTTCGTTA+TGG | - | chr5.3:31763030-31763049 | MS.gene55401:CDS | 30.0% | |
| CAACAGTAATGACTAATGAT+GGG | - | chr5.3:31762416-31762435 | MS.gene55401:intron | 30.0% | |
| GATTAAAAATCTTGGATCTC+AGG | + | chr5.3:31764280-31764299 | None:intergenic | 30.0% | |
| GTTGGATATAAAAACGTCAT+TGG | - | chr5.3:31762720-31762739 | MS.gene55401:intron | 30.0% | |
| TACTTTCAATGTGTTTGGTT+TGG | + | chr5.3:31764309-31764328 | None:intergenic | 30.0% | |
| TATAGGGTTTCAGATAAAGA+TGG | - | chr5.3:31763266-31763285 | MS.gene55401:intron | 30.0% | |
| TATATTCCGCTCAAGTTATA+GGG | - | chr5.3:31763250-31763269 | MS.gene55401:intron | 30.0% | |
| TCTATCTATTGTCTAAATGG+TGG | - | chr5.3:31763992-31764011 | MS.gene55401:CDS | 30.0% | |
| TGGATAATTTATCCAATAGC+AGG | + | chr5.3:31764505-31764524 | None:intergenic | 30.0% | |
| TGTGATATGAAATCTCTTTC+TGG | - | chr5.3:31763567-31763586 | MS.gene55401:intron | 30.0% | |
| TTATATTCCGCTCAAGTTAT+AGG | - | chr5.3:31763249-31763268 | MS.gene55401:intron | 30.0% | |
| ! | ACAATATGACTATGGTTTTC+TGG | + | chr5.3:31764525-31764544 | None:intergenic | 30.0% |
| ! | ACCAAACACATTGAAAGTAT+AGG | - | chr5.3:31764310-31764329 | MS.gene55401:intron | 30.0% |
| ! | ACGTAATTTTTACCGTATCA+GGG | - | chr5.3:31762512-31762531 | MS.gene55401:intron | 30.0% |
| ! | GAGATCCAAGATTTTTAATC+TGG | - | chr5.3:31764280-31764299 | MS.gene55401:intron | 30.0% |
| ! | TTATTGATGTGTCATTGTGT+TGG | - | chr5.3:31762151-31762170 | MS.gene55401:intron | 30.0% |
| ! | TTCACTGTTAGATTCTAGTT+AGG | + | chr5.3:31763427-31763446 | None:intergenic | 30.0% |
| ! | TTCATATCTTTCAGCTTGTT+CGG | + | chr5.3:31761833-31761852 | None:intergenic | 30.0% |
| !! | ATTTTGGGGGTAGAAATTAA+TGG | + | chr5.3:31764909-31764928 | None:intergenic | 30.0% |
| !! | GGTATGTATAAGATTGGTTT+CGG | - | chr5.3:31764720-31764739 | MS.gene55401:intron | 30.0% |
| !! | TTACGTGTTTAATAATGGAC+TGG | + | chr5.3:31762498-31762517 | None:intergenic | 30.0% |
| !!! | CCTAATTTTTTGACAAGGTT+GGG | + | chr5.3:31764458-31764477 | None:intergenic | 30.0% |
| !!! | CTAATTTTTTGACAAGGTTG+GGG | + | chr5.3:31764457-31764476 | None:intergenic | 30.0% |
| !!! | CTCATCCTAATTTTTTGACA+AGG | + | chr5.3:31764463-31764482 | None:intergenic | 30.0% |
| !!! | TCCTAATTTTTTGACAAGGT+TGG | + | chr5.3:31764459-31764478 | None:intergenic | 30.0% |
| AATTTCAACGACGCAATCAA+AGG | + | chr5.3:31762338-31762357 | None:intergenic | 35.0% | |
| ACAGTGAAGAACTCATGATA+AGG | - | chr5.3:31763439-31763458 | MS.gene55401:intron | 35.0% | |
| ACCAATCTTATACATACCTC+AGG | + | chr5.3:31764718-31764737 | None:intergenic | 35.0% | |
| ACTTGATGTTGAACTAACTG+TGG | - | chr5.3:31762677-31762696 | MS.gene55401:CDS | 35.0% | |
| AGATTATGAACTCTCCTGAA+AGG | - | chr5.3:31763922-31763941 | MS.gene55401:CDS | 35.0% | |
| AGGTGGATAACAAATATGCA+AGG | + | chr5.3:31763167-31763186 | None:intergenic | 35.0% | |
| ATTTCAACGACGCAATCAAA+GGG | + | chr5.3:31762337-31762356 | None:intergenic | 35.0% | |
| CAAAAAACTGGAGATCTTGA+AGG | + | chr5.3:31764232-31764251 | None:intergenic | 35.0% | |
| CCCAACCTTGTCAAAAAATT+AGG | - | chr5.3:31764455-31764474 | MS.gene55401:intron | 35.0% | |
| CCTGCATCAAAATAAGCATA+AGG | + | chr5.3:31763626-31763645 | None:intergenic | 35.0% | |
| GAACAAGCTGAAAGATATGA+AGG | - | chr5.3:31761832-31761851 | MS.gene55401:intron | 35.0% | |
| GAAGATAGCGATAAATCTGA+TGG | + | chr5.3:31763026-31763045 | None:intergenic | 35.0% | |
| GGCATCCAGATTAAAAATCT+TGG | + | chr5.3:31764288-31764307 | None:intergenic | 35.0% | |
| GGTTGAATGTATGAAGAAAG+TGG | - | chr5.3:31762650-31762669 | MS.gene55401:CDS | 35.0% | |
| GTAGGACTTAATCATGAAAC+GGG | + | chr5.3:31763202-31763221 | None:intergenic | 35.0% | |
| GTATATATTGTTGGGTAGGT+TGG | - | chr5.3:31764332-31764351 | MS.gene55401:intron | 35.0% | |
| GTGATGTTATAGACCCAAAT+TGG | - | chr5.3:31762472-31762491 | MS.gene55401:intron | 35.0% | |
| TCCAATGACTCATTCATAGT+AGG | + | chr5.3:31763220-31763239 | None:intergenic | 35.0% | |
| TCCTACTATGAATGAGTCAT+TGG | - | chr5.3:31763216-31763235 | MS.gene55401:intron | 35.0% | |
| TGATGCTTAGATTAGGAAAC+TGG | - | chr5.3:31762197-31762216 | MS.gene55401:intron | 35.0% | |
| TTAATACTCTCTTACAGGTG+AGG | - | chr5.3:31764657-31764676 | MS.gene55401:intron | 35.0% | |
| TTGGGTCTATAACATCACTT+TGG | + | chr5.3:31762470-31762489 | None:intergenic | 35.0% | |
| ! | ATGGTGGTGATAAAACTTAC+AGG | - | chr5.3:31764008-31764027 | MS.gene55401:CDS | 35.0% |
| ! | CACGTAATTTTTACCGTATC+AGG | - | chr5.3:31762511-31762530 | MS.gene55401:intron | 35.0% |
| ! | CAGAATATCACCACAGATTT+TGG | + | chr5.3:31762865-31762884 | None:intergenic | 35.0% |
| ! | CGTAATTTTTACCGTATCAG+GGG | - | chr5.3:31762513-31762532 | MS.gene55401:intron | 35.0% |
| ! | CGTTTTTATATCCAACTGAG+AGG | + | chr5.3:31762716-31762735 | None:intergenic | 35.0% |
| ! | CTAATGATGGGAATTATGCT+TGG | - | chr5.3:31762428-31762447 | MS.gene55401:intron | 35.0% |
| ! | CTCTGGAAACAATATGACTA+TGG | + | chr5.3:31764533-31764552 | None:intergenic | 35.0% |
| ! | TCCTACTAAAGAGGTTCTAA+AGG | - | chr5.3:31764634-31764653 | MS.gene55401:intron | 35.0% |
| ! | TGGTGGTGATAAAACTTACA+GGG | - | chr5.3:31764009-31764028 | MS.gene55401:CDS | 35.0% |
| ! | TTTTATATCCAACTGAGAGG+AGG | + | chr5.3:31762713-31762732 | None:intergenic | 35.0% |
| !! | AATAATGGACTGGCCAATTT+GGG | + | chr5.3:31762488-31762507 | None:intergenic | 35.0% |
| !! | ACCTTTAGAACCTCTTTAGT+AGG | + | chr5.3:31764638-31764657 | None:intergenic | 35.0% |
| !! | TAATAATGGACTGGCCAATT+TGG | + | chr5.3:31762489-31762508 | None:intergenic | 35.0% |
| !! | TTGCATATTTGTTATCCACC+TGG | - | chr5.3:31763166-31763185 | MS.gene55401:intron | 35.0% |
| !! | TTTGGCTTCTTCAGCTTTTA+TGG | + | chr5.3:31764686-31764705 | None:intergenic | 35.0% |
| !!! | CCTTATGCTTATTTTGATGC+AGG | - | chr5.3:31763623-31763642 | MS.gene55401:intron | 35.0% |
| !!! | CTTATTTTGATGCAGGAAAG+GGG | - | chr5.3:31763630-31763649 | MS.gene55401:intron | 35.0% |
| !!! | GCTTATTTTGATGCAGGAAA+GGG | - | chr5.3:31763629-31763648 | MS.gene55401:intron | 35.0% |
| !!! | TGCTTATTTTGATGCAGGAA+AGG | - | chr5.3:31763628-31763647 | MS.gene55401:intron | 35.0% |
| AAAGCTTGGCCAAGTAAACT+TGG | + | chr5.3:31761810-31761829 | None:intergenic | 40.0% | |
| AAATCTGATGGCCAACAAGT+CGG | + | chr5.3:31763014-31763033 | None:intergenic | 40.0% | |
| AAGCTTGGCCAAGTAAACTT+GGG | + | chr5.3:31761809-31761828 | None:intergenic | 40.0% | |
| CATAGAATCTGTATGACTGG+TGG | - | chr5.3:31763119-31763138 | MS.gene55401:intron | 40.0% | |
| CGATTCTCTCATACTTTGCA+TGG | - | chr5.3:31763953-31763972 | MS.gene55401:CDS | 40.0% | |
| CTGAAACCCTATAACTTGAG+CGG | + | chr5.3:31763259-31763278 | None:intergenic | 40.0% | |
| GAATCGATTGCTTACCTTTC+AGG | + | chr5.3:31763939-31763958 | None:intergenic | 40.0% | |
| GACAATTATTGACCAGCATC+TGG | - | chr5.3:31762884-31762903 | MS.gene55401:intron | 40.0% | |
| GATCAAGAGTTACTGCCAAA+AGG | - | chr5.3:31762824-31762843 | MS.gene55401:CDS | 40.0% | |
| GATTACTCTTGCGGTGATTA+GGG | + | chr5.3:31764412-31764431 | None:intergenic | 40.0% | |
| GCCTGAGGTATGTATAAGAT+TGG | - | chr5.3:31764714-31764733 | MS.gene55401:intron | 40.0% | |
| GGACTACGAAATATGGAAAC+TGG | - | chr5.3:31763460-31763479 | MS.gene55401:intron | 40.0% | |
| TAAGAAACTGTGCCTGCTAT+TGG | - | chr5.3:31764490-31764509 | MS.gene55401:intron | 40.0% | |
| TAGAACTGCTCCTACTAAAG+AGG | - | chr5.3:31764625-31764644 | MS.gene55401:intron | 40.0% | |
| TATGTCCTCAATTGAGCAGA+AGG | - | chr5.3:31762767-31762786 | MS.gene55401:intron | 40.0% | |
| TCACTAGAAGAAACTCACTC+TGG | + | chr5.3:31764550-31764569 | None:intergenic | 40.0% | |
| TCTTGAACTCAGCAAGATAC+CGG | + | chr5.3:31763663-31763682 | None:intergenic | 40.0% | |
| TGATTACTCTTGCGGTGATT+AGG | + | chr5.3:31764413-31764432 | None:intergenic | 40.0% | |
| TGATTAGGGACAAGTCAACT+TGG | + | chr5.3:31764398-31764417 | None:intergenic | 40.0% | |
| TTGAACTAACTGTGGAAGAG+AGG | - | chr5.3:31762685-31762704 | MS.gene55401:CDS | 40.0% | |
| TTGGCATTCCATATCCTAGT+GGG | - | chr5.3:31764351-31764370 | MS.gene55401:intron | 40.0% | |
| ! | AAGTCAACTTGGTGGACAAT+GGG | + | chr5.3:31764387-31764406 | None:intergenic | 40.0% |
| ! | CAAAAGCTTGTTTGGCCAAA+TGG | + | chr5.3:31764039-31764058 | None:intergenic | 40.0% |
| ! | GTTCTTGCTGATGCATTGAT+TGG | - | chr5.3:31762089-31762108 | MS.gene55401:intron | 40.0% |
| ! | TCAAATCCTTTCCGACTTGT+TGG | - | chr5.3:31763000-31763019 | MS.gene55401:intron | 40.0% |
| ! | TTTTTGACAAGGTTGGGGTA+AGG | + | chr5.3:31764452-31764471 | None:intergenic | 40.0% |
| AAGATCAGTGTTTGCAGTGG+CGG | + | chr5.3:31763844-31763863 | None:intergenic | 45.0% | |
| AGTTGAGTGCAAGTCCAAGA+CGG | + | chr5.3:31763884-31763903 | None:intergenic | 45.0% | |
| CATTTGTCCCCACTAGGATA+TGG | + | chr5.3:31764362-31764381 | None:intergenic | 45.0% | |
| CGAGTGGATGATTACTCTTG+CGG | + | chr5.3:31764421-31764440 | None:intergenic | 45.0% | |
| CTTGAGTGAAGAGTCGTACA+AGG | - | chr5.3:31764084-31764103 | MS.gene55401:intron | 45.0% | |
| CTTGTACGACTCTTCACTCA+AGG | + | chr5.3:31764086-31764105 | None:intergenic | 45.0% | |
| GACTGACCAAGAGAGAAAAG+AGG | - | chr5.3:31763681-31763700 | MS.gene55401:intron | 45.0% | |
| GAGAGAGACCCAAGTTTACT+TGG | - | chr5.3:31761798-31761817 | MS.gene55401:intron | 45.0% | |
| GAGGAACTCTCCAAAATCTG+TGG | - | chr5.3:31762852-31762871 | MS.gene55401:CDS | 45.0% | |
| GAGTTACTGCCAAAAGGTTG+AGG | - | chr5.3:31762830-31762849 | MS.gene55401:CDS | 45.0% | |
| GCAGGAAAGGGGATTATTTC+CGG | - | chr5.3:31763641-31763660 | MS.gene55401:intron | 45.0% | |
| GGGTAAGGATACAAATCGAG+TGG | + | chr5.3:31764437-31764456 | None:intergenic | 45.0% | |
| GTTGGCATTCCATATCCTAG+TGG | - | chr5.3:31764350-31764369 | MS.gene55401:intron | 45.0% | |
| TATACATACCTCAGGCTCAG+CGG | + | chr5.3:31764710-31764729 | None:intergenic | 45.0% | |
| TCAACACATCCAATCCGTCT+TGG | - | chr5.3:31763867-31763886 | MS.gene55401:CDS | 45.0% | |
| TGGAAGATCAGTGTTTGCAG+TGG | + | chr5.3:31763847-31763866 | None:intergenic | 45.0% | |
| TGGCATTCCATATCCTAGTG+GGG | - | chr5.3:31764352-31764371 | MS.gene55401:intron | 45.0% | |
| TTACTGCCAAAAGGTTGAGG+AGG | - | chr5.3:31762833-31762852 | MS.gene55401:CDS | 45.0% | |
| TTAGGGACAAGTCAACTTGG+TGG | + | chr5.3:31764395-31764414 | None:intergenic | 45.0% | |
| ! | AGAGTTCCTCCTCAACCTTT+TGG | + | chr5.3:31762842-31762861 | None:intergenic | 45.0% |
| ! | CAAGTCAACTTGGTGGACAA+TGG | + | chr5.3:31764388-31764407 | None:intergenic | 45.0% |
| ! | CGCCTCATCAAAAGCTTGTT+TGG | + | chr5.3:31764047-31764066 | None:intergenic | 45.0% |
| ! | GAAAACATTAGCTTCTGCCG+AGG | + | chr5.3:31762922-31762941 | None:intergenic | 45.0% |
| ! | GGCCAAACAAGCTTTTGATG+AGG | - | chr5.3:31764042-31764061 | MS.gene55401:CDS | 45.0% |
| ! | TTCAGCTTGTTCGGAAAGCT+TGG | + | chr5.3:31761824-31761843 | None:intergenic | 45.0% |
| !! | AGACGGATTGGATGTGTTGA+TGG | + | chr5.3:31763867-31763886 | None:intergenic | 45.0% |
| !! | TTTCTGGCTCACACGTACTT+TGG | - | chr5.3:31763583-31763602 | MS.gene55401:intron | 45.0% |
| !!! | TAATTTTGTTATTTTTTAAT+GGG | - | chr5.3:31761864-31761883 | MS.gene55401:intron | 5.0% |
| !!! | TTAATTTTGTTATTTTTTAA+TGG | - | chr5.3:31761863-31761882 | MS.gene55401:intron | 5.0% |
| !!! | TTATTTTATTTTAATTTTGA+AGG | - | chr5.3:31762064-31762083 | MS.gene55401:intron | 5.0% |
| AACTTACAGGGCCTGCCATT+TGG | - | chr5.3:31764021-31764040 | MS.gene55401:CDS | 50.0% | |
| AATCAGAGGTCCAGAGAGTC+AGG | + | chr5.3:31764144-31764163 | None:intergenic | 50.0% | |
| AGTGCAAGTCCAAGACGGAT+TGG | + | chr5.3:31763879-31763898 | None:intergenic | 50.0% | |
| ATACATACCTCAGGCTCAGC+GGG | + | chr5.3:31764709-31764728 | None:intergenic | 50.0% | |
| CTCCTCCTTCTGCTCAATTG+AGG | + | chr5.3:31762775-31762794 | None:intergenic | 50.0% | |
| GAGCAGAAGGAGGAGTCTAA+GGG | - | chr5.3:31762780-31762799 | MS.gene55401:intron | 50.0% | |
| GCAGTCACTGAAAGGATACG+AGG | - | chr5.3:31763711-31763730 | MS.gene55401:intron | 50.0% | |
| GGTCTCTCTCTCTTTCTCAG+CGG | + | chr5.3:31761788-31761807 | None:intergenic | 50.0% | |
| GTCCTCAATTGAGCAGAAGG+AGG | - | chr5.3:31762770-31762789 | MS.gene55401:intron | 50.0% | |
| TATCCCTTACCTCCATCCTC+TGG | + | chr5.3:31764169-31764188 | None:intergenic | 50.0% | |
| TCCATCCTCTGGCAAATCAG+AGG | + | chr5.3:31764158-31764177 | None:intergenic | 50.0% | |
| TGAGAGACAACCTGACTCTC+TGG | - | chr5.3:31764131-31764150 | MS.gene55401:intron | 50.0% | |
| TGAGCAGAAGGAGGAGTCTA+AGG | - | chr5.3:31762779-31762798 | MS.gene55401:intron | 50.0% | |
| TGATGAGGCGATTGCAGAGT+TGG | - | chr5.3:31764057-31764076 | MS.gene55401:CDS | 50.0% | |
| TGATGGCCAACAAGTCGGAA+AGG | + | chr5.3:31763009-31763028 | None:intergenic | 50.0% | |
| TTGCCAGAGGATGGAGGTAA+GGG | - | chr5.3:31764163-31764182 | MS.gene55401:intron | 50.0% | |
| TTGGTGCACGAAGAGCTTCA+TGG | - | chr5.3:31762739-31762758 | MS.gene55401:intron | 50.0% | |
| TTTGCCAGAGGATGGAGGTA+AGG | - | chr5.3:31764162-31764181 | MS.gene55401:intron | 50.0% | |
| ! | AACATTAGCTTCTGCCGAGG+TGG | + | chr5.3:31762919-31762938 | None:intergenic | 50.0% |
| ! | ACCTCTGATTTGCCAGAGGA+TGG | - | chr5.3:31764154-31764173 | MS.gene55401:intron | 50.0% |
| ! | AGCTTGTTTGGCCAAATGGC+AGG | + | chr5.3:31764035-31764054 | None:intergenic | 50.0% |
| ! | CAGCAGCCTCTTTTCTCTCT+TGG | + | chr5.3:31763690-31763709 | None:intergenic | 50.0% |
| ! | TCTGATTTGCCAGAGGATGG+AGG | - | chr5.3:31764157-31764176 | MS.gene55401:intron | 50.0% |
| GAAACGGGTGCTCATCTACC+AGG | + | chr5.3:31763187-31763206 | None:intergenic | 55.0% | |
| GAGAGGAACCTCCTCTCAGT+TGG | - | chr5.3:31762702-31762721 | MS.gene55401:intron | 55.0% | |
| GCTGCTGAGCAGTCACTGAA+AGG | - | chr5.3:31763703-31763722 | MS.gene55401:intron | 55.0% | |
| TGGAAGCAGGAACCAGATGC+TGG | + | chr5.3:31762899-31762918 | None:intergenic | 55.0% | |
| ! | CTGGACCTCTGATTTGCCAG+AGG | - | chr5.3:31764150-31764169 | MS.gene55401:intron | 55.0% |
| ! | TCTGGTTCCTGCTTCCACCT+CGG | - | chr5.3:31762902-31762921 | MS.gene55401:intron | 55.0% |
| !! | TGGGAGCATTTGTCCCCACT+AGG | + | chr5.3:31764368-31764387 | None:intergenic | 55.0% |
| ACGGGTGCTCATCTACCAGG+TGG | + | chr5.3:31763184-31763203 | None:intergenic | 60.0% | |
| ! | TACCTCAGGCTCAGCGGGTT+TGG | + | chr5.3:31764704-31764723 | None:intergenic | 60.0% |
| AGCCAAACCCGCTGAGCCTG+AGG | - | chr5.3:31764699-31764718 | MS.gene55401:intron | 65.0% | |
| GCTTCTGCCGAGGTGGAAGC+AGG | + | chr5.3:31762912-31762931 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 31761781 | 31764954 | 31761781 | ID=MS.gene55401 |
| chr5.3 | mRNA | 31761781 | 31764954 | 31761781 | ID=MS.gene55401.t1;Parent=MS.gene55401 |
| chr5.3 | exon | 31764882 | 31764954 | 31764882 | ID=MS.gene55401.t1.exon1;Parent=MS.gene55401.t1 |
| chr5.3 | CDS | 31764882 | 31764954 | 31764882 | ID=cds.MS.gene55401.t1;Parent=MS.gene55401.t1 |
| chr5.3 | exon | 31763783 | 31764089 | 31763783 | ID=MS.gene55401.t1.exon2;Parent=MS.gene55401.t1 |
| chr5.3 | CDS | 31763783 | 31764089 | 31763783 | ID=cds.MS.gene55401.t1;Parent=MS.gene55401.t1 |
| chr5.3 | exon | 31763003 | 31763090 | 31763003 | ID=MS.gene55401.t1.exon3;Parent=MS.gene55401.t1 |
| chr5.3 | CDS | 31763003 | 31763090 | 31763003 | ID=cds.MS.gene55401.t1;Parent=MS.gene55401.t1 |
| chr5.3 | exon | 31762792 | 31762901 | 31762792 | ID=MS.gene55401.t1.exon4;Parent=MS.gene55401.t1 |
| chr5.3 | CDS | 31762792 | 31762901 | 31762792 | ID=cds.MS.gene55401.t1;Parent=MS.gene55401.t1 |
| chr5.3 | exon | 31762557 | 31762705 | 31762557 | ID=MS.gene55401.t1.exon5;Parent=MS.gene55401.t1 |
| chr5.3 | CDS | 31762557 | 31762705 | 31762557 | ID=cds.MS.gene55401.t1;Parent=MS.gene55401.t1 |
| chr5.3 | exon | 31762015 | 31762061 | 31762015 | ID=MS.gene55401.t1.exon6;Parent=MS.gene55401.t1 |
| chr5.3 | CDS | 31762015 | 31762061 | 31762015 | ID=cds.MS.gene55401.t1;Parent=MS.gene55401.t1 |
| chr5.3 | exon | 31761781 | 31761786 | 31761781 | ID=MS.gene55401.t1.exon7;Parent=MS.gene55401.t1 |
| chr5.3 | CDS | 31761781 | 31761786 | 31761781 | ID=cds.MS.gene55401.t1;Parent=MS.gene55401.t1 |
| Gene Sequence |
| Protein sequence |
