Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86055.t1 | XP_003618571.1 | 97.8 | 315 | 7 | 0 | 25 | 339 | 84 | 398 | 7.40E-177 | 629.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86055.t1 | Q2HWC9 | 97.8 | 315 | 7 | 0 | 25 | 339 | 84 | 398 | 5.3e-177 | 629.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene86055 | 0.818728 | 1.68E-52 | -1.69E-46 |
| MS.gene049150 | MS.gene86055 | 0.864782 | 9.49E-65 | -1.69E-46 |
| MS.gene049151 | MS.gene86055 | 0.843188 | 1.63E-58 | -1.69E-46 |
| MS.gene049153 | MS.gene86055 | 0.867516 | 1.29E-65 | -1.69E-46 |
| MS.gene049233 | MS.gene86055 | 0.804205 | 2.42E-49 | -1.69E-46 |
| MS.gene049260 | MS.gene86055 | 0.841737 | 3.96E-58 | -1.69E-46 |
| MS.gene049284 | MS.gene86055 | 0.816504 | 5.35E-52 | -1.69E-46 |
| MS.gene049297 | MS.gene86055 | 0.851631 | 7.83E-61 | -1.69E-46 |
| MS.gene04933 | MS.gene86055 | 0.805758 | 1.14E-49 | -1.69E-46 |
| MS.gene049346 | MS.gene86055 | 0.860317 | 2.25E-63 | -1.69E-46 |
| MS.gene049351 | MS.gene86055 | 0.825443 | 4.67E-54 | -1.69E-46 |
| MS.gene049378 | MS.gene86055 | 0.819759 | 9.81E-53 | -1.69E-46 |
| MS.gene049389 | MS.gene86055 | 0.828941 | 6.79E-55 | -1.69E-46 |
| MS.gene049426 | MS.gene86055 | 0.856565 | 2.95E-62 | -1.69E-46 |
| MS.gene049491 | MS.gene86055 | 0.830665 | 2.58E-55 | -1.69E-46 |
| MS.gene049599 | MS.gene86055 | -0.812796 | 3.54E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene86055 | 0.829919 | 3.93E-55 | -1.69E-46 |
| MS.gene049662 | MS.gene86055 | 0.831909 | 1.28E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene86055 | 0.89921 | 2.48E-77 | -1.69E-46 |
| MS.gene049910 | MS.gene86055 | 0.885639 | 6.84E-72 | -1.69E-46 |
| MS.gene049915 | MS.gene86055 | 0.840916 | 6.52E-58 | -1.69E-46 |
| MS.gene049993 | MS.gene86055 | 0.810654 | 1.04E-50 | -1.69E-46 |
| MS.gene050076 | MS.gene86055 | 0.814108 | 1.82E-51 | -1.69E-46 |
| MS.gene050099 | MS.gene86055 | 0.807798 | 4.24E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene86055 | 0.843143 | 1.68E-58 | -1.69E-46 |
| MS.gene050168 | MS.gene86055 | 0.82347 | 1.36E-53 | -1.69E-46 |
| MS.gene050226 | MS.gene86055 | 0.844709 | 6.39E-59 | -1.69E-46 |
| MS.gene050227 | MS.gene86055 | 0.84642 | 2.20E-59 | -1.69E-46 |
| MS.gene050228 | MS.gene86055 | 0.83811 | 3.49E-57 | -1.69E-46 |
| MS.gene050231 | MS.gene86055 | 0.805717 | 1.17E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene86055 | 0.927589 | 9.52E-92 | -1.69E-46 |
| MS.gene050330 | MS.gene86055 | -0.841156 | 5.64E-58 | -1.69E-46 |
| MS.gene050397 | MS.gene86055 | 0.840063 | 1.09E-57 | -1.69E-46 |
| MS.gene050406 | MS.gene86055 | 0.835212 | 1.91E-56 | -1.69E-46 |
| MS.gene050426 | MS.gene86055 | -0.802248 | 6.14E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene86055 | 0.810788 | 9.68E-51 | -1.69E-46 |
| MS.gene050464 | MS.gene86055 | 0.862341 | 5.43E-64 | -1.69E-46 |
| MS.gene050529 | MS.gene86055 | 0.850263 | 1.90E-60 | -1.69E-46 |
| MS.gene050558 | MS.gene86055 | 0.90314 | 4.72E-79 | -1.69E-46 |
| MS.gene050560 | MS.gene86055 | 0.854457 | 1.22E-61 | -1.69E-46 |
| MS.gene050623 | MS.gene86055 | -0.808735 | 2.68E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene86055 | 0.85176 | 7.19E-61 | -1.69E-46 |
| MS.gene050650 | MS.gene86055 | 0.821769 | 3.38E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene86055 | 0.845147 | 4.87E-59 | -1.69E-46 |
| MS.gene050787 | MS.gene86055 | 0.819295 | 1.25E-52 | -1.69E-46 |
| MS.gene050812 | MS.gene86055 | 0.802711 | 4.93E-49 | -1.69E-46 |
| MS.gene050820 | MS.gene86055 | 0.861236 | 1.18E-63 | -1.69E-46 |
| MS.gene05101 | MS.gene86055 | 0.879915 | 8.43E-70 | -1.69E-46 |
| MS.gene05119 | MS.gene86055 | -0.849732 | 2.68E-60 | -1.69E-46 |
| MS.gene051471 | MS.gene86055 | 0.861001 | 1.39E-63 | -1.69E-46 |
| MS.gene051525 | MS.gene86055 | 0.832739 | 7.96E-56 | -1.69E-46 |
| MS.gene051582 | MS.gene86055 | 0.881899 | 1.64E-70 | -1.69E-46 |
| MS.gene051662 | MS.gene86055 | 0.83379 | 4.35E-56 | -1.69E-46 |
| MS.gene051663 | MS.gene86055 | 0.864675 | 1.03E-64 | -1.69E-46 |
| MS.gene051860 | MS.gene86055 | 0.900206 | 9.24E-78 | -1.69E-46 |
| MS.gene051983 | MS.gene86055 | 0.873001 | 2.06E-67 | -1.69E-46 |
| MS.gene052011 | MS.gene86055 | -0.84438 | 7.83E-59 | -1.69E-46 |
| MS.gene052077 | MS.gene86055 | 0.854405 | 1.26E-61 | -1.69E-46 |
| MS.gene052078 | MS.gene86055 | 0.843523 | 1.33E-58 | -1.69E-46 |
| MS.gene052178 | MS.gene86055 | 0.858724 | 6.77E-63 | -1.69E-46 |
| MS.gene052188 | MS.gene86055 | 0.87426 | 7.76E-68 | -1.69E-46 |
| MS.gene052207 | MS.gene86055 | 0.835558 | 1.56E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene86055 | 0.896271 | 4.33E-76 | -1.69E-46 |
| MS.gene052255 | MS.gene86055 | 0.840911 | 6.54E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene86055 | 0.858016 | 1.10E-62 | -1.69E-46 |
| MS.gene052326 | MS.gene86055 | 0.827735 | 1.33E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene86055 | 0.883523 | 4.18E-71 | -1.69E-46 |
| MS.gene052481 | MS.gene86055 | 0.811937 | 5.45E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene86055 | 0.834318 | 3.21E-56 | -1.69E-46 |
| MS.gene052600 | MS.gene86055 | 0.809158 | 2.17E-50 | -1.69E-46 |
| MS.gene053073 | MS.gene86055 | 0.803074 | 4.15E-49 | -1.69E-46 |
| MS.gene05316 | MS.gene86055 | 0.82694 | 2.06E-54 | -1.69E-46 |
| MS.gene053184 | MS.gene86055 | 0.831763 | 1.39E-55 | -1.69E-46 |
| MS.gene053209 | MS.gene86055 | 0.820631 | 6.19E-53 | -1.69E-46 |
| MS.gene053557 | MS.gene86055 | 0.860626 | 1.81E-63 | -1.69E-46 |
| MS.gene053559 | MS.gene86055 | 0.827034 | 1.96E-54 | -1.69E-46 |
| MS.gene053577 | MS.gene86055 | 0.801045 | 1.08E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene86055 | 0.940751 | 1.36E-100 | -1.69E-46 |
| MS.gene053907 | MS.gene86055 | 0.851939 | 6.40E-61 | -1.69E-46 |
| MS.gene053928 | MS.gene86055 | 0.834317 | 3.21E-56 | -1.69E-46 |
| MS.gene053971 | MS.gene86055 | 0.807616 | 4.63E-50 | -1.69E-46 |
| MS.gene054010 | MS.gene86055 | 0.823452 | 1.37E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene86055 | 0.843876 | 1.07E-58 | -1.69E-46 |
| MS.gene054012 | MS.gene86055 | 0.83204 | 1.19E-55 | -1.69E-46 |
| MS.gene054013 | MS.gene86055 | 0.8254 | 4.78E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene86055 | 0.857003 | 2.19E-62 | -1.69E-46 |
| MS.gene05413 | MS.gene86055 | 0.81229 | 4.57E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene86055 | 0.865167 | 7.18E-65 | -1.69E-46 |
| MS.gene054349 | MS.gene86055 | 0.826601 | 2.48E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene86055 | 0.8789 | 1.93E-69 | -1.69E-46 |
| MS.gene054542 | MS.gene86055 | 0.818402 | 2.00E-52 | -1.69E-46 |
| MS.gene05455 | MS.gene86055 | 0.868328 | 7.09E-66 | -1.69E-46 |
| MS.gene054667 | MS.gene86055 | 0.827546 | 1.47E-54 | -1.69E-46 |
| MS.gene054719 | MS.gene86055 | 0.807012 | 6.22E-50 | -1.69E-46 |
| MS.gene054917 | MS.gene86055 | 0.801048 | 1.08E-48 | -1.69E-46 |
| MS.gene054918 | MS.gene86055 | 0.838381 | 2.97E-57 | -1.69E-46 |
| MS.gene054930 | MS.gene86055 | 0.879742 | 9.72E-70 | -1.69E-46 |
| MS.gene054942 | MS.gene86055 | 0.855212 | 7.34E-62 | -1.69E-46 |
| MS.gene054983 | MS.gene86055 | 0.882303 | 1.17E-70 | -1.69E-46 |
| MS.gene055116 | MS.gene86055 | 0.8735 | 1.40E-67 | -1.69E-46 |
| MS.gene055277 | MS.gene86055 | 0.863022 | 3.35E-64 | -1.69E-46 |
| MS.gene055303 | MS.gene86055 | 0.814485 | 1.50E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene86055 | 0.801515 | 8.68E-49 | -1.69E-46 |
| MS.gene055358 | MS.gene86055 | 0.822279 | 2.58E-53 | -1.69E-46 |
| MS.gene055390 | MS.gene86055 | 0.86443 | 1.22E-64 | -1.69E-46 |
| MS.gene055422 | MS.gene86055 | 0.900204 | 9.25E-78 | -1.69E-46 |
| MS.gene055428 | MS.gene86055 | 0.892915 | 1.02E-74 | -1.69E-46 |
| MS.gene05553 | MS.gene86055 | 0.8652 | 7.02E-65 | -1.69E-46 |
| MS.gene055604 | MS.gene86055 | 0.856089 | 4.07E-62 | -1.69E-46 |
| MS.gene055712 | MS.gene86055 | 0.839589 | 1.45E-57 | -1.69E-46 |
| MS.gene056191 | MS.gene86055 | 0.834942 | 2.24E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene86055 | 0.853948 | 1.70E-61 | -1.69E-46 |
| MS.gene056451 | MS.gene86055 | 0.843211 | 1.61E-58 | -1.69E-46 |
| MS.gene056612 | MS.gene86055 | 0.887605 | 1.23E-72 | -1.69E-46 |
| MS.gene056659 | MS.gene86055 | 0.830445 | 2.93E-55 | -1.69E-46 |
| MS.gene056723 | MS.gene86055 | 0.869721 | 2.50E-66 | -1.69E-46 |
| MS.gene056772 | MS.gene86055 | 0.800864 | 1.18E-48 | -1.69E-46 |
| MS.gene056846 | MS.gene86055 | 0.821606 | 3.69E-53 | -1.69E-46 |
| MS.gene056875 | MS.gene86055 | 0.848828 | 4.78E-60 | -1.69E-46 |
| MS.gene056899 | MS.gene86055 | -0.854866 | 9.25E-62 | -1.69E-46 |
| MS.gene056979 | MS.gene86055 | 0.873085 | 1.93E-67 | -1.69E-46 |
| MS.gene05702 | MS.gene86055 | 0.880778 | 4.15E-70 | -1.69E-46 |
| MS.gene057121 | MS.gene86055 | 0.916995 | 9.09E-86 | -1.69E-46 |
| MS.gene057124 | MS.gene86055 | 0.80905 | 2.29E-50 | -1.69E-46 |
| MS.gene057245 | MS.gene86055 | 0.883455 | 4.42E-71 | -1.69E-46 |
| MS.gene057260 | MS.gene86055 | 0.814949 | 1.19E-51 | -1.69E-46 |
| MS.gene05733 | MS.gene86055 | 0.833012 | 6.81E-56 | -1.69E-46 |
| MS.gene057396 | MS.gene86055 | 0.829257 | 5.70E-55 | -1.69E-46 |
| MS.gene057439 | MS.gene86055 | 0.848966 | 4.38E-60 | -1.69E-46 |
| MS.gene057448 | MS.gene86055 | 0.868385 | 6.79E-66 | -1.69E-46 |
| MS.gene057449 | MS.gene86055 | 0.856759 | 2.59E-62 | -1.69E-46 |
| MS.gene057450 | MS.gene86055 | 0.870524 | 1.37E-66 | -1.69E-46 |
| MS.gene057469 | MS.gene86055 | 0.867307 | 1.51E-65 | -1.69E-46 |
| MS.gene057476 | MS.gene86055 | 0.802629 | 5.12E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene86055 | 0.814458 | 1.53E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene86055 | 0.828771 | 7.47E-55 | -1.69E-46 |
| MS.gene057750 | MS.gene86055 | 0.836875 | 7.24E-57 | -1.69E-46 |
| MS.gene057754 | MS.gene86055 | 0.828849 | 7.15E-55 | -1.69E-46 |
| MS.gene057782 | MS.gene86055 | 0.833134 | 6.35E-56 | -1.69E-46 |
| MS.gene057823 | MS.gene86055 | 0.815239 | 1.02E-51 | -1.69E-46 |
| MS.gene057825 | MS.gene86055 | 0.812717 | 3.68E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene86055 | 0.915832 | 3.68E-85 | -1.69E-46 |
| MS.gene058007 | MS.gene86055 | 0.803124 | 4.05E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene86055 | 0.892073 | 2.22E-74 | -1.69E-46 |
| MS.gene058142 | MS.gene86055 | 0.904131 | 1.69E-79 | -1.69E-46 |
| MS.gene058233 | MS.gene86055 | 0.836866 | 7.28E-57 | -1.69E-46 |
| MS.gene058236 | MS.gene86055 | 0.805136 | 1.54E-49 | -1.69E-46 |
| MS.gene058276 | MS.gene86055 | 0.852039 | 6.00E-61 | -1.69E-46 |
| MS.gene058293 | MS.gene86055 | 0.829942 | 3.88E-55 | -1.69E-46 |
| MS.gene058365 | MS.gene86055 | 0.80433 | 2.28E-49 | -1.69E-46 |
| MS.gene05842 | MS.gene86055 | 0.822084 | 2.86E-53 | -1.69E-46 |
| MS.gene05856 | MS.gene86055 | 0.812711 | 3.69E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene86055 | 0.871536 | 6.34E-67 | -1.69E-46 |
| MS.gene058710 | MS.gene86055 | 0.831878 | 1.30E-55 | -1.69E-46 |
| MS.gene058739 | MS.gene86055 | 0.805299 | 1.43E-49 | -1.69E-46 |
| MS.gene058749 | MS.gene86055 | 0.854869 | 9.23E-62 | -1.69E-46 |
| MS.gene058833 | MS.gene86055 | 0.834391 | 3.08E-56 | -1.69E-46 |
| MS.gene058845 | MS.gene86055 | 0.864814 | 9.28E-65 | -1.69E-46 |
| MS.gene05886 | MS.gene86055 | 0.876821 | 1.03E-68 | -1.69E-46 |
| MS.gene058928 | MS.gene86055 | 0.835091 | 2.05E-56 | -1.69E-46 |
| MS.gene058949 | MS.gene86055 | 0.812842 | 3.46E-51 | -1.69E-46 |
| MS.gene059011 | MS.gene86055 | 0.803455 | 3.46E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene86055 | 0.908527 | 1.55E-81 | -1.69E-46 |
| MS.gene059124 | MS.gene86055 | 0.815162 | 1.06E-51 | -1.69E-46 |
| MS.gene059128 | MS.gene86055 | 0.820717 | 5.92E-53 | -1.69E-46 |
| MS.gene059141 | MS.gene86055 | 0.834721 | 2.54E-56 | -1.69E-46 |
| MS.gene059247 | MS.gene86055 | 0.832832 | 7.55E-56 | -1.69E-46 |
| MS.gene059285 | MS.gene86055 | 0.854427 | 1.24E-61 | -1.69E-46 |
| MS.gene059294 | MS.gene86055 | 0.808812 | 2.58E-50 | -1.69E-46 |
| MS.gene059342 | MS.gene86055 | 0.812375 | 4.37E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene86055 | 0.858712 | 6.82E-63 | -1.69E-46 |
| MS.gene059462 | MS.gene86055 | 0.835196 | 1.93E-56 | -1.69E-46 |
| MS.gene059518 | MS.gene86055 | 0.868218 | 7.69E-66 | -1.69E-46 |
| MS.gene059597 | MS.gene86055 | 0.896699 | 2.87E-76 | -1.69E-46 |
| MS.gene05959 | MS.gene86055 | 0.801292 | 9.65E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene86055 | 0.834786 | 2.45E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene86055 | 0.872917 | 2.20E-67 | -1.69E-46 |
| MS.gene059692 | MS.gene86055 | 0.872097 | 4.13E-67 | -1.69E-46 |
| MS.gene059695 | MS.gene86055 | 0.872054 | 4.27E-67 | -1.69E-46 |
| MS.gene05984 | MS.gene86055 | 0.902464 | 9.44E-79 | -1.69E-46 |
| MS.gene059894 | MS.gene86055 | 0.892214 | 1.95E-74 | -1.69E-46 |
| MS.gene059899 | MS.gene86055 | 0.861846 | 7.70E-64 | -1.69E-46 |
| MS.gene060247 | MS.gene86055 | 0.822166 | 2.74E-53 | -1.69E-46 |
| MS.gene060314 | MS.gene86055 | 0.809779 | 1.60E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene86055 | 0.840249 | 9.74E-58 | -1.69E-46 |
| MS.gene060403 | MS.gene86055 | 0.82429 | 8.75E-54 | -1.69E-46 |
| MS.gene060407 | MS.gene86055 | 0.853087 | 3.01E-61 | -1.69E-46 |
| MS.gene060476 | MS.gene86055 | 0.837704 | 4.44E-57 | -1.69E-46 |
| MS.gene060495 | MS.gene86055 | 0.819094 | 1.39E-52 | -1.69E-46 |
| MS.gene060559 | MS.gene86055 | 0.807325 | 5.34E-50 | -1.69E-46 |
| MS.gene060986 | MS.gene86055 | 0.810411 | 1.17E-50 | -1.69E-46 |
| MS.gene060994 | MS.gene86055 | 0.804972 | 1.67E-49 | -1.69E-46 |
| MS.gene061000 | MS.gene86055 | 0.801285 | 9.68E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene86055 | 0.916017 | 2.95E-85 | -1.69E-46 |
| MS.gene061051 | MS.gene86055 | -0.827757 | 1.31E-54 | -1.69E-46 |
| MS.gene061085 | MS.gene86055 | 0.801378 | 9.26E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene86055 | -0.848307 | 6.66E-60 | -1.69E-46 |
| MS.gene061154 | MS.gene86055 | 0.802074 | 6.67E-49 | -1.69E-46 |
| MS.gene061159 | MS.gene86055 | 0.876545 | 1.28E-68 | -1.69E-46 |
| MS.gene061265 | MS.gene86055 | 0.800957 | 1.13E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86055.t1 | MTR_6g013150 | 97.778 | 315 | 7 | 0 | 25 | 339 | 84 | 398 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86055.t1 | AT3G29185 | 72.013 | 318 | 86 | 2 | 25 | 339 | 79 | 396 | 5.91e-170 | 478 |
| MS.gene86055.t1 | AT3G29185 | 72.378 | 286 | 76 | 2 | 57 | 339 | 49 | 334 | 1.31e-152 | 432 |
Find 80 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCTTTCTGTTAGCTCTTA+TGG | 0.120996 | 6.3:-8375178 | MS.gene86055:CDS |
| TCATCAAACACTTCAGTTTC+TGG | 0.125528 | 6.3:-8373413 | MS.gene86055:CDS |
| TTACTCCATTTCTTGGTAAA+TGG | 0.159581 | 6.3:-8372178 | MS.gene86055:CDS |
| AGCAAGAGCCTTTCACATTT+TGG | 0.171401 | 6.3:-8372505 | MS.gene86055:CDS |
| AATAGGATTACTCCATTTCT+TGG | 0.266411 | 6.3:-8372185 | MS.gene86055:CDS |
| ACAAACCGAAGTGGTGTCTA+TGG | 0.282463 | 6.3:-8372140 | MS.gene86055:CDS |
| GACAATTTAGTCACATTTGA+TGG | 0.303591 | 6.3:-8371151 | MS.gene86055:CDS |
| TGACAATGGCCAACTTATTC+AGG | 0.316730 | 6.3:-8372072 | MS.gene86055:intron |
| ACAGTTGACAAAGGTACTTA+TGG | 0.318746 | 6.3:-8379732 | MS.gene86055:CDS |
| CTCCTCTACTTGACAGTGCT+GGG | 0.336473 | 6.3:-8372422 | MS.gene86055:CDS |
| CCTCAATGCAAATGCTTTCT+CGG | 0.336795 | 6.3:+8373175 | None:intergenic |
| AGCTTTCTGTTAGCTCTTAT+GGG | 0.337911 | 6.3:-8375177 | MS.gene86055:CDS |
| CCTCCTCTACTTGACAGTGC+TGG | 0.367725 | 6.3:-8372423 | MS.gene86055:CDS |
| AGCATATCAACAGTGCCTTT+TGG | 0.374978 | 6.3:+8372480 | None:intergenic |
| ACAATCAAAATCTTTCCATT+TGG | 0.388592 | 6.3:-8371056 | MS.gene86055:CDS |
| CCTTTCCATTTACCAAGAAA+TGG | 0.388965 | 6.3:+8372173 | None:intergenic |
| ACCAGTCTTTGCCTCTTGTC+AGG | 0.390941 | 6.3:+8371013 | None:intergenic |
| ATGTTACAACCAATGTTCAT+TGG | 0.412156 | 6.3:-8371189 | MS.gene86055:CDS |
| CACGTACGATGTTGAAGGCT+TGG | 0.432694 | 6.3:-8370987 | MS.gene86055:CDS |
| CTTGTCAACAGTAAACATAT+TGG | 0.435663 | 6.3:+8373346 | None:intergenic |
| CTAACCAACAGAACTCCAAA+TGG | 0.465800 | 6.3:+8371041 | None:intergenic |
| CATGCCAGGACACAGAGAAT+AGG | 0.480971 | 6.3:-8372202 | MS.gene86055:intron |
| CCGAGAAAGCATTTGCATTG+AGG | 0.482157 | 6.3:-8373175 | MS.gene86055:CDS |
| ATTACCTGGTGGCATGTACA+TGG | 0.483394 | 6.3:-8371110 | MS.gene86055:CDS |
| CTTTCCATTTGGAGTTCTGT+TGG | 0.486980 | 6.3:-8371045 | MS.gene86055:CDS |
| AATGCAAATGCTTTCTCGGA+TGG | 0.491967 | 6.3:+8373179 | None:intergenic |
| TGGAAACTGTATTACGGCAG+GGG | 0.496002 | 6.3:-8373133 | MS.gene86055:CDS |
| ACAACCAATGTTCATTGGAC+TGG | 0.500252 | 6.3:-8371184 | MS.gene86055:CDS |
| ATGCAAATGCTTTCTCGGAT+GGG | 0.503693 | 6.3:+8373180 | None:intergenic |
| GTTCGCACGTACGATGTTGA+AGG | 0.507252 | 6.3:-8370992 | MS.gene86055:CDS |
| GTATGTTGGAAACTGTATTA+CGG | 0.507856 | 6.3:-8373139 | MS.gene86055:CDS |
| GATGTTACTTGTACATCTGA+TGG | 0.511525 | 6.3:-8371217 | MS.gene86055:CDS |
| TATCTCTTTGTAAAGAGTAC+AGG | 0.511529 | 6.3:+8372532 | None:intergenic |
| GTATCAAACGGCTGGTATGT+TGG | 0.512387 | 6.3:-8373153 | MS.gene86055:CDS |
| TGTAAAATACCTGAATAAGT+TGG | 0.513142 | 6.3:+8372063 | None:intergenic |
| GTTGGAAACTGTATTACGGC+AGG | 0.523062 | 6.3:-8373135 | MS.gene86055:CDS |
| AGATGACGATGATGCGGAAT+GGG | 0.527733 | 6.3:-8373390 | MS.gene86055:CDS |
| ACCTGACAAGAGGCAAAGAC+TGG | 0.527879 | 6.3:-8371014 | MS.gene86055:CDS |
| ATTTGCATTGAGGTATCAAA+CGG | 0.531909 | 6.3:-8373165 | MS.gene86055:CDS |
| CCATTTCTTGGTAAATGGAA+AGG | 0.533749 | 6.3:-8372173 | MS.gene86055:CDS |
| ATGTTACTTGTACATCTGAT+GGG | 0.537891 | 6.3:-8371216 | MS.gene86055:CDS |
| GAAACTGAAGTGTTTGATGA+AGG | 0.538761 | 6.3:+8373416 | None:intergenic |
| TGTAGCAATTTGATGCTGGC+GGG | 0.541538 | 6.3:-8375225 | MS.gene86055:intron |
| AACAAGAGAAGGTCGGCGAG+AGG | 0.550515 | 6.3:+8372566 | None:intergenic |
| TTCCTAGAGGAACGAAGTGA+GGG | 0.551395 | 6.3:-8372450 | MS.gene86055:CDS |
| GCATTGAGGTATCAAACGGC+TGG | 0.555163 | 6.3:-8373161 | MS.gene86055:CDS |
| ACAAGAGAAGGTCGGCGAGA+GGG | 0.557468 | 6.3:+8372567 | None:intergenic |
| CAAACCGAAGTGGTGTCTAT+GGG | 0.561656 | 6.3:-8372139 | MS.gene86055:CDS |
| TTGGAAACTGTATTACGGCA+GGG | 0.573495 | 6.3:-8373134 | MS.gene86055:CDS |
| CTTCCTAGAGGAACGAAGTG+AGG | 0.575142 | 6.3:-8372451 | MS.gene86055:CDS |
| TATCAGATGATTCTATTACC+TGG | 0.580776 | 6.3:-8371124 | MS.gene86055:CDS |
| CATCCCATGTACATGCCACC+AGG | 0.581224 | 6.3:+8371106 | None:intergenic |
| GACACCACTTCGGTTTGTAA+CGG | 0.583815 | 6.3:+8372145 | None:intergenic |
| GCTTTCTGTTAGCTCTTATG+GGG | 0.591488 | 6.3:-8375176 | MS.gene86055:CDS |
| GAGATGACGATGATGCGGAA+TGG | 0.595696 | 6.3:-8373391 | MS.gene86055:CDS |
| CAATTCTCACAAACAAGAGA+AGG | 0.603260 | 6.3:+8372555 | None:intergenic |
| ACCCCTCACTTCGTTCCTCT+AGG | 0.605321 | 6.3:+8372448 | None:intergenic |
| AATAAAATAAGTAGATGAGA+CGG | 0.608181 | 6.3:+8370964 | None:intergenic |
| TTGTAGCAATTTGATGCTGG+CGG | 0.608328 | 6.3:-8375226 | MS.gene86055:intron |
| CCAGCACTGTCAAGTAGAGG+AGG | 0.612692 | 6.3:+8372423 | None:intergenic |
| TTCTGGAGATGACGATGATG+CGG | 0.615230 | 6.3:-8373396 | MS.gene86055:CDS |
| CACTTCGGTTTGTAACGGAA+CGG | 0.616045 | 6.3:+8372150 | None:intergenic |
| AATGCAGACATGATGCCTCA+AGG | 0.619218 | 6.3:-8379762 | None:intergenic |
| GTTCTTGGAGAAGATGACAT+TGG | 0.622939 | 6.3:-8373110 | MS.gene86055:CDS |
| AATTTAGTCACATTTGATGG+AGG | 0.624019 | 6.3:-8371148 | MS.gene86055:CDS |
| TCCTCTACTTGACAGTGCTG+GGG | 0.624603 | 6.3:-8372421 | MS.gene86055:intron |
| GGAAACTGTATTACGGCAGG+GGG | 0.628370 | 6.3:-8373132 | MS.gene86055:CDS |
| GGTTAGAGACACCTGACAAG+AGG | 0.634907 | 6.3:-8371024 | MS.gene86055:CDS |
| ACCCCAGCACTGTCAAGTAG+AGG | 0.643774 | 6.3:+8372420 | None:intergenic |
| TATGCTTATCATCTTCCTAG+AGG | 0.644237 | 6.3:-8372463 | MS.gene86055:CDS |
| TCTCACAAACAAGAGAAGGT+CGG | 0.653517 | 6.3:+8372559 | None:intergenic |
| ACATTGGTGAAGAATCGCCT+AGG | 0.655898 | 6.3:-8373094 | MS.gene86055:intron |
| TGTGCCAGTCCAATGAACAT+TGG | 0.660969 | 6.3:+8371180 | None:intergenic |
| TGTTACTTGTACATCTGATG+GGG | 0.667390 | 6.3:-8371215 | MS.gene86055:CDS |
| TTACCTGGTGGCATGTACAT+GGG | 0.668069 | 6.3:-8371109 | MS.gene86055:CDS |
| CAGATGATTCTATTACCTGG+TGG | 0.669336 | 6.3:-8371121 | MS.gene86055:CDS |
| TCCTAGAGGAACGAAGTGAG+GGG | 0.678973 | 6.3:-8372449 | MS.gene86055:CDS |
| TAGACCCATAGACACCACTT+CGG | 0.688155 | 6.3:+8372135 | None:intergenic |
| CGTTCCGTTACAAACCGAAG+TGG | 0.693369 | 6.3:-8372149 | MS.gene86055:CDS |
| TTACATGAGATGAATGACAA+TGG | 0.736609 | 6.3:-8372086 | MS.gene86055:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 8370949 | 8379775 | 8370949 | ID=MS.gene86055 |
| chr6.3 | mRNA | 8370949 | 8379775 | 8370949 | ID=MS.gene86055.t1;Parent=MS.gene86055 |
| chr6.3 | exon | 8379704 | 8379775 | 8379704 | ID=MS.gene86055.t1.exon1;Parent=MS.gene86055.t1 |
| chr6.3 | CDS | 8379704 | 8379775 | 8379704 | ID=cds.MS.gene86055.t1;Parent=MS.gene86055.t1 |
| chr6.3 | exon | 8375148 | 8375242 | 8375148 | ID=MS.gene86055.t1.exon2;Parent=MS.gene86055.t1 |
| chr6.3 | CDS | 8375148 | 8375242 | 8375148 | ID=cds.MS.gene86055.t1;Parent=MS.gene86055.t1 |
| chr6.3 | exon | 8373337 | 8373454 | 8373337 | ID=MS.gene86055.t1.exon3;Parent=MS.gene86055.t1 |
| chr6.3 | CDS | 8373337 | 8373454 | 8373337 | ID=cds.MS.gene86055.t1;Parent=MS.gene86055.t1 |
| chr6.3 | exon | 8373095 | 8373213 | 8373095 | ID=MS.gene86055.t1.exon4;Parent=MS.gene86055.t1 |
| chr6.3 | CDS | 8373095 | 8373213 | 8373095 | ID=cds.MS.gene86055.t1;Parent=MS.gene86055.t1 |
| chr6.3 | exon | 8372422 | 8372602 | 8372422 | ID=MS.gene86055.t1.exon5;Parent=MS.gene86055.t1 |
| chr6.3 | CDS | 8372422 | 8372602 | 8372422 | ID=cds.MS.gene86055.t1;Parent=MS.gene86055.t1 |
| chr6.3 | exon | 8372073 | 8372216 | 8372073 | ID=MS.gene86055.t1.exon6;Parent=MS.gene86055.t1 |
| chr6.3 | CDS | 8372073 | 8372216 | 8372073 | ID=cds.MS.gene86055.t1;Parent=MS.gene86055.t1 |
| chr6.3 | exon | 8370949 | 8371239 | 8370949 | ID=MS.gene86055.t1.exon7;Parent=MS.gene86055.t1 |
| chr6.3 | CDS | 8370949 | 8371239 | 8370949 | ID=cds.MS.gene86055.t1;Parent=MS.gene86055.t1 |
| Gene Sequence |
| Protein sequence |
