Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93385.t1 | XP_003604582.1 | 98.3 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 3.20E-123 | 451.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93385.t1 | Q8LBZ4 | 34.4 | 154 | 83 | 4 | 77 | 229 | 168 | 304 | 4.5e-17 | 89.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93385.t1 | G7JLU6 | 98.3 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 2.3e-123 | 451.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene93385 | 0.835577 | 1.55E-56 | -1.69E-46 |
| MS.gene049151 | MS.gene93385 | 0.802595 | 5.21E-49 | -1.69E-46 |
| MS.gene049153 | MS.gene93385 | 0.831512 | 1.60E-55 | -1.69E-46 |
| MS.gene049260 | MS.gene93385 | 0.833792 | 4.35E-56 | -1.69E-46 |
| MS.gene049297 | MS.gene93385 | 0.85226 | 5.19E-61 | -1.69E-46 |
| MS.gene04933 | MS.gene93385 | 0.835844 | 1.32E-56 | -1.69E-46 |
| MS.gene049346 | MS.gene93385 | 0.835408 | 1.71E-56 | -1.69E-46 |
| MS.gene049351 | MS.gene93385 | 0.834029 | 3.80E-56 | -1.69E-46 |
| MS.gene049378 | MS.gene93385 | 0.818953 | 1.50E-52 | -1.69E-46 |
| MS.gene049599 | MS.gene93385 | -0.80771 | 4.42E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene93385 | 0.884907 | 1.28E-71 | -1.69E-46 |
| MS.gene049910 | MS.gene93385 | 0.831122 | 2.00E-55 | -1.69E-46 |
| MS.gene049915 | MS.gene93385 | 0.81295 | 3.27E-51 | -1.69E-46 |
| MS.gene050099 | MS.gene93385 | 0.816556 | 5.20E-52 | -1.69E-46 |
| MS.gene050128 | MS.gene93385 | 0.816178 | 6.32E-52 | -1.69E-46 |
| MS.gene050168 | MS.gene93385 | 0.815618 | 8.43E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene93385 | 0.844303 | 8.22E-59 | -1.69E-46 |
| MS.gene050227 | MS.gene93385 | 0.845928 | 2.99E-59 | -1.69E-46 |
| MS.gene050228 | MS.gene93385 | 0.840645 | 7.67E-58 | -1.69E-46 |
| MS.gene050231 | MS.gene93385 | 0.804434 | 2.16E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene93385 | 0.886256 | 4.01E-72 | -1.69E-46 |
| MS.gene050319 | MS.gene93385 | -0.824788 | 6.68E-54 | -1.69E-46 |
| MS.gene050330 | MS.gene93385 | -0.836544 | 8.79E-57 | -1.69E-46 |
| MS.gene050397 | MS.gene93385 | 0.830647 | 2.61E-55 | -1.69E-46 |
| MS.gene050438 | MS.gene93385 | 0.802941 | 4.42E-49 | -1.69E-46 |
| MS.gene050464 | MS.gene93385 | 0.830089 | 3.57E-55 | -1.69E-46 |
| MS.gene050516 | MS.gene93385 | 0.834722 | 2.54E-56 | -1.69E-46 |
| MS.gene050529 | MS.gene93385 | 0.832692 | 8.18E-56 | -1.69E-46 |
| MS.gene050558 | MS.gene93385 | 0.869554 | 2.84E-66 | -1.69E-46 |
| MS.gene050560 | MS.gene93385 | 0.818768 | 1.65E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene93385 | -0.836224 | 1.06E-56 | -1.69E-46 |
| MS.gene050642 | MS.gene93385 | 0.855506 | 6.03E-62 | -1.69E-46 |
| MS.gene050650 | MS.gene93385 | 0.809403 | 1.93E-50 | -1.69E-46 |
| MS.gene050787 | MS.gene93385 | 0.810249 | 1.27E-50 | -1.69E-46 |
| MS.gene050820 | MS.gene93385 | 0.827223 | 1.76E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene93385 | 0.818044 | 2.41E-52 | -1.69E-46 |
| MS.gene05119 | MS.gene93385 | -0.820574 | 6.38E-53 | -1.69E-46 |
| MS.gene051471 | MS.gene93385 | 0.843188 | 1.63E-58 | -1.69E-46 |
| MS.gene051662 | MS.gene93385 | 0.848468 | 6.01E-60 | -1.69E-46 |
| MS.gene051663 | MS.gene93385 | 0.858219 | 9.58E-63 | -1.69E-46 |
| MS.gene051860 | MS.gene93385 | 0.899411 | 2.04E-77 | -1.69E-46 |
| MS.gene051983 | MS.gene93385 | 0.859942 | 2.92E-63 | -1.69E-46 |
| MS.gene052011 | MS.gene93385 | -0.826698 | 2.35E-54 | -1.69E-46 |
| MS.gene052077 | MS.gene93385 | 0.822362 | 2.47E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene93385 | 0.841214 | 5.44E-58 | -1.69E-46 |
| MS.gene052178 | MS.gene93385 | 0.857729 | 1.34E-62 | -1.69E-46 |
| MS.gene052188 | MS.gene93385 | 0.835133 | 2.00E-56 | -1.69E-46 |
| MS.gene052207 | MS.gene93385 | 0.833243 | 5.97E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene93385 | 0.845999 | 2.86E-59 | -1.69E-46 |
| MS.gene052255 | MS.gene93385 | 0.826662 | 2.40E-54 | -1.69E-46 |
| MS.gene052310 | MS.gene93385 | 0.816473 | 5.43E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene93385 | 0.80541 | 1.35E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene93385 | 0.82977 | 4.27E-55 | -1.69E-46 |
| MS.gene052600 | MS.gene93385 | 0.808872 | 2.50E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene93385 | 0.800541 | 1.37E-48 | -1.69E-46 |
| MS.gene053557 | MS.gene93385 | 0.838535 | 2.71E-57 | -1.69E-46 |
| MS.gene053836 | MS.gene93385 | 0.912907 | 1.14E-83 | -1.69E-46 |
| MS.gene053907 | MS.gene93385 | 0.824294 | 8.72E-54 | -1.69E-46 |
| MS.gene053928 | MS.gene93385 | 0.828409 | 9.14E-55 | -1.69E-46 |
| MS.gene053971 | MS.gene93385 | 0.806541 | 7.82E-50 | -1.69E-46 |
| MS.gene054010 | MS.gene93385 | 0.821094 | 4.85E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene93385 | 0.843736 | 1.17E-58 | -1.69E-46 |
| MS.gene054012 | MS.gene93385 | 0.843422 | 1.41E-58 | -1.69E-46 |
| MS.gene054013 | MS.gene93385 | 0.835414 | 1.70E-56 | -1.69E-46 |
| MS.gene054123 | MS.gene93385 | 0.809009 | 2.34E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene93385 | 0.819069 | 1.41E-52 | -1.69E-46 |
| MS.gene054184 | MS.gene93385 | 0.835049 | 2.10E-56 | -1.69E-46 |
| MS.gene054185 | MS.gene93385 | 0.842416 | 2.62E-58 | -1.69E-46 |
| MS.gene054214 | MS.gene93385 | 0.806533 | 7.86E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene93385 | 0.856715 | 2.67E-62 | -1.69E-46 |
| MS.gene054667 | MS.gene93385 | 0.800274 | 1.56E-48 | -1.69E-46 |
| MS.gene054930 | MS.gene93385 | 0.841704 | 4.04E-58 | -1.69E-46 |
| MS.gene054942 | MS.gene93385 | 0.862781 | 3.97E-64 | -1.69E-46 |
| MS.gene054983 | MS.gene93385 | 0.844059 | 9.56E-59 | -1.69E-46 |
| MS.gene055116 | MS.gene93385 | 0.810416 | 1.17E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene93385 | 0.869187 | 3.74E-66 | -1.69E-46 |
| MS.gene055358 | MS.gene93385 | 0.812921 | 3.32E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene93385 | 0.853045 | 3.10E-61 | -1.69E-46 |
| MS.gene055422 | MS.gene93385 | 0.897224 | 1.73E-76 | -1.69E-46 |
| MS.gene055428 | MS.gene93385 | 0.872481 | 3.08E-67 | -1.69E-46 |
| MS.gene05553 | MS.gene93385 | 0.809672 | 1.69E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene93385 | 0.878171 | 3.48E-69 | -1.69E-46 |
| MS.gene055712 | MS.gene93385 | 0.823119 | 1.64E-53 | -1.69E-46 |
| MS.gene056069 | MS.gene93385 | -0.837434 | 5.21E-57 | -1.69E-46 |
| MS.gene056191 | MS.gene93385 | 0.817764 | 2.78E-52 | -1.69E-46 |
| MS.gene056314 | MS.gene93385 | 0.807826 | 4.18E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene93385 | 0.801013 | 1.10E-48 | -1.69E-46 |
| MS.gene056612 | MS.gene93385 | 0.861669 | 8.72E-64 | -1.69E-46 |
| MS.gene056659 | MS.gene93385 | 0.820763 | 5.78E-53 | -1.69E-46 |
| MS.gene056723 | MS.gene93385 | 0.810335 | 1.21E-50 | -1.69E-46 |
| MS.gene056875 | MS.gene93385 | 0.816538 | 5.25E-52 | -1.69E-46 |
| MS.gene056902 | MS.gene93385 | 0.805516 | 1.29E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene93385 | 0.860289 | 2.29E-63 | -1.69E-46 |
| MS.gene05702 | MS.gene93385 | 0.840401 | 8.89E-58 | -1.69E-46 |
| MS.gene057121 | MS.gene93385 | 0.886052 | 4.78E-72 | -1.69E-46 |
| MS.gene057245 | MS.gene93385 | 0.864047 | 1.61E-64 | -1.69E-46 |
| MS.gene057260 | MS.gene93385 | 0.829849 | 4.09E-55 | -1.69E-46 |
| MS.gene05733 | MS.gene93385 | 0.800414 | 1.46E-48 | -1.69E-46 |
| MS.gene057439 | MS.gene93385 | 0.86024 | 2.37E-63 | -1.69E-46 |
| MS.gene057469 | MS.gene93385 | 0.853366 | 2.51E-61 | -1.69E-46 |
| MS.gene057754 | MS.gene93385 | 0.805745 | 1.15E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene93385 | 0.880606 | 4.78E-70 | -1.69E-46 |
| MS.gene05811 | MS.gene93385 | 0.886186 | 4.26E-72 | -1.69E-46 |
| MS.gene058139 | MS.gene93385 | 0.816416 | 5.59E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene93385 | 0.878488 | 2.70E-69 | -1.69E-46 |
| MS.gene058233 | MS.gene93385 | 0.807079 | 6.02E-50 | -1.69E-46 |
| MS.gene058276 | MS.gene93385 | 0.821491 | 3.92E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene93385 | 0.831366 | 1.74E-55 | -1.69E-46 |
| MS.gene058710 | MS.gene93385 | 0.847533 | 1.09E-59 | -1.69E-46 |
| MS.gene058749 | MS.gene93385 | 0.859046 | 5.42E-63 | -1.69E-46 |
| MS.gene058833 | MS.gene93385 | 0.826209 | 3.08E-54 | -1.69E-46 |
| MS.gene058845 | MS.gene93385 | 0.855457 | 6.23E-62 | -1.69E-46 |
| MS.gene05886 | MS.gene93385 | 0.828735 | 7.62E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene93385 | 0.868278 | 7.35E-66 | -1.69E-46 |
| MS.gene059247 | MS.gene93385 | 0.803154 | 3.99E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene93385 | 0.817298 | 3.54E-52 | -1.69E-46 |
| MS.gene059294 | MS.gene93385 | 0.814243 | 1.70E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene93385 | 0.814135 | 1.80E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene93385 | 0.87486 | 4.86E-68 | -1.69E-46 |
| MS.gene059597 | MS.gene93385 | 0.846301 | 2.37E-59 | -1.69E-46 |
| MS.gene059676 | MS.gene93385 | 0.812825 | 3.49E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene93385 | 0.808845 | 2.53E-50 | -1.69E-46 |
| MS.gene059692 | MS.gene93385 | 0.825351 | 4.91E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene93385 | 0.821394 | 4.13E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene93385 | 0.90731 | 5.82E-81 | -1.69E-46 |
| MS.gene059894 | MS.gene93385 | 0.863771 | 1.96E-64 | -1.69E-46 |
| MS.gene06037 | MS.gene93385 | 0.83403 | 3.79E-56 | -1.69E-46 |
| MS.gene060407 | MS.gene93385 | 0.810113 | 1.35E-50 | -1.69E-46 |
| MS.gene060476 | MS.gene93385 | 0.844345 | 8.01E-59 | -1.69E-46 |
| MS.gene060994 | MS.gene93385 | 0.835145 | 1.99E-56 | -1.69E-46 |
| MS.gene061000 | MS.gene93385 | 0.830938 | 2.22E-55 | -1.69E-46 |
| MS.gene061049 | MS.gene93385 | 0.891095 | 5.43E-74 | -1.69E-46 |
| MS.gene061085 | MS.gene93385 | 0.806685 | 7.30E-50 | -1.69E-46 |
| MS.gene061114 | MS.gene93385 | -0.80393 | 2.76E-49 | -1.69E-46 |
| MS.gene061159 | MS.gene93385 | 0.807032 | 6.16E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93385.t1 | MTR_4g014750 | 98.253 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 1.02e-168 | 464 |
| MS.gene93385.t1 | MTR_4g014750 | 98.214 | 168 | 3 | 0 | 1 | 168 | 1 | 168 | 1.27e-121 | 342 |
| MS.gene93385.t1 | MTR_1g052405 | 32.680 | 153 | 85 | 4 | 77 | 228 | 190 | 325 | 2.13e-18 | 82.8 |
| MS.gene93385.t1 | MTR_1g492730 | 32.680 | 153 | 87 | 4 | 77 | 228 | 165 | 302 | 4.07e-16 | 75.9 |
| MS.gene93385.t1 | MTR_1g052380 | 30.065 | 153 | 90 | 5 | 77 | 228 | 56 | 192 | 1.11e-14 | 70.9 |
| MS.gene93385.t1 | MTR_3g085620 | 29.143 | 175 | 102 | 5 | 59 | 228 | 16 | 173 | 2.33e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93385.t1 | AT2G38025 | 60.000 | 230 | 81 | 5 | 9 | 228 | 5 | 233 | 1.02e-85 | 254 |
| MS.gene93385.t1 | AT2G38025 | 67.262 | 168 | 49 | 2 | 67 | 228 | 43 | 210 | 2.17e-73 | 222 |
| MS.gene93385.t1 | AT3G57810 | 34.416 | 154 | 83 | 4 | 77 | 229 | 168 | 304 | 3.05e-21 | 90.5 |
| MS.gene93385.t1 | AT3G57810 | 34.416 | 154 | 83 | 4 | 77 | 229 | 168 | 304 | 3.05e-21 | 90.5 |
| MS.gene93385.t1 | AT3G57810 | 34.416 | 154 | 83 | 4 | 77 | 229 | 168 | 304 | 3.05e-21 | 90.5 |
Find 52 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTGGGCAACCTGATTTC+TGG | 0.156112 | 4.1:+81466154 | MS.gene93385:CDS |
| AATCGGAATTCAAGCTTATT+TGG | 0.181024 | 4.1:+81463877 | MS.gene93385:CDS |
| GTATGGAAGTGAATTTAAAA+AGG | 0.264562 | 4.1:+81466731 | MS.gene93385:CDS |
| TTCATTCCGATTGCCGAGTA+TGG | 0.298574 | 4.1:+81466714 | MS.gene93385:CDS |
| TCTGGTATGTACACAATAAT+TGG | 0.313597 | 4.1:-81466533 | None:intergenic |
| CGGTTGCTTCAGTTGTTTCT+CGG | 0.328646 | 4.1:+81463851 | MS.gene93385:CDS |
| AGAGGCGGTGGTCGGGGATC+TGG | 0.355109 | 4.1:+81466690 | MS.gene93385:CDS |
| GATTCTCCTCCCCAGAAATC+AGG | 0.356950 | 4.1:-81466165 | None:intergenic |
| GCAGTTACTGCAGGCGGATT+GGG | 0.359521 | 4.1:+81466139 | MS.gene93385:intron |
| TGCAGTTACTGCAGGCGGAT+TGG | 0.360734 | 4.1:+81466138 | MS.gene93385:intron |
| GATTGGGCAACCTGATTTCT+GGG | 0.372109 | 4.1:+81466155 | MS.gene93385:CDS |
| CAGTTGTTTCTCGGTTTAAT+CGG | 0.374617 | 4.1:+81463860 | MS.gene93385:CDS |
| CATTATGACCTTCTGTTATG+AGG | 0.384606 | 4.1:+81466798 | MS.gene93385:CDS |
| CTCATAACAGAAGGTCATAA+TGG | 0.393100 | 4.1:-81466797 | None:intergenic |
| GCAGCATAGAGGCGGTGGTC+GGG | 0.413029 | 4.1:+81466683 | MS.gene93385:intron |
| GCGGTGTCTGTTTCGTGCTC+TGG | 0.442002 | 4.1:+81465070 | MS.gene93385:CDS |
| GGGAGGAGAATCAGAACTAT+TGG | 0.442300 | 4.1:+81466176 | MS.gene93385:CDS |
| AATTCAAGCTTATTTGGTGT+TGG | 0.442709 | 4.1:+81463883 | MS.gene93385:CDS |
| ATCAACTGTGACAGCAATGA+TGG | 0.457267 | 4.1:-81466011 | None:intergenic |
| TTTAAATTCACTTCCATACT+CGG | 0.461333 | 4.1:-81466727 | None:intergenic |
| ATTCTTAAGCAGTTGAAAGA+TGG | 0.469119 | 4.1:+81463799 | MS.gene93385:CDS |
| CAGCATAGAGGCGGTGGTCG+GGG | 0.476465 | 4.1:+81466684 | MS.gene93385:intron |
| ATTTGAGATTGTTTCTTCAC+CGG | 0.479973 | 4.1:+81463831 | MS.gene93385:CDS |
| TGAAGGCATACCTCATGCTC+TGG | 0.484252 | 4.1:-81466551 | None:intergenic |
| GTTCAGAAAGTTACAGGGGA+TGG | 0.493144 | 4.1:+81465047 | MS.gene93385:CDS |
| CGAGAAACAACTGAAGCAAC+CGG | 0.497549 | 4.1:-81463850 | None:intergenic |
| TCACTTCCATACTCGGCAAT+CGG | 0.507697 | 4.1:-81466720 | None:intergenic |
| TAACACAGATGAACTAAGAA+TGG | 0.521962 | 4.1:+81465934 | MS.gene93385:intron |
| CAAAGGAATGGCTCACAACA+AGG | 0.527955 | 4.1:+81465634 | MS.gene93385:CDS |
| GAAGCTATATGTGAAAATGT+AGG | 0.546789 | 4.1:+81465965 | MS.gene93385:CDS |
| TTCAGAAAGTTACAGGGGAT+GGG | 0.550770 | 4.1:+81465048 | MS.gene93385:CDS |
| ATGAAATCAGGTCAAAGGAA+TGG | 0.557639 | 4.1:+81465622 | MS.gene93385:intron |
| GTTCAATGAAATCAGGTCAA+AGG | 0.558258 | 4.1:+81465617 | MS.gene93385:intron |
| TGCAGCATAGAGGCGGTGGT+CGG | 0.570182 | 4.1:+81466682 | MS.gene93385:intron |
| GGGCAACCTGATTTCTGGGG+AGG | 0.583375 | 4.1:+81466159 | MS.gene93385:CDS |
| AATGGCTCACAACAAGGGAA+TGG | 0.600900 | 4.1:+81465640 | MS.gene93385:CDS |
| AAAATGCAGCATAGAGGCGG+TGG | 0.608132 | 4.1:+81466678 | MS.gene93385:intron |
| TTTCAGTTCAGAAAGTTACA+GGG | 0.613627 | 4.1:+81465042 | MS.gene93385:CDS |
| TTTGCTGCAGTTACTGCAGG+CGG | 0.617614 | 4.1:+81466133 | MS.gene93385:intron |
| TCTAAAACACACCGTTGCAG+AGG | 0.622955 | 4.1:-81466037 | None:intergenic |
| ATACAATTCCTCATAACAGA+AGG | 0.623406 | 4.1:-81466806 | None:intergenic |
| CGCGAGGAGAGAGAAAATGC+AGG | 0.629042 | 4.1:+81465674 | MS.gene93385:CDS |
| TTCAGTTCAGAAAGTTACAG+GGG | 0.629669 | 4.1:+81465043 | MS.gene93385:CDS |
| TGTGTACATACCAGAGCATG+AGG | 0.636499 | 4.1:+81466541 | MS.gene93385:CDS |
| CAGTTGATGAGCCTCTGCAA+CGG | 0.648167 | 4.1:+81466026 | MS.gene93385:CDS |
| ATTGGGCAACCTGATTTCTG+GGG | 0.653227 | 4.1:+81466156 | MS.gene93385:CDS |
| AAAGGAATGGCTCACAACAA+GGG | 0.664021 | 4.1:+81465635 | MS.gene93385:CDS |
| ATGGCGCAAAAGCTTCTCAA+CGG | 0.671372 | 4.1:+81463668 | MS.gene93385:CDS |
| AGAAAGTTACAGGGGATGGG+CGG | 0.674418 | 4.1:+81465051 | MS.gene93385:CDS |
| AATGGCTCTTAACCAACGCG+AGG | 0.698050 | 4.1:+81465658 | MS.gene93385:CDS |
| GCTGTGAGGCTATTGTTCAG+CGG | 0.720718 | 4.1:+81466768 | MS.gene93385:CDS |
| GTTCTAGCAGAAAAGCTGTG+AGG | 0.757620 | 4.1:+81466754 | MS.gene93385:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAATAT+AGG | - | chr4.1:81465842-81465861 | None:intergenic | 0.0% |
| !! | AAAGATAAAAATTGATAAAA+AGG | - | chr4.1:81465184-81465203 | None:intergenic | 10.0% |
| !! | TCAATAAAATATAATCAAAA+AGG | - | chr4.1:81464651-81464670 | None:intergenic | 10.0% |
| !!! | TATCTAACTAATATTTTATA+AGG | + | chr4.1:81466603-81466622 | MS.gene93385:intron | 10.0% |
| !!! | TTTATTAATTTCACTTTTTT+GGG | + | chr4.1:81463980-81463999 | MS.gene93385:intron | 10.0% |
| !!! | ACTAAATAGATTTTCTTATT+TGG | + | chr4.1:81466249-81466268 | MS.gene93385:intron | 15.0% |
| !!! | CTTTATTAATTTCACTTTTT+TGG | + | chr4.1:81463979-81463998 | MS.gene93385:intron | 15.0% |
| !!! | GTTTTTCAAATTAATTTTAG+AGG | + | chr4.1:81465578-81465597 | MS.gene93385:intron | 15.0% |
| !!! | TAATAAAGATTGAATTTTGT+TGG | - | chr4.1:81463967-81463986 | None:intergenic | 15.0% |
| !!! | TATCTTCTATTAGTTTTTTA+TGG | - | chr4.1:81464545-81464564 | None:intergenic | 15.0% |
| !! | AAAATGAAAACAAAGTGAAT+GGG | - | chr4.1:81465887-81465906 | None:intergenic | 20.0% |
| !! | AATTTAACAAACAAAATTCC+AGG | - | chr4.1:81464724-81464743 | None:intergenic | 20.0% |
| !! | ATTAGCAGTGTTAAAAAATT+AGG | - | chr4.1:81463733-81463752 | None:intergenic | 20.0% |
| !! | ATTTAACAAACAAAATTCCA+GGG | - | chr4.1:81464723-81464742 | None:intergenic | 20.0% |
| !! | GTGAAAAAAATCTATAACAA+AGG | - | chr4.1:81465114-81465133 | None:intergenic | 20.0% |
| !! | TATGGAAGTGAATTTAAAAA+GGG | + | chr4.1:81466732-81466751 | MS.gene93385:CDS | 20.0% |
| !! | TTAGCAGTGTTAAAAAATTA+GGG | - | chr4.1:81463732-81463751 | None:intergenic | 20.0% |
| !! | TTTCATGAATTTATCCTTAT+GGG | + | chr4.1:81464743-81464762 | MS.gene93385:intron | 20.0% |
| !! | TTTGATATATTTAGAGACAA+TGG | + | chr4.1:81464578-81464597 | MS.gene93385:intron | 20.0% |
| !! | TTTGTATTTAATGCAATGAT+TGG | + | chr4.1:81466101-81466120 | MS.gene93385:intron | 20.0% |
| !!! | AAACTAAGTATTGTTTTTGA+AGG | - | chr4.1:81466571-81466590 | None:intergenic | 20.0% |
| !!! | AAATTAATTTTAGAGGTAAG+CGG | + | chr4.1:81465585-81465604 | MS.gene93385:intron | 20.0% |
| !!! | AATTTGAACTCTTTTCTTAA+TGG | + | chr4.1:81464925-81464944 | MS.gene93385:intron | 20.0% |
| !!! | AGATCTTAATTTTCTGTTAA+TGG | - | chr4.1:81466065-81466084 | None:intergenic | 20.0% |
| !!! | ATATTTTATTGATCCTTTGT+TGG | + | chr4.1:81464659-81464678 | MS.gene93385:intron | 20.0% |
| !!! | CAATACTTAGTTTTATCATT+TGG | + | chr4.1:81466578-81466597 | MS.gene93385:intron | 20.0% |
| !!! | TATTTTATTGATCCTTTGTT+GGG | + | chr4.1:81464660-81464679 | MS.gene93385:intron | 20.0% |
| !!! | TTACATATAGCAGATTTTTA+TGG | - | chr4.1:81465512-81465531 | None:intergenic | 20.0% |
| !!! | TTTTCATGAATTTATCCTTA+TGG | + | chr4.1:81464742-81464761 | MS.gene93385:intron | 20.0% |
| ! | AAAGTGAATGGGAAAAATAA+AGG | - | chr4.1:81465876-81465895 | None:intergenic | 25.0% |
| ! | AACAGAAAATTAAGATCTTG+AGG | + | chr4.1:81466067-81466086 | MS.gene93385:intron | 25.0% |
| ! | AACTGAACTTATATATTGCT+AGG | - | chr4.1:81465426-81465445 | None:intergenic | 25.0% |
| ! | AGAAAATCTATTTAGTCCTT+AGG | - | chr4.1:81466245-81466264 | None:intergenic | 25.0% |
| ! | ATCAATGTCCATATTCTTTA+AGG | + | chr4.1:81466487-81466506 | MS.gene93385:intron | 25.0% |
| ! | CACAAAAAATATTGTCAAGT+AGG | + | chr4.1:81465336-81465355 | MS.gene93385:intron | 25.0% |
| ! | GAAAATGAAAACAAAGTGAA+TGG | - | chr4.1:81465888-81465907 | None:intergenic | 25.0% |
| ! | GTATGGAAGTGAATTTAAAA+AGG | + | chr4.1:81466731-81466750 | MS.gene93385:CDS | 25.0% |
| ! | TAACAAAACCAACTAAAGAA+TGG | - | chr4.1:81464493-81464512 | None:intergenic | 25.0% |
| ! | TGAAAGCAAAACAAACAAAA+GGG | - | chr4.1:81465738-81465757 | None:intergenic | 25.0% |
| ! | TTCATGAATTTATCCTTATG+GGG | + | chr4.1:81464744-81464763 | MS.gene93385:intron | 25.0% |
| ! | TTTAAATTCACTTCCATACT+CGG | - | chr4.1:81466730-81466749 | None:intergenic | 25.0% |
| ! | TTTAACAAACAAAATTCCAG+GGG | - | chr4.1:81464722-81464741 | None:intergenic | 25.0% |
| ! | TTTGCATGAATGTGTAATTA+GGG | + | chr4.1:81464041-81464060 | MS.gene93385:intron | 25.0% |
| !! | ATTGTCTTTTCTGCTAAAAA+AGG | + | chr4.1:81464880-81464899 | MS.gene93385:intron | 25.0% |
| !! | TGTTGAATATAAGCCTTTTA+AGG | + | chr4.1:81464796-81464815 | MS.gene93385:intron | 25.0% |
| !! | TTTTCTTTCCTTTCCTTAAA+AGG | - | chr4.1:81464812-81464831 | None:intergenic | 25.0% |
| !!! | AAAGGTATCTTCATCAATAA+TGG | + | chr4.1:81464898-81464917 | MS.gene93385:intron | 25.0% |
| !!! | AATATAAGCCTTTTAAGGAA+AGG | + | chr4.1:81464801-81464820 | MS.gene93385:intron | 25.0% |
| !!! | CTACTTGACAATATTTTTTG+TGG | - | chr4.1:81465338-81465357 | None:intergenic | 25.0% |
| !!! | GGATTTTAGAATTACAGATT+TGG | + | chr4.1:81464766-81464785 | MS.gene93385:intron | 25.0% |
| !!! | TTTTTATGGACTGACATATT+TGG | - | chr4.1:81465498-81465517 | None:intergenic | 25.0% |
| AAACTAAAAATGCAGCATAG+AGG | + | chr4.1:81466672-81466691 | MS.gene93385:intron | 30.0% | |
| AATCGGAATTCAAGCTTATT+TGG | + | chr4.1:81463877-81463896 | MS.gene93385:CDS | 30.0% | |
| ACGAAGAATTGTGAAACTAA+AGG | - | chr4.1:81464350-81464369 | None:intergenic | 30.0% | |
| AGAATATGCCATTCTTTAGT+TGG | + | chr4.1:81464482-81464501 | MS.gene93385:intron | 30.0% | |
| ATTCTTAAGCAGTTGAAAGA+TGG | + | chr4.1:81463799-81463818 | MS.gene93385:CDS | 30.0% | |
| CTAATTACACATTCATGCAA+AGG | - | chr4.1:81464042-81464061 | None:intergenic | 30.0% | |
| CTGAAAGCAAAACAAACAAA+AGG | - | chr4.1:81465739-81465758 | None:intergenic | 30.0% | |
| CTTCAATCCAATTGATGTAT+CGG | + | chr4.1:81465467-81465486 | MS.gene93385:intron | 30.0% | |
| CTTTGCATGAATGTGTAATT+AGG | + | chr4.1:81464040-81464059 | MS.gene93385:intron | 30.0% | |
| GAAAGCAAAACAAACAAAAG+GGG | - | chr4.1:81465737-81465756 | None:intergenic | 30.0% | |
| GAAGCTATATGTGAAAATGT+AGG | + | chr4.1:81465965-81465984 | MS.gene93385:CDS | 30.0% | |
| GATAAACTAGCAATAAGACA+TGG | + | chr4.1:81465703-81465722 | MS.gene93385:intron | 30.0% | |
| GCTGAAAAAGAAAACTATCT+TGG | - | chr4.1:81464180-81464199 | None:intergenic | 30.0% | |
| TAAACAACCATTGTAGTACT+TGG | + | chr4.1:81464394-81464413 | MS.gene93385:intron | 30.0% | |
| TAACACAGATGAACTAAGAA+TGG | + | chr4.1:81465934-81465953 | MS.gene93385:intron | 30.0% | |
| TAATTAGGGTCTCTTTGAAT+TGG | + | chr4.1:81464055-81464074 | MS.gene93385:intron | 30.0% | |
| TACAATGGTTGTTTACTCTA+AGG | - | chr4.1:81464389-81464408 | None:intergenic | 30.0% | |
| TACATCAATTGGATTGAAGA+CGG | - | chr4.1:81465466-81465485 | None:intergenic | 30.0% | |
| TAGTTCATCTGTGTTATCAT+GGG | - | chr4.1:81465930-81465949 | None:intergenic | 30.0% | |
| TATAACAAAGGCAATGAAGA+TGG | - | chr4.1:81465102-81465121 | None:intergenic | 30.0% | |
| TCATGAATTTATCCTTATGG+GGG | + | chr4.1:81464745-81464764 | MS.gene93385:intron | 30.0% | |
| TCTGGTATGTACACAATAAT+TGG | - | chr4.1:81466536-81466555 | None:intergenic | 30.0% | |
| TGACAGTACCTTAAAGAATA+TGG | - | chr4.1:81466498-81466517 | None:intergenic | 30.0% | |
| TTAGTTCATCTGTGTTATCA+TGG | - | chr4.1:81465931-81465950 | None:intergenic | 30.0% | |
| TTTCAGTTCAGAAAGTTACA+GGG | + | chr4.1:81465042-81465061 | MS.gene93385:CDS | 30.0% | |
| ! | AGACTTTATTTACAAGCTTC+TGG | + | chr4.1:81465260-81465279 | MS.gene93385:intron | 30.0% |
| ! | ATTTGAGATTGTTTCTTCAC+CGG | + | chr4.1:81463831-81463850 | MS.gene93385:CDS | 30.0% |
| ! | GCAAGATGTTTCTGATATTT+AGG | + | chr4.1:81464833-81464852 | MS.gene93385:intron | 30.0% |
| ! | TTTTCAGTTCAGAAAGTTAC+AGG | + | chr4.1:81465041-81465060 | MS.gene93385:CDS | 30.0% |
| !! | AATTCAAGCTTATTTGGTGT+TGG | + | chr4.1:81463883-81463902 | MS.gene93385:CDS | 30.0% |
| !! | TAATTCTAAAATCCCCCATA+AGG | - | chr4.1:81464760-81464779 | None:intergenic | 30.0% |
| !!! | AGTTTTATCTGTTGACTCAT+TGG | - | chr4.1:81466357-81466376 | None:intergenic | 30.0% |
| !!! | GTTTGTTTTGCTTTCAGTTA+AGG | + | chr4.1:81465742-81465761 | MS.gene93385:intron | 30.0% |
| !!! | GTTTTATCTGTTGACTCATT+GGG | - | chr4.1:81466356-81466375 | None:intergenic | 30.0% |
| AAAGTCTAACCCTAGAATCA+AGG | - | chr4.1:81465247-81465266 | None:intergenic | 35.0% | |
| AACACATCCAAGTACTACAA+TGG | - | chr4.1:81464404-81464423 | None:intergenic | 35.0% | |
| ACTAAATTGATCCACGTAAG+AGG | - | chr4.1:81464459-81464478 | None:intergenic | 35.0% | |
| AGATTCCTTTCTACAGCAAA+AGG | - | chr4.1:81464316-81464335 | None:intergenic | 35.0% | |
| ATGAAATCAGGTCAAAGGAA+TGG | + | chr4.1:81465622-81465641 | MS.gene93385:intron | 35.0% | |
| ATGTGTTGTGTACTTGTGTT+TGG | + | chr4.1:81464960-81464979 | MS.gene93385:intron | 35.0% | |
| ATTCCAGGGGTAATAATTTG+AGG | - | chr4.1:81464709-81464728 | None:intergenic | 35.0% | |
| ATTCGGCTACAAAACTGAAA+AGG | - | chr4.1:81465136-81465155 | None:intergenic | 35.0% | |
| ATTGAACTGCCTTGATTCTA+GGG | + | chr4.1:81465235-81465254 | MS.gene93385:intron | 35.0% | |
| GTGACACAATTCACACATTA+AGG | + | chr4.1:81464600-81464619 | MS.gene93385:intron | 35.0% | |
| GTTCAATGAAATCAGGTCAA+AGG | + | chr4.1:81465617-81465636 | MS.gene93385:intron | 35.0% | |
| TATTGAACTGCCTTGATTCT+AGG | + | chr4.1:81465234-81465253 | MS.gene93385:intron | 35.0% | |
| TCCTTTGTTGGGAAAGAAAA+TGG | + | chr4.1:81464671-81464690 | MS.gene93385:intron | 35.0% | |
| TTACCTCAAATTATTACCCC+TGG | + | chr4.1:81464703-81464722 | MS.gene93385:intron | 35.0% | |
| TTCAGTTCAGAAAGTTACAG+GGG | + | chr4.1:81465043-81465062 | MS.gene93385:CDS | 35.0% | |
| TTGTAGTACTTGGATGTGTT+AGG | + | chr4.1:81464404-81464423 | MS.gene93385:intron | 35.0% | |
| ! | ACAGTTGGTTCAATGAAATC+AGG | + | chr4.1:81465610-81465629 | MS.gene93385:intron | 35.0% |
| ! | ACCATTTTCTTTCCCAACAA+AGG | - | chr4.1:81464675-81464694 | None:intergenic | 35.0% |
| ! | AGCGTGTATATGTAGTTTTC+CGG | + | chr4.1:81465787-81465806 | MS.gene93385:intron | 35.0% |
| ! | GGCATAAGTTTTACGATGAT+TGG | + | chr4.1:81464098-81464117 | MS.gene93385:intron | 35.0% |
| !! | AGACGGATTATGTCATTAGA+TGG | - | chr4.1:81465449-81465468 | None:intergenic | 35.0% |
| !! | CAGTTGTTTCTCGGTTTAAT+CGG | + | chr4.1:81463860-81463879 | MS.gene93385:CDS | 35.0% |
| !!! | ACTCACTTTTTCGCTAGAAT+TGG | + | chr4.1:81463916-81463935 | MS.gene93385:CDS | 35.0% |
| AAAAGGAACTCACTCGTGTT+TGG | - | chr4.1:81464299-81464318 | None:intergenic | 40.0% | |
| AAAGGAATGGCTCACAACAA+GGG | + | chr4.1:81465635-81465654 | MS.gene93385:CDS | 40.0% | |
| AGAAAGGAATCTTTCACACG+AGG | + | chr4.1:81464324-81464343 | MS.gene93385:intron | 40.0% | |
| ATCAACTGTGACAGCAATGA+TGG | - | chr4.1:81466014-81466033 | None:intergenic | 40.0% | |
| ATCATTGAATGCCTCTTACG+TGG | + | chr4.1:81464445-81464464 | MS.gene93385:intron | 40.0% | |
| CTAAAAATGCAGCATAGAGG+CGG | + | chr4.1:81466675-81466694 | MS.gene93385:intron | 40.0% | |
| GACATTTGAATCCTCAGACT+CGG | + | chr4.1:81463762-81463781 | MS.gene93385:intron | 40.0% | |
| GCTCAAACTAATGAAGGACT+TGG | - | chr4.1:81465539-81465558 | None:intergenic | 40.0% | |
| GCTTATTTGAGCTTATCTGC+TGG | + | chr4.1:81464077-81464096 | MS.gene93385:intron | 40.0% | |
| GCTTGCATATTTGTCTCCTA+AGG | + | chr4.1:81466226-81466245 | MS.gene93385:intron | 40.0% | |
| GGACTAAAATGACCAGTACT+CGG | + | chr4.1:81464621-81464640 | MS.gene93385:intron | 40.0% | |
| GTGGAAGCTCAAACTAATGA+AGG | - | chr4.1:81465545-81465564 | None:intergenic | 40.0% | |
| TCTCAGCTCAATAGTTGAAC+CGG | - | chr4.1:81465809-81465828 | None:intergenic | 40.0% | |
| TTCAGAAAGTTACAGGGGAT+GGG | + | chr4.1:81465048-81465067 | MS.gene93385:CDS | 40.0% | |
| TTGAAAAACTCGCTTCGCTA+TGG | - | chr4.1:81465567-81465586 | None:intergenic | 40.0% | |
| ! | TATTTTGCTGCAGTTACTGC+AGG | + | chr4.1:81466130-81466149 | MS.gene93385:intron | 40.0% |
| !! | GAGTTCCTTTTGCTGTAGAA+AGG | + | chr4.1:81464308-81464327 | MS.gene93385:intron | 40.0% |
| !! | TTCAGTTTTGTAGCCGAATG+CGG | + | chr4.1:81465137-81465156 | MS.gene93385:intron | 40.0% |
| AAAAACTCGCTTCGCTATGG+TGG | - | chr4.1:81465564-81465583 | None:intergenic | 45.0% | |
| AATGGCTCACAACAAGGGAA+TGG | + | chr4.1:81465640-81465659 | MS.gene93385:CDS | 45.0% | |
| AGGAGACAAATATGCAAGCG+TGG | - | chr4.1:81466225-81466244 | None:intergenic | 45.0% | |
| ATCATCATTCTCCGAGTCTG+AGG | - | chr4.1:81463776-81463795 | None:intergenic | 45.0% | |
| ATGGCGCAAAAGCTTCTCAA+CGG | + | chr4.1:81463668-81463687 | MS.gene93385:CDS | 45.0% | |
| ATTGGGCAACCTGATTTCTG+GGG | + | chr4.1:81466156-81466175 | MS.gene93385:CDS | 45.0% | |
| CAAAAAGGATAGCCGAGTAC+TGG | - | chr4.1:81464636-81464655 | None:intergenic | 45.0% | |
| CAAAGGAATGGCTCACAACA+AGG | + | chr4.1:81465634-81465653 | MS.gene93385:CDS | 45.0% | |
| CACTGTGAGAACATAAGGAG+AGG | - | chr4.1:81464986-81465005 | None:intergenic | 45.0% | |
| CGAGAAACAACTGAAGCAAC+CGG | - | chr4.1:81463853-81463872 | None:intergenic | 45.0% | |
| CTCTCCTTATGTTCTCACAG+TGG | + | chr4.1:81464984-81465003 | MS.gene93385:intron | 45.0% | |
| GATTGGGCAACCTGATTTCT+GGG | + | chr4.1:81466155-81466174 | MS.gene93385:CDS | 45.0% | |
| GGGAGGAGAATCAGAACTAT+TGG | + | chr4.1:81466176-81466195 | MS.gene93385:CDS | 45.0% | |
| GGTGAGACCGATACATCAAT+TGG | - | chr4.1:81465477-81465496 | None:intergenic | 45.0% | |
| GTTCAGAAAGTTACAGGGGA+TGG | + | chr4.1:81465047-81465066 | MS.gene93385:CDS | 45.0% | |
| GTTCTAGCAGAAAAGCTGTG+AGG | + | chr4.1:81466754-81466773 | MS.gene93385:CDS | 45.0% | |
| TCACTTCCATACTCGGCAAT+CGG | - | chr4.1:81466723-81466742 | None:intergenic | 45.0% | |
| TCCACCACTGTGAGAACATA+AGG | - | chr4.1:81464991-81465010 | None:intergenic | 45.0% | |
| TCCTTATGTTCTCACAGTGG+TGG | + | chr4.1:81464987-81465006 | MS.gene93385:intron | 45.0% | |
| TGTGTACATACCAGAGCATG+AGG | + | chr4.1:81466541-81466560 | MS.gene93385:CDS | 45.0% | |
| TTCATTCCGATTGCCGAGTA+TGG | + | chr4.1:81466714-81466733 | MS.gene93385:CDS | 45.0% | |
| ! | TCTAAAACACACCGTTGCAG+AGG | - | chr4.1:81466040-81466059 | None:intergenic | 45.0% |
| !! | CGGTTGCTTCAGTTGTTTCT+CGG | + | chr4.1:81463851-81463870 | MS.gene93385:CDS | 45.0% |
| !! | TCAGTTTTGTAGCCGAATGC+GGG | + | chr4.1:81465138-81465157 | MS.gene93385:intron | 45.0% |
| AAAATGCAGCATAGAGGCGG+TGG | + | chr4.1:81466678-81466697 | MS.gene93385:intron | 50.0% | |
| AATGGCTCTTAACCAACGCG+AGG | + | chr4.1:81465658-81465677 | MS.gene93385:CDS | 50.0% | |
| AGAAAGTTACAGGGGATGGG+CGG | + | chr4.1:81465051-81465070 | MS.gene93385:CDS | 50.0% | |
| ATCCAATCAGCACCCGCATT+CGG | - | chr4.1:81465153-81465172 | None:intergenic | 50.0% | |
| GATTCTCCTCCCCAGAAATC+AGG | - | chr4.1:81466168-81466187 | None:intergenic | 50.0% | |
| GCTGTGAGGCTATTGTTCAG+CGG | + | chr4.1:81466768-81466787 | MS.gene93385:CDS | 50.0% | |
| GGATTGGGCAACCTGATTTC+TGG | + | chr4.1:81466154-81466173 | MS.gene93385:CDS | 50.0% | |
| TAGAGGTAAGCGGTGACAGT+TGG | + | chr4.1:81465595-81465614 | MS.gene93385:intron | 50.0% | |
| TTTGCTGCAGTTACTGCAGG+CGG | + | chr4.1:81466133-81466152 | MS.gene93385:intron | 50.0% | |
| ! | CATTTTCTCTCTCCTCGCGT+TGG | - | chr4.1:81465673-81465692 | None:intergenic | 50.0% |
| ! | TGAAGGCATACCTCATGCTC+TGG | - | chr4.1:81466554-81466573 | None:intergenic | 50.0% |
| !! | CAGTTGATGAGCCTCTGCAA+CGG | + | chr4.1:81466026-81466045 | MS.gene93385:CDS | 50.0% |
| CGCGAGGAGAGAGAAAATGC+AGG | + | chr4.1:81465674-81465693 | MS.gene93385:CDS | 55.0% | |
| TGCAGTTACTGCAGGCGGAT+TGG | + | chr4.1:81466138-81466157 | MS.gene93385:intron | 55.0% | |
| ! | GCAGTTACTGCAGGCGGATT+GGG | + | chr4.1:81466139-81466158 | MS.gene93385:intron | 55.0% |
| GCGGTGTCTGTTTCGTGCTC+TGG | + | chr4.1:81465070-81465089 | MS.gene93385:CDS | 60.0% | |
| TGCAGCATAGAGGCGGTGGT+CGG | + | chr4.1:81466682-81466701 | MS.gene93385:intron | 60.0% | |
| ! | GGGCAACCTGATTTCTGGGG+AGG | + | chr4.1:81466159-81466178 | MS.gene93385:CDS | 60.0% |
| !! | AGCCGAATGCGGGTGCTGAT+TGG | + | chr4.1:81465148-81465167 | MS.gene93385:intron | 60.0% |
| CAGCATAGAGGCGGTGGTCG+GGG | + | chr4.1:81466684-81466703 | MS.gene93385:intron | 65.0% | |
| GCAGCATAGAGGCGGTGGTC+GGG | + | chr4.1:81466683-81466702 | MS.gene93385:intron | 65.0% | |
| AGAGGCGGTGGTCGGGGATC+TGG | + | chr4.1:81466690-81466709 | MS.gene93385:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 81463668 | 81466818 | 81463668 | ID=MS.gene93385 |
| chr4.1 | mRNA | 81463668 | 81466818 | 81463668 | ID=MS.gene93385.t1;Parent=MS.gene93385 |
| chr4.1 | exon | 81463668 | 81463689 | 81463668 | ID=MS.gene93385.t1.exon1;Parent=MS.gene93385.t1 |
| chr4.1 | CDS | 81463668 | 81463689 | 81463668 | ID=cds.MS.gene93385.t1;Parent=MS.gene93385.t1 |
| chr4.1 | exon | 81463779 | 81463947 | 81463779 | ID=MS.gene93385.t1.exon2;Parent=MS.gene93385.t1 |
| chr4.1 | CDS | 81463779 | 81463947 | 81463779 | ID=cds.MS.gene93385.t1;Parent=MS.gene93385.t1 |
| chr4.1 | exon | 81465004 | 81465091 | 81465004 | ID=MS.gene93385.t1.exon3;Parent=MS.gene93385.t1 |
| chr4.1 | CDS | 81465004 | 81465091 | 81465004 | ID=cds.MS.gene93385.t1;Parent=MS.gene93385.t1 |
| chr4.1 | exon | 81465632 | 81465695 | 81465632 | ID=MS.gene93385.t1.exon4;Parent=MS.gene93385.t1 |
| chr4.1 | CDS | 81465632 | 81465695 | 81465632 | ID=cds.MS.gene93385.t1;Parent=MS.gene93385.t1 |
| chr4.1 | exon | 81465942 | 81466047 | 81465942 | ID=MS.gene93385.t1.exon5;Parent=MS.gene93385.t1 |
| chr4.1 | CDS | 81465942 | 81466047 | 81465942 | ID=cds.MS.gene93385.t1;Parent=MS.gene93385.t1 |
| chr4.1 | exon | 81466143 | 81466197 | 81466143 | ID=MS.gene93385.t1.exon6;Parent=MS.gene93385.t1 |
| chr4.1 | CDS | 81466143 | 81466197 | 81466143 | ID=cds.MS.gene93385.t1;Parent=MS.gene93385.t1 |
| chr4.1 | exon | 81466509 | 81466562 | 81466509 | ID=MS.gene93385.t1.exon7;Parent=MS.gene93385.t1 |
| chr4.1 | CDS | 81466509 | 81466562 | 81466509 | ID=cds.MS.gene93385.t1;Parent=MS.gene93385.t1 |
| chr4.1 | exon | 81466687 | 81466818 | 81466687 | ID=MS.gene93385.t1.exon8;Parent=MS.gene93385.t1 |
| chr4.1 | CDS | 81466687 | 81466818 | 81466687 | ID=cds.MS.gene93385.t1;Parent=MS.gene93385.t1 |
| Gene Sequence |
| Protein sequence |
