Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63507.t1 | AES71017.2 | 98.3 | 533 | 9 | 0 | 1 | 533 | 1 | 533 | 4.10E-307 | 1063.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63507.t1 | F4K2A1 | 61.2 | 541 | 171 | 8 | 2 | 533 | 61 | 571 | 2.5e-180 | 633.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63507.t1 | G7J9Z3 | 98.3 | 533 | 9 | 0 | 1 | 533 | 1 | 533 | 3.0e-307 | 1063.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene63507 | 0.860401 | 2.12E-63 | -1.69E-46 |
| MS.gene049151 | MS.gene63507 | 0.84209 | 3.20E-58 | -1.69E-46 |
| MS.gene049153 | MS.gene63507 | 0.85468 | 1.05E-61 | -1.69E-46 |
| MS.gene049195 | MS.gene63507 | 0.828043 | 1.12E-54 | -1.69E-46 |
| MS.gene049233 | MS.gene63507 | 0.814121 | 1.81E-51 | -1.69E-46 |
| MS.gene049260 | MS.gene63507 | 0.814265 | 1.68E-51 | -1.69E-46 |
| MS.gene049297 | MS.gene63507 | 0.842297 | 2.82E-58 | -1.69E-46 |
| MS.gene04933 | MS.gene63507 | 0.857793 | 1.28E-62 | -1.69E-46 |
| MS.gene049346 | MS.gene63507 | 0.831248 | 1.86E-55 | -1.69E-46 |
| MS.gene049378 | MS.gene63507 | 0.861476 | 9.99E-64 | -1.69E-46 |
| MS.gene049426 | MS.gene63507 | 0.841014 | 6.14E-58 | -1.69E-46 |
| MS.gene049758 | MS.gene63507 | 0.887668 | 1.17E-72 | -1.69E-46 |
| MS.gene049910 | MS.gene63507 | 0.883756 | 3.43E-71 | -1.69E-46 |
| MS.gene049915 | MS.gene63507 | 0.823776 | 1.15E-53 | -1.69E-46 |
| MS.gene050168 | MS.gene63507 | 0.816856 | 4.46E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene63507 | 0.865851 | 4.38E-65 | -1.69E-46 |
| MS.gene050227 | MS.gene63507 | 0.870826 | 1.09E-66 | -1.69E-46 |
| MS.gene050228 | MS.gene63507 | 0.865343 | 6.33E-65 | -1.69E-46 |
| MS.gene050301 | MS.gene63507 | 0.879141 | 1.59E-69 | -1.69E-46 |
| MS.gene050330 | MS.gene63507 | -0.843905 | 1.05E-58 | -1.69E-46 |
| MS.gene050397 | MS.gene63507 | 0.800808 | 1.21E-48 | -1.69E-46 |
| MS.gene050442 | MS.gene63507 | 0.839727 | 1.33E-57 | -1.69E-46 |
| MS.gene050464 | MS.gene63507 | 0.8133 | 2.75E-51 | -1.69E-46 |
| MS.gene050516 | MS.gene63507 | 0.811061 | 8.45E-51 | -1.69E-46 |
| MS.gene050529 | MS.gene63507 | 0.806421 | 8.29E-50 | -1.69E-46 |
| MS.gene050558 | MS.gene63507 | 0.88464 | 1.61E-71 | -1.69E-46 |
| MS.gene050560 | MS.gene63507 | 0.833715 | 4.55E-56 | -1.69E-46 |
| MS.gene050623 | MS.gene63507 | -0.837937 | 3.87E-57 | -1.69E-46 |
| MS.gene050642 | MS.gene63507 | 0.855467 | 6.19E-62 | -1.69E-46 |
| MS.gene050650 | MS.gene63507 | 0.822267 | 2.60E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene63507 | 0.839499 | 1.53E-57 | -1.69E-46 |
| MS.gene050680 | MS.gene63507 | 0.805583 | 1.24E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene63507 | 0.817412 | 3.34E-52 | -1.69E-46 |
| MS.gene050787 | MS.gene63507 | 0.859833 | 3.15E-63 | -1.69E-46 |
| MS.gene050820 | MS.gene63507 | 0.875267 | 3.53E-68 | -1.69E-46 |
| MS.gene050953 | MS.gene63507 | 0.812485 | 4.14E-51 | -1.69E-46 |
| MS.gene05119 | MS.gene63507 | -0.863365 | 2.62E-64 | -1.69E-46 |
| MS.gene051257 | MS.gene63507 | 0.812367 | 4.39E-51 | -1.69E-46 |
| MS.gene051265 | MS.gene63507 | 0.813116 | 3.01E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene63507 | 0.801514 | 8.69E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene63507 | 0.81744 | 3.29E-52 | -1.69E-46 |
| MS.gene051568 | MS.gene63507 | 0.814643 | 1.39E-51 | -1.69E-46 |
| MS.gene051582 | MS.gene63507 | 0.86059 | 1.86E-63 | -1.69E-46 |
| MS.gene051662 | MS.gene63507 | 0.820703 | 5.96E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene63507 | 0.865612 | 5.20E-65 | -1.69E-46 |
| MS.gene051860 | MS.gene63507 | 0.897065 | 2.02E-76 | -1.69E-46 |
| MS.gene051983 | MS.gene63507 | 0.877342 | 6.79E-69 | -1.69E-46 |
| MS.gene052011 | MS.gene63507 | -0.850006 | 2.24E-60 | -1.69E-46 |
| MS.gene052077 | MS.gene63507 | 0.86067 | 1.76E-63 | -1.69E-46 |
| MS.gene052176 | MS.gene63507 | 0.848994 | 4.30E-60 | -1.69E-46 |
| MS.gene052188 | MS.gene63507 | 0.857867 | 1.22E-62 | -1.69E-46 |
| MS.gene052207 | MS.gene63507 | 0.856131 | 3.96E-62 | -1.69E-46 |
| MS.gene052253 | MS.gene63507 | 0.857389 | 1.69E-62 | -1.69E-46 |
| MS.gene052255 | MS.gene63507 | 0.836349 | 9.86E-57 | -1.69E-46 |
| MS.gene052309 | MS.gene63507 | -0.820563 | 6.42E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene63507 | 0.804307 | 2.30E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene63507 | 0.835993 | 1.21E-56 | -1.69E-46 |
| MS.gene052376 | MS.gene63507 | 0.80694 | 6.45E-50 | -1.69E-46 |
| MS.gene052389 | MS.gene63507 | 0.830363 | 3.06E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene63507 | 0.814652 | 1.38E-51 | -1.69E-46 |
| MS.gene052778 | MS.gene63507 | 0.816738 | 4.74E-52 | -1.69E-46 |
| MS.gene053184 | MS.gene63507 | 0.826163 | 3.15E-54 | -1.69E-46 |
| MS.gene053494 | MS.gene63507 | 0.812284 | 4.58E-51 | -1.69E-46 |
| MS.gene053555 | MS.gene63507 | 0.807615 | 4.63E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene63507 | 0.803816 | 2.91E-49 | -1.69E-46 |
| MS.gene053559 | MS.gene63507 | 0.818456 | 1.94E-52 | -1.69E-46 |
| MS.gene053577 | MS.gene63507 | 0.818422 | 1.98E-52 | -1.69E-46 |
| MS.gene053584 | MS.gene63507 | 0.828705 | 7.75E-55 | -1.69E-46 |
| MS.gene053811 | MS.gene63507 | 0.801593 | 8.37E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene63507 | 0.939224 | 1.82E-99 | -1.69E-46 |
| MS.gene053907 | MS.gene63507 | 0.811085 | 8.35E-51 | -1.69E-46 |
| MS.gene053928 | MS.gene63507 | 0.821269 | 4.42E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene63507 | 0.814917 | 1.21E-51 | -1.69E-46 |
| MS.gene054123 | MS.gene63507 | 0.821987 | 3.01E-53 | -1.69E-46 |
| MS.gene054183 | MS.gene63507 | 0.859659 | 3.55E-63 | -1.69E-46 |
| MS.gene054349 | MS.gene63507 | 0.823758 | 1.17E-53 | -1.69E-46 |
| MS.gene054379 | MS.gene63507 | 0.807547 | 4.79E-50 | -1.69E-46 |
| MS.gene054405 | MS.gene63507 | 0.80508 | 1.59E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene63507 | 0.821925 | 3.11E-53 | -1.69E-46 |
| MS.gene054473 | MS.gene63507 | 0.889503 | 2.28E-73 | -1.69E-46 |
| MS.gene054542 | MS.gene63507 | 0.825363 | 4.88E-54 | -1.69E-46 |
| MS.gene054559 | MS.gene63507 | 0.803053 | 4.19E-49 | -1.69E-46 |
| MS.gene05455 | MS.gene63507 | 0.822088 | 2.86E-53 | -1.69E-46 |
| MS.gene054719 | MS.gene63507 | 0.826068 | 3.32E-54 | -1.69E-46 |
| MS.gene054826 | MS.gene63507 | 0.802784 | 4.76E-49 | -1.69E-46 |
| MS.gene054918 | MS.gene63507 | 0.817744 | 2.81E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene63507 | 0.918182 | 2.14E-86 | -1.69E-46 |
| MS.gene054942 | MS.gene63507 | 0.867944 | 9.42E-66 | -1.69E-46 |
| MS.gene054983 | MS.gene63507 | 0.880676 | 4.51E-70 | -1.69E-46 |
| MS.gene05510 | MS.gene63507 | 0.803122 | 4.05E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene63507 | 0.825681 | 4.11E-54 | -1.69E-46 |
| MS.gene055277 | MS.gene63507 | 0.827617 | 1.42E-54 | -1.69E-46 |
| MS.gene055356 | MS.gene63507 | 0.823666 | 1.22E-53 | -1.69E-46 |
| MS.gene055358 | MS.gene63507 | 0.834036 | 3.78E-56 | -1.69E-46 |
| MS.gene055367 | MS.gene63507 | 0.831314 | 1.79E-55 | -1.69E-46 |
| MS.gene055390 | MS.gene63507 | 0.841509 | 4.55E-58 | -1.69E-46 |
| MS.gene055422 | MS.gene63507 | 0.867333 | 1.48E-65 | -1.69E-46 |
| MS.gene055428 | MS.gene63507 | 0.86566 | 5.03E-65 | -1.69E-46 |
| MS.gene05553 | MS.gene63507 | 0.867669 | 1.15E-65 | -1.69E-46 |
| MS.gene055604 | MS.gene63507 | 0.845303 | 4.42E-59 | -1.69E-46 |
| MS.gene055701 | MS.gene63507 | 0.825667 | 4.14E-54 | -1.69E-46 |
| MS.gene055712 | MS.gene63507 | 0.831617 | 1.51E-55 | -1.69E-46 |
| MS.gene055859 | MS.gene63507 | 0.843557 | 1.30E-58 | -1.69E-46 |
| MS.gene05595 | MS.gene63507 | 0.807386 | 5.18E-50 | -1.69E-46 |
| MS.gene056069 | MS.gene63507 | -0.801634 | 8.21E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene63507 | 0.849541 | 3.03E-60 | -1.69E-46 |
| MS.gene056506 | MS.gene63507 | 0.800948 | 1.13E-48 | -1.69E-46 |
| MS.gene056612 | MS.gene63507 | 0.838013 | 3.70E-57 | -1.69E-46 |
| MS.gene056659 | MS.gene63507 | 0.8159 | 7.30E-52 | -1.69E-46 |
| MS.gene056723 | MS.gene63507 | 0.876003 | 1.97E-68 | -1.69E-46 |
| MS.gene056875 | MS.gene63507 | 0.856456 | 3.18E-62 | -1.69E-46 |
| MS.gene056899 | MS.gene63507 | -0.81613 | 6.48E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene63507 | 0.868041 | 8.77E-66 | -1.69E-46 |
| MS.gene05702 | MS.gene63507 | 0.837415 | 5.27E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene63507 | 0.899981 | 1.16E-77 | -1.69E-46 |
| MS.gene057200 | MS.gene63507 | 0.806203 | 9.22E-50 | -1.69E-46 |
| MS.gene057244 | MS.gene63507 | -0.80983 | 1.56E-50 | -1.69E-46 |
| MS.gene057245 | MS.gene63507 | 0.859674 | 3.51E-63 | -1.69E-46 |
| MS.gene057260 | MS.gene63507 | 0.80707 | 6.05E-50 | -1.69E-46 |
| MS.gene057439 | MS.gene63507 | 0.830348 | 3.09E-55 | -1.69E-46 |
| MS.gene057448 | MS.gene63507 | 0.85618 | 3.83E-62 | -1.69E-46 |
| MS.gene057449 | MS.gene63507 | 0.820332 | 7.26E-53 | -1.69E-46 |
| MS.gene057450 | MS.gene63507 | 0.853016 | 3.16E-61 | -1.69E-46 |
| MS.gene057469 | MS.gene63507 | 0.890414 | 1.01E-73 | -1.69E-46 |
| MS.gene057476 | MS.gene63507 | 0.805993 | 1.02E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene63507 | 0.825489 | 4.56E-54 | -1.69E-46 |
| MS.gene057639 | MS.gene63507 | 0.82442 | 8.15E-54 | -1.69E-46 |
| MS.gene057749 | MS.gene63507 | 0.805945 | 1.04E-49 | -1.69E-46 |
| MS.gene057750 | MS.gene63507 | 0.853111 | 2.96E-61 | -1.69E-46 |
| MS.gene057754 | MS.gene63507 | 0.802562 | 5.29E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene63507 | 0.804978 | 1.67E-49 | -1.69E-46 |
| MS.gene057929 | MS.gene63507 | 0.800735 | 1.25E-48 | -1.69E-46 |
| MS.gene057967 | MS.gene63507 | 0.823247 | 1.54E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene63507 | 0.902203 | 1.23E-78 | -1.69E-46 |
| MS.gene05811 | MS.gene63507 | 0.883194 | 5.51E-71 | -1.69E-46 |
| MS.gene058139 | MS.gene63507 | 0.82102 | 5.04E-53 | -1.69E-46 |
| MS.gene058142 | MS.gene63507 | 0.878937 | 1.87E-69 | -1.69E-46 |
| MS.gene058220 | MS.gene63507 | 0.801312 | 9.56E-49 | -1.69E-46 |
| MS.gene058233 | MS.gene63507 | 0.802383 | 5.76E-49 | -1.69E-46 |
| MS.gene058276 | MS.gene63507 | 0.808571 | 2.90E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene63507 | 0.820506 | 6.62E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene63507 | 0.866538 | 2.65E-65 | -1.69E-46 |
| MS.gene058736 | MS.gene63507 | 0.833002 | 6.85E-56 | -1.69E-46 |
| MS.gene058739 | MS.gene63507 | 0.83953 | 1.50E-57 | -1.69E-46 |
| MS.gene058749 | MS.gene63507 | 0.850319 | 1.83E-60 | -1.69E-46 |
| MS.gene058833 | MS.gene63507 | 0.828871 | 7.07E-55 | -1.69E-46 |
| MS.gene058845 | MS.gene63507 | 0.83851 | 2.76E-57 | -1.69E-46 |
| MS.gene05886 | MS.gene63507 | 0.857635 | 1.43E-62 | -1.69E-46 |
| MS.gene058949 | MS.gene63507 | 0.824531 | 7.67E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene63507 | 0.887959 | 9.02E-73 | -1.69E-46 |
| MS.gene059124 | MS.gene63507 | 0.830673 | 2.57E-55 | -1.69E-46 |
| MS.gene059128 | MS.gene63507 | 0.842082 | 3.21E-58 | -1.69E-46 |
| MS.gene059247 | MS.gene63507 | 0.828457 | 8.90E-55 | -1.69E-46 |
| MS.gene059285 | MS.gene63507 | 0.851165 | 1.06E-60 | -1.69E-46 |
| MS.gene059420 | MS.gene63507 | 0.852815 | 3.60E-61 | -1.69E-46 |
| MS.gene059462 | MS.gene63507 | 0.829472 | 5.05E-55 | -1.69E-46 |
| MS.gene059518 | MS.gene63507 | 0.820493 | 6.66E-53 | -1.69E-46 |
| MS.gene059597 | MS.gene63507 | 0.85277 | 3.71E-61 | -1.69E-46 |
| MS.gene059609 | MS.gene63507 | 0.801261 | 9.79E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene63507 | 0.810233 | 1.28E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene63507 | 0.840209 | 9.98E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene63507 | 0.835625 | 1.50E-56 | -1.69E-46 |
| MS.gene059695 | MS.gene63507 | 0.836962 | 6.88E-57 | -1.69E-46 |
| MS.gene05984 | MS.gene63507 | 0.877206 | 7.57E-69 | -1.69E-46 |
| MS.gene059894 | MS.gene63507 | 0.838093 | 3.53E-57 | -1.69E-46 |
| MS.gene059899 | MS.gene63507 | 0.850782 | 1.36E-60 | -1.69E-46 |
| MS.gene060107 | MS.gene63507 | 0.804163 | 2.46E-49 | -1.69E-46 |
| MS.gene060137 | MS.gene63507 | -0.827465 | 1.54E-54 | -1.69E-46 |
| MS.gene060314 | MS.gene63507 | 0.825323 | 4.99E-54 | -1.69E-46 |
| MS.gene06037 | MS.gene63507 | 0.820871 | 5.45E-53 | -1.69E-46 |
| MS.gene060403 | MS.gene63507 | 0.803801 | 2.93E-49 | -1.69E-46 |
| MS.gene060407 | MS.gene63507 | 0.80521 | 1.49E-49 | -1.69E-46 |
| MS.gene060480 | MS.gene63507 | 0.819176 | 1.33E-52 | -1.69E-46 |
| MS.gene060495 | MS.gene63507 | 0.811713 | 6.10E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene63507 | 0.813957 | 1.97E-51 | -1.69E-46 |
| MS.gene060685 | MS.gene63507 | 0.80146 | 8.91E-49 | -1.69E-46 |
| MS.gene060994 | MS.gene63507 | 0.801765 | 7.72E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene63507 | 0.80606 | 9.88E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene63507 | -0.820422 | 6.92E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene63507 | 0.878574 | 2.52E-69 | -1.69E-46 |
| MS.gene061051 | MS.gene63507 | -0.801178 | 1.02E-48 | -1.69E-46 |
| MS.gene061071 | MS.gene63507 | 0.81157 | 6.55E-51 | -1.69E-46 |
| MS.gene061085 | MS.gene63507 | 0.81917 | 1.34E-52 | -1.69E-46 |
| MS.gene061114 | MS.gene63507 | -0.870009 | 2.02E-66 | -1.69E-46 |
| MS.gene061159 | MS.gene63507 | 0.82254 | 2.24E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63507.t1 | MTR_3g069160 | 98.311 | 533 | 9 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1095 |
| MS.gene63507.t1 | MTR_3g069180 | 98.117 | 531 | 10 | 0 | 1 | 531 | 51 | 581 | 0.0 | 1089 |
| MS.gene63507.t1 | MTR_3g069160 | 95.273 | 550 | 9 | 1 | 1 | 533 | 51 | 600 | 0.0 | 1085 |
| MS.gene63507.t1 | MTR_5g081250 | 76.895 | 541 | 114 | 6 | 3 | 533 | 4 | 543 | 0.0 | 845 |
| MS.gene63507.t1 | MTR_3g069160 | 98.741 | 397 | 5 | 0 | 137 | 533 | 1 | 397 | 0.0 | 815 |
| MS.gene63507.t1 | MTR_5g081250 | 76.482 | 523 | 112 | 6 | 3 | 515 | 4 | 525 | 0.0 | 813 |
| MS.gene63507.t1 | MTR_1g051385 | 51.590 | 566 | 235 | 11 | 6 | 533 | 56 | 620 | 0.0 | 538 |
| MS.gene63507.t1 | MTR_1g051385 | 52.591 | 521 | 211 | 10 | 48 | 533 | 4 | 523 | 9.56e-180 | 516 |
| MS.gene63507.t1 | MTR_1g028510 | 29.363 | 361 | 197 | 10 | 58 | 375 | 84 | 429 | 3.54e-33 | 133 |
| MS.gene63507.t1 | MTR_1g028510 | 30.503 | 318 | 166 | 9 | 58 | 335 | 84 | 386 | 4.41e-30 | 122 |
| MS.gene63507.t1 | MTR_7g100940 | 26.978 | 278 | 149 | 8 | 81 | 319 | 103 | 365 | 5.15e-20 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63507.t1 | AT5G05980 | 62.107 | 541 | 166 | 8 | 2 | 533 | 3 | 513 | 0.0 | 671 |
| MS.gene63507.t1 | AT5G05980 | 62.107 | 541 | 166 | 8 | 2 | 533 | 61 | 571 | 0.0 | 669 |
| MS.gene63507.t1 | AT3G55630 | 58.427 | 534 | 179 | 10 | 1 | 533 | 1 | 492 | 0.0 | 606 |
| MS.gene63507.t1 | AT3G55630 | 58.240 | 534 | 179 | 11 | 1 | 533 | 1 | 491 | 0.0 | 600 |
| MS.gene63507.t1 | AT3G55630 | 55.431 | 534 | 173 | 11 | 1 | 533 | 1 | 470 | 0.0 | 558 |
| MS.gene63507.t1 | AT3G55630 | 59.158 | 475 | 153 | 9 | 60 | 533 | 1 | 435 | 0.0 | 553 |
| MS.gene63507.t1 | AT3G55630 | 59.158 | 475 | 153 | 9 | 60 | 533 | 1 | 435 | 0.0 | 553 |
| MS.gene63507.t1 | AT3G55630 | 59.158 | 475 | 153 | 9 | 60 | 533 | 1 | 435 | 0.0 | 553 |
| MS.gene63507.t1 | AT3G10160 | 51.601 | 562 | 236 | 10 | 2 | 533 | 70 | 625 | 0.0 | 551 |
| MS.gene63507.t1 | AT3G55630 | 56.030 | 398 | 134 | 9 | 137 | 533 | 1 | 358 | 5.93e-147 | 426 |
| MS.gene63507.t1 | AT5G41480 | 38.095 | 168 | 102 | 1 | 50 | 215 | 84 | 251 | 6.28e-31 | 126 |
Find 113 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTAAATGGTTTAAAATT+AGG | 0.057059 | 3.1:-56622233 | MS.gene63507:CDS |
| GCACATGCTTCCATGCTTTC+AGG | 0.165417 | 3.1:+56621863 | None:intergenic |
| TCTTCATATGGCGATGATTT+TGG | 0.165761 | 3.1:+56628122 | None:intergenic |
| CGTCTTATTCGAGTACTTAA+AGG | 0.175088 | 3.1:-56628024 | MS.gene63507:intron |
| TACTAAATGGTTTAAAATTA+GGG | 0.198474 | 3.1:-56622232 | MS.gene63507:CDS |
| AAACCAGTCAACTCGCTTTC+AGG | 0.213072 | 3.1:-56619897 | MS.gene63507:intron |
| CGAGAAAGATTTCGTTTAGA+TGG | 0.260770 | 3.1:-56627200 | MS.gene63507:CDS |
| ACTGGTTCCATACATCTTAT+TGG | 0.265122 | 3.1:-56619606 | MS.gene63507:CDS |
| TTAGATGCCAAATTACTAAA+TGG | 0.272407 | 3.1:-56622245 | MS.gene63507:CDS |
| TATTGGTGATGTGTTGAAAT+TGG | 0.304394 | 3.1:-56619589 | MS.gene63507:CDS |
| ATGCATCAGGTCCTTGTAAC+TGG | 0.311721 | 3.1:-56619624 | MS.gene63507:intron |
| TGAGAAGGCGGGAATCTTAA+AGG | 0.312541 | 3.1:-56623982 | MS.gene63507:intron |
| AGTTCACTCTACAAAGAGTA+TGG | 0.322540 | 3.1:-56620225 | MS.gene63507:CDS |
| TCTACATGGATGAATATAAA+TGG | 0.327429 | 3.1:-56622158 | MS.gene63507:CDS |
| CACCACTTTATTTGAGAACT+TGG | 0.339731 | 3.1:+56621775 | None:intergenic |
| CATTGCCACTGGTTATCAAT+TGG | 0.345970 | 3.1:-56619940 | MS.gene63507:CDS |
| GCTTCCAATGCTTCTTCATA+TGG | 0.369429 | 3.1:+56628110 | None:intergenic |
| TAAAGCAAGGAAGTGGAAAA+AGG | 0.369880 | 3.1:+56624847 | None:intergenic |
| TATGACCACATGGAAATTCT+TGG | 0.370689 | 3.1:-56624464 | MS.gene63507:intron |
| TGCATAATGGAGGTTGGGTT+AGG | 0.370944 | 3.1:-56624681 | MS.gene63507:CDS |
| CACTGGTTATCAATTGGCTT+AGG | 0.371537 | 3.1:-56619934 | MS.gene63507:CDS |
| ATATTTACAGAAGGAGATAA+TGG | 0.371821 | 3.1:-56628149 | MS.gene63507:intron |
| TTGAAGATTATCCATGTTGC+TGG | 0.377902 | 3.1:-56627730 | MS.gene63507:CDS |
| GATGTTTGCATAATGGAGGT+TGG | 0.388180 | 3.1:-56624687 | MS.gene63507:CDS |
| TTATCAATGTACCACAAGAT+TGG | 0.388558 | 3.1:-56620295 | MS.gene63507:CDS |
| GAAGTTATACCACACACAAT+AGG | 0.399740 | 3.1:+56624494 | None:intergenic |
| AGTACATCCATTGCTTCATC+AGG | 0.408417 | 3.1:+56623085 | None:intergenic |
| CTCTTCTGAAAATATCTTGA+AGG | 0.417583 | 3.1:+56624820 | None:intergenic |
| TCGTGTTGGTGATGTCAATA+TGG | 0.419030 | 3.1:-56628060 | MS.gene63507:CDS |
| GTGTGTGGTATAACTTCTCT+TGG | 0.421453 | 3.1:-56624488 | MS.gene63507:CDS |
| ACAGGTGGATGTTTGCATAA+TGG | 0.421945 | 3.1:-56624694 | MS.gene63507:intron |
| TATTTACAGAAGGAGATAAT+GGG | 0.426485 | 3.1:-56628148 | MS.gene63507:intron |
| GGTTTAAAATTAGGGCTTGA+AGG | 0.427252 | 3.1:-56622224 | MS.gene63507:CDS |
| GATGAAACAAGGTCTGGTTC+TGG | 0.433364 | 3.1:+56621813 | None:intergenic |
| CACATCACCAATAAGATGTA+TGG | 0.435776 | 3.1:+56619599 | None:intergenic |
| CAAGACCAGCATTAACATAT+TGG | 0.438258 | 3.1:+56622195 | None:intergenic |
| CTGTTGCATTATGCTCTACA+TGG | 0.446804 | 3.1:-56622172 | MS.gene63507:CDS |
| TTGCCAGAGCAGTTCATAAA+CGG | 0.451738 | 3.1:-56621992 | MS.gene63507:CDS |
| GGTTCTGGTCTTTGATTGCA+AGG | 0.458482 | 3.1:+56621828 | None:intergenic |
| ACTGGTTATCAATTGGCTTA+GGG | 0.461528 | 3.1:-56619933 | MS.gene63507:CDS |
| TTCTGAAGAATTAGCTGGTA+TGG | 0.465934 | 3.1:-56620005 | MS.gene63507:CDS |
| AAGAAGGCGCTATTTGTGCC+TGG | 0.475535 | 3.1:-56620319 | MS.gene63507:CDS |
| AATACTCTTGGAGAAATTGC+TGG | 0.484435 | 3.1:-56624005 | MS.gene63507:CDS |
| ATGTTTGCATAATGGAGGTT+GGG | 0.485602 | 3.1:-56624686 | MS.gene63507:CDS |
| GAGAAAGATTTCGTTTAGAT+GGG | 0.487035 | 3.1:-56627199 | MS.gene63507:intron |
| CAACTGCAAGTCTGCAAGGA+AGG | 0.487658 | 3.1:-56621964 | MS.gene63507:CDS |
| ATATTAACAGGGAATACTCT+TGG | 0.488965 | 3.1:-56624017 | MS.gene63507:intron |
| GATTTGGTAGATGCTTGAAT+TGG | 0.490018 | 3.1:-56627770 | MS.gene63507:intron |
| CTATCTGATGAAACAAGGTC+TGG | 0.499454 | 3.1:+56621807 | None:intergenic |
| ATGAAAACTTGTGCTGATCA+TGG | 0.502432 | 3.1:-56621284 | MS.gene63507:intron |
| TGTGTGGTATAACTTCTCTT+GGG | 0.503285 | 3.1:-56624487 | MS.gene63507:CDS |
| AAACCGTTTATGAACTGCTC+TGG | 0.505379 | 3.1:+56621989 | None:intergenic |
| TTCCAAGTTCTCAAATAAAG+TGG | 0.507300 | 3.1:-56621777 | MS.gene63507:CDS |
| TTTAGTAATTTGGCATCTAA+CGG | 0.512015 | 3.1:+56622248 | None:intergenic |
| GGTTGAGTCACTGTAAATGC+TGG | 0.513165 | 3.1:+56623106 | None:intergenic |
| TTACCTGAAAGCGAGTTGAC+TGG | 0.526726 | 3.1:+56619894 | None:intergenic |
| TTAGATGAGGAGAAGTGAAA+AGG | 0.531483 | 3.1:+56627231 | None:intergenic |
| ATCCATGTTGCTGGTACCAA+GGG | 0.532374 | 3.1:-56627721 | MS.gene63507:CDS |
| ATCGCCATATGAAGAAGCAT+TGG | 0.533099 | 3.1:-56628114 | MS.gene63507:CDS |
| GAAATTGCTGGTGAGAAGGC+GGG | 0.535726 | 3.1:-56623993 | MS.gene63507:CDS |
| TAATAAAAGTACCTTCCCCT+TGG | 0.537324 | 3.1:+56627705 | None:intergenic |
| TATCCATGTTGCTGGTACCA+AGG | 0.538132 | 3.1:-56627722 | MS.gene63507:CDS |
| AACGGAGATGTTACTTGAAG+AGG | 0.538384 | 3.1:+56622266 | None:intergenic |
| GTAGATGCTTGAATTGGAAG+AGG | 0.539812 | 3.1:-56627764 | MS.gene63507:intron |
| GTAGAGTGAACTGCCATGAC+AGG | 0.542280 | 3.1:+56620236 | None:intergenic |
| ATTACTAAACGCACTCGTGT+TGG | 0.548955 | 3.1:-56628074 | MS.gene63507:CDS |
| AACTGCAAGTCTGCAAGGAA+GGG | 0.551072 | 3.1:-56621963 | MS.gene63507:CDS |
| TGGAGAAATTGCTGGTGAGA+AGG | 0.551632 | 3.1:-56623997 | MS.gene63507:CDS |
| GGCTCATAGTCCTGAAAGCA+TGG | 0.554574 | 3.1:-56621873 | MS.gene63507:CDS |
| AAATTGAATACCTTGAGCCA+TGG | 0.556713 | 3.1:+56628271 | None:intergenic |
| GCAGCTTCTGAAGAATTAGC+TGG | 0.558289 | 3.1:-56620010 | MS.gene63507:CDS |
| GAGCACCAATATGTTAATGC+TGG | 0.560675 | 3.1:-56622200 | MS.gene63507:CDS |
| AATGGATGTACTTAAAGAGA+AGG | 0.562231 | 3.1:-56623074 | MS.gene63507:CDS |
| TCAAATGAGACTCTTCAAGA+TGG | 0.563572 | 3.1:+56622135 | None:intergenic |
| GTATGGGAAAATCTCATGCA+AGG | 0.565634 | 3.1:-56620208 | MS.gene63507:CDS |
| GATGTATGGAACCAGTTACA+AGG | 0.566973 | 3.1:+56619613 | None:intergenic |
| ATAATGGAGGTTGGGTTAGG+TGG | 0.568173 | 3.1:-56624678 | MS.gene63507:CDS |
| ATTCTAACATTGACCTGTCA+TGG | 0.572664 | 3.1:-56620249 | MS.gene63507:CDS |
| GTGGTGTTATGATAGACTAA+AGG | 0.574335 | 3.1:-56625662 | MS.gene63507:intron |
| AGGCGAGTAAAGCAAGGAAG+TGG | 0.579947 | 3.1:+56624840 | None:intergenic |
| TTAACAACTGCAAGTCTGCA+AGG | 0.586475 | 3.1:-56621968 | MS.gene63507:CDS |
| TCCAAATTAACCATGGCTCA+AGG | 0.586683 | 3.1:-56628281 | None:intergenic |
| GACTCAACCTGATGAAGCAA+TGG | 0.590492 | 3.1:-56623092 | MS.gene63507:CDS |
| GTTCACTCTACAAAGAGTAT+GGG | 0.590549 | 3.1:-56620224 | MS.gene63507:CDS |
| TTCTCTTGGGTATGACCACA+TGG | 0.591494 | 3.1:-56624474 | MS.gene63507:CDS |
| GTTCTGGTCTTTGATTGCAA+GGG | 0.592376 | 3.1:+56621829 | None:intergenic |
| AATCTCATGCAAGGGAACAA+AGG | 0.592939 | 3.1:-56620199 | MS.gene63507:intron |
| TCCCCTTGGTACCAGCAACA+TGG | 0.595341 | 3.1:+56627719 | None:intergenic |
| CAAATACGATGCAACAAATG+TGG | 0.602729 | 3.1:-56624655 | MS.gene63507:intron |
| AGAAATTGCTGGTGAGAAGG+CGG | 0.607678 | 3.1:-56623994 | MS.gene63507:CDS |
| TGCAGGTGTCTACTTCAAGA+AGG | 0.608904 | 3.1:-56620335 | MS.gene63507:intron |
| TCTTGAAGGCGAGTAAAGCA+AGG | 0.618991 | 3.1:+56624834 | None:intergenic |
| TCTCGTATATCAATTAGATG+AGG | 0.624514 | 3.1:+56627218 | None:intergenic |
| TATGGGAAAATCTCATGCAA+GGG | 0.625677 | 3.1:-56620207 | MS.gene63507:CDS |
| ATCAGCTATCTGATGAAACA+AGG | 0.631446 | 3.1:+56621802 | None:intergenic |
| TGTTGCTGGTACCAAGGGGA+AGG | 0.637131 | 3.1:-56627716 | MS.gene63507:intron |
| ATTGATAACCAGTGGCAATG+AGG | 0.637607 | 3.1:+56619943 | None:intergenic |
| GCATGGAAGCATGTGCGAAG+TGG | 0.640363 | 3.1:-56621856 | MS.gene63507:CDS |
| AGGTCAATGTTAGAATCACT+TGG | 0.645779 | 3.1:+56620256 | None:intergenic |
| TTTAGTAATCAAAGATGACA+AGG | 0.654793 | 3.1:+56628088 | None:intergenic |
| AAGCATGAGATCCAATCTTG+TGG | 0.655306 | 3.1:+56620284 | None:intergenic |
| GAATCTATATTACGCAACTG+TGG | 0.657927 | 3.1:-56627266 | MS.gene63507:CDS |
| GCGTAATATAGATTCTGCGA+AGG | 0.659957 | 3.1:+56627274 | None:intergenic |
| CTAAGCCAATTGATAACCAG+TGG | 0.666215 | 3.1:+56619935 | None:intergenic |
| TTGTGGTACATTGATAAACC+AGG | 0.673003 | 3.1:+56620301 | None:intergenic |
| AAAGTGGTGAAGACGCACCA+AGG | 0.676464 | 3.1:-56621761 | MS.gene63507:CDS |
| GGTGGATGTTTGCATAATGG+AGG | 0.684054 | 3.1:-56624691 | MS.gene63507:CDS |
| AAGTGAGGAAGAAGTAACTG+AGG | 0.686138 | 3.1:+56621308 | None:intergenic |
| TCCATGTTGCTGGTACCAAG+GGG | 0.704783 | 3.1:-56627720 | MS.gene63507:CDS |
| TGTTGGTGATGTCAATATGG+AGG | 0.724403 | 3.1:-56628057 | MS.gene63507:CDS |
| TTAAGTACTCGAATAAGACG+AGG | 0.728653 | 3.1:+56628027 | None:intergenic |
| GTGCAGAAACCTATTGTGTG+TGG | 0.729317 | 3.1:-56624503 | MS.gene63507:CDS |
| ACTAACCAAGAATTTCCATG+TGG | 0.790649 | 3.1:+56624459 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 56619578 | 56628291 | 56619578 | ID=MS.gene63507 |
| chr3.1 | mRNA | 56619578 | 56628291 | 56619578 | ID=MS.gene63507.t1;Parent=MS.gene63507 |
| chr3.1 | exon | 56628282 | 56628291 | 56628282 | ID=MS.gene63507.t1.exon1;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56628282 | 56628291 | 56628282 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56628025 | 56628161 | 56628025 | ID=MS.gene63507.t1.exon2;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56628025 | 56628161 | 56628025 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56627717 | 56627782 | 56627717 | ID=MS.gene63507.t1.exon3;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56627717 | 56627782 | 56627717 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56627200 | 56627309 | 56627200 | ID=MS.gene63507.t1.exon4;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56627200 | 56627309 | 56627200 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56625663 | 56625723 | 56625663 | ID=MS.gene63507.t1.exon5;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56625663 | 56625723 | 56625663 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56624817 | 56624900 | 56624817 | ID=MS.gene63507.t1.exon6;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56624817 | 56624900 | 56624817 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56624656 | 56624712 | 56624656 | ID=MS.gene63507.t1.exon7;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56624656 | 56624712 | 56624656 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56624465 | 56624525 | 56624465 | ID=MS.gene63507.t1.exon8;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56624465 | 56624525 | 56624465 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56623983 | 56624029 | 56623983 | ID=MS.gene63507.t1.exon9;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56623983 | 56624029 | 56623983 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56623060 | 56623137 | 56623060 | ID=MS.gene63507.t1.exon10;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56623060 | 56623137 | 56623060 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56622127 | 56622291 | 56622127 | ID=MS.gene63507.t1.exon11;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56622127 | 56622291 | 56622127 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56621739 | 56622023 | 56621739 | ID=MS.gene63507.t1.exon12;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56621739 | 56622023 | 56621739 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56621285 | 56621363 | 56621285 | ID=MS.gene63507.t1.exon13;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56621285 | 56621363 | 56621285 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56620200 | 56620352 | 56620200 | ID=MS.gene63507.t1.exon14;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56620200 | 56620352 | 56620200 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56619898 | 56620046 | 56619898 | ID=MS.gene63507.t1.exon15;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56619898 | 56620046 | 56619898 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| chr3.1 | exon | 56619578 | 56619637 | 56619578 | ID=MS.gene63507.t1.exon16;Parent=MS.gene63507.t1 |
| chr3.1 | CDS | 56619578 | 56619637 | 56619578 | ID=cds.MS.gene63507.t1;Parent=MS.gene63507.t1 |
| Gene Sequence |
| Protein sequence |
