Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063750.t1 | XP_003609926.2 | 99.5 | 197 | 1 | 0 | 1 | 197 | 138 | 334 | 2.00E-110 | 408.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063750.t1 | G7JR56 | 99.5 | 197 | 1 | 0 | 1 | 197 | 138 | 334 | 1.5e-110 | 408.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene063750 | 0.813638 | 2.31E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene063750 | 0.873631 | 1.27E-67 | -1.69E-46 |
| MS.gene049669 | MS.gene063750 | 0.846751 | 1.78E-59 | -1.69E-46 |
| MS.gene050105 | MS.gene063750 | 0.809187 | 2.14E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene063750 | 0.809609 | 1.74E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene063750 | 0.838147 | 3.42E-57 | -1.69E-46 |
| MS.gene050228 | MS.gene063750 | 0.833972 | 3.92E-56 | -1.69E-46 |
| MS.gene050303 | MS.gene063750 | 0.812138 | 4.93E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene063750 | 0.809068 | 2.27E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene063750 | -0.818136 | 2.29E-52 | -1.69E-46 |
| MS.gene050642 | MS.gene063750 | 0.814261 | 1.69E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene063750 | 0.80039 | 1.47E-48 | -1.69E-46 |
| MS.gene050724 | MS.gene063750 | 0.801065 | 1.07E-48 | -1.69E-46 |
| MS.gene050750 | MS.gene063750 | 0.823366 | 1.44E-53 | -1.69E-46 |
| MS.gene050953 | MS.gene063750 | 0.822252 | 2.62E-53 | -1.69E-46 |
| MS.gene051064 | MS.gene063750 | 0.842294 | 2.82E-58 | -1.69E-46 |
| MS.gene051935 | MS.gene063750 | 0.818974 | 1.48E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene063750 | 0.816396 | 5.65E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene063750 | 0.857497 | 1.57E-62 | -1.69E-46 |
| MS.gene052333 | MS.gene063750 | 0.837932 | 3.88E-57 | -1.69E-46 |
| MS.gene052376 | MS.gene063750 | 0.803718 | 3.05E-49 | -1.69E-46 |
| MS.gene052389 | MS.gene063750 | 0.874737 | 5.35E-68 | -1.69E-46 |
| MS.gene052586 | MS.gene063750 | 0.839796 | 1.28E-57 | -1.69E-46 |
| MS.gene053166 | MS.gene063750 | 0.828577 | 8.32E-55 | -1.69E-46 |
| MS.gene054291 | MS.gene063750 | -0.81836 | 2.04E-52 | -1.69E-46 |
| MS.gene054405 | MS.gene063750 | 0.812207 | 4.76E-51 | -1.69E-46 |
| MS.gene054468 | MS.gene063750 | 0.86779 | 1.06E-65 | -1.69E-46 |
| MS.gene054479 | MS.gene063750 | 0.805013 | 1.64E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene063750 | 0.867854 | 1.01E-65 | -1.69E-46 |
| MS.gene055818 | MS.gene063750 | 0.804521 | 2.08E-49 | -1.69E-46 |
| MS.gene05604 | MS.gene063750 | 0.81889 | 1.55E-52 | -1.69E-46 |
| MS.gene056087 | MS.gene063750 | 0.81189 | 5.58E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene063750 | 0.844159 | 8.99E-59 | -1.69E-46 |
| MS.gene056779 | MS.gene063750 | 0.805278 | 1.44E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene063750 | 0.805148 | 1.54E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene063750 | 0.892423 | 1.61E-74 | -1.69E-46 |
| MS.gene057156 | MS.gene063750 | -0.810416 | 1.17E-50 | -1.69E-46 |
| MS.gene058139 | MS.gene063750 | 0.802386 | 5.75E-49 | -1.69E-46 |
| MS.gene058498 | MS.gene063750 | 0.837506 | 4.99E-57 | -1.69E-46 |
| MS.gene058500 | MS.gene063750 | 0.833443 | 5.32E-56 | -1.69E-46 |
| MS.gene058502 | MS.gene063750 | 0.815874 | 7.39E-52 | -1.69E-46 |
| MS.gene059952 | MS.gene063750 | 0.802479 | 5.50E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene063750 | 0.80761 | 4.65E-50 | -1.69E-46 |
| MS.gene060572 | MS.gene063750 | 0.8457 | 3.45E-59 | -1.69E-46 |
| MS.gene060879 | MS.gene063750 | 0.885886 | 5.52E-72 | -1.69E-46 |
| MS.gene061040 | MS.gene063750 | -0.850985 | 1.19E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 38 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGTGTACGAGTTCTTTA+AGG | 0.194014 | 8.2:-8918020 | MS.gene063750:intron |
| CACCTACAAATCTCTGATTT+TGG | 0.208922 | 8.2:+8916624 | None:intergenic |
| CTCATCAACCAACTCATTCT+TGG | 0.309879 | 8.2:+8916290 | None:intergenic |
| GTCTCGGCAGAATGTAATTA+AGG | 0.345693 | 8.2:-8916739 | MS.gene063750:CDS |
| TGAATCGCCGTCTGAGCACC+TGG | 0.365340 | 8.2:+8916884 | None:intergenic |
| AAGACACCGTATTTCAAGTC+AGG | 0.400340 | 8.2:-8916920 | MS.gene063750:CDS |
| GACCAAAATCAGAGATTTGT+AGG | 0.415035 | 8.2:-8916626 | MS.gene063750:intron |
| ATATCCCATCAAGTGCAAAA+TGG | 0.416702 | 8.2:+8916652 | None:intergenic |
| TTCTGTCCAGTTCTTAACTT+TGG | 0.420976 | 8.2:+8916254 | None:intergenic |
| TGGTGACCAAAGTTAAGAAC+TGG | 0.453694 | 8.2:-8916260 | MS.gene063750:CDS |
| ATTATGAAAACTCATATCCT+TGG | 0.454107 | 8.2:-8916314 | MS.gene063750:CDS |
| TGAATCTCATGGAAAAGTCC+TGG | 0.458226 | 8.2:+8916684 | None:intergenic |
| GCAATAGAGTGTGCTGAAGT+TGG | 0.485346 | 8.2:-8916357 | MS.gene063750:CDS |
| GCCGTCTGAGCACCTGGGAG+AGG | 0.498666 | 8.2:+8916890 | None:intergenic |
| TTCTTAACTTTGGTCACCAA+AGG | 0.502489 | 8.2:+8916264 | None:intergenic |
| TTAAGGATCACACTATTGAA+TGG | 0.508954 | 8.2:-8916722 | MS.gene063750:CDS |
| GTTGGTTGATGAGCACCCTT+TGG | 0.511476 | 8.2:-8916280 | MS.gene063750:CDS |
| CCCTCTCCCAGGTGCTCAGA+CGG | 0.520221 | 8.2:-8916891 | MS.gene063750:CDS |
| CCGTCTGAGCACCTGGGAGA+GGG | 0.523562 | 8.2:+8916891 | None:intergenic |
| TAACAGGACTTTAAATGCCA+AGG | 0.528929 | 8.2:-8916406 | MS.gene063750:intron |
| ACCAAAATCATACGTTACAA+TGG | 0.539123 | 8.2:+8916835 | None:intergenic |
| TCTTAACTTTGGTCACCAAA+GGG | 0.540216 | 8.2:+8916265 | None:intergenic |
| ATTATCATCAATAAGAACCT+TGG | 0.545700 | 8.2:+8916389 | None:intergenic |
| TGAATCCCTGACTTGAAATA+CGG | 0.546358 | 8.2:+8916914 | None:intergenic |
| GGTTACCAAAGTGAATCTCA+TGG | 0.554939 | 8.2:+8916673 | None:intergenic |
| TGGAACTGTTCACGTGATGA+AGG | 0.557011 | 8.2:-8917329 | MS.gene063750:intron |
| AGACACCGTATTTCAAGTCA+GGG | 0.563775 | 8.2:-8916919 | MS.gene063750:CDS |
| TCAGGGATTCACCCTCTCCC+AGG | 0.563877 | 8.2:-8916902 | MS.gene063750:CDS |
| ACCAACTCATTCTTGGACCA+AGG | 0.564088 | 8.2:+8916297 | None:intergenic |
| GAATCTCATGGAAAAGTCCT+GGG | 0.569077 | 8.2:+8916685 | None:intergenic |
| AGTTAAGAACTGGACAGAAG+TGG | 0.584067 | 8.2:-8916250 | MS.gene063750:CDS |
| TGGATAGAGAAGAATTTCCC+AGG | 0.586791 | 8.2:-8916702 | MS.gene063750:CDS |
| AATCATACGTTACAATGGAT+AGG | 0.596490 | 8.2:+8916840 | None:intergenic |
| TCCTTGGTCCAAGAATGAGT+TGG | 0.633229 | 8.2:-8916298 | MS.gene063750:CDS |
| GAATCGCCGTCTGAGCACCT+GGG | 0.644858 | 8.2:+8916885 | None:intergenic |
| TTCTTATTGATGATAATCCG+CGG | 0.647289 | 8.2:-8916383 | MS.gene063750:CDS |
| AGTATTAGGAAATTTCGTGT+CGG | 0.674898 | 8.2:-8918098 | MS.gene063750:CDS |
| GCACACTCTATTGCATACCG+CGG | 0.678841 | 8.2:+8916366 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATATAATAAATGTGATT+CGG | + | chr8.2:8917540-8917559 | None:intergenic | 15.0% |
| !!! | TTTCACTAATTTTATTCTTT+CGG | - | chr8.2:8917292-8917311 | MS.gene063750:intron | 15.0% |
| !! | ATATCTGTAACAGAAATTAA+GGG | + | chr8.2:8916954-8916973 | None:intergenic | 20.0% |
| !! | ATCACATTTATTATATGTTC+AGG | - | chr8.2:8917541-8917560 | MS.gene063750:intron | 20.0% |
| !! | CAATATTAAACAAATGTCAT+CGG | - | chr8.2:8916364-8916383 | MS.gene063750:CDS | 20.0% |
| !! | GAAAAATTCATTAGAGAATT+GGG | + | chr8.2:8917209-8917228 | None:intergenic | 20.0% |
| !! | GATAAAAAATAGTACTTGAA+CGG | + | chr8.2:8917846-8917865 | None:intergenic | 20.0% |
| !! | TCTATATTAATACATAAGAC+TGG | + | chr8.2:8916439-8916458 | None:intergenic | 20.0% |
| !!! | AGTTTTCATAATCAAAAAGT+AGG | + | chr8.2:8917980-8917999 | None:intergenic | 20.0% |
| !!! | TTTTATCAAGATTTTTGTGT+AGG | - | chr8.2:8917265-8917284 | MS.gene063750:intron | 20.0% |
| ! | AATAAGCCTAATTTGAATAG+AGG | + | chr8.2:8916484-8916503 | None:intergenic | 25.0% |
| ! | ATAAGCCTAATTTGAATAGA+GGG | + | chr8.2:8916483-8916502 | None:intergenic | 25.0% |
| ! | ATTATCATCAATAAGAACCT+TGG | + | chr8.2:8917916-8917935 | None:intergenic | 25.0% |
| ! | ATTATGAAAACTCATATCCT+TGG | - | chr8.2:8917988-8918007 | MS.gene063750:intron | 25.0% |
| ! | CAAATTTACAACAAAAGCAA+TGG | + | chr8.2:8916901-8916920 | None:intergenic | 25.0% |
| ! | CATATCTGTAACAGAAATTA+AGG | + | chr8.2:8916955-8916974 | None:intergenic | 25.0% |
| ! | CCTATAAATCTATGTTCAAA+GGG | - | chr8.2:8917146-8917165 | MS.gene063750:intron | 25.0% |
| ! | CCTTTGAACATAGATTTATA+GGG | + | chr8.2:8917148-8917167 | None:intergenic | 25.0% |
| ! | CGATGACATTTGTTTAATAT+TGG | + | chr8.2:8916366-8916385 | None:intergenic | 25.0% |
| ! | CTTAATTTCTGTTACAGATA+TGG | - | chr8.2:8916953-8916972 | MS.gene063750:intron | 25.0% |
| ! | GAAAGATTTAGACAGAATTT+GGG | + | chr8.2:8916773-8916792 | None:intergenic | 25.0% |
| ! | GGAAAAATTCATTAGAGAAT+TGG | + | chr8.2:8917210-8917229 | None:intergenic | 25.0% |
| ! | TATTAGAGAAACCATTAGAA+AGG | - | chr8.2:8916557-8916576 | MS.gene063750:intron | 25.0% |
| ! | TTCCTAATTCTTGTTCAAAA+GGG | - | chr8.2:8917226-8917245 | MS.gene063750:intron | 25.0% |
| ! | TTTATTATATGTTCAGGTCT+CGG | - | chr8.2:8917547-8917566 | MS.gene063750:intron | 25.0% |
| ! | TTTCCTAATTCTTGTTCAAA+AGG | - | chr8.2:8917225-8917244 | MS.gene063750:intron | 25.0% |
| !! | TGATATGACTTGATTTTCTT+TGG | - | chr8.2:8917732-8917751 | MS.gene063750:intron | 25.0% |
| !! | TTAATTTTCTTTCGTGATAG+AGG | - | chr8.2:8916513-8916532 | MS.gene063750:intron | 25.0% |
| !!! | AGAACTACTTTTTCTATGAA+TGG | - | chr8.2:8916805-8916824 | MS.gene063750:intron | 25.0% |
| !!! | ATAGCAAAATTGTTCTAAAG+AGG | + | chr8.2:8917010-8917029 | None:intergenic | 25.0% |
| !!! | GAACTACTTTTTCTATGAAT+GGG | - | chr8.2:8916806-8916825 | MS.gene063750:intron | 25.0% |
| !!! | TTCTTTAAGGTATCTTTTGT+TGG | - | chr8.2:8916295-8916314 | MS.gene063750:CDS | 25.0% |
| AACCATTAGAAAGGATTTAG+AGG | - | chr8.2:8916566-8916585 | MS.gene063750:intron | 30.0% | |
| AATACATAAGACTGGAGAAT+AGG | + | chr8.2:8916431-8916450 | None:intergenic | 30.0% | |
| AATCATACGTTACAATGGAT+AGG | + | chr8.2:8917465-8917484 | None:intergenic | 30.0% | |
| ACCAAAATCATACGTTACAA+TGG | + | chr8.2:8917470-8917489 | None:intergenic | 30.0% | |
| ATACATAAGACTGGAGAATA+GGG | + | chr8.2:8916430-8916449 | None:intergenic | 30.0% | |
| ATAGAGAAAAACAGATGAAG+AGG | + | chr8.2:8917713-8917732 | None:intergenic | 30.0% | |
| ATCATAATTCAGTTCCTTGT+TGG | - | chr8.2:8916840-8916859 | MS.gene063750:intron | 30.0% | |
| CATTGTGTACAGAAAATTGT+TGG | - | chr8.2:8917032-8917051 | MS.gene063750:intron | 30.0% | |
| CCCTATAAATCTATGTTCAA+AGG | - | chr8.2:8917145-8917164 | MS.gene063750:intron | 30.0% | |
| CCCTTTGAACATAGATTTAT+AGG | + | chr8.2:8917149-8917168 | None:intergenic | 30.0% | |
| GAACTTGAACAAATCAAACA+AGG | + | chr8.2:8917071-8917090 | None:intergenic | 30.0% | |
| GGAAAGATTTAGACAGAATT+TGG | + | chr8.2:8916774-8916793 | None:intergenic | 30.0% | |
| GTTCTGTCATAAACCAAATT+TGG | + | chr8.2:8916606-8916625 | None:intergenic | 30.0% | |
| TGATGTGAATCTAAACAGTA+GGG | + | chr8.2:8917784-8917803 | None:intergenic | 30.0% | |
| TTAAGGATCACACTATTGAA+TGG | - | chr8.2:8917580-8917599 | MS.gene063750:intron | 30.0% | |
| TTATTCTTTCGGATGACTAA+TGG | - | chr8.2:8917303-8917322 | MS.gene063750:intron | 30.0% | |
| TTTGTGCATATGCTTGAATT+TGG | - | chr8.2:8916917-8916936 | MS.gene063750:CDS | 30.0% | |
| ! | CAACAATTTTCTGTACACAA+TGG | + | chr8.2:8917034-8917053 | None:intergenic | 30.0% |
| ! | GTTTCTCTAATAGTTTTCCT+AGG | + | chr8.2:8916549-8916568 | None:intergenic | 30.0% |
| ! | TCCATTGTAACGTATGATTT+TGG | - | chr8.2:8917466-8917485 | MS.gene063750:intron | 30.0% |
| ! | TTCTTATTGATGATAATCCG+CGG | - | chr8.2:8917919-8917938 | MS.gene063750:intron | 30.0% |
| !! | GTAACGTATGATTTTGGTAT+TGG | - | chr8.2:8917472-8917491 | MS.gene063750:intron | 30.0% |
| !!! | AAGTTTTGTTTTCACGATTG+AGG | - | chr8.2:8917179-8917198 | MS.gene063750:intron | 30.0% |
| !!! | CTTGTTTGTTGTTGTTTTGT+TGG | - | chr8.2:8916676-8916695 | MS.gene063750:CDS | 30.0% |
| AAAACAGATGAAGAGGATCA+AGG | + | chr8.2:8917706-8917725 | None:intergenic | 35.0% | |
| AACCTTAAGAGGAATCTTGT+CGG | - | chr8.2:8917504-8917523 | MS.gene063750:intron | 35.0% | |
| ATATCCCATCAAGTGCAAAA+TGG | + | chr8.2:8917653-8917672 | None:intergenic | 35.0% | |
| CTTTGCCCTCTATTCAAATT+AGG | - | chr8.2:8916475-8916494 | MS.gene063750:intron | 35.0% | |
| GACCAAAATCAGAGATTTGT+AGG | - | chr8.2:8917676-8917695 | MS.gene063750:intron | 35.0% | |
| GACCTCTAAATCCTTTCTAA+TGG | + | chr8.2:8916571-8916590 | None:intergenic | 35.0% | |
| GACTAAAAAATTCACGTGTC+AGG | + | chr8.2:8916724-8916743 | None:intergenic | 35.0% | |
| GGAAGAAAAACAGTAGGAAA+AGG | + | chr8.2:8917810-8917829 | None:intergenic | 35.0% | |
| GGACTTTCATTAACCTTAAG+AGG | - | chr8.2:8917493-8917512 | MS.gene063750:intron | 35.0% | |
| GTGATGTGAATCTAAACAGT+AGG | + | chr8.2:8917785-8917804 | None:intergenic | 35.0% | |
| TAAACAAATGTCATCGGAAC+AGG | - | chr8.2:8916370-8916389 | MS.gene063750:CDS | 35.0% | |
| TAACAGGACTTTAAATGCCA+AGG | - | chr8.2:8917896-8917915 | MS.gene063750:intron | 35.0% | |
| TACATAAGACTGGAGAATAG+GGG | + | chr8.2:8916429-8916448 | None:intergenic | 35.0% | |
| TCATGTGTACGAGTTCTTTA+AGG | - | chr8.2:8916282-8916301 | MS.gene063750:CDS | 35.0% | |
| TCTTAACTTTGGTCACCAAA+GGG | + | chr8.2:8918040-8918059 | None:intergenic | 35.0% | |
| TGGTTTATGACAGAACACTA+TGG | - | chr8.2:8916610-8916629 | MS.gene063750:intron | 35.0% | |
| TTCTGTCCAGTTCTTAACTT+TGG | + | chr8.2:8918051-8918070 | None:intergenic | 35.0% | |
| TTCTTAACTTTGGTCACCAA+AGG | + | chr8.2:8918041-8918060 | None:intergenic | 35.0% | |
| ! | CAATGAGTTGGATCCAAATT+TGG | - | chr8.2:8916590-8916609 | MS.gene063750:intron | 35.0% |
| ! | CACCTACAAATCTCTGATTT+TGG | + | chr8.2:8917681-8917700 | None:intergenic | 35.0% |
| ! | CTTTTCCATGAGATTCACTT+TGG | - | chr8.2:8917624-8917643 | MS.gene063750:intron | 35.0% |
| ! | GACCCTTTTGAACAAGAATT+AGG | + | chr8.2:8917231-8917250 | None:intergenic | 35.0% |
| ! | GTAACCATTTTGCACTTGAT+GGG | - | chr8.2:8917646-8917665 | MS.gene063750:intron | 35.0% |
| ! | TGAATCCCTGACTTGAAATA+CGG | + | chr8.2:8917391-8917410 | None:intergenic | 35.0% |
| !! | AAGTCTCTCTCTTTGAAATC+TGG | - | chr8.2:8917099-8917118 | MS.gene063750:intron | 35.0% |
| !! | ACTTGCTGTTTCTCATTAAC+AGG | - | chr8.2:8917880-8917899 | MS.gene063750:intron | 35.0% |
| !! | GTTCTAGGAAGAAAAACAGT+AGG | + | chr8.2:8917816-8917835 | None:intergenic | 35.0% |
| !! | TTGAACGGATTAAGAGTTCT+AGG | + | chr8.2:8917831-8917850 | None:intergenic | 35.0% |
| !!! | GTTGTTGTTTTGTTGGTCAA+TGG | - | chr8.2:8916683-8916702 | MS.gene063750:CDS | 35.0% |
| AAGTAGTTCTCTTCAGCAAG+AGG | + | chr8.2:8916795-8916814 | None:intergenic | 40.0% | |
| AATCTAAACAGTAGGGAAGG+AGG | + | chr8.2:8917777-8917796 | None:intergenic | 40.0% | |
| ACATAAGACTGGAGAATAGG+GGG | + | chr8.2:8916428-8916447 | None:intergenic | 40.0% | |
| ACCTTAAGAGGAATCTTGTC+GGG | - | chr8.2:8917505-8917524 | MS.gene063750:intron | 40.0% | |
| AGATACACCTAAAGCCAACA+AGG | + | chr8.2:8916857-8916876 | None:intergenic | 40.0% | |
| AGTTAAGAACTGGACAGAAG+TGG | - | chr8.2:8918052-8918071 | MS.gene063750:CDS | 40.0% | |
| CGATCGATGTTCAACAGATA+TGG | + | chr8.2:8916746-8916765 | None:intergenic | 40.0% | |
| CTCATCAACCAACTCATTCT+TGG | + | chr8.2:8918015-8918034 | None:intergenic | 40.0% | |
| GAATCTCATGGAAAAGTCCT+GGG | + | chr8.2:8917620-8917639 | None:intergenic | 40.0% | |
| GGATTTAGAGGTCAATGAGT+TGG | - | chr8.2:8916578-8916597 | MS.gene063750:intron | 40.0% | |
| GGTTACCAAAGTGAATCTCA+TGG | + | chr8.2:8917632-8917651 | None:intergenic | 40.0% | |
| GTCTCGGCAGAATGTAATTA+AGG | - | chr8.2:8917563-8917582 | MS.gene063750:intron | 40.0% | |
| GTGAATCTAAACAGTAGGGA+AGG | + | chr8.2:8917780-8917799 | None:intergenic | 40.0% | |
| TATCTGTTGAACATCGATCG+CGG | - | chr8.2:8916746-8916765 | MS.gene063750:intron | 40.0% | |
| TGAATCTCATGGAAAAGTCC+TGG | + | chr8.2:8917621-8917640 | None:intergenic | 40.0% | |
| TGGATAGAGAAGAATTTCCC+AGG | - | chr8.2:8917600-8917619 | MS.gene063750:intron | 40.0% | |
| TGGTGACCAAAGTTAAGAAC+TGG | - | chr8.2:8918042-8918061 | MS.gene063750:CDS | 40.0% | |
| TTCTTTCGTGATAGAGGTAG+AGG | - | chr8.2:8916519-8916538 | MS.gene063750:intron | 40.0% | |
| ! | AAGACACCGTATTTCAAGTC+AGG | - | chr8.2:8917382-8917401 | MS.gene063750:intron | 40.0% |
| ! | ACAGAAATTAAGGGTGCATC+AGG | + | chr8.2:8916945-8916964 | None:intergenic | 40.0% |
| ! | AGACACCGTATTTCAAGTCA+GGG | - | chr8.2:8917383-8917402 | MS.gene063750:intron | 40.0% |
| ! | GGTAACCATTTTGCACTTGA+TGG | - | chr8.2:8917645-8917664 | MS.gene063750:intron | 40.0% |
| !! | TTCAGTTCCTTGTTGGCTTT+AGG | - | chr8.2:8916847-8916866 | MS.gene063750:intron | 40.0% |
| !! | TTGTTGGCTTTAGGTGTATC+TGG | - | chr8.2:8916856-8916875 | MS.gene063750:CDS | 40.0% |
| ACCAACTCATTCTTGGACCA+AGG | + | chr8.2:8918008-8918027 | None:intergenic | 45.0% | |
| ATAGAGGTAGAGGAAGACCT+AGG | - | chr8.2:8916529-8916548 | MS.gene063750:intron | 45.0% | |
| GCAATAGAGTGTGCTGAAGT+TGG | - | chr8.2:8917945-8917964 | MS.gene063750:intron | 45.0% | |
| TCCCGACAAGATTCCTCTTA+AGG | + | chr8.2:8917509-8917528 | None:intergenic | 45.0% | |
| TCCTTGGTCCAAGAATGAGT+TGG | - | chr8.2:8918004-8918023 | MS.gene063750:intron | 45.0% | |
| TGGAACTGTTCACGTGATGA+AGG | - | chr8.2:8916973-8916992 | MS.gene063750:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr8.2:8916659-8916678 | None:intergenic | 45.0% |
| ! | ACAAGCCTTATCCCACTAAG+TGG | + | chr8.2:8916661-8916680 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr8.2:8916660-8916679 | None:intergenic | 45.0% |
| ! | CTTTCGGATGACTAATGGAC+TGG | - | chr8.2:8917308-8917327 | MS.gene063750:intron | 45.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr8.2:8916655-8916674 | None:intergenic | 50.0% | |
| GCACACTCTATTGCATACCG+CGG | + | chr8.2:8917939-8917958 | None:intergenic | 50.0% | |
| !! | CGGATGACTAATGGACTGGT+TGG | - | chr8.2:8917312-8917331 | MS.gene063750:intron | 50.0% |
| !! | GTTGGTTGATGAGCACCCTT+TGG | - | chr8.2:8918022-8918041 | MS.gene063750:CDS | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr8.2:8916647-8916666 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr8.2:8916646-8916665 | MS.gene063750:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr8.2:8916653-8916672 | MS.gene063750:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr8.2:8916647-8916666 | MS.gene063750:CDS | 55.0% | |
| GAATCGCCGTCTGAGCACCT+GGG | + | chr8.2:8917420-8917439 | None:intergenic | 60.0% | |
| TCAGGGATTCACCCTCTCCC+AGG | - | chr8.2:8917400-8917419 | MS.gene063750:intron | 60.0% | |
| TGAATCGCCGTCTGAGCACC+TGG | + | chr8.2:8917421-8917440 | None:intergenic | 60.0% | |
| CCCTCTCCCAGGTGCTCAGA+CGG | - | chr8.2:8917411-8917430 | MS.gene063750:intron | 65.0% | |
| CCGTCTGAGCACCTGGGAGA+GGG | + | chr8.2:8917414-8917433 | None:intergenic | 65.0% | |
| GCCGTCTGAGCACCTGGGAG+AGG | + | chr8.2:8917415-8917434 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 8916206 | 8918118 | 8916206 | ID=MS.gene063750 |
| chr8.2 | mRNA | 8916206 | 8918118 | 8916206 | ID=MS.gene063750.t1;Parent=MS.gene063750 |
| chr8.2 | exon | 8918021 | 8918118 | 8918021 | ID=MS.gene063750.t1.exon1;Parent=MS.gene063750.t1 |
| chr8.2 | CDS | 8918021 | 8918118 | 8918021 | ID=cds.MS.gene063750.t1;Parent=MS.gene063750.t1 |
| chr8.2 | exon | 8917330 | 8917354 | 8917330 | ID=MS.gene063750.t1.exon2;Parent=MS.gene063750.t1 |
| chr8.2 | CDS | 8917330 | 8917354 | 8917330 | ID=cds.MS.gene063750.t1;Parent=MS.gene063750.t1 |
| chr8.2 | exon | 8916848 | 8916968 | 8916848 | ID=MS.gene063750.t1.exon3;Parent=MS.gene063750.t1 |
| chr8.2 | CDS | 8916848 | 8916968 | 8916848 | ID=cds.MS.gene063750.t1;Parent=MS.gene063750.t1 |
| chr8.2 | exon | 8916627 | 8916761 | 8916627 | ID=MS.gene063750.t1.exon4;Parent=MS.gene063750.t1 |
| chr8.2 | CDS | 8916627 | 8916761 | 8916627 | ID=cds.MS.gene063750.t1;Parent=MS.gene063750.t1 |
| chr8.2 | exon | 8916206 | 8916422 | 8916206 | ID=MS.gene063750.t1.exon5;Parent=MS.gene063750.t1 |
| chr8.2 | CDS | 8916206 | 8916422 | 8916206 | ID=cds.MS.gene063750.t1;Parent=MS.gene063750.t1 |
| Gene Sequence |
| Protein sequence |
