Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064638.t1 | XP_003600261.1 | 95.9 | 542 | 22 | 0 | 1 | 542 | 1 | 542 | 4.80E-303 | 1049.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064638.t1 | Q9LDL7 | 64.3 | 426 | 149 | 2 | 118 | 542 | 67 | 490 | 2.0e-161 | 570.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064638.t1 | G7J211 | 95.9 | 542 | 22 | 0 | 1 | 542 | 1 | 542 | 3.4e-303 | 1049.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene064638.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene064638 | 0.841488 | 4.61E-58 | -1.69E-46 |
| MS.gene04919 | MS.gene064638 | 0.832423 | 9.53E-56 | -1.69E-46 |
| MS.gene04920 | MS.gene064638 | 0.849069 | 4.10E-60 | -1.69E-46 |
| MS.gene049283 | MS.gene064638 | 0.815705 | 8.06E-52 | -1.69E-46 |
| MS.gene049368 | MS.gene064638 | 0.820148 | 7.99E-53 | -1.69E-46 |
| MS.gene049413 | MS.gene064638 | 0.810022 | 1.42E-50 | -1.69E-46 |
| MS.gene049499 | MS.gene064638 | 0.842537 | 2.43E-58 | -1.69E-46 |
| MS.gene049983 | MS.gene064638 | 0.810879 | 9.26E-51 | -1.69E-46 |
| MS.gene050414 | MS.gene064638 | 0.805265 | 1.45E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene064638 | 0.804381 | 2.22E-49 | -1.69E-46 |
| MS.gene051541 | MS.gene064638 | 0.800793 | 1.22E-48 | -1.69E-46 |
| MS.gene051637 | MS.gene064638 | 0.810428 | 1.16E-50 | -1.69E-46 |
| MS.gene052016 | MS.gene064638 | 0.821395 | 4.13E-53 | -1.69E-46 |
| MS.gene052118 | MS.gene064638 | 0.855042 | 8.22E-62 | -1.69E-46 |
| MS.gene052518 | MS.gene064638 | 0.804205 | 2.42E-49 | -1.69E-46 |
| MS.gene053272 | MS.gene064638 | -0.806949 | 6.42E-50 | -1.69E-46 |
| MS.gene054178 | MS.gene064638 | 0.800308 | 1.53E-48 | -1.69E-46 |
| MS.gene05458 | MS.gene064638 | 0.805378 | 1.37E-49 | -1.69E-46 |
| MS.gene054641 | MS.gene064638 | 0.803699 | 3.08E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene064638 | 0.864469 | 1.19E-64 | -1.69E-46 |
| MS.gene054893 | MS.gene064638 | 0.859921 | 2.96E-63 | -1.69E-46 |
| MS.gene055150 | MS.gene064638 | 0.80475 | 1.86E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene064638 | 0.822179 | 2.72E-53 | -1.69E-46 |
| MS.gene057174 | MS.gene064638 | 0.805697 | 1.18E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene064638 | 0.833087 | 6.52E-56 | -1.69E-46 |
| MS.gene057622 | MS.gene064638 | 0.830376 | 3.04E-55 | -1.69E-46 |
| MS.gene058095 | MS.gene064638 | 0.822861 | 1.89E-53 | -1.69E-46 |
| MS.gene058159 | MS.gene064638 | 0.821189 | 4.61E-53 | -1.69E-46 |
| MS.gene058429 | MS.gene064638 | 0.823218 | 1.56E-53 | -1.69E-46 |
| MS.gene058592 | MS.gene064638 | 0.800897 | 1.16E-48 | -1.69E-46 |
| MS.gene058781 | MS.gene064638 | 0.815326 | 9.79E-52 | -1.69E-46 |
| MS.gene05878 | MS.gene064638 | 0.803053 | 4.19E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene064638 | 0.840842 | 6.82E-58 | -1.69E-46 |
| MS.gene059634 | MS.gene064638 | 0.810297 | 1.24E-50 | -1.69E-46 |
| MS.gene059686 | MS.gene064638 | 0.820021 | 8.55E-53 | -1.69E-46 |
| MS.gene05985 | MS.gene064638 | -0.816103 | 6.57E-52 | -1.69E-46 |
| MS.gene060259 | MS.gene064638 | 0.806506 | 7.96E-50 | -1.69E-46 |
| MS.gene060412 | MS.gene064638 | 0.802073 | 6.67E-49 | -1.69E-46 |
| MS.gene060522 | MS.gene064638 | 0.854487 | 1.19E-61 | -1.69E-46 |
| MS.gene060527 | MS.gene064638 | 0.836079 | 1.15E-56 | -1.69E-46 |
| MS.gene060777 | MS.gene064638 | 0.811618 | 6.40E-51 | -1.69E-46 |
| MS.gene060785 | MS.gene064638 | 0.822912 | 1.84E-53 | -1.69E-46 |
| MS.gene060933 | MS.gene064638 | 0.819017 | 1.45E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene064638 | 0.833459 | 5.27E-56 | -1.69E-46 |
| MS.gene060937 | MS.gene064638 | 0.847179 | 1.36E-59 | -1.69E-46 |
| MS.gene061100 | MS.gene064638 | 0.812099 | 5.03E-51 | -1.69E-46 |
| MS.gene061188 | MS.gene064638 | 0.83557 | 1.55E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064638.t1 | MTR_3g056110 | 95.941 | 542 | 22 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1087 |
| MS.gene064638.t1 | MTR_5g094450 | 66.667 | 549 | 159 | 9 | 1 | 542 | 1 | 532 | 0.0 | 722 |
| MS.gene064638.t1 | MTR_5g097480 | 57.713 | 551 | 217 | 6 | 1 | 542 | 1 | 544 | 0.0 | 650 |
| MS.gene064638.t1 | MTR_4g133660 | 48.485 | 561 | 250 | 9 | 1 | 541 | 1 | 542 | 8.19e-178 | 512 |
| MS.gene064638.t1 | MTR_2g026250 | 46.939 | 539 | 229 | 7 | 56 | 542 | 63 | 596 | 4.31e-167 | 487 |
| MS.gene064638.t1 | MTR_2g082090 | 58.065 | 372 | 156 | 0 | 170 | 541 | 207 | 578 | 9.97e-167 | 485 |
| MS.gene064638.t1 | MTR_1g029420 | 50.270 | 370 | 184 | 0 | 173 | 542 | 223 | 592 | 4.79e-142 | 422 |
| MS.gene064638.t1 | MTR_3g089055 | 49.344 | 381 | 192 | 1 | 162 | 542 | 191 | 570 | 2.05e-138 | 412 |
| MS.gene064638.t1 | MTR_3g089055 | 49.344 | 381 | 192 | 1 | 162 | 542 | 186 | 565 | 2.62e-138 | 412 |
| MS.gene064638.t1 | MTR_7g027190 | 33.938 | 551 | 296 | 13 | 21 | 542 | 162 | 673 | 1.08e-77 | 258 |
| MS.gene064638.t1 | MTR_3g065980 | 35.733 | 389 | 215 | 11 | 172 | 542 | 169 | 540 | 1.01e-64 | 220 |
| MS.gene064638.t1 | MTR_4g064150 | 32.804 | 378 | 245 | 6 | 171 | 541 | 357 | 732 | 2.67e-62 | 218 |
| MS.gene064638.t1 | MTR_7g062120 | 30.585 | 376 | 254 | 4 | 171 | 542 | 368 | 740 | 1.20e-61 | 216 |
| MS.gene064638.t1 | MTR_8g442410 | 32.552 | 384 | 238 | 7 | 171 | 542 | 151 | 525 | 2.22e-61 | 211 |
| MS.gene064638.t1 | MTR_4g064160 | 30.822 | 438 | 287 | 8 | 114 | 541 | 252 | 683 | 3.22e-61 | 214 |
| MS.gene064638.t1 | MTR_2g097410 | 31.662 | 379 | 246 | 8 | 171 | 541 | 367 | 740 | 1.16e-60 | 213 |
| MS.gene064638.t1 | MTR_6g047750 | 37.752 | 347 | 187 | 8 | 210 | 542 | 331 | 662 | 8.42e-60 | 209 |
| MS.gene064638.t1 | MTR_2g097390 | 28.980 | 490 | 311 | 12 | 77 | 541 | 163 | 640 | 4.07e-59 | 207 |
| MS.gene064638.t1 | MTR_7g057230 | 34.311 | 341 | 210 | 6 | 208 | 541 | 323 | 656 | 1.17e-58 | 206 |
| MS.gene064638.t1 | MTR_2g097310 | 29.613 | 439 | 284 | 7 | 122 | 541 | 205 | 637 | 2.65e-58 | 205 |
| MS.gene064638.t1 | MTR_2g097350 | 30.159 | 441 | 274 | 10 | 125 | 541 | 209 | 639 | 2.85e-58 | 205 |
| MS.gene064638.t1 | MTR_4g064120 | 30.667 | 375 | 253 | 4 | 171 | 539 | 250 | 623 | 7.28e-57 | 201 |
| MS.gene064638.t1 | MTR_7g074650 | 33.973 | 365 | 226 | 6 | 179 | 542 | 442 | 792 | 1.23e-56 | 203 |
| MS.gene064638.t1 | MTR_4g064180 | 31.283 | 374 | 250 | 4 | 171 | 538 | 250 | 622 | 1.78e-56 | 200 |
| MS.gene064638.t1 | MTR_4g064200 | 31.200 | 375 | 249 | 7 | 171 | 541 | 280 | 649 | 1.09e-54 | 195 |
| MS.gene064638.t1 | MTR_4g097080 | 29.574 | 399 | 246 | 11 | 163 | 542 | 121 | 503 | 2.66e-54 | 191 |
| MS.gene064638.t1 | MTR_4g104020 | 29.167 | 384 | 250 | 5 | 172 | 542 | 146 | 520 | 3.10e-54 | 191 |
| MS.gene064638.t1 | MTR_3g022830 | 28.058 | 417 | 244 | 6 | 176 | 542 | 26 | 436 | 3.14e-53 | 187 |
| MS.gene064638.t1 | MTR_2g097467 | 28.928 | 401 | 278 | 4 | 142 | 541 | 259 | 653 | 1.27e-52 | 190 |
| MS.gene064638.t1 | MTR_4g077760 | 34.278 | 353 | 217 | 8 | 195 | 542 | 213 | 555 | 2.84e-50 | 181 |
| MS.gene064638.t1 | MTR_2g097473 | 29.759 | 373 | 256 | 5 | 171 | 541 | 285 | 653 | 6.32e-49 | 179 |
| MS.gene064638.t1 | MTR_2g097463 | 29.032 | 372 | 260 | 2 | 171 | 541 | 286 | 654 | 9.32e-49 | 179 |
| MS.gene064638.t1 | MTR_4g076020 | 32.162 | 370 | 217 | 10 | 179 | 542 | 88 | 429 | 1.83e-47 | 171 |
| MS.gene064638.t1 | MTR_2g097380 | 26.582 | 474 | 299 | 12 | 77 | 541 | 127 | 560 | 8.70e-47 | 172 |
| MS.gene064638.t1 | MTR_4g102790 | 30.000 | 390 | 243 | 11 | 169 | 541 | 285 | 661 | 1.40e-46 | 173 |
| MS.gene064638.t1 | MTR_5g015490 | 29.668 | 391 | 238 | 12 | 175 | 542 | 114 | 490 | 2.26e-46 | 169 |
| MS.gene064638.t1 | MTR_1g096030 | 29.146 | 398 | 240 | 12 | 172 | 542 | 77 | 459 | 1.49e-43 | 161 |
| MS.gene064638.t1 | MTR_1g069725 | 30.504 | 377 | 237 | 12 | 171 | 541 | 105 | 462 | 1.05e-42 | 159 |
| MS.gene064638.t1 | MTR_2g089100 | 25.532 | 423 | 269 | 10 | 154 | 541 | 31 | 442 | 6.21e-39 | 148 |
| MS.gene064638.t1 | MTR_5g058860 | 31.148 | 366 | 225 | 11 | 194 | 541 | 140 | 496 | 7.29e-39 | 149 |
| MS.gene064638.t1 | MTR_3g072710 | 29.570 | 372 | 225 | 10 | 194 | 541 | 141 | 499 | 4.74e-38 | 147 |
| MS.gene064638.t1 | MTR_2g099110 | 27.041 | 392 | 250 | 10 | 174 | 542 | 73 | 451 | 8.82e-35 | 136 |
| MS.gene064638.t1 | MTR_5g015950 | 25.293 | 427 | 249 | 12 | 172 | 541 | 32 | 445 | 3.66e-34 | 134 |
| MS.gene064638.t1 | MTR_3g053270 | 25.293 | 427 | 249 | 12 | 172 | 541 | 32 | 445 | 3.66e-34 | 134 |
| MS.gene064638.t1 | MTR_4g095500 | 25.118 | 422 | 269 | 9 | 166 | 541 | 47 | 467 | 3.96e-34 | 135 |
| MS.gene064638.t1 | MTR_2g034250 | 26.684 | 386 | 261 | 8 | 172 | 542 | 207 | 585 | 4.49e-34 | 136 |
| MS.gene064638.t1 | MTR_0092s0100 | 26.882 | 372 | 255 | 7 | 174 | 542 | 371 | 728 | 1.13e-32 | 133 |
| MS.gene064638.t1 | MTR_0092s0100 | 26.882 | 372 | 255 | 7 | 174 | 542 | 374 | 731 | 1.17e-32 | 133 |
| MS.gene064638.t1 | MTR_2g034280 | 26.409 | 337 | 233 | 6 | 172 | 499 | 200 | 530 | 1.11e-30 | 126 |
| MS.gene064638.t1 | MTR_2g034260 | 25.959 | 339 | 234 | 6 | 172 | 499 | 207 | 539 | 1.48e-28 | 120 |
| MS.gene064638.t1 | MTR_7g109580 | 24.409 | 381 | 268 | 9 | 171 | 542 | 185 | 554 | 1.80e-28 | 119 |
| MS.gene064638.t1 | MTR_4g026485 | 24.543 | 383 | 249 | 11 | 174 | 542 | 268 | 624 | 2.04e-28 | 120 |
| MS.gene064638.t1 | MTR_4g076140 | 29.596 | 223 | 149 | 3 | 160 | 380 | 32 | 248 | 2.34e-28 | 118 |
| MS.gene064638.t1 | MTR_4g076140 | 37.589 | 141 | 87 | 1 | 403 | 542 | 329 | 469 | 2.29e-26 | 112 |
| MS.gene064638.t1 | MTR_8g093070 | 28.212 | 397 | 246 | 17 | 160 | 541 | 123 | 495 | 1.31e-26 | 113 |
| MS.gene064638.t1 | MTR_1g086970 | 25.429 | 350 | 238 | 9 | 206 | 542 | 139 | 478 | 1.31e-26 | 113 |
| MS.gene064638.t1 | MTR_5g009080 | 28.302 | 212 | 145 | 2 | 172 | 382 | 53 | 258 | 4.19e-26 | 112 |
| MS.gene064638.t1 | MTR_5g009080 | 34.752 | 141 | 91 | 1 | 403 | 542 | 338 | 478 | 2.71e-23 | 103 |
| MS.gene064638.t1 | MTR_8g020840 | 25.310 | 403 | 245 | 15 | 173 | 542 | 169 | 548 | 1.48e-24 | 107 |
| MS.gene064638.t1 | MTR_8g077940 | 24.289 | 387 | 255 | 14 | 171 | 542 | 178 | 541 | 5.97e-16 | 81.3 |
| MS.gene064638.t1 | MTR_3g022580 | 30.894 | 123 | 84 | 1 | 420 | 542 | 62 | 183 | 1.20e-14 | 72.8 |
| MS.gene064638.t1 | MTR_3g022005 | 35.484 | 93 | 60 | 0 | 450 | 542 | 33 | 125 | 2.08e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064638.t1 | AT1G50600 | 55.495 | 546 | 219 | 7 | 1 | 542 | 72 | 597 | 0.0 | 587 |
| MS.gene064638.t1 | AT1G50600 | 55.495 | 546 | 219 | 7 | 1 | 542 | 76 | 601 | 0.0 | 587 |
| MS.gene064638.t1 | AT1G50600 | 55.495 | 546 | 219 | 7 | 1 | 542 | 1 | 526 | 0.0 | 586 |
| MS.gene064638.t1 | AT5G48150 | 64.319 | 426 | 149 | 2 | 118 | 542 | 67 | 490 | 0.0 | 582 |
| MS.gene064638.t1 | AT5G48150 | 64.319 | 426 | 149 | 2 | 118 | 542 | 67 | 490 | 0.0 | 582 |
| MS.gene064638.t1 | AT5G48150 | 64.319 | 426 | 149 | 2 | 118 | 542 | 67 | 490 | 0.0 | 582 |
| MS.gene064638.t1 | AT5G48150 | 64.319 | 426 | 149 | 2 | 118 | 542 | 67 | 490 | 0.0 | 582 |
| MS.gene064638.t1 | AT2G04890 | 59.179 | 414 | 162 | 1 | 129 | 542 | 7 | 413 | 0.0 | 521 |
| MS.gene064638.t1 | AT4G17230 | 48.820 | 551 | 247 | 9 | 1 | 542 | 1 | 525 | 2.44e-170 | 493 |
| MS.gene064638.t1 | AT4G17230 | 48.820 | 551 | 247 | 9 | 1 | 542 | 1 | 525 | 2.44e-170 | 493 |
| MS.gene064638.t1 | AT1G21450 | 42.231 | 502 | 266 | 5 | 63 | 542 | 94 | 593 | 1.10e-136 | 409 |
| MS.gene064638.t1 | AT1G66350 | 36.533 | 375 | 214 | 10 | 172 | 542 | 152 | 506 | 2.20e-68 | 229 |
| MS.gene064638.t1 | AT5G17490 | 36.074 | 377 | 218 | 10 | 172 | 542 | 157 | 516 | 1.86e-67 | 227 |
| MS.gene064638.t1 | AT1G14920 | 35.696 | 381 | 215 | 10 | 172 | 542 | 169 | 529 | 7.12e-67 | 226 |
| MS.gene064638.t1 | AT1G07530 | 33.957 | 374 | 245 | 2 | 170 | 541 | 391 | 764 | 1.33e-66 | 230 |
| MS.gene064638.t1 | AT5G52510 | 37.931 | 348 | 191 | 7 | 210 | 542 | 303 | 640 | 1.27e-65 | 225 |
| MS.gene064638.t1 | AT3G03450 | 35.200 | 375 | 230 | 8 | 172 | 542 | 180 | 545 | 2.32e-65 | 222 |
| MS.gene064638.t1 | AT2G01570 | 36.170 | 376 | 220 | 9 | 172 | 542 | 221 | 581 | 2.88e-65 | 223 |
| MS.gene064638.t1 | AT2G29060 | 32.800 | 375 | 248 | 3 | 171 | 541 | 280 | 654 | 1.04e-62 | 218 |
| MS.gene064638.t1 | AT2G29060 | 32.800 | 375 | 248 | 3 | 171 | 541 | 317 | 691 | 1.94e-62 | 217 |
| MS.gene064638.t1 | AT3G46600 | 30.108 | 372 | 258 | 2 | 172 | 542 | 1 | 371 | 5.75e-55 | 190 |
| MS.gene064638.t1 | AT5G59450 | 28.191 | 376 | 266 | 3 | 171 | 542 | 223 | 598 | 8.23e-55 | 195 |
| MS.gene064638.t1 | AT3G46600 | 30.295 | 373 | 258 | 2 | 171 | 542 | 208 | 579 | 1.07e-54 | 194 |
| MS.gene064638.t1 | AT3G46600 | 30.295 | 373 | 258 | 2 | 171 | 542 | 176 | 547 | 1.33e-54 | 193 |
| MS.gene064638.t1 | AT5G66770 | 33.687 | 377 | 235 | 8 | 172 | 542 | 217 | 584 | 7.80e-54 | 192 |
| MS.gene064638.t1 | AT3G54220 | 31.235 | 413 | 265 | 8 | 134 | 541 | 251 | 649 | 2.50e-53 | 192 |
| MS.gene064638.t1 | AT2G29065 | 31.347 | 386 | 244 | 9 | 171 | 541 | 248 | 627 | 2.50e-53 | 191 |
| MS.gene064638.t1 | AT2G37650 | 28.989 | 376 | 258 | 5 | 171 | 542 | 331 | 701 | 7.01e-53 | 191 |
| MS.gene064638.t1 | AT2G37650 | 28.989 | 376 | 258 | 5 | 171 | 542 | 343 | 713 | 7.97e-53 | 191 |
| MS.gene064638.t1 | AT1G50420 | 27.714 | 433 | 244 | 8 | 172 | 542 | 54 | 479 | 3.48e-52 | 185 |
| MS.gene064638.t1 | AT3G50650 | 34.711 | 363 | 219 | 7 | 189 | 542 | 189 | 542 | 1.59e-51 | 185 |
| MS.gene064638.t1 | AT1G07520 | 29.703 | 404 | 265 | 8 | 150 | 541 | 132 | 528 | 2.77e-50 | 181 |
| MS.gene064638.t1 | AT1G07520 | 29.703 | 404 | 265 | 8 | 150 | 541 | 132 | 528 | 2.77e-50 | 181 |
| MS.gene064638.t1 | AT1G07520 | 29.703 | 404 | 265 | 8 | 150 | 541 | 297 | 693 | 7.55e-50 | 182 |
| MS.gene064638.t1 | AT1G07520 | 29.703 | 404 | 265 | 8 | 150 | 541 | 296 | 692 | 9.01e-50 | 182 |
| MS.gene064638.t1 | AT5G41920 | 31.593 | 383 | 228 | 10 | 172 | 542 | 40 | 400 | 6.97e-49 | 174 |
| MS.gene064638.t1 | AT4G37650 | 27.273 | 396 | 248 | 11 | 175 | 542 | 146 | 529 | 2.63e-44 | 164 |
| MS.gene064638.t1 | AT1G55580 | 27.536 | 414 | 248 | 9 | 172 | 542 | 41 | 445 | 1.17e-40 | 153 |
| MS.gene064638.t1 | AT1G63100 | 29.820 | 389 | 247 | 7 | 171 | 541 | 248 | 628 | 1.26e-39 | 153 |
| MS.gene064638.t1 | AT1G63100 | 29.820 | 389 | 247 | 7 | 171 | 541 | 273 | 653 | 1.32e-39 | 153 |
| MS.gene064638.t1 | AT3G49950 | 25.323 | 387 | 266 | 10 | 172 | 541 | 27 | 407 | 1.31e-35 | 138 |
| MS.gene064638.t1 | AT4G08250 | 29.470 | 302 | 205 | 5 | 244 | 541 | 179 | 476 | 7.82e-34 | 134 |
| MS.gene064638.t1 | AT3G60630 | 28.146 | 302 | 190 | 9 | 254 | 542 | 335 | 622 | 3.14e-24 | 107 |
| MS.gene064638.t1 | AT2G45160 | 25.926 | 351 | 222 | 13 | 207 | 542 | 312 | 639 | 1.76e-23 | 105 |
| MS.gene064638.t1 | AT4G00150 | 25.964 | 389 | 231 | 16 | 172 | 542 | 205 | 554 | 4.77e-23 | 103 |
| MS.gene064638.t1 | AT3G13840 | 25.131 | 382 | 257 | 12 | 173 | 542 | 146 | 510 | 6.46e-22 | 99.8 |
| MS.gene064638.t1 | AT4G36710 | 24.297 | 391 | 251 | 14 | 171 | 542 | 121 | 485 | 1.23e-18 | 89.4 |
| MS.gene064638.t1 | AT5G67411 | 29.381 | 194 | 124 | 6 | 295 | 479 | 9 | 198 | 2.41e-15 | 75.5 |
Find 111 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACCTGTTATTCTAATCTT+TGG | 0.235841 | 3.1:+42325242 | None:intergenic |
| CGCAAAATAGTATCCGTTTC+AGG | 0.240168 | 3.1:-42325569 | MS.gene064638:CDS |
| CTGCAAGAACGGAGCGTTAT+TGG | 0.252017 | 3.1:+42324914 | None:intergenic |
| GTGCACCATCTCTCTCTTCT+AGG | 0.256808 | 3.1:+42324610 | None:intergenic |
| ATCTGCTTCGTTCTTATTAG+AGG | 0.270897 | 3.1:-42325717 | MS.gene064638:CDS |
| CGTGAGCAGAGGGAGAATTT+TGG | 0.286631 | 3.1:+42325945 | None:intergenic |
| GTTTCAAAGATTGCCTCTTC+TGG | 0.289813 | 3.1:-42325503 | MS.gene064638:CDS |
| CAATCTGAAAATCAATTATA+TGG | 0.301988 | 3.1:+42325324 | None:intergenic |
| ATCTTATTGTTTCTTGTGCT+TGG | 0.342571 | 3.1:-42324563 | MS.gene064638:CDS |
| AGCAGATTCTTCTTGAACTT+TGG | 0.342587 | 3.1:+42325733 | None:intergenic |
| CAGGCTCTTGCTCGCCGCCC+TGG | 0.348966 | 3.1:-42325272 | MS.gene064638:CDS |
| CCTCCAAAGATTAGAATAAC+AGG | 0.365174 | 3.1:-42325245 | MS.gene064638:CDS |
| GATGAGAAGGATAGAATGTT+TGG | 0.365693 | 3.1:+42326029 | None:intergenic |
| ATATGTCCGTACTTTAAATT+CGG | 0.373248 | 3.1:-42325401 | MS.gene064638:CDS |
| AGAGATGGTGCACTGTTTCT+TGG | 0.374714 | 3.1:-42324600 | MS.gene064638:CDS |
| CAGGGCGGCGAGCAAGAGCC+TGG | 0.387866 | 3.1:+42325273 | None:intergenic |
| CTAATCTTTGGAGGTCCTCC+AGG | 0.409735 | 3.1:+42325254 | None:intergenic |
| CATTCACTTGAATTTGTCAA+TGG | 0.411268 | 3.1:-42325878 | MS.gene064638:CDS |
| TTCACCGCCACAGCTTCATT+AGG | 0.415811 | 3.1:+42325065 | None:intergenic |
| TAATGTCGAACAGCACTGTT+TGG | 0.423158 | 3.1:-42324808 | MS.gene064638:CDS |
| GTAGAACCTGGACTATTGTT+AGG | 0.425781 | 3.1:+42325914 | None:intergenic |
| CTTGATTGAAGAATTGATGA+AGG | 0.426007 | 3.1:+42324665 | None:intergenic |
| ATCCTCTCTTTGTGATCCCT+TGG | 0.427208 | 3.1:+42324831 | None:intergenic |
| CAGAAACATGAAATTTCTTA+CGG | 0.431673 | 3.1:-42326151 | MS.gene064638:CDS |
| CCTGTTATTCTAATCTTTGG+AGG | 0.435815 | 3.1:+42325245 | None:intergenic |
| GCTCACTCATCTTATGCCTT+AGG | 0.446845 | 3.1:+42325807 | None:intergenic |
| TCATCGTATGCCCGCGGTGG+GGG | 0.447317 | 3.1:-42325206 | MS.gene064638:CDS |
| TGAATGTTCACACTTTCATC+TGG | 0.447610 | 3.1:+42325017 | None:intergenic |
| CGATTGATGTTGTTCTTCCA+AGG | 0.448696 | 3.1:-42324848 | MS.gene064638:CDS |
| TTCGGATATATGTCTGCAAA+TGG | 0.452855 | 3.1:-42325383 | MS.gene064638:CDS |
| ATGAAGGAGCTCAATGGATA+AGG | 0.465572 | 3.1:+42324681 | None:intergenic |
| AGGCAGTCCAATCGAACGAT+TGG | 0.470118 | 3.1:-42325549 | MS.gene064638:CDS |
| TTGTCTAGATTCTCAATTGA+GGG | 0.471983 | 3.1:+42326076 | None:intergenic |
| TGCTTGTTGAAGCAGATTCA+AGG | 0.473275 | 3.1:+42325984 | None:intergenic |
| TTCGATTGGACTGCCTGAAA+CGG | 0.476643 | 3.1:+42325556 | None:intergenic |
| TGGTACATGATGTAGCATAA+TGG | 0.479324 | 3.1:+42325037 | None:intergenic |
| AAATTTCTTACGGCTCTGAC+AGG | 0.480661 | 3.1:-42326141 | MS.gene064638:CDS |
| TGTTCTAGAGTTTGATGAGA+AGG | 0.490850 | 3.1:+42326016 | None:intergenic |
| TCAACTAGAGTCACCACCTT+AGG | 0.493149 | 3.1:+42324951 | None:intergenic |
| ATTCATCGTATGCCCGCGGT+GGG | 0.494640 | 3.1:-42325208 | MS.gene064638:CDS |
| AAGTAAGAATCCTCCGCCTC+AGG | 0.498080 | 3.1:+42325851 | None:intergenic |
| ATCTCTAGCATCTCTACGTT+AGG | 0.500658 | 3.1:+42325764 | None:intergenic |
| ATGGTGCACTGTTTCTTGGT+TGG | 0.503499 | 3.1:-42324596 | MS.gene064638:CDS |
| CAATGGTTCACCTGAGGCGG+AGG | 0.504414 | 3.1:-42325861 | MS.gene064638:CDS |
| GTCACGAGCTTCTGAGTAAG+TGG | 0.507829 | 3.1:-42324734 | MS.gene064638:CDS |
| CAAAATTCTCCCTCTGCTCA+CGG | 0.508135 | 3.1:-42325944 | MS.gene064638:CDS |
| TACGCTCCCAATCGTTCGAT+TGG | 0.508907 | 3.1:+42325542 | None:intergenic |
| GGTGAGAAACCGTGAGCAGA+GGG | 0.510855 | 3.1:+42325935 | None:intergenic |
| GGCAGTCCAATCGAACGATT+GGG | 0.513943 | 3.1:-42325548 | MS.gene064638:CDS |
| TGCACCATCTCTCTCTTCTA+GGG | 0.519166 | 3.1:+42324611 | None:intergenic |
| TTCATCGTATGCCCGCGGTG+GGG | 0.523230 | 3.1:-42325207 | MS.gene064638:CDS |
| TTCTCACCTAACAATAGTCC+AGG | 0.523328 | 3.1:-42325920 | MS.gene064638:CDS |
| TCAGTGGGTGAGTCTAATCC+AGG | 0.526353 | 3.1:-42325291 | MS.gene064638:CDS |
| GTAGATTGTACTTCCAGAAG+AGG | 0.526914 | 3.1:+42325490 | None:intergenic |
| TTAAAATGCAGCGAGCCTAC+TGG | 0.529023 | 3.1:-42325461 | MS.gene064638:CDS |
| ACATGGAGATGGTATCTAGA+GGG | 0.537613 | 3.1:-42325676 | MS.gene064638:CDS |
| TCTTATGCCTTAGGTCATCA+TGG | 0.538147 | 3.1:+42325816 | None:intergenic |
| GATTGATGTTGTTCTTCCAA+GGG | 0.539823 | 3.1:-42324847 | MS.gene064638:CDS |
| ATTGTCTAGATTCTCAATTG+AGG | 0.540884 | 3.1:+42326075 | None:intergenic |
| TGTCAATGGTTCACCTGAGG+CGG | 0.541775 | 3.1:-42325864 | MS.gene064638:CDS |
| ATAGTCCAGGTTCTACGTTA+AGG | 0.542222 | 3.1:-42325907 | MS.gene064638:CDS |
| AGCCATCGCGGAAGCTATGA+AGG | 0.542662 | 3.1:-42325360 | MS.gene064638:CDS |
| TCGTGACAGGTTGCTGCGAT+TGG | 0.544162 | 3.1:-42324988 | MS.gene064638:CDS |
| GGCTAAGCACATGTCTCCTA+AGG | 0.546864 | 3.1:-42324967 | MS.gene064638:CDS |
| TCGACGAAACGCTGCAAGAA+CGG | 0.547227 | 3.1:+42324903 | None:intergenic |
| CTCCTTCATAGCTTCCGCGA+TGG | 0.552554 | 3.1:+42325358 | None:intergenic |
| CTAACAGCACGGAACTCAAA+GGG | 0.561109 | 3.1:+42325131 | None:intergenic |
| TGAACTTAGTAGCTTGCGAA+GGG | 0.564647 | 3.1:-42324773 | MS.gene064638:CDS |
| ATCATGACCATGATGACCTA+AGG | 0.567502 | 3.1:-42325823 | MS.gene064638:CDS |
| TTCATAAAGTACATGCATGT+AGG | 0.567692 | 3.1:+42325424 | None:intergenic |
| ACATTCATAATCATCGTGAC+AGG | 0.575392 | 3.1:-42325001 | MS.gene064638:CDS |
| ACGATTGGGAGCGTACATGT+TGG | 0.575556 | 3.1:-42325534 | MS.gene064638:CDS |
| TCTAACAGCACGGAACTCAA+AGG | 0.577107 | 3.1:+42325130 | None:intergenic |
| TATCGAGACAATTGAATGGA+TGG | 0.577277 | 3.1:-42325603 | MS.gene064638:CDS |
| AAGGCATAAGATGAGTGAGC+TGG | 0.578063 | 3.1:-42325804 | MS.gene064638:CDS |
| ATGATATCGAGACAATTGAA+TGG | 0.578703 | 3.1:-42325607 | MS.gene064638:CDS |
| GTGAACTTAGTAGCTTGCGA+AGG | 0.579196 | 3.1:-42324774 | MS.gene064638:CDS |
| TCTTATTAGAGGCAGAGAAG+TGG | 0.579922 | 3.1:-42325706 | MS.gene064638:CDS |
| ATTGGGAGCGTACATGTTGG+AGG | 0.587024 | 3.1:-42325531 | MS.gene064638:CDS |
| TTATACTTGTGCAAAAGCTG+TGG | 0.587474 | 3.1:-42325636 | MS.gene064638:CDS |
| TATTCATCGTATGCCCGCGG+TGG | 0.589109 | 3.1:-42325209 | MS.gene064638:CDS |
| GCTCTTGCTCGCCGCCCTGG+AGG | 0.590483 | 3.1:-42325269 | MS.gene064638:CDS |
| GAGCTGGAATCTGTTATGCT+CGG | 0.590793 | 3.1:-42325788 | MS.gene064638:CDS |
| AGGTGAGAAACCGTGAGCAG+AGG | 0.591687 | 3.1:+42325934 | None:intergenic |
| TTCCAAGGGATCACAAAGAG+AGG | 0.599204 | 3.1:-42324833 | MS.gene064638:CDS |
| TAATCTTTGGAGGTCCTCCA+GGG | 0.606773 | 3.1:+42325255 | None:intergenic |
| TACGACTCGAGATTCTGTAC+AGG | 0.608834 | 3.1:+42326106 | None:intergenic |
| AACATGGAGATGGTATCTAG+AGG | 0.612916 | 3.1:-42325677 | MS.gene064638:CDS |
| TGTGGCCTTAACGTAGAACC+TGG | 0.618646 | 3.1:+42325902 | None:intergenic |
| CTTCTAGGGTGTAATGTCCA+CGG | 0.620198 | 3.1:+42324625 | None:intergenic |
| GAATTGATGAAGGAGCTCAA+TGG | 0.624450 | 3.1:+42324675 | None:intergenic |
| AATCTTCTCGAGAGCTACCG+TGG | 0.627998 | 3.1:-42324642 | MS.gene064638:CDS |
| ATTTGTCAATGGTTCACCTG+AGG | 0.630937 | 3.1:-42325867 | MS.gene064638:CDS |
| ATATATCCGAATTTAAAGTA+CGG | 0.633125 | 3.1:+42325395 | None:intergenic |
| CATGGAGATGGTATCTAGAG+GGG | 0.636479 | 3.1:-42325675 | MS.gene064638:CDS |
| GATTGGACAAGGAACTCAGT+GGG | 0.641704 | 3.1:-42325306 | MS.gene064638:CDS |
| TCGACCTAATGAAGCTGTGG+CGG | 0.642254 | 3.1:-42325069 | MS.gene064638:CDS |
| TGTTTGGCAGCTGTTATCAG+AGG | 0.643018 | 3.1:+42326045 | None:intergenic |
| GAAAGCAGTTCATTACCAGT+AGG | 0.643103 | 3.1:+42325446 | None:intergenic |
| TAAGCACATGTCTCCTAAGG+TGG | 0.649063 | 3.1:-42324964 | MS.gene064638:CDS |
| TTGCGAAGGGGAAGAAAGAG+TGG | 0.653404 | 3.1:-42324760 | MS.gene064638:CDS |
| ACAAATTCAAGTGAATGTTG+TGG | 0.658905 | 3.1:+42325884 | None:intergenic |
| GTCTGCAAATGGAGCCATCG+CGG | 0.659747 | 3.1:-42325372 | MS.gene064638:CDS |
| ACTTCGACCTAATGAAGCTG+TGG | 0.661187 | 3.1:-42325072 | MS.gene064638:CDS |
| AAGCATACACTCTAACAGCA+CGG | 0.673921 | 3.1:+42325120 | None:intergenic |
| GAACTTAGTAGCTTGCGAAG+GGG | 0.697810 | 3.1:-42324772 | MS.gene064638:CDS |
| CATCGCGGAAGCTATGAAGG+AGG | 0.707945 | 3.1:-42325357 | MS.gene064638:CDS |
| TCTTATTCATCGTATGCCCG+CGG | 0.710163 | 3.1:-42325212 | MS.gene064638:CDS |
| TACACCCTAGAAGAGAGAGA+TGG | 0.711736 | 3.1:-42324615 | MS.gene064638:CDS |
| AGATTGGACAAGGAACTCAG+TGG | 0.725387 | 3.1:-42325307 | MS.gene064638:CDS |
| TCTTTGGAGGTCCTCCAGGG+CGG | 0.760133 | 3.1:+42325258 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATCTGAAAATCAATTATA+TGG | + | chr3.1:42325399-42325418 | None:intergenic | 20.0% |
| !!! | ATATATCCGAATTTAAAGTA+CGG | + | chr3.1:42325328-42325347 | None:intergenic | 20.0% |
| !!! | CATATAATTGATTTTCAGAT+TGG | - | chr3.1:42325397-42325416 | MS.gene064638:CDS | 20.0% |
| ! | ATACCTGTTATTCTAATCTT+TGG | + | chr3.1:42325481-42325500 | None:intergenic | 25.0% |
| ! | ATATGTCCGTACTTTAAATT+CGG | - | chr3.1:42325319-42325338 | MS.gene064638:CDS | 25.0% |
| ! | CAGAAACATGAAATTTCTTA+CGG | - | chr3.1:42324569-42324588 | MS.gene064638:CDS | 25.0% |
| ACAAATTCAAGTGAATGTTG+TGG | + | chr3.1:42324839-42324858 | None:intergenic | 30.0% | |
| ATGATATCGAGACAATTGAA+TGG | - | chr3.1:42325113-42325132 | MS.gene064638:CDS | 30.0% | |
| ATTGTCTAGATTCTCAATTG+AGG | + | chr3.1:42324648-42324667 | None:intergenic | 30.0% | |
| CATTCACTTGAATTTGTCAA+TGG | - | chr3.1:42324842-42324861 | MS.gene064638:CDS | 30.0% | |
| CTTGATTGAAGAATTGATGA+AGG | + | chr3.1:42326058-42326077 | None:intergenic | 30.0% | |
| TTCATAAAGTACATGCATGT+AGG | + | chr3.1:42325299-42325318 | None:intergenic | 30.0% | |
| TTGTCTAGATTCTCAATTGA+GGG | + | chr3.1:42324647-42324666 | None:intergenic | 30.0% | |
| ! | ATCTTATTGTTTCTTGTGCT+TGG | - | chr3.1:42326157-42326176 | MS.gene064638:CDS | 30.0% |
| !! | ATTGATTTTCAGATTGGACA+AGG | - | chr3.1:42325403-42325422 | MS.gene064638:CDS | 30.0% |
| ACATTCATAATCATCGTGAC+AGG | - | chr3.1:42325719-42325738 | MS.gene064638:CDS | 35.0% | |
| AGAGAAGTGGAAGAAAAACA+TGG | - | chr3.1:42325027-42325046 | MS.gene064638:CDS | 35.0% | |
| AGCAGATTCTTCTTGAACTT+TGG | + | chr3.1:42324990-42325009 | None:intergenic | 35.0% | |
| ATCTGCTTCGTTCTTATTAG+AGG | - | chr3.1:42325003-42325022 | MS.gene064638:CDS | 35.0% | |
| CCTCCAAAGATTAGAATAAC+AGG | - | chr3.1:42325475-42325494 | MS.gene064638:CDS | 35.0% | |
| CCTGTTATTCTAATCTTTGG+AGG | + | chr3.1:42325478-42325497 | None:intergenic | 35.0% | |
| GATGAGAAGGATAGAATGTT+TGG | + | chr3.1:42324694-42324713 | None:intergenic | 35.0% | |
| GATTGATGTTGTTCTTCCAA+GGG | - | chr3.1:42325873-42325892 | MS.gene064638:CDS | 35.0% | |
| TATCGAGACAATTGAATGGA+TGG | - | chr3.1:42325117-42325136 | MS.gene064638:CDS | 35.0% | |
| TGAATGTTCACACTTTCATC+TGG | + | chr3.1:42325706-42325725 | None:intergenic | 35.0% | |
| TGGTACATGATGTAGCATAA+TGG | + | chr3.1:42325686-42325705 | None:intergenic | 35.0% | |
| TTATACTTGTGCAAAAGCTG+TGG | - | chr3.1:42325084-42325103 | MS.gene064638:CDS | 35.0% | |
| TTCGGATATATGTCTGCAAA+TGG | - | chr3.1:42325337-42325356 | MS.gene064638:CDS | 35.0% | |
| !! | TGTTCTAGAGTTTGATGAGA+AGG | + | chr3.1:42324707-42324726 | None:intergenic | 35.0% |
| AACATGGAGATGGTATCTAG+AGG | - | chr3.1:42325043-42325062 | MS.gene064638:CDS | 40.0% | |
| AAGCATACACTCTAACAGCA+CGG | + | chr3.1:42325603-42325622 | None:intergenic | 40.0% | |
| ACATGGAGATGGTATCTAGA+GGG | - | chr3.1:42325044-42325063 | MS.gene064638:CDS | 40.0% | |
| ATAGTCCAGGTTCTACGTTA+AGG | - | chr3.1:42324813-42324832 | MS.gene064638:CDS | 40.0% | |
| ATCATGACCATGATGACCTA+AGG | - | chr3.1:42324897-42324916 | MS.gene064638:CDS | 40.0% | |
| ATCTCTAGCATCTCTACGTT+AGG | + | chr3.1:42324959-42324978 | None:intergenic | 40.0% | |
| ATGAAGGAGCTCAATGGATA+AGG | + | chr3.1:42326042-42326061 | None:intergenic | 40.0% | |
| ATTTGTCAATGGTTCACCTG+AGG | - | chr3.1:42324853-42324872 | MS.gene064638:CDS | 40.0% | |
| CGATTGATGTTGTTCTTCCA+AGG | - | chr3.1:42325872-42325891 | MS.gene064638:CDS | 40.0% | |
| CGCAAAATAGTATCCGTTTC+AGG | - | chr3.1:42325151-42325170 | MS.gene064638:CDS | 40.0% | |
| GAAAGCAGTTCATTACCAGT+AGG | + | chr3.1:42325277-42325296 | None:intergenic | 40.0% | |
| GAATTGATGAAGGAGCTCAA+TGG | + | chr3.1:42326048-42326067 | None:intergenic | 40.0% | |
| GTAGAACCTGGACTATTGTT+AGG | + | chr3.1:42324809-42324828 | None:intergenic | 40.0% | |
| GTAGATTGTACTTCCAGAAG+AGG | + | chr3.1:42325233-42325252 | None:intergenic | 40.0% | |
| GTGGAAGAAAAACATGGAGA+TGG | - | chr3.1:42325033-42325052 | MS.gene064638:CDS | 40.0% | |
| GTTTCAAAGATTGCCTCTTC+TGG | - | chr3.1:42325217-42325236 | MS.gene064638:CDS | 40.0% | |
| TAATGTCGAACAGCACTGTT+TGG | - | chr3.1:42325912-42325931 | MS.gene064638:CDS | 40.0% | |
| TCTTATGCCTTAGGTCATCA+TGG | + | chr3.1:42324907-42324926 | None:intergenic | 40.0% | |
| TCTTATTAGAGGCAGAGAAG+TGG | - | chr3.1:42325014-42325033 | MS.gene064638:CDS | 40.0% | |
| TTCTCACCTAACAATAGTCC+AGG | - | chr3.1:42324800-42324819 | MS.gene064638:CDS | 40.0% | |
| ! | AAATTTCTTACGGCTCTGAC+AGG | - | chr3.1:42324579-42324598 | MS.gene064638:CDS | 40.0% |
| ! | TGAACTTAGTAGCTTGCGAA+GGG | - | chr3.1:42325947-42325966 | MS.gene064638:CDS | 40.0% |
| ! | TGCTTGTTGAAGCAGATTCA+AGG | + | chr3.1:42324739-42324758 | None:intergenic | 40.0% |
| AAGGCATAAGATGAGTGAGC+TGG | - | chr3.1:42324916-42324935 | MS.gene064638:CDS | 45.0% | |
| ACTTCGACCTAATGAAGCTG+TGG | - | chr3.1:42325648-42325667 | MS.gene064638:CDS | 45.0% | |
| AGATTGGACAAGGAACTCAG+TGG | - | chr3.1:42325413-42325432 | MS.gene064638:CDS | 45.0% | |
| ATCCTCTCTTTGTGATCCCT+TGG | + | chr3.1:42325892-42325911 | None:intergenic | 45.0% | |
| CAAAATTCTCCCTCTGCTCA+CGG | - | chr3.1:42324776-42324795 | MS.gene064638:CDS | 45.0% | |
| CATGGAGATGGTATCTAGAG+GGG | - | chr3.1:42325045-42325064 | MS.gene064638:CDS | 45.0% | |
| CTAACAGCACGGAACTCAAA+GGG | + | chr3.1:42325592-42325611 | None:intergenic | 45.0% | |
| GAGCTGGAATCTGTTATGCT+CGG | - | chr3.1:42324932-42324951 | MS.gene064638:CDS | 45.0% | |
| GATTGGACAAGGAACTCAGT+GGG | - | chr3.1:42325414-42325433 | MS.gene064638:CDS | 45.0% | |
| GCTCACTCATCTTATGCCTT+AGG | + | chr3.1:42324916-42324935 | None:intergenic | 45.0% | |
| TAAGCACATGTCTCCTAAGG+TGG | - | chr3.1:42325756-42325775 | MS.gene064638:CDS | 45.0% | |
| TACACCCTAGAAGAGAGAGA+TGG | - | chr3.1:42326105-42326124 | MS.gene064638:CDS | 45.0% | |
| TACGACTCGAGATTCTGTAC+AGG | + | chr3.1:42324617-42324636 | None:intergenic | 45.0% | |
| TCAACTAGAGTCACCACCTT+AGG | + | chr3.1:42325772-42325791 | None:intergenic | 45.0% | |
| TCTAACAGCACGGAACTCAA+AGG | + | chr3.1:42325593-42325612 | None:intergenic | 45.0% | |
| TCTTATTCATCGTATGCCCG+CGG | - | chr3.1:42325508-42325527 | MS.gene064638:CDS | 45.0% | |
| TGCACCATCTCTCTCTTCTA+GGG | + | chr3.1:42326112-42326131 | None:intergenic | 45.0% | |
| TGTTTGGCAGCTGTTATCAG+AGG | + | chr3.1:42324678-42324697 | None:intergenic | 45.0% | |
| TTAAAATGCAGCGAGCCTAC+TGG | - | chr3.1:42325259-42325278 | MS.gene064638:CDS | 45.0% | |
| TTCCAAGGGATCACAAAGAG+AGG | - | chr3.1:42325887-42325906 | MS.gene064638:CDS | 45.0% | |
| TTCGATTGGACTGCCTGAAA+CGG | + | chr3.1:42325167-42325186 | None:intergenic | 45.0% | |
| ! | AGAGATGGTGCACTGTTTCT+TGG | - | chr3.1:42326120-42326139 | MS.gene064638:CDS | 45.0% |
| ! | ATGGTGCACTGTTTCTTGGT+TGG | - | chr3.1:42326124-42326143 | MS.gene064638:CDS | 45.0% |
| ! | GAACTTAGTAGCTTGCGAAG+GGG | - | chr3.1:42325948-42325967 | MS.gene064638:CDS | 45.0% |
| ! | GTGAACTTAGTAGCTTGCGA+AGG | - | chr3.1:42325946-42325965 | MS.gene064638:CDS | 45.0% |
| ! | TAATCTTTGGAGGTCCTCCA+GGG | + | chr3.1:42325468-42325487 | None:intergenic | 45.0% |
| !! | CTTCTAGGGTGTAATGTCCA+CGG | + | chr3.1:42326098-42326117 | None:intergenic | 45.0% |
| !! | GCAGAGGGAGAATTTTGGTA+AGG | + | chr3.1:42324773-42324792 | None:intergenic | 45.0% |
| !!! | AAAAAGCGTTTTGCGATGGC+TGG | - | chr3.1:42326009-42326028 | MS.gene064638:CDS | 45.0% |
| !!! | GTGGAAAAAGCGTTTTGCGA+TGG | - | chr3.1:42326005-42326024 | MS.gene064638:CDS | 45.0% |
| AAGTAAGAATCCTCCGCCTC+AGG | + | chr3.1:42324872-42324891 | None:intergenic | 50.0% | |
| AATCTTCTCGAGAGCTACCG+TGG | - | chr3.1:42326078-42326097 | MS.gene064638:CDS | 50.0% | |
| AGGCAGTCCAATCGAACGAT+TGG | - | chr3.1:42325171-42325190 | MS.gene064638:CDS | 50.0% | |
| GGCAGTCCAATCGAACGATT+GGG | - | chr3.1:42325172-42325191 | MS.gene064638:CDS | 50.0% | |
| GGCTAAGCACATGTCTCCTA+AGG | - | chr3.1:42325753-42325772 | MS.gene064638:CDS | 50.0% | |
| GTCACGAGCTTCTGAGTAAG+TGG | - | chr3.1:42325986-42326005 | MS.gene064638:CDS | 50.0% | |
| GTGCACCATCTCTCTCTTCT+AGG | + | chr3.1:42326113-42326132 | None:intergenic | 50.0% | |
| TACGCTCCCAATCGTTCGAT+TGG | + | chr3.1:42325181-42325200 | None:intergenic | 50.0% | |
| TCAGTGGGTGAGTCTAATCC+AGG | - | chr3.1:42325429-42325448 | MS.gene064638:CDS | 50.0% | |
| TCGACCTAATGAAGCTGTGG+CGG | - | chr3.1:42325651-42325670 | MS.gene064638:CDS | 50.0% | |
| TCGACGAAACGCTGCAAGAA+CGG | + | chr3.1:42325820-42325839 | None:intergenic | 50.0% | |
| TGTCAATGGTTCACCTGAGG+CGG | - | chr3.1:42324856-42324875 | MS.gene064638:CDS | 50.0% | |
| TTCACCGCCACAGCTTCATT+AGG | + | chr3.1:42325658-42325677 | None:intergenic | 50.0% | |
| TTGCGAAGGGGAAGAAAGAG+TGG | - | chr3.1:42325960-42325979 | MS.gene064638:CDS | 50.0% | |
| ! | ACGATTGGGAGCGTACATGT+TGG | - | chr3.1:42325186-42325205 | MS.gene064638:CDS | 50.0% |
| ! | ATTGGGAGCGTACATGTTGG+AGG | - | chr3.1:42325189-42325208 | MS.gene064638:CDS | 50.0% |
| ! | CGTGAGCAGAGGGAGAATTT+TGG | + | chr3.1:42324778-42324797 | None:intergenic | 50.0% |
| ! | CTAATCTTTGGAGGTCCTCC+AGG | + | chr3.1:42325469-42325488 | None:intergenic | 50.0% |
| ! | CTGCAAGAACGGAGCGTTAT+TGG | + | chr3.1:42325809-42325828 | None:intergenic | 50.0% |
| ! | TGTGGCCTTAACGTAGAACC+TGG | + | chr3.1:42324821-42324840 | None:intergenic | 50.0% |
| !! | GTGGGGGCGTTGATATAGTA+GGG | - | chr3.1:42325530-42325549 | MS.gene064638:CDS | 50.0% |
| AGCCATCGCGGAAGCTATGA+AGG | - | chr3.1:42325360-42325379 | MS.gene064638:CDS | 55.0% | |
| AGGTGAGAAACCGTGAGCAG+AGG | + | chr3.1:42324789-42324808 | None:intergenic | 55.0% | |
| ATTCATCGTATGCCCGCGGT+GGG | - | chr3.1:42325512-42325531 | MS.gene064638:CDS | 55.0% | |
| CATCGCGGAAGCTATGAAGG+AGG | - | chr3.1:42325363-42325382 | MS.gene064638:CDS | 55.0% | |
| CTCCTTCATAGCTTCCGCGA+TGG | + | chr3.1:42325365-42325384 | None:intergenic | 55.0% | |
| GGTGAGAAACCGTGAGCAGA+GGG | + | chr3.1:42324788-42324807 | None:intergenic | 55.0% | |
| GTCTGCAAATGGAGCCATCG+CGG | - | chr3.1:42325348-42325367 | MS.gene064638:CDS | 55.0% | |
| TATTCATCGTATGCCCGCGG+TGG | - | chr3.1:42325511-42325530 | MS.gene064638:CDS | 55.0% | |
| TCGTGACAGGTTGCTGCGAT+TGG | - | chr3.1:42325732-42325751 | MS.gene064638:CDS | 55.0% | |
| !! | GGTGGGGGCGTTGATATAGT+AGG | - | chr3.1:42325529-42325548 | MS.gene064638:CDS | 55.0% |
| CAATGGTTCACCTGAGGCGG+AGG | - | chr3.1:42324859-42324878 | MS.gene064638:CDS | 60.0% | |
| CTATATCAACGCCCCCACCG+CGG | + | chr3.1:42325528-42325547 | None:intergenic | 60.0% | |
| TATATCAACGCCCCCACCGC+GGG | + | chr3.1:42325527-42325546 | None:intergenic | 60.0% | |
| TTCATCGTATGCCCGCGGTG+GGG | - | chr3.1:42325513-42325532 | MS.gene064638:CDS | 60.0% | |
| ! | TCTTTGGAGGTCCTCCAGGG+CGG | + | chr3.1:42325465-42325484 | None:intergenic | 60.0% |
| TCATCGTATGCCCGCGGTGG+GGG | - | chr3.1:42325514-42325533 | MS.gene064638:CDS | 65.0% | |
| CAGGCTCTTGCTCGCCGCCC+TGG | - | chr3.1:42325448-42325467 | MS.gene064638:CDS | 75.0% | |
| CAGGGCGGCGAGCAAGAGCC+TGG | + | chr3.1:42325450-42325469 | None:intergenic | 75.0% | |
| GCTCTTGCTCGCCGCCCTGG+AGG | - | chr3.1:42325451-42325470 | MS.gene064638:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 42324557 | 42326185 | 42324557 | ID=MS.gene064638 |
| chr3.1 | mRNA | 42324557 | 42326185 | 42324557 | ID=MS.gene064638.t1;Parent=MS.gene064638 |
| chr3.1 | exon | 42324557 | 42326185 | 42324557 | ID=MS.gene064638.t1.exon1;Parent=MS.gene064638.t1 |
| chr3.1 | CDS | 42324557 | 42326185 | 42324557 | ID=cds.MS.gene064638.t1;Parent=MS.gene064638.t1 |
| Gene Sequence |
| Protein sequence |
