Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064699.t1 | XP_024633877.1 | 97.2 | 353 | 10 | 0 | 1 | 353 | 1 | 353 | 2.70E-190 | 674.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064699.t1 | P74038 | 45.6 | 270 | 147 | 0 | 70 | 339 | 4 | 273 | 9.2e-62 | 238.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064699.t1 | A0A072VDF7 | 97.2 | 353 | 10 | 0 | 1 | 353 | 1 | 353 | 2.0e-190 | 674.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene064699 | 0.825326 | 4.98E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene064699 | 0.808628 | 2.82E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene064699 | 0.819768 | 9.77E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene064699 | 0.819039 | 1.43E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene064699 | 0.80024 | 1.58E-48 | -1.69E-46 |
| MS.gene050163 | MS.gene064699 | 0.817352 | 3.45E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene064699 | 0.836582 | 8.60E-57 | -1.69E-46 |
| MS.gene050170 | MS.gene064699 | 0.801018 | 1.10E-48 | -1.69E-46 |
| MS.gene050323 | MS.gene064699 | 0.809153 | 2.18E-50 | -1.69E-46 |
| MS.gene050338 | MS.gene064699 | -0.802851 | 4.61E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene064699 | 0.830953 | 2.20E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene064699 | 0.806734 | 7.12E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene064699 | 0.814246 | 1.70E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene064699 | 0.815477 | 9.06E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene064699 | 0.806875 | 6.65E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene064699 | 0.806896 | 6.58E-50 | -1.69E-46 |
| MS.gene050876 | MS.gene064699 | 0.820369 | 7.11E-53 | -1.69E-46 |
| MS.gene050904 | MS.gene064699 | 0.84413 | 9.15E-59 | -1.69E-46 |
| MS.gene051317 | MS.gene064699 | 0.803962 | 2.71E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene064699 | 0.817331 | 3.49E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene064699 | 0.81644 | 5.52E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene064699 | 0.82346 | 1.37E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene064699 | 0.801569 | 8.46E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene064699 | 0.83638 | 9.68E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene064699 | 0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene064699 | 0.823941 | 1.06E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene064699 | 0.816164 | 6.37E-52 | -1.69E-46 |
| MS.gene055748 | MS.gene064699 | 0.819524 | 1.11E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene064699 | 0.823404 | 1.41E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene064699 | 0.844383 | 7.82E-59 | -1.69E-46 |
| MS.gene056504 | MS.gene064699 | 0.835326 | 1.79E-56 | -1.69E-46 |
| MS.gene056692 | MS.gene064699 | 0.83325 | 5.94E-56 | -1.69E-46 |
| MS.gene056898 | MS.gene064699 | 0.80504 | 1.62E-49 | -1.69E-46 |
| MS.gene058335 | MS.gene064699 | 0.823138 | 1.63E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene064699 | 0.80107 | 1.07E-48 | -1.69E-46 |
| MS.gene058419 | MS.gene064699 | 0.818539 | 1.86E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene064699 | 0.815811 | 7.64E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene064699 | 0.825217 | 5.29E-54 | -1.69E-46 |
| MS.gene05912 | MS.gene064699 | 0.822699 | 2.06E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene064699 | 0.822171 | 2.73E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene064699 | 0.814565 | 1.44E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene064699 | 0.812428 | 4.26E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene064699 | 0.847554 | 1.07E-59 | -1.69E-46 |
| MS.gene060762 | MS.gene064699 | 0.851213 | 1.03E-60 | -1.69E-46 |
| MS.gene06077 | MS.gene064699 | 0.82684 | 2.18E-54 | -1.69E-46 |
| MS.gene060823 | MS.gene064699 | -0.837184 | 6.04E-57 | -1.69E-46 |
| MS.gene060982 | MS.gene064699 | 0.835259 | 1.86E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064699.t1 | MTR_3g112310 | 97.167 | 353 | 10 | 0 | 1 | 353 | 1 | 353 | 0.0 | 700 |
| MS.gene064699.t1 | MTR_3g112310 | 96.951 | 328 | 10 | 0 | 1 | 328 | 1 | 328 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064699.t1 | AT1G45110 | 67.378 | 328 | 98 | 1 | 24 | 351 | 20 | 338 | 8.21e-162 | 456 |
Find 89 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTGCGTTGCGGAAATT+TGG | 0.163996 | 3.4:+97266667 | MS.gene064699:CDS |
| ATTACAAGTTTATTATTATC+TGG | 0.272068 | 3.4:-97263250 | None:intergenic |
| CTAAGAGAATTAATTGAAAA+TGG | 0.305796 | 3.4:+97265730 | MS.gene064699:CDS |
| TGCATGCCCTTCAATCAATA+TGG | 0.318102 | 3.4:-97265662 | None:intergenic |
| ACGAATAGAAAATTCTTTGC+TGG | 0.338729 | 3.4:-97265620 | None:intergenic |
| CACTTGCGTTGCGGAAATTT+GGG | 0.343746 | 3.4:+97266668 | MS.gene064699:CDS |
| TCCACTGATGAATTTACATT+TGG | 0.349806 | 3.4:+97264083 | MS.gene064699:CDS |
| GGGGAAAAGGTAAGTTGCTT+TGG | 0.355232 | 3.4:-97263184 | None:intergenic |
| ACTCGGGATCAAGAAGAAAA+AGG | 0.373239 | 3.4:+97264217 | MS.gene064699:CDS |
| CACCATTGTTCAGGGCTCTC+CGG | 0.379351 | 3.4:+97263595 | MS.gene064699:intron |
| CTTCTTGATCCCGAGTGCTT+TGG | 0.381141 | 3.4:-97264210 | None:intergenic |
| AATCCCAGGTCCATGTGCTT+TGG | 0.393976 | 3.4:+97264034 | MS.gene064699:CDS |
| GAGGTGGAGCAGAAGGATAA+AGG | 0.414381 | 3.4:-97263205 | None:intergenic |
| AGGTGGAGCAGAAGGATAAA+GGG | 0.418031 | 3.4:-97263204 | None:intergenic |
| GGACCTGGGATTGGAACAAC+AGG | 0.427981 | 3.4:-97264023 | None:intergenic |
| GGCAGTGGAAAACGCCATCC+AGG | 0.443924 | 3.4:-97263125 | None:intergenic |
| ATCTTGAAGACATCACCTTC+AGG | 0.445097 | 3.4:+97263424 | MS.gene064699:CDS |
| CTTTCTCAGTTTCTTGAAGA+GGG | 0.449860 | 3.4:+97264297 | MS.gene064699:CDS |
| GGTATCGGCTCTTTCTGCCT+CGG | 0.453758 | 3.4:+97264055 | MS.gene064699:CDS |
| AGGTCCATGTGCTTTGGTAT+CGG | 0.460351 | 3.4:+97264040 | MS.gene064699:CDS |
| GTATCGGCTCTTTCTGCCTC+GGG | 0.462242 | 3.4:+97264056 | MS.gene064699:CDS |
| CGGAAGACACGAGGCACTCT+GGG | 0.466378 | 3.4:+97263646 | MS.gene064699:CDS |
| ACCATTGTTCAGGGCTCTCC+GGG | 0.474185 | 3.4:+97263596 | MS.gene064699:intron |
| GCAGAAGGATAAAGGGGAAA+AGG | 0.477021 | 3.4:-97263197 | None:intergenic |
| AATATGGTAAGTTCTCCCTT+TGG | 0.477519 | 3.4:-97265646 | None:intergenic |
| CAGTGGAAGAGGTGCGGCAG+TGG | 0.480861 | 3.4:-97263140 | None:intergenic |
| AAAGCACATGGACCTGGGAT+TGG | 0.488329 | 3.4:-97264032 | None:intergenic |
| TCGGAAGACACGAGGCACTC+TGG | 0.490083 | 3.4:+97263645 | MS.gene064699:CDS |
| GAACTTACCATATTGATTGA+AGG | 0.490717 | 3.4:+97265655 | MS.gene064699:CDS |
| ATAAGTGACGCTGGAACGCC+TGG | 0.495165 | 3.4:+97263861 | MS.gene064699:CDS |
| AAAGGTAAGTTGCTTTGGAA+TGG | 0.495257 | 3.4:-97263179 | None:intergenic |
| AAAGAGGGAAAATGTTGCTT+CGG | 0.496095 | 3.4:+97263095 | None:intergenic |
| GTTCCTGTTGTTCCAATCCC+AGG | 0.500390 | 3.4:+97264020 | MS.gene064699:CDS |
| ACGCCTGGTATCAGTGATCC+TGG | 0.507533 | 3.4:+97263876 | MS.gene064699:CDS |
| AAGTTGCTTTGGAATGGAAA+AGG | 0.508393 | 3.4:-97263173 | None:intergenic |
| CATGGCTTCAGCAGAGCAAA+CGG | 0.510069 | 3.4:+97264242 | MS.gene064699:CDS |
| CTCCGCTGATGTTATACTAT+CGG | 0.517324 | 3.4:+97263626 | MS.gene064699:CDS |
| AGTGAGATGGAGTTCGGAGG+TGG | 0.517915 | 3.4:-97263221 | None:intergenic |
| GAAGAAGAATACAGTGGAAG+AGG | 0.520210 | 3.4:-97263151 | None:intergenic |
| CAGTGATCCTGGTATGGAGT+TGG | 0.526144 | 3.4:+97263887 | MS.gene064699:CDS |
| CAAATTCAATGAATCACAAA+GGG | 0.528109 | 3.4:+97263791 | MS.gene064699:CDS |
| GATACCAAAGCACATGGACC+TGG | 0.530974 | 3.4:-97264038 | None:intergenic |
| GCTTTCTCAGTTTCTTGAAG+AGG | 0.533813 | 3.4:+97264296 | MS.gene064699:CDS |
| GAGTTCGGAGGTGGAGCAGA+AGG | 0.534037 | 3.4:-97263212 | None:intergenic |
| TGTTGCTTCGGCGATTACCC+TGG | 0.538601 | 3.4:+97263107 | MS.gene064699:CDS |
| TTCTCAAGCTCAATGTCCGA+TGG | 0.538928 | 3.4:-97265703 | None:intergenic |
| TTCTAAAGTTGAACCTCCAT+CGG | 0.541066 | 3.4:+97265687 | MS.gene064699:CDS |
| AAACCCGGTCTTTATCTCGT+TGG | 0.542040 | 3.4:+97263387 | MS.gene064699:CDS |
| AAAGGGAACAACTTGTGCTC+AGG | 0.542988 | 3.4:+97263808 | MS.gene064699:CDS |
| TGGTATCAGTGATCCTGGTA+TGG | 0.543755 | 3.4:+97263881 | MS.gene064699:CDS |
| ATACTTACCAACTCCATACC+AGG | 0.545915 | 3.4:-97263894 | None:intergenic |
| GATGTCTTCAAGATTTCCGA+TGG | 0.546308 | 3.4:-97263415 | None:intergenic |
| AACTTACCATATTGATTGAA+GGG | 0.547874 | 3.4:+97265656 | MS.gene064699:CDS |
| GCTTCGGCGATTACCCTGGA+TGG | 0.551601 | 3.4:+97263111 | MS.gene064699:CDS |
| ATTTGGGAAGCAACTTGAAG+TGG | 0.553937 | 3.4:+97266684 | MS.gene064699:CDS |
| CGCACGCAGCATCTCAAACC+CGG | 0.554576 | 3.4:+97263372 | MS.gene064699:CDS |
| TGTTCCAACGAGATAAAGAC+CGG | 0.559367 | 3.4:-97263391 | None:intergenic |
| CTATATATTCACTTGCGTTG+CGG | 0.562841 | 3.4:+97266659 | MS.gene064699:CDS |
| TATCTCGTTGGAACACCCAT+CGG | 0.564506 | 3.4:+97263399 | MS.gene064699:CDS |
| TATCTGGATGTTGAGTGAGA+TGG | 0.568564 | 3.4:-97263234 | None:intergenic |
| ATGTTGAGTGAGATGGAGTT+CGG | 0.577685 | 3.4:-97263227 | None:intergenic |
| TGGGAAGCAACTTGAAGTGG+AGG | 0.586399 | 3.4:+97266687 | MS.gene064699:CDS |
| GGGAACAACTTGTGCTCAGG+AGG | 0.587717 | 3.4:+97263811 | MS.gene064699:CDS |
| ACAAATTCAATGAATCACAA+AGG | 0.598902 | 3.4:+97263790 | MS.gene064699:CDS |
| GAAAAGGAAGAAGAATACAG+TGG | 0.600108 | 3.4:-97263157 | None:intergenic |
| GCAGTGGAAAACGCCATCCA+GGG | 0.611925 | 3.4:-97263124 | None:intergenic |
| AACTGAGAAAGCTTGTGAGG+AGG | 0.612873 | 3.4:-97264285 | None:intergenic |
| AATGACAAAGTTTCACGAAG+AGG | 0.615304 | 3.4:+97264704 | MS.gene064699:CDS |
| AGAAACTGAGAAAGCTTGTG+AGG | 0.623622 | 3.4:-97264288 | None:intergenic |
| ACCAAATGTAAATTCATCAG+TGG | 0.627138 | 3.4:-97264084 | None:intergenic |
| GTGGCACTTATAAGTGACGC+TGG | 0.634936 | 3.4:+97263852 | MS.gene064699:CDS |
| ATGTCTTCAAGATTTCCGAT+GGG | 0.635435 | 3.4:-97263414 | None:intergenic |
| ATACCAAAGCACATGGACCT+GGG | 0.636160 | 3.4:-97264037 | None:intergenic |
| ATACCAGGATCACTGATACC+AGG | 0.638129 | 3.4:-97263879 | None:intergenic |
| TCAAGCTCAATGTCCGATGG+AGG | 0.640534 | 3.4:-97265700 | None:intergenic |
| TTCCGATAGTATAACATCAG+CGG | 0.642678 | 3.4:-97263628 | None:intergenic |
| GTTGAAACAAGGTGAGATTG+TGG | 0.644732 | 3.4:+97263833 | MS.gene064699:CDS |
| AGAATACAGTGGAAGAGGTG+CGG | 0.646714 | 3.4:-97263146 | None:intergenic |
| AAATGGCGAGAGTCTTTCCA+CGG | 0.651793 | 3.4:+97265747 | MS.gene064699:CDS |
| ATGCAGGCCAAATTATGTGT+TGG | 0.654583 | 3.4:+97263990 | MS.gene064699:intron |
| ATTGGTAGCTGAAAGAACAT+CGG | 0.668003 | 3.4:+97266624 | MS.gene064699:CDS |
| GGTGGAGCAGAAGGATAAAG+GGG | 0.669561 | 3.4:-97263203 | None:intergenic |
| GTGCTCAGGAGGTTGAAACA+AGG | 0.672276 | 3.4:+97263822 | MS.gene064699:CDS |
| TTCATCAGTGGATAAACCCG+AGG | 0.672572 | 3.4:-97264072 | None:intergenic |
| CATCAGCGGAGTTCAACACC+CGG | 0.673155 | 3.4:-97263614 | None:intergenic |
| AGAGCCGATACCAAAGCACA+TGG | 0.677490 | 3.4:-97264044 | None:intergenic |
| TTATACTATCGGAAGACACG+AGG | 0.685377 | 3.4:+97263637 | MS.gene064699:CDS |
| TTGAGTGAGATGGAGTTCGG+AGG | 0.692770 | 3.4:-97263224 | None:intergenic |
| GTTCCAACGAGATAAAGACC+GGG | 0.703315 | 3.4:-97263390 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTAAAAATAATCAAATTA+TGG | + | chr3.4:97265817-97265836 | MS.gene064699:intron | 10.0% |
| !!! | ATTTAAGTTTATCATAATAA+TGG | - | chr3.4:97265436-97265455 | None:intergenic | 10.0% |
| !! | AATAATCAAATTATGGAATA+TGG | + | chr3.4:97265824-97265843 | MS.gene064699:intron | 15.0% |
| !! | ATTACAAGTTTATTATTATC+TGG | - | chr3.4:97263253-97263272 | None:intergenic | 15.0% |
| !!! | AAATTGATTTTTAATCAACT+TGG | + | chr3.4:97266141-97266160 | MS.gene064699:intron | 15.0% |
| !!! | TCATGAATTATTTTAATTGA+AGG | + | chr3.4:97265397-97265416 | MS.gene064699:intron | 15.0% |
| !!! | TTGATTAAAAATCAATTTTG+AGG | - | chr3.4:97266139-97266158 | None:intergenic | 15.0% |
| !! | ACTAGAAAAAATACATTGAT+GGG | - | chr3.4:97264180-97264199 | None:intergenic | 20.0% |
| !! | CAACTCAAAAATATAAAAGT+GGG | - | chr3.4:97264446-97264465 | None:intergenic | 20.0% |
| !! | CATAAGATGAATAAAATTCA+AGG | - | chr3.4:97264558-97264577 | None:intergenic | 20.0% |
| !! | CTAAGAGAATTAATTGAAAA+TGG | + | chr3.4:97265730-97265749 | MS.gene064699:CDS | 20.0% |
| !! | TAAAATTGAATGTGTCTATT+GGG | - | chr3.4:97265782-97265801 | None:intergenic | 20.0% |
| !! | TGACAAAAATTAAGATATGT+GGG | - | chr3.4:97266384-97266403 | None:intergenic | 20.0% |
| !! | TTGACAAAAATTAAGATATG+TGG | - | chr3.4:97266385-97266404 | None:intergenic | 20.0% |
| !! | TTGTTAAAATAAGAACAAAC+AGG | - | chr3.4:97265507-97265526 | None:intergenic | 20.0% |
| !!! | AAATTTGTTGAGAATGAAAA+TGG | - | chr3.4:97266077-97266096 | None:intergenic | 20.0% |
| !!! | ACATTTTTCATTATGCATTT+TGG | + | chr3.4:97263453-97263472 | MS.gene064699:intron | 20.0% |
| !!! | ATCAATGTATTTTTTCTAGT+CGG | + | chr3.4:97264180-97264199 | MS.gene064699:intron | 20.0% |
| !!! | CATGAAAAAGAAATTGTTTT+AGG | + | chr3.4:97264971-97264990 | MS.gene064699:intron | 20.0% |
| !!! | GTTAAAAGTAAAAAAGCATT+TGG | + | chr3.4:97265877-97265896 | MS.gene064699:intron | 20.0% |
| !!! | TAATCATTTTGAAGTGAATA+TGG | + | chr3.4:97265972-97265991 | MS.gene064699:intron | 20.0% |
| !!! | TTATTTGATATTAGCTTTCA+AGG | - | chr3.4:97265944-97265963 | None:intergenic | 20.0% |
| !!! | TTTGTTGAGAGTATTATAAA+GGG | + | chr3.4:97266295-97266314 | MS.gene064699:intron | 20.0% |
| !!! | TTTTGTTGAGAGTATTATAA+AGG | + | chr3.4:97266294-97266313 | MS.gene064699:intron | 20.0% |
| ! | AAGATGAATAAAATTCAAGG+TGG | - | chr3.4:97264555-97264574 | None:intergenic | 25.0% |
| ! | AATCGTTGAAAAAATTTAGC+AGG | - | chr3.4:97264998-97265017 | None:intergenic | 25.0% |
| ! | ACAAATTCAATGAATCACAA+AGG | + | chr3.4:97263790-97263809 | MS.gene064699:CDS | 25.0% |
| ! | AGATGAATAAAATTCAAGGT+GGG | - | chr3.4:97264554-97264573 | None:intergenic | 25.0% |
| ! | ATGAGTGATGTATATTCATT+GGG | - | chr3.4:97265381-97265400 | None:intergenic | 25.0% |
| ! | ATTACGATTAAGGAAAAGTT+TGG | - | chr3.4:97264350-97264369 | None:intergenic | 25.0% |
| ! | CAAATCAAACAAACAGTTTA+AGG | - | chr3.4:97264522-97264541 | None:intergenic | 25.0% |
| ! | CAAATTCAATGAATCACAAA+GGG | + | chr3.4:97263791-97263810 | MS.gene064699:CDS | 25.0% |
| ! | CATTTGGATTTCAACATATA+TGG | + | chr3.4:97265893-97265912 | MS.gene064699:intron | 25.0% |
| ! | CCAACTCAAAAATATAAAAG+TGG | - | chr3.4:97264447-97264466 | None:intergenic | 25.0% |
| ! | CTAAAATTGAATGTGTCTAT+TGG | - | chr3.4:97265783-97265802 | None:intergenic | 25.0% |
| ! | GACTAGAAAAAATACATTGA+TGG | - | chr3.4:97264181-97264200 | None:intergenic | 25.0% |
| ! | GCATATGAGTTAAAAAACTA+AGG | - | chr3.4:97264864-97264883 | None:intergenic | 25.0% |
| ! | TAAGGAATAAAAGAGAAAGT+TGG | - | chr3.4:97265206-97265225 | None:intergenic | 25.0% |
| ! | TCACAAAATTAGCAAATCAA+TGG | - | chr3.4:97264475-97264494 | None:intergenic | 25.0% |
| ! | TCTCTTGTTAATGTAATGTA+CGG | + | chr3.4:97265112-97265131 | MS.gene064699:intron | 25.0% |
| ! | TGAGAAAAACAATAACATGA+TGG | - | chr3.4:97264953-97264972 | None:intergenic | 25.0% |
| ! | TTAATTCATTCCATTAGTGT+TGG | - | chr3.4:97264886-97264905 | None:intergenic | 25.0% |
| !! | AACTTACCATATTGATTGAA+GGG | + | chr3.4:97265656-97265675 | MS.gene064699:CDS | 25.0% |
| !! | AATTTGCTTAAGCTTATCTT+AGG | + | chr3.4:97266165-97266184 | MS.gene064699:intron | 25.0% |
| !! | ATTGACTCATGCTTATTAAT+TGG | + | chr3.4:97266523-97266542 | MS.gene064699:intron | 25.0% |
| !! | ATTTTCACCAACACATAATT+TGG | - | chr3.4:97264000-97264019 | None:intergenic | 25.0% |
| !! | TCTCTTTTATTCCTTAACTA+CGG | + | chr3.4:97265210-97265229 | MS.gene064699:intron | 25.0% |
| !! | TGGAAATATTTTCATAGCAT+AGG | - | chr3.4:97266057-97266076 | None:intergenic | 25.0% |
| !!! | AACATAATCATTGCTTTTTG+CGG | - | chr3.4:97265335-97265354 | None:intergenic | 25.0% |
| !!! | AGTACTTTTAATTTAACCAG+TGG | + | chr3.4:97264828-97264847 | MS.gene064699:intron | 25.0% |
| !!! | ATGTTTTTAGGCTGTTAAAT+TGG | + | chr3.4:97266606-97266625 | MS.gene064699:intron | 25.0% |
| !!! | CCACTTTTATATTTTTGAGT+TGG | + | chr3.4:97264444-97264463 | MS.gene064699:intron | 25.0% |
| !!! | GTACTTTTAATTTAACCAGT+GGG | + | chr3.4:97264829-97264848 | MS.gene064699:intron | 25.0% |
| !!! | TGCTAATTATCTTATTTCTG+TGG | + | chr3.4:97264785-97264804 | MS.gene064699:intron | 25.0% |
| !!! | TTATTTTAACAACGTTCTCT+AGG | + | chr3.4:97265515-97265534 | MS.gene064699:intron | 25.0% |
| !!! | TTGATTTGTTTTCCATGATT+GGG | + | chr3.4:97265056-97265075 | MS.gene064699:intron | 25.0% |
| AAAAACTGAGTGAATGTTGA+GGG | - | chr3.4:97263310-97263329 | None:intergenic | 30.0% | |
| AATAAGAACAAACAGGTCAT+TGG | - | chr3.4:97265500-97265519 | None:intergenic | 30.0% | |
| AATGCATTTGGAAAAGACTT+CGG | - | chr3.4:97266353-97266372 | None:intergenic | 30.0% | |
| AATTAACTGACTGAACGATA+TGG | + | chr3.4:97264107-97264126 | MS.gene064699:intron | 30.0% | |
| AATTTAACCAGTGGGAATAA+AGG | + | chr3.4:97264837-97264856 | MS.gene064699:intron | 30.0% | |
| ACCAAATGTAAATTCATCAG+TGG | - | chr3.4:97264087-97264106 | None:intergenic | 30.0% | |
| ACCTAGAGATAAAATATGCT+AGG | - | chr3.4:97266501-97266520 | None:intergenic | 30.0% | |
| ACGAATAGAAAATTCTTTGC+TGG | - | chr3.4:97265623-97265642 | None:intergenic | 30.0% | |
| AGAACATAGTACTTATGTTC+AGG | - | chr3.4:97264387-97264406 | None:intergenic | 30.0% | |
| ATTAACTGACTGAACGATAT+GGG | + | chr3.4:97264108-97264127 | MS.gene064699:intron | 30.0% | |
| ATTAATTCCTGTCATAAGTG+TGG | + | chr3.4:97265454-97265473 | MS.gene064699:intron | 30.0% | |
| CAATAACATGATGGTAAAGA+AGG | - | chr3.4:97264944-97264963 | None:intergenic | 30.0% | |
| CATGAGTGATGTATATTCAT+TGG | - | chr3.4:97265382-97265401 | None:intergenic | 30.0% | |
| GAAAAATGTTTCATACCTGA+AGG | - | chr3.4:97263442-97263461 | None:intergenic | 30.0% | |
| GAAAAGTAAAGCCTAGAAAA+TGG | - | chr3.4:97263288-97263307 | None:intergenic | 30.0% | |
| TAAGCATGCAATTACGATTA+AGG | - | chr3.4:97264360-97264379 | None:intergenic | 30.0% | |
| TCCACTGATGAATTTACATT+TGG | + | chr3.4:97264083-97264102 | MS.gene064699:CDS | 30.0% | |
| TTAATTCCTGTCATAAGTGT+GGG | + | chr3.4:97265455-97265474 | MS.gene064699:intron | 30.0% | |
| ! | AAACAACACTTAGCTCATTT+TGG | + | chr3.4:97263568-97263587 | MS.gene064699:intron | 30.0% |
| ! | ACCTAGCATATTTTATCTCT+AGG | + | chr3.4:97266497-97266516 | MS.gene064699:intron | 30.0% |
| ! | GAACTTACCATATTGATTGA+AGG | + | chr3.4:97265655-97265674 | MS.gene064699:CDS | 30.0% |
| ! | GCACATCAATTTTGTAGTTT+TGG | + | chr3.4:97265578-97265597 | MS.gene064699:intron | 30.0% |
| ! | TCATTTTCGTTCCATTTTCT+AGG | + | chr3.4:97263274-97263293 | MS.gene064699:intron | 30.0% |
| ! | TTTCTTTTACTAACATGAGC+AGG | - | chr3.4:97266030-97266049 | None:intergenic | 30.0% |
| ! | TTTTCTGTTTGTAACTTCTC+TGG | + | chr3.4:97265282-97265301 | MS.gene064699:intron | 30.0% |
| !! | CTTCATTTTGATGATATTGC+AGG | + | chr3.4:97264661-97264680 | MS.gene064699:intron | 30.0% |
| !! | TTGAGAGTATTATAAAGGGA+GGG | + | chr3.4:97266299-97266318 | MS.gene064699:intron | 30.0% |
| !!! | CTTGATTTGTTTTCCATGAT+TGG | + | chr3.4:97265055-97265074 | MS.gene064699:intron | 30.0% |
| AACTCATATGCCAACACTAA+TGG | + | chr3.4:97264873-97264892 | MS.gene064699:intron | 35.0% | |
| AAGGTGGAGGAGAATATATA+TGG | + | chr3.4:97266262-97266281 | MS.gene064699:intron | 35.0% | |
| AATAAATCCTCATGCAAGGT+GGG | + | chr3.4:97266414-97266433 | MS.gene064699:intron | 35.0% | |
| AATATGGTAAGTTCTCCCTT+TGG | - | chr3.4:97265649-97265668 | None:intergenic | 35.0% | |
| AATGAAGAGTCAACCAATCT+AGG | - | chr3.4:97264648-97264667 | None:intergenic | 35.0% | |
| AATGACAAAGTTTCACGAAG+AGG | + | chr3.4:97264704-97264723 | MS.gene064699:CDS | 35.0% | |
| AGGTGGAGGAGAATATATAT+GGG | + | chr3.4:97266263-97266282 | MS.gene064699:intron | 35.0% | |
| AGTATAAGCAAGTCCTAGAT+TGG | + | chr3.4:97264632-97264651 | MS.gene064699:intron | 35.0% | |
| AGTGATACCTATGTTCGTTA+GGG | + | chr3.4:97264608-97264627 | MS.gene064699:intron | 35.0% | |
| ATAGTTCTCTTGCTCTTTCT+TGG | + | chr3.4:97265152-97265171 | MS.gene064699:intron | 35.0% | |
| ATCAAGAAGAAAAAGGCTCA+TGG | + | chr3.4:97264224-97264243 | MS.gene064699:CDS | 35.0% | |
| ATCCTTCTGACGTCAATATT+TGG | + | chr3.4:97264741-97264760 | MS.gene064699:intron | 35.0% | |
| ATGTCTTCAAGATTTCCGAT+GGG | - | chr3.4:97263417-97263436 | None:intergenic | 35.0% | |
| ATTCCTTAACTCTGGTTGAA+GGG | + | chr3.4:97265015-97265034 | MS.gene064699:intron | 35.0% | |
| CAAAAACTGAGTGAATGTTG+AGG | - | chr3.4:97263311-97263330 | None:intergenic | 35.0% | |
| CTATATATTCACTTGCGTTG+CGG | + | chr3.4:97266659-97266678 | MS.gene064699:CDS | 35.0% | |
| CTTTCTCAGTTTCTTGAAGA+GGG | + | chr3.4:97264297-97264316 | MS.gene064699:CDS | 35.0% | |
| GAAAAGGAAGAAGAATACAG+TGG | - | chr3.4:97263160-97263179 | None:intergenic | 35.0% | |
| GAGTAATAAATCCTCATGCA+AGG | + | chr3.4:97266410-97266429 | MS.gene064699:intron | 35.0% | |
| TAATAAATCCTCATGCAAGG+TGG | + | chr3.4:97266413-97266432 | MS.gene064699:intron | 35.0% | |
| TACCAAATATTGACGTCAGA+AGG | - | chr3.4:97264746-97264765 | None:intergenic | 35.0% | |
| TAGTTCTCTTGCTCTTTCTT+GGG | + | chr3.4:97265153-97265172 | MS.gene064699:intron | 35.0% | |
| TATACTTCCCTAACGAACAT+AGG | - | chr3.4:97264618-97264637 | None:intergenic | 35.0% | |
| TGAAATGAAATTTCCCGAAG+TGG | - | chr3.4:97263729-97263748 | None:intergenic | 35.0% | |
| TGATAAGAGTAAACAAGCAC+AGG | - | chr3.4:97263929-97263948 | None:intergenic | 35.0% | |
| TTCCGATAGTATAACATCAG+CGG | - | chr3.4:97263631-97263650 | None:intergenic | 35.0% | |
| TTTCAACGATTCCTTAACTC+TGG | + | chr3.4:97265007-97265026 | MS.gene064699:intron | 35.0% | |
| ! | ATTGGTAGCTGAAAGAACAT+CGG | + | chr3.4:97266624-97266643 | MS.gene064699:CDS | 35.0% |
| ! | ATTTTCTATTCGTCAGCCAA+AGG | + | chr3.4:97265630-97265649 | MS.gene064699:CDS | 35.0% |
| ! | CATTGATGGGCAATTACTTT+AGG | - | chr3.4:97264167-97264186 | None:intergenic | 35.0% |
| ! | TTTTCTATTCGTCAGCCAAA+GGG | + | chr3.4:97265631-97265650 | MS.gene064699:CDS | 35.0% |
| !! | AAAGGTAAGTTGCTTTGGAA+TGG | - | chr3.4:97263182-97263201 | None:intergenic | 35.0% |
| !! | AAGTTGCTTTGGAATGGAAA+AGG | - | chr3.4:97263176-97263195 | None:intergenic | 35.0% |
| !! | AGCTTATCTTAGGCTTTGTT+TGG | + | chr3.4:97266175-97266194 | MS.gene064699:intron | 35.0% |
| !! | ATTTGTTTTCCATGATTGGG+AGG | + | chr3.4:97265059-97265078 | MS.gene064699:intron | 35.0% |
| !! | GCTTATCTTAGGCTTTGTTT+GGG | + | chr3.4:97266176-97266195 | MS.gene064699:intron | 35.0% |
| !! | GTTGAGAGTATTATAAAGGG+AGG | + | chr3.4:97266298-97266317 | MS.gene064699:intron | 35.0% |
| !! | TTCTAAAGTTGAACCTCCAT+CGG | + | chr3.4:97265687-97265706 | MS.gene064699:CDS | 35.0% |
| !!! | TCAATTTTGTAGTTTTGGCG+CGG | + | chr3.4:97265583-97265602 | MS.gene064699:intron | 35.0% |
| AAAAGGAAGAGGCTTACAAG+GGG | - | chr3.4:97263702-97263721 | None:intergenic | 40.0% | |
| ACAGCCTAAAAACATGTCAG+TGG | - | chr3.4:97266601-97266620 | None:intergenic | 40.0% | |
| ACTCGGGATCAAGAAGAAAA+AGG | + | chr3.4:97264217-97264236 | MS.gene064699:CDS | 40.0% | |
| AGAAACTGAGAAAGCTTGTG+AGG | - | chr3.4:97264291-97264310 | None:intergenic | 40.0% | |
| AGCAGGCAAAATCAACCAAA+TGG | - | chr3.4:97266013-97266032 | None:intergenic | 40.0% | |
| ATACTTACCAACTCCATACC+AGG | - | chr3.4:97263897-97263916 | None:intergenic | 40.0% | |
| ATATGCTAGGTTTGCGTGTT+TGG | - | chr3.4:97266488-97266507 | None:intergenic | 40.0% | |
| ATCTTGAAGACATCACCTTC+AGG | + | chr3.4:97263424-97263443 | MS.gene064699:CDS | 40.0% | |
| ATGAAATTTCCCGAAGTGGA+AGG | - | chr3.4:97263725-97263744 | None:intergenic | 40.0% | |
| ATGCAGGCCAAATTATGTGT+TGG | + | chr3.4:97263990-97264009 | MS.gene064699:intron | 40.0% | |
| ATGTTGAGTGAGATGGAGTT+CGG | - | chr3.4:97263230-97263249 | None:intergenic | 40.0% | |
| ATTTGGGAAGCAACTTGAAG+TGG | + | chr3.4:97266684-97266703 | MS.gene064699:CDS | 40.0% | |
| CAGTGATACCTATGTTCGTT+AGG | + | chr3.4:97264607-97264626 | MS.gene064699:intron | 40.0% | |
| CATGAATATCATCACGCACA+AGG | - | chr3.4:97263973-97263992 | None:intergenic | 40.0% | |
| CTCCGCTGATGTTATACTAT+CGG | + | chr3.4:97263626-97263645 | MS.gene064699:CDS | 40.0% | |
| GAAAAGGAAGAGGCTTACAA+GGG | - | chr3.4:97263703-97263722 | None:intergenic | 40.0% | |
| GAAGAAGAATACAGTGGAAG+AGG | - | chr3.4:97263154-97263173 | None:intergenic | 40.0% | |
| GAGTTAAGAGGGTAAGGAAT+GGG | + | chr3.4:97266198-97266217 | MS.gene064699:intron | 40.0% | |
| GATGTCTTCAAGATTTCCGA+TGG | - | chr3.4:97263418-97263437 | None:intergenic | 40.0% | |
| GATTCCTTAACTCTGGTTGA+AGG | + | chr3.4:97265014-97265033 | MS.gene064699:intron | 40.0% | |
| GCAGGCAAAATCAACCAAAT+GGG | - | chr3.4:97266012-97266031 | None:intergenic | 40.0% | |
| GCTTTCTCAGTTTCTTGAAG+AGG | + | chr3.4:97264296-97264315 | MS.gene064699:CDS | 40.0% | |
| GTGCTATAAAGCTCCAATCA+TGG | - | chr3.4:97265184-97265203 | None:intergenic | 40.0% | |
| GTTGAAACAAGGTGAGATTG+TGG | + | chr3.4:97263833-97263852 | MS.gene064699:CDS | 40.0% | |
| TATAAAAGTGGGAGACGAGA+AGG | - | chr3.4:97264435-97264454 | None:intergenic | 40.0% | |
| TATCTGGATGTTGAGTGAGA+TGG | - | chr3.4:97263237-97263256 | None:intergenic | 40.0% | |
| TGCATGCCCTTCAATCAATA+TGG | - | chr3.4:97265665-97265684 | None:intergenic | 40.0% | |
| TGGGAACTCACAAATGCATT+TGG | - | chr3.4:97266365-97266384 | None:intergenic | 40.0% | |
| TGTTCCAACGAGATAAAGAC+CGG | - | chr3.4:97263394-97263413 | None:intergenic | 40.0% | |
| TTATACTATCGGAAGACACG+AGG | + | chr3.4:97263637-97263656 | MS.gene064699:CDS | 40.0% | |
| TTCATGTTCCTGCAAGTGAA+GGG | - | chr3.4:97263340-97263359 | None:intergenic | 40.0% | |
| TTGGTTCACACCATTGTTCA+GGG | + | chr3.4:97263587-97263606 | MS.gene064699:intron | 40.0% | |
| TTTCATGTTCCTGCAAGTGA+AGG | - | chr3.4:97263341-97263360 | None:intergenic | 40.0% | |
| ! | CGTCAATTTTCGGAGATACA+AGG | + | chr3.4:97264322-97264341 | MS.gene064699:CDS | 40.0% |
| ! | GAAGAGGGTTCGTCAATTTT+CGG | + | chr3.4:97264312-97264331 | MS.gene064699:CDS | 40.0% |
| ! | TCGACCACTGACATGTTTTT+AGG | + | chr3.4:97266594-97266613 | MS.gene064699:intron | 40.0% |
| ! | TCTTCCTTTTCCTTCCACTT+CGG | + | chr3.4:97263712-97263731 | MS.gene064699:intron | 40.0% |
| ! | TTCTCGTCTTTTCTCCCATT+TGG | + | chr3.4:97265995-97266014 | MS.gene064699:intron | 40.0% |
| ! | TTTGGTTCACACCATTGTTC+AGG | + | chr3.4:97263586-97263605 | MS.gene064699:intron | 40.0% |
| !! | CTTGTTTGGGAGGTTGTTTT+TGG | + | chr3.4:97266236-97266255 | MS.gene064699:intron | 40.0% |
| !! | GCTTTGTTTGGGAGTTAAGA+GGG | + | chr3.4:97266187-97266206 | MS.gene064699:intron | 40.0% |
| AAACCCGGTCTTTATCTCGT+TGG | + | chr3.4:97263387-97263406 | MS.gene064699:CDS | 45.0% | |
| AAAGGGAACAACTTGTGCTC+AGG | + | chr3.4:97263808-97263827 | MS.gene064699:CDS | 45.0% | |
| AAATGGCGAGAGTCTTTCCA+CGG | + | chr3.4:97265747-97265766 | MS.gene064699:CDS | 45.0% | |
| AACCTCCCAAACAAGATGAG+GGG | - | chr3.4:97266231-97266250 | None:intergenic | 45.0% | |
| AACTGAGAAAGCTTGTGAGG+AGG | - | chr3.4:97264288-97264307 | None:intergenic | 45.0% | |
| ACAACCTCCCAAACAAGATG+AGG | - | chr3.4:97266233-97266252 | None:intergenic | 45.0% | |
| AGAATACAGTGGAAGAGGTG+CGG | - | chr3.4:97263149-97263168 | None:intergenic | 45.0% | |
| AGGAGAAAGAGAGGAGGAAA+GGG | - | chr3.4:97266456-97266475 | None:intergenic | 45.0% | |
| AGGTCCATGTGCTTTGGTAT+CGG | + | chr3.4:97264040-97264059 | MS.gene064699:CDS | 45.0% | |
| AGGTGGAGCAGAAGGATAAA+GGG | - | chr3.4:97263207-97263226 | None:intergenic | 45.0% | |
| ATAAAGGGAGGGAGACAAGA+TGG | + | chr3.4:97266310-97266329 | MS.gene064699:intron | 45.0% | |
| ATACCAAAGCACATGGACCT+GGG | - | chr3.4:97264040-97264059 | None:intergenic | 45.0% | |
| ATACCAGGATCACTGATACC+AGG | - | chr3.4:97263882-97263901 | None:intergenic | 45.0% | |
| CAACCTCCCAAACAAGATGA+GGG | - | chr3.4:97266232-97266251 | None:intergenic | 45.0% | |
| CACTTGCGTTGCGGAAATTT+GGG | + | chr3.4:97266668-97266687 | MS.gene064699:CDS | 45.0% | |
| CATCCCTTCAACCAGAGTTA+AGG | - | chr3.4:97265021-97265040 | None:intergenic | 45.0% | |
| CTAAGGACCTTTATTCCCAC+TGG | - | chr3.4:97264847-97264866 | None:intergenic | 45.0% | |
| CTATTGGGAAGCTATTACCG+TGG | - | chr3.4:97265767-97265786 | None:intergenic | 45.0% | |
| GAAGTGGAAGGAAAAGGAAG+AGG | - | chr3.4:97263713-97263732 | None:intergenic | 45.0% | |
| GCAGAAGGATAAAGGGGAAA+AGG | - | chr3.4:97263200-97263219 | None:intergenic | 45.0% | |
| GGAAAAGGAAGAGGCTTACA+AGG | - | chr3.4:97263704-97263723 | None:intergenic | 45.0% | |
| GGAGTTAAGAGGGTAAGGAA+TGG | + | chr3.4:97266197-97266216 | MS.gene064699:intron | 45.0% | |
| GGGGAAAAGGTAAGTTGCTT+TGG | - | chr3.4:97263187-97263206 | None:intergenic | 45.0% | |
| GGTATCACTGATGCAACTTG+TGG | - | chr3.4:97264597-97264616 | None:intergenic | 45.0% | |
| GTGCGTGATGATATTCATGC+AGG | + | chr3.4:97263974-97263993 | MS.gene064699:intron | 45.0% | |
| GTTCCAACGAGATAAAGACC+GGG | - | chr3.4:97263393-97263412 | None:intergenic | 45.0% | |
| GTTTGGGAGTTAAGAGGGTA+AGG | + | chr3.4:97266192-97266211 | MS.gene064699:intron | 45.0% | |
| TATCTCGTTGGAACACCCAT+CGG | + | chr3.4:97263399-97263418 | MS.gene064699:CDS | 45.0% | |
| TATGTGCCCACACTTATGAC+AGG | - | chr3.4:97265464-97265483 | None:intergenic | 45.0% | |
| TCACTTGCGTTGCGGAAATT+TGG | + | chr3.4:97266667-97266686 | MS.gene064699:CDS | 45.0% | |
| TCCATGATTGGGAGGTTATG+CGG | + | chr3.4:97265067-97265086 | MS.gene064699:intron | 45.0% | |
| TCCTCAAGATTGGTGAAGCT+GGG | + | chr3.4:97265250-97265269 | MS.gene064699:intron | 45.0% | |
| TGGTATCAGTGATCCTGGTA+TGG | + | chr3.4:97263881-97263900 | MS.gene064699:CDS | 45.0% | |
| TGGTGCAGTAACCGTAGTTA+AGG | - | chr3.4:97265224-97265243 | None:intergenic | 45.0% | |
| TTAAGAGGGTAAGGAATGGG+AGG | + | chr3.4:97266201-97266220 | MS.gene064699:intron | 45.0% | |
| TTCATCAGTGGATAAACCCG+AGG | - | chr3.4:97264075-97264094 | None:intergenic | 45.0% | |
| TTCTCAAGCTCAATGTCCGA+TGG | - | chr3.4:97265706-97265725 | None:intergenic | 45.0% | |
| TTCTTGGGTCATGCCATGAT+TGG | + | chr3.4:97265168-97265187 | MS.gene064699:intron | 45.0% | |
| TTTCCCGAAGTGGAAGGAAA+AGG | - | chr3.4:97263719-97263738 | None:intergenic | 45.0% | |
| ! | CTGGTTGAAGGGATGCTTTT+GGG | + | chr3.4:97265026-97265045 | MS.gene064699:intron | 45.0% |
| ! | CTTCCTTTTCCTTCCACTTC+GGG | + | chr3.4:97263713-97263732 | MS.gene064699:intron | 45.0% |
| ! | GAGAACCCCTCATCTTGTTT+GGG | + | chr3.4:97266223-97266242 | MS.gene064699:intron | 45.0% |
| ! | TCTGGTTGAAGGGATGCTTT+TGG | + | chr3.4:97265025-97265044 | MS.gene064699:intron | 45.0% |
| !! | AGAGCTTTGAGGAGAAAGAG+AGG | - | chr3.4:97266465-97266484 | None:intergenic | 45.0% |
| !! | CGGTTTTCTTCCAAAGCACT+CGG | + | chr3.4:97264200-97264219 | MS.gene064699:CDS | 45.0% |
| !! | GGCTTTGTTTGGGAGTTAAG+AGG | + | chr3.4:97266186-97266205 | MS.gene064699:intron | 45.0% |
| !! | GGTTTTCTTCCAAAGCACTC+GGG | + | chr3.4:97264201-97264220 | MS.gene064699:CDS | 45.0% |
| !!! | AGGTTGTTTTTGGAGCAAGG+TGG | + | chr3.4:97266246-97266265 | MS.gene064699:intron | 45.0% |
| !!! | TAGTTTTGGCGCGGTACTTT+TGG | + | chr3.4:97265592-97265611 | MS.gene064699:intron | 45.0% |
| !!! | TTGTTTTTGGAGCAAGGTGG+AGG | + | chr3.4:97266249-97266268 | MS.gene064699:intron | 45.0% |
| AAAGAGAGGAGGAAAGGGGA+AGG | - | chr3.4:97266451-97266470 | None:intergenic | 50.0% | |
| AAAGCACATGGACCTGGGAT+TGG | - | chr3.4:97264035-97264054 | None:intergenic | 50.0% | |
| AATCCCAGGTCCATGTGCTT+TGG | + | chr3.4:97264034-97264053 | MS.gene064699:CDS | 50.0% | |
| ACCAATCTTGAGGAGAGGCA+TGG | - | chr3.4:97265244-97265263 | None:intergenic | 50.0% | |
| ACCATGCCTCTCCTCAAGAT+TGG | + | chr3.4:97265240-97265259 | MS.gene064699:intron | 50.0% | |
| AGAGCCGATACCAAAGCACA+TGG | - | chr3.4:97264047-97264066 | None:intergenic | 50.0% | |
| CAGTGATCCTGGTATGGAGT+TGG | + | chr3.4:97263887-97263906 | MS.gene064699:CDS | 50.0% | |
| CATGGCTTCAGCAGAGCAAA+CGG | + | chr3.4:97264242-97264261 | MS.gene064699:CDS | 50.0% | |
| CCTCAAGATTGGTGAAGCTG+GGG | + | chr3.4:97265251-97265270 | MS.gene064699:intron | 50.0% | |
| CTCCTCAAGATTGGTGAAGC+TGG | + | chr3.4:97265249-97265268 | MS.gene064699:intron | 50.0% | |
| CTTCTTGATCCCGAGTGCTT+TGG | - | chr3.4:97264213-97264232 | None:intergenic | 50.0% | |
| GAGGAGAAAGAGAGGAGGAA+AGG | - | chr3.4:97266457-97266476 | None:intergenic | 50.0% | |
| GAGGTGGAGCAGAAGGATAA+AGG | - | chr3.4:97263208-97263227 | None:intergenic | 50.0% | |
| GATACCAAAGCACATGGACC+TGG | - | chr3.4:97264041-97264060 | None:intergenic | 50.0% | |
| GCTTCACCAATCTTGAGGAG+AGG | - | chr3.4:97265249-97265268 | None:intergenic | 50.0% | |
| GGAGAAAGAGAGGAGGAAAG+GGG | - | chr3.4:97266455-97266474 | None:intergenic | 50.0% | |
| GGAGAACCCCTCATCTTGTT+TGG | + | chr3.4:97266222-97266241 | MS.gene064699:intron | 50.0% | |
| GGTGGAGCAGAAGGATAAAG+GGG | - | chr3.4:97263206-97263225 | None:intergenic | 50.0% | |
| GTGCTCAGGAGGTTGAAACA+AGG | + | chr3.4:97263822-97263841 | MS.gene064699:CDS | 50.0% | |
| GTGGCACTTATAAGTGACGC+TGG | + | chr3.4:97263852-97263871 | MS.gene064699:CDS | 50.0% | |
| GTTCCTGTTGTTCCAATCCC+AGG | + | chr3.4:97264020-97264039 | MS.gene064699:CDS | 50.0% | |
| TCAAGCTCAATGTCCGATGG+AGG | - | chr3.4:97265703-97265722 | None:intergenic | 50.0% | |
| TGAGTCTTCCCTTCACTTGC+AGG | + | chr3.4:97263329-97263348 | MS.gene064699:intron | 50.0% | |
| TGCGTGTTTGGAGAGCTTTG+AGG | - | chr3.4:97266476-97266495 | None:intergenic | 50.0% | |
| TGGGAAGCAACTTGAAGTGG+AGG | + | chr3.4:97266687-97266706 | MS.gene064699:CDS | 50.0% | |
| TTGAGTGAGATGGAGTTCGG+AGG | - | chr3.4:97263227-97263246 | None:intergenic | 50.0% | |
| ! | AACCCCTCATCTTGTTTGGG+AGG | + | chr3.4:97266226-97266245 | MS.gene064699:intron | 50.0% |
| !! | GCTTTGAGGAGAAAGAGAGG+AGG | - | chr3.4:97266462-97266481 | None:intergenic | 50.0% |
| !!! | GGGAGGTTGTTTTTGGAGCA+AGG | + | chr3.4:97266243-97266262 | MS.gene064699:intron | 50.0% |
| ACCATTGTTCAGGGCTCTCC+GGG | + | chr3.4:97263596-97263615 | MS.gene064699:intron | 55.0% | |
| ACGCCTGGTATCAGTGATCC+TGG | + | chr3.4:97263876-97263895 | MS.gene064699:CDS | 55.0% | |
| AGTGAGATGGAGTTCGGAGG+TGG | - | chr3.4:97263224-97263243 | None:intergenic | 55.0% | |
| ATAAGTGACGCTGGAACGCC+TGG | + | chr3.4:97263861-97263880 | MS.gene064699:CDS | 55.0% | |
| CACCATTGTTCAGGGCTCTC+CGG | + | chr3.4:97263595-97263614 | MS.gene064699:intron | 55.0% | |
| CATCAGCGGAGTTCAACACC+CGG | - | chr3.4:97263617-97263636 | None:intergenic | 55.0% | |
| CCCCAGCTTCACCAATCTTG+AGG | - | chr3.4:97265254-97265273 | None:intergenic | 55.0% | |
| GCAGTGGAAAACGCCATCCA+GGG | - | chr3.4:97263127-97263146 | None:intergenic | 55.0% | |
| GCCGCATAACCTCCCAATCA+TGG | - | chr3.4:97265071-97265090 | None:intergenic | 55.0% | |
| GGACCTGGGATTGGAACAAC+AGG | - | chr3.4:97264026-97264045 | None:intergenic | 55.0% | |
| GGGAACAACTTGTGCTCAGG+AGG | + | chr3.4:97263811-97263830 | MS.gene064699:CDS | 55.0% | |
| GTAGTCTCCCACCTTGCATG+AGG | - | chr3.4:97266424-97266443 | None:intergenic | 55.0% | |
| ! | TGTTGCTTCGGCGATTACCC+TGG | + | chr3.4:97263107-97263126 | MS.gene064699:CDS | 55.0% |
| !! | GGTATCGGCTCTTTCTGCCT+CGG | + | chr3.4:97264055-97264074 | MS.gene064699:CDS | 55.0% |
| !! | GTATCGGCTCTTTCTGCCTC+GGG | + | chr3.4:97264056-97264075 | MS.gene064699:CDS | 55.0% |
| ACCCGGAGAGCCCTGAACAA+TGG | - | chr3.4:97263600-97263619 | None:intergenic | 60.0% | |
| CGCACGCAGCATCTCAAACC+CGG | + | chr3.4:97263372-97263391 | MS.gene064699:CDS | 60.0% | |
| GAGTTCGGAGGTGGAGCAGA+AGG | - | chr3.4:97263215-97263234 | None:intergenic | 60.0% | |
| GCTTCGGCGATTACCCTGGA+TGG | + | chr3.4:97263111-97263130 | MS.gene064699:CDS | 60.0% | |
| GGCAGTGGAAAACGCCATCC+AGG | - | chr3.4:97263128-97263147 | None:intergenic | 60.0% | |
| ! | CGGAAGACACGAGGCACTCT+GGG | + | chr3.4:97263646-97263665 | MS.gene064699:CDS | 60.0% |
| ! | TCGGAAGACACGAGGCACTC+TGG | + | chr3.4:97263645-97263664 | MS.gene064699:CDS | 60.0% |
| ! | CAGTGGAAGAGGTGCGGCAG+TGG | - | chr3.4:97263143-97263162 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 97263106 | 97266723 | 97263106 | ID=MS.gene064699 |
| chr3.4 | mRNA | 97263106 | 97266723 | 97263106 | ID=MS.gene064699.t1;Parent=MS.gene064699 |
| chr3.4 | exon | 97263106 | 97263267 | 97263106 | ID=MS.gene064699.t1.exon1;Parent=MS.gene064699.t1 |
| chr3.4 | CDS | 97263106 | 97263267 | 97263106 | ID=cds.MS.gene064699.t1;Parent=MS.gene064699.t1 |
| chr3.4 | exon | 97263351 | 97263445 | 97263351 | ID=MS.gene064699.t1.exon2;Parent=MS.gene064699.t1 |
| chr3.4 | CDS | 97263351 | 97263445 | 97263351 | ID=cds.MS.gene064699.t1;Parent=MS.gene064699.t1 |
| chr3.4 | exon | 97263608 | 97263704 | 97263608 | ID=MS.gene064699.t1.exon3;Parent=MS.gene064699.t1 |
| chr3.4 | CDS | 97263608 | 97263704 | 97263608 | ID=cds.MS.gene064699.t1;Parent=MS.gene064699.t1 |
| chr3.4 | exon | 97263780 | 97263908 | 97263780 | ID=MS.gene064699.t1.exon4;Parent=MS.gene064699.t1 |
| chr3.4 | CDS | 97263780 | 97263908 | 97263780 | ID=cds.MS.gene064699.t1;Parent=MS.gene064699.t1 |
| chr3.4 | exon | 97263996 | 97264104 | 97263996 | ID=MS.gene064699.t1.exon5;Parent=MS.gene064699.t1 |
| chr3.4 | CDS | 97263996 | 97264104 | 97263996 | ID=cds.MS.gene064699.t1;Parent=MS.gene064699.t1 |
| chr3.4 | exon | 97264199 | 97264343 | 97264199 | ID=MS.gene064699.t1.exon6;Parent=MS.gene064699.t1 |
| chr3.4 | CDS | 97264199 | 97264343 | 97264199 | ID=cds.MS.gene064699.t1;Parent=MS.gene064699.t1 |
| chr3.4 | exon | 97264683 | 97264725 | 97264683 | ID=MS.gene064699.t1.exon7;Parent=MS.gene064699.t1 |
| chr3.4 | CDS | 97264683 | 97264725 | 97264683 | ID=cds.MS.gene064699.t1;Parent=MS.gene064699.t1 |
| chr3.4 | exon | 97265595 | 97265768 | 97265595 | ID=MS.gene064699.t1.exon8;Parent=MS.gene064699.t1 |
| chr3.4 | CDS | 97265595 | 97265768 | 97265595 | ID=cds.MS.gene064699.t1;Parent=MS.gene064699.t1 |
| chr3.4 | exon | 97266616 | 97266723 | 97266616 | ID=MS.gene064699.t1.exon9;Parent=MS.gene064699.t1 |
| chr3.4 | CDS | 97266616 | 97266723 | 97266616 | ID=cds.MS.gene064699.t1;Parent=MS.gene064699.t1 |
| Gene Sequence |
| Protein sequence |
