Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065446.t1 | XP_003604371.1 | 94.6 | 74 | 4 | 0 | 121 | 194 | 193 | 266 | 1.50E-29 | 140.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065446.t1 | Q9LVZ6 | 65.9 | 82 | 27 | 1 | 121 | 201 | 210 | 291 | 3.4e-22 | 107.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065446.t1 | G7JGX5 | 94.6 | 74 | 4 | 0 | 121 | 194 | 193 | 266 | 1.1e-29 | 140.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049254 | MS.gene065446 | 0.848756 | 5.00E-60 | -1.69E-46 |
MS.gene049404 | MS.gene065446 | 0.818454 | 1.94E-52 | -1.69E-46 |
MS.gene050026 | MS.gene065446 | 0.829798 | 4.21E-55 | -1.69E-46 |
MS.gene050273 | MS.gene065446 | 0.808886 | 2.48E-50 | -1.69E-46 |
MS.gene050559 | MS.gene065446 | 0.804683 | 1.92E-49 | -1.69E-46 |
MS.gene051181 | MS.gene065446 | 0.814237 | 1.71E-51 | -1.69E-46 |
MS.gene051279 | MS.gene065446 | 0.830663 | 2.59E-55 | -1.69E-46 |
MS.gene051594 | MS.gene065446 | 0.845462 | 4.00E-59 | -1.69E-46 |
MS.gene051613 | MS.gene065446 | 0.81182 | 5.78E-51 | -1.69E-46 |
MS.gene051719 | MS.gene065446 | 0.806916 | 6.52E-50 | -1.69E-46 |
MS.gene051720 | MS.gene065446 | 0.804003 | 2.66E-49 | -1.69E-46 |
MS.gene051744 | MS.gene065446 | 0.819453 | 1.15E-52 | -1.69E-46 |
MS.gene051957 | MS.gene065446 | 0.800368 | 1.49E-48 | -1.69E-46 |
MS.gene052239 | MS.gene065446 | -0.803737 | 3.02E-49 | -1.69E-46 |
MS.gene052447 | MS.gene065446 | 0.839632 | 1.41E-57 | -1.69E-46 |
MS.gene052519 | MS.gene065446 | 0.840833 | 6.85E-58 | -1.69E-46 |
MS.gene052582 | MS.gene065446 | 0.840962 | 6.34E-58 | -1.69E-46 |
MS.gene052584 | MS.gene065446 | 0.844724 | 6.33E-59 | -1.69E-46 |
MS.gene053006 | MS.gene065446 | 0.811328 | 7.40E-51 | -1.69E-46 |
MS.gene053082 | MS.gene065446 | 0.807043 | 6.13E-50 | -1.69E-46 |
MS.gene053226 | MS.gene065446 | 0.812637 | 3.84E-51 | -1.69E-46 |
MS.gene05365 | MS.gene065446 | 0.81059 | 1.07E-50 | -1.69E-46 |
MS.gene053883 | MS.gene065446 | 0.80506 | 1.60E-49 | -1.69E-46 |
MS.gene05415 | MS.gene065446 | 0.822404 | 2.41E-53 | -1.69E-46 |
MS.gene05423 | MS.gene065446 | 0.831268 | 1.84E-55 | -1.69E-46 |
MS.gene054651 | MS.gene065446 | 0.839405 | 1.62E-57 | -1.69E-46 |
MS.gene054775 | MS.gene065446 | 0.813397 | 2.61E-51 | -1.69E-46 |
MS.gene054991 | MS.gene065446 | 0.823485 | 1.35E-53 | -1.69E-46 |
MS.gene055589 | MS.gene065446 | 0.802256 | 6.12E-49 | -1.69E-46 |
MS.gene055778 | MS.gene065446 | 0.816109 | 6.55E-52 | -1.69E-46 |
MS.gene055818 | MS.gene065446 | 0.816345 | 5.80E-52 | -1.69E-46 |
MS.gene056050 | MS.gene065446 | 0.810434 | 1.15E-50 | -1.69E-46 |
MS.gene056174 | MS.gene065446 | 0.849324 | 3.48E-60 | -1.69E-46 |
MS.gene056366 | MS.gene065446 | 0.818489 | 1.91E-52 | -1.69E-46 |
MS.gene05686 | MS.gene065446 | 0.811804 | 5.83E-51 | -1.69E-46 |
MS.gene057060 | MS.gene065446 | 0.804861 | 1.76E-49 | -1.69E-46 |
MS.gene057208 | MS.gene065446 | 0.820946 | 5.24E-53 | -1.69E-46 |
MS.gene057414 | MS.gene065446 | 0.829533 | 4.88E-55 | -1.69E-46 |
MS.gene057444 | MS.gene065446 | 0.823021 | 1.73E-53 | -1.69E-46 |
MS.gene057921 | MS.gene065446 | 0.805052 | 1.61E-49 | -1.69E-46 |
MS.gene058037 | MS.gene065446 | 0.814597 | 1.42E-51 | -1.69E-46 |
MS.gene058294 | MS.gene065446 | 0.810573 | 1.08E-50 | -1.69E-46 |
MS.gene058625 | MS.gene065446 | 0.814342 | 1.62E-51 | -1.69E-46 |
MS.gene058979 | MS.gene065446 | 0.803973 | 2.70E-49 | -1.69E-46 |
MS.gene059015 | MS.gene065446 | 0.815559 | 8.69E-52 | -1.69E-46 |
MS.gene059458 | MS.gene065446 | 0.809739 | 1.63E-50 | -1.69E-46 |
MS.gene05954 | MS.gene065446 | 0.813802 | 2.13E-51 | -1.69E-46 |
MS.gene059584 | MS.gene065446 | 0.826804 | 2.22E-54 | -1.69E-46 |
MS.gene059625 | MS.gene065446 | 0.810466 | 1.14E-50 | -1.69E-46 |
MS.gene060365 | MS.gene065446 | 0.801749 | 7.77E-49 | -1.69E-46 |
MS.gene060521 | MS.gene065446 | 0.832985 | 6.91E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065446.t1 | MTR_4g010120 | 94.595 | 74 | 4 | 0 | 121 | 194 | 193 | 266 | 1.60e-40 | 144 |
MS.gene065446.t1 | MTR_5g004830 | 40.268 | 149 | 78 | 3 | 198 | 343 | 2 | 142 | 1.26e-31 | 117 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065446.t1 | AT3G15830 | 57.426 | 101 | 30 | 2 | 112 | 199 | 189 | 289 | 3.31e-27 | 109 |
MS.gene065446.t1 | AT3G15820 | 77.273 | 66 | 15 | 0 | 121 | 186 | 215 | 280 | 5.72e-26 | 106 |
Find 77 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTTCAAACTCGCAGTTATA+CGG | 0.304728 | 8.1:-23872452 | None:intergenic |
TGGGAGGTGCTGATTCATTC+TGG | 0.307310 | 8.1:+23870935 | MS.gene065446:CDS |
CTTCTCTGCATCAACCTTAC+TGG | 0.321088 | 8.1:-23870792 | None:intergenic |
AAGAAGTATCTTTCCTTTGA+AGG | 0.324785 | 8.1:-23865794 | None:intergenic |
TTCAGGTCATGTGGCGGGTT+CGG | 0.347386 | 8.1:+23867970 | MS.gene065446:intron |
TCTGCAACAATTTCCACCTT+TGG | 0.363925 | 8.1:-23865993 | None:intergenic |
AGGCTGTTACACTATTGATT+TGG | 0.367835 | 8.1:+23868093 | MS.gene065446:CDS |
ATTGATTTGGCTGTTGGGTT+AGG | 0.379250 | 8.1:+23868106 | MS.gene065446:CDS |
TACACTATTGATTTGGCTGT+TGG | 0.386529 | 8.1:+23868100 | MS.gene065446:CDS |
GTTTAAGATGGACAGTAATC+CGG | 0.386700 | 8.1:+23871284 | MS.gene065446:CDS |
GAGGATGAAGAGATGGGATA+TGG | 0.390384 | 8.1:+23868015 | MS.gene065446:CDS |
TTGGCTGTTGGGTTAGGTGC+TGG | 0.405118 | 8.1:+23868112 | MS.gene065446:CDS |
TATATATTTGACTCTTTAGC+TGG | 0.413885 | 8.1:+23868136 | MS.gene065446:CDS |
TACATTTGTTGAAGCGAGTA+AGG | 0.420870 | 8.1:+23871239 | MS.gene065446:CDS |
ACACTATTGATTTGGCTGTT+GGG | 0.424065 | 8.1:+23868101 | MS.gene065446:CDS |
TTCAGTTGAAGGAGATTATC+CGG | 0.451371 | 8.1:+23865893 | MS.gene065446:CDS |
AGACATGGAGGAACCGGTAT+TGG | 0.457153 | 8.1:-23870893 | None:intergenic |
TGAATGTTCGAACAAATTCA+TGG | 0.458298 | 8.1:+23870915 | MS.gene065446:CDS |
CGAATTCCATTCCACATCAA+TGG | 0.458515 | 8.1:+23871075 | MS.gene065446:CDS |
GCAGGTTCTACATCAATTTG+AGG | 0.461169 | 8.1:-23870854 | None:intergenic |
TGACAGATTGTTGTTTAAGA+TGG | 0.463808 | 8.1:+23871272 | MS.gene065446:CDS |
ACATTCAGACATGGAGGAAC+CGG | 0.479236 | 8.1:-23870899 | None:intergenic |
AATGTCAGAGTCTCTTTCCC+AGG | 0.481300 | 8.1:-23871111 | None:intergenic |
ACATGAGGAGGATGAAGAGA+TGG | 0.487329 | 8.1:+23868008 | MS.gene065446:CDS |
GGAAATTGTTGCAGATAATG+AGG | 0.493697 | 8.1:+23866001 | MS.gene065446:CDS |
GGGTTCGGTGATAGCTTCAT+TGG | 0.496149 | 8.1:+23867985 | MS.gene065446:CDS |
TTTAAGATGGACAGTAATCC+GGG | 0.497303 | 8.1:+23871285 | MS.gene065446:CDS |
CTGCAAGCTGTAAGATTGCT+TGG | 0.506831 | 8.1:+23868064 | MS.gene065446:CDS |
AAAGATCCATTGATGTGGAA+TGG | 0.510519 | 8.1:-23871081 | None:intergenic |
TATGTGCAGAAGAAATTCAT+AGG | 0.511115 | 8.1:+23871204 | MS.gene065446:CDS |
CATGAGGAGGATGAAGAGAT+GGG | 0.511288 | 8.1:+23868009 | MS.gene065446:CDS |
TTCGACGGTGTTGCCTCCAC+CGG | 0.514992 | 8.1:-23872426 | None:intergenic |
ATGCAATATTCGAATGAAGA+AGG | 0.515264 | 8.1:+23870815 | MS.gene065446:CDS |
GGATCAAGTTGGCTTTATGT+TGG | 0.518196 | 8.1:-23865749 | None:intergenic |
GGCTCACGGTAATCATCTGC+AGG | 0.521858 | 8.1:-23870872 | None:intergenic |
AAGATGCAGTTGATGCGATC+TGG | 0.525388 | 8.1:+23871154 | MS.gene065446:CDS |
TGCAGAAGAAATTCATAGGA+AGG | 0.530136 | 8.1:+23871208 | MS.gene065446:CDS |
TAGATTACCAGCTTATGAGT+TGG | 0.531267 | 8.1:-23870968 | None:intergenic |
GTAATCAATAACGCCGGTGG+AGG | 0.535659 | 8.1:+23872413 | MS.gene065446:CDS |
TTGTAGCTCTGTTATGAGAA+TGG | 0.536769 | 8.1:+23870667 | MS.gene065446:CDS |
ATCAGAATAGTCGCCTTCAA+AGG | 0.545703 | 8.1:+23865781 | MS.gene065446:CDS |
TTCTTCTGCACATAATCACC+AGG | 0.548008 | 8.1:-23871195 | None:intergenic |
TTTACGTCCAACTCATAAGC+TGG | 0.553121 | 8.1:+23870961 | MS.gene065446:CDS |
CAGAAGAAATTCATAGGAAG+GGG | 0.562018 | 8.1:+23871210 | MS.gene065446:CDS |
GTTGAAGGAGATTATCCGGT+AGG | 0.564443 | 8.1:+23865897 | MS.gene065446:CDS |
TGATTACCGTGAGCCAATAC+CGG | 0.564459 | 8.1:+23870880 | MS.gene065446:CDS |
TGAAGAGATGGGATATGGCA+TGG | 0.565513 | 8.1:+23868020 | MS.gene065446:CDS |
ATTCGTAAATGTTCCAAAGG+TGG | 0.573804 | 8.1:+23865980 | MS.gene065446:CDS |
AATCCTAACTCAAAACCTAC+CGG | 0.574030 | 8.1:-23865912 | None:intergenic |
AGAAATTCATAGGAAGGGGT+TGG | 0.574152 | 8.1:+23871214 | MS.gene065446:CDS |
TGAATTCGTAAATGTTCCAA+AGG | 0.576188 | 8.1:+23865977 | MS.gene065446:CDS |
GAAGCGAGTAAGGTGAAAGT+TGG | 0.578483 | 8.1:+23871249 | MS.gene065446:CDS |
GAAATTGTTGCAGATAATGA+GGG | 0.578908 | 8.1:+23866002 | MS.gene065446:CDS |
GCAGAAGAAATTCATAGGAA+GGG | 0.580030 | 8.1:+23871209 | MS.gene065446:CDS |
GTAAGATTGCTTGGTACAAG+AGG | 0.580563 | 8.1:+23868073 | MS.gene065446:CDS |
GAATGTTCGAACAAATTCAT+GGG | 0.580892 | 8.1:+23870916 | MS.gene065446:CDS |
AGAGACTCTGACATTGACAT+TGG | 0.584037 | 8.1:+23871119 | MS.gene065446:CDS |
TTACTGCAGTGAGTCCAGTA+AGG | 0.589344 | 8.1:+23870778 | MS.gene065446:intron |
GACTATTCTGATAATCCCAC+AGG | 0.594801 | 8.1:-23865770 | None:intergenic |
CACGAAAAGATCCATTGATG+TGG | 0.608405 | 8.1:-23871086 | None:intergenic |
CTTAGAAATGCAGATATGAG+AGG | 0.609883 | 8.1:+23865849 | MS.gene065446:CDS |
TTTGTTCGAACATTCAGACA+TGG | 0.613761 | 8.1:-23870908 | None:intergenic |
ATAATCCCACAGGATCAAGT+TGG | 0.619625 | 8.1:-23865760 | None:intergenic |
TGATAGCTTCATTGGACATG+AGG | 0.619875 | 8.1:+23867993 | MS.gene065446:CDS |
ATAAAGCCAACTTGATCCTG+TGG | 0.621117 | 8.1:+23865754 | MS.gene065446:CDS |
TGAGAATGGCAACATTGAAG+AGG | 0.623240 | 8.1:+23870681 | MS.gene065446:CDS |
GAGGAACCGGTATTGGCTCA+CGG | 0.632876 | 8.1:-23870886 | None:intergenic |
TAAAGCCAACTTGATCCTGT+GGG | 0.643722 | 8.1:+23865755 | MS.gene065446:CDS |
CAATATTCGAATGAAGAAGG+AGG | 0.651295 | 8.1:+23870818 | MS.gene065446:CDS |
ATTGTAATCAATAACGCCGG+TGG | 0.653478 | 8.1:+23872410 | MS.gene065446:CDS |
TGTGATATTGATGTTGAACC+TGG | 0.654348 | 8.1:+23871177 | MS.gene065446:CDS |
TAGCTTCATTGGACATGAGG+AGG | 0.656474 | 8.1:+23867996 | MS.gene065446:CDS |
GCAGTTATACGGTGGTTCGA+CGG | 0.660300 | 8.1:-23872441 | None:intergenic |
GTTCGAACATTCAGACATGG+AGG | 0.688432 | 8.1:-23870905 | None:intergenic |
TGTTCGAACAAATTCATGGG+AGG | 0.689256 | 8.1:+23870919 | MS.gene065446:CDS |
GCAATTGTAATCAATAACGC+CGG | 0.690508 | 8.1:+23872407 | MS.gene065446:CDS |
TCAAACTCGCAGTTATACGG+TGG | 0.708422 | 8.1:-23872449 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTATTTATTTATTTATTT+AGG | + | chr8.1:23866042-23866061 | MS.gene065446:intron | 0.0% |
!! | TTTATTATTTAATAAATTTA+AGG | - | chr8.1:23869400-23869419 | None:intergenic | 0.0% |
!!! | AATTTTATATATAATAAATA+AGG | + | chr8.1:23871554-23871573 | MS.gene065446:intron | 0.0% |
!! | ATTATTATCTTTATGTAAAT+TGG | - | chr8.1:23866368-23866387 | None:intergenic | 10.0% |
!! | TTACATAAAGATAATAATAA+TGG | + | chr8.1:23866370-23866389 | MS.gene065446:intron | 10.0% |
!!! | ATTTTTATTTCAAACAAATA+TGG | - | chr8.1:23869524-23869543 | None:intergenic | 10.0% |
!!! | TATTTTCATCTTTTAAAATA+AGG | - | chr8.1:23872220-23872239 | None:intergenic | 10.0% |
!! | AAACTTGACAATTAATATAT+TGG | + | chr8.1:23870186-23870205 | MS.gene065446:intron | 15.0% |
!! | AACAAACTATATTATTATAG+AGG | - | chr8.1:23869806-23869825 | None:intergenic | 15.0% |
!! | AATGTTTATTAAAAATTGAG+TGG | - | chr8.1:23866570-23866589 | None:intergenic | 15.0% |
!! | AATTAGAAATTCAATTAGTT+TGG | + | chr8.1:23868760-23868779 | MS.gene065446:intron | 15.0% |
!! | ACAAACTATATTATTATAGA+GGG | - | chr8.1:23869805-23869824 | None:intergenic | 15.0% |
!! | ACTTTATGGTATAATTAAAA+AGG | + | chr8.1:23870308-23870327 | MS.gene065446:intron | 15.0% |
!! | ATAAAACTAACATAAAGTAA+GGG | - | chr8.1:23871002-23871021 | None:intergenic | 15.0% |
!! | ATTGAAAAAATATGATTGAA+AGG | - | chr8.1:23869897-23869916 | None:intergenic | 15.0% |
!! | ATTTGAATTCAATTAACATT+GGG | + | chr8.1:23867774-23867793 | MS.gene065446:intron | 15.0% |
!! | CATTTCTGTAAATAAAAAAA+AGG | - | chr8.1:23866100-23866119 | None:intergenic | 15.0% |
!! | TAGTTTAAATTGTTAAAGAA+AGG | + | chr8.1:23870402-23870421 | MS.gene065446:intron | 15.0% |
!! | TATAAAACTAACATAAAGTA+AGG | - | chr8.1:23871003-23871022 | None:intergenic | 15.0% |
!! | TTAAAAGATGAAAATAGAAA+GGG | + | chr8.1:23872224-23872243 | MS.gene065446:intron | 15.0% |
!! | TTTAAAAGATGAAAATAGAA+AGG | + | chr8.1:23872223-23872242 | MS.gene065446:intron | 15.0% |
!!! | AAAAGCTAAAAAAATGTTTT+TGG | + | chr8.1:23871815-23871834 | MS.gene065446:intron | 15.0% |
!!! | AAAGTTGATTATTAATGAAA+TGG | + | chr8.1:23871623-23871642 | MS.gene065446:intron | 15.0% |
!!! | ATCTCAAATTTTTTTAAAGA+CGG | + | chr8.1:23869423-23869442 | MS.gene065446:intron | 15.0% |
!!! | ATTAGTTTGGAAATTTTTTA+AGG | + | chr8.1:23868773-23868792 | MS.gene065446:intron | 15.0% |
!!! | ATTTATTTTTGTACAAGAAA+TGG | + | chr8.1:23869039-23869058 | MS.gene065446:intron | 15.0% |
!!! | GGATTATTGATTAAATTTAA+CGG | - | chr8.1:23869503-23869522 | None:intergenic | 15.0% |
!!! | TATTTTAAACTTTGTAGTAA+TGG | + | chr8.1:23871456-23871475 | MS.gene065446:intron | 15.0% |
!!! | TTTTCTAATTTATTAATTCC+AGG | - | chr8.1:23872018-23872037 | None:intergenic | 15.0% |
!!! | TTTTTTATTTACAGAAATGA+AGG | + | chr8.1:23866101-23866120 | MS.gene065446:intron | 15.0% |
!! | AAAATGGGTAATAATTAAAG+AGG | + | chr8.1:23870279-23870298 | MS.gene065446:intron | 20.0% |
!! | AAAATTATTGAAATGGAAAG+AGG | + | chr8.1:23870372-23870391 | MS.gene065446:intron | 20.0% |
!! | AAAGAGAAATGTAATATATC+AGG | + | chr8.1:23869075-23869094 | MS.gene065446:intron | 20.0% |
!! | AAATTATTGAAATGGAAAGA+GGG | + | chr8.1:23870373-23870392 | MS.gene065446:intron | 20.0% |
!! | AAGCAAATAATAAAAAAGAG+AGG | + | chr8.1:23868454-23868473 | MS.gene065446:intron | 20.0% |
!! | AATAAAAAAAAGGAATCATG+AGG | - | chr8.1:23866090-23866109 | None:intergenic | 20.0% |
!! | AATGCAAACGATTTATATTA+TGG | + | chr8.1:23867173-23867192 | MS.gene065446:intron | 20.0% |
!! | ACGAAAAGACTTAAATATAT+AGG | + | chr8.1:23871686-23871705 | MS.gene065446:intron | 20.0% |
!! | ATATAAACATTTAAAGACAG+TGG | - | chr8.1:23869753-23869772 | None:intergenic | 20.0% |
!! | ATTAACAAAACAAAAACACA+AGG | - | chr8.1:23867882-23867901 | None:intergenic | 20.0% |
!! | ATTGTTAAAGAAAGGTAAAA+AGG | + | chr8.1:23870410-23870429 | MS.gene065446:intron | 20.0% |
!! | GAAAATAGTAATATATGAGT+TGG | + | chr8.1:23870478-23870497 | MS.gene065446:intron | 20.0% |
!! | GATTTGAATTCAATTAACAT+TGG | + | chr8.1:23867773-23867792 | MS.gene065446:intron | 20.0% |
!! | TAAAAGATGAAAATAGAAAG+GGG | + | chr8.1:23872225-23872244 | MS.gene065446:intron | 20.0% |
!! | TAAAGAGGTAATAAACTTTA+TGG | + | chr8.1:23870294-23870313 | MS.gene065446:intron | 20.0% |
!! | TAATTGCTATGTTAAATTTC+TGG | + | chr8.1:23871308-23871327 | MS.gene065446:intron | 20.0% |
!! | TATATAAGTTGCTATGTATT+AGG | + | chr8.1:23870631-23870650 | MS.gene065446:intron | 20.0% |
!! | TATTATGAATAAGAATAGCA+TGG | + | chr8.1:23871578-23871597 | MS.gene065446:intron | 20.0% |
!! | TTGATTATTAATGAAATGGT+TGG | + | chr8.1:23871627-23871646 | MS.gene065446:intron | 20.0% |
!! | TTGTTAAAGAAAGGTAAAAA+GGG | + | chr8.1:23870411-23870430 | MS.gene065446:intron | 20.0% |
!! | TTTGAATTCAATTAACATTG+GGG | + | chr8.1:23867775-23867794 | MS.gene065446:intron | 20.0% |
!!! | AAAAAATGAAGCATTTTCTT+TGG | - | chr8.1:23867341-23867360 | None:intergenic | 20.0% |
!!! | AAAATTTATGTTTTGTGTGT+AGG | + | chr8.1:23866946-23866965 | MS.gene065446:intron | 20.0% |
!!! | AATTAAGTTGCATTAAGATT+TGG | - | chr8.1:23869154-23869173 | None:intergenic | 20.0% |
!!! | AGAGTTGAAATTATTGTTTT+AGG | - | chr8.1:23867220-23867239 | None:intergenic | 20.0% |
!!! | ATAGAAGTGATTCTAAAAAA+TGG | + | chr8.1:23867491-23867510 | MS.gene065446:intron | 20.0% |
!!! | CACTTTAAAAATCACATTTA+GGG | - | chr8.1:23867686-23867705 | None:intergenic | 20.0% |
!!! | TCACTTTAAAAATCACATTT+AGG | - | chr8.1:23867687-23867706 | None:intergenic | 20.0% |
!!! | TGTTTTGTTAATGTTGAATA+GGG | + | chr8.1:23867890-23867909 | MS.gene065446:intron | 20.0% |
!!! | TTAATATATTGGTTCTATGT+AGG | + | chr8.1:23870197-23870216 | MS.gene065446:intron | 20.0% |
!!! | TTGTTTTGTTAATGTTGAAT+AGG | + | chr8.1:23867889-23867908 | MS.gene065446:intron | 20.0% |
!!! | TTTACCTGAATTGATTTTTT+TGG | + | chr8.1:23866877-23866896 | MS.gene065446:intron | 20.0% |
!!! | TTTCTCTCAAATGATTTTTT+TGG | + | chr8.1:23867071-23867090 | MS.gene065446:intron | 20.0% |
! | AAAAAGAATAAGAAGATGAG+AGG | - | chr8.1:23872323-23872342 | None:intergenic | 25.0% |
! | AAAAGATGAAAATAGAAAGG+GGG | + | chr8.1:23872226-23872245 | MS.gene065446:intron | 25.0% |
! | AAAAGGGAAACATACAAATA+AGG | + | chr8.1:23868262-23868281 | MS.gene065446:intron | 25.0% |
! | AAACGATTTATATTATGGAC+TGG | + | chr8.1:23867178-23867197 | MS.gene065446:intron | 25.0% |
! | AAATGATATCTGCAATTTGT+GGG | - | chr8.1:23866313-23866332 | None:intergenic | 25.0% |
! | AAATTTAACGGTAAGTTTAG+TGG | - | chr8.1:23869491-23869510 | None:intergenic | 25.0% |
! | AACAAGAAAAAGACAATGTT+TGG | + | chr8.1:23868886-23868905 | MS.gene065446:intron | 25.0% |
! | AACTATATTATTATAGAGGG+TGG | - | chr8.1:23869802-23869821 | None:intergenic | 25.0% |
! | AAGACTTAAATATATAGGAG+TGG | + | chr8.1:23871691-23871710 | MS.gene065446:intron | 25.0% |
! | AAGGTAAAAAGGGAAAAATA+AGG | + | chr8.1:23870421-23870440 | MS.gene065446:intron | 25.0% |
! | AATGCCAAAAAAATCAATTC+AGG | - | chr8.1:23866884-23866903 | None:intergenic | 25.0% |
! | AATTTAACATAGCAATTACC+CGG | - | chr8.1:23871306-23871325 | None:intergenic | 25.0% |
! | ACCTGTAAATATAGTGAATT+TGG | + | chr8.1:23871839-23871858 | MS.gene065446:intron | 25.0% |
! | AGATACATTCACATAAAAGT+GGG | - | chr8.1:23866821-23866840 | None:intergenic | 25.0% |
! | AGTATCAAGTCAACATAAAA+TGG | - | chr8.1:23870749-23870768 | None:intergenic | 25.0% |
! | AGTTCATACTCTATATCATA+TGG | + | chr8.1:23868645-23868664 | MS.gene065446:intron | 25.0% |
! | ATAATCTTGATATCAAGTGA+TGG | + | chr8.1:23866203-23866222 | MS.gene065446:intron | 25.0% |
! | ATTAAAAATTGAGTGGTAGT+GGG | - | chr8.1:23866563-23866582 | None:intergenic | 25.0% |
! | CCTGTAAATATAGTGAATTT+GGG | + | chr8.1:23871840-23871859 | MS.gene065446:intron | 25.0% |
! | GTATTAAGTACTAAAAGATC+AGG | + | chr8.1:23871406-23871425 | MS.gene065446:intron | 25.0% |
! | GTTGAATAATATAGCAAAAG+TGG | + | chr8.1:23870452-23870471 | MS.gene065446:intron | 25.0% |
! | TACAGGAAGAAGAATAATAA+TGG | - | chr8.1:23872274-23872293 | None:intergenic | 25.0% |
! | TAGATACATTCACATAAAAG+TGG | - | chr8.1:23866822-23866841 | None:intergenic | 25.0% |
! | TATATATTTGACTCTTTAGC+TGG | + | chr8.1:23868136-23868155 | MS.gene065446:CDS | 25.0% |
! | TATTAAAAATTGAGTGGTAG+TGG | - | chr8.1:23866564-23866583 | None:intergenic | 25.0% |
! | TGAAGAGGTAATAAAGTTTA+TGG | + | chr8.1:23870696-23870715 | MS.gene065446:intron | 25.0% |
! | TGATATATAAAACTGGTAAG+TGG | + | chr8.1:23871335-23871354 | MS.gene065446:intron | 25.0% |
! | TGGAAAGTGATATATAAAAC+TGG | + | chr8.1:23871328-23871347 | MS.gene065446:intron | 25.0% |
! | TTACAATGACATTCATTGAT+AGG | - | chr8.1:23869278-23869297 | None:intergenic | 25.0% |
! | TTTAACATGAAATCGAAGTT+TGG | + | chr8.1:23867652-23867671 | MS.gene065446:intron | 25.0% |
!! | AAAATTTGTGTTTTGTGTGT+AGG | + | chr8.1:23867140-23867159 | MS.gene065446:intron | 25.0% |
!! | AATGTTGAATAGGGATTTTT+GGG | + | chr8.1:23867899-23867918 | MS.gene065446:intron | 25.0% |
!! | AATTCAAACCCACAATATTT+TGG | - | chr8.1:23868713-23868732 | None:intergenic | 25.0% |
!! | AGATATCATTTGGAATGTTA+AGG | + | chr8.1:23866322-23866341 | MS.gene065446:intron | 25.0% |
!! | ATTTGGTTTCATGAACAATT+TGG | + | chr8.1:23868229-23868248 | MS.gene065446:intron | 25.0% |
!! | CTAAACCAATTTGAAACTTA+AGG | - | chr8.1:23870535-23870554 | None:intergenic | 25.0% |
!! | CTGAAAAAATTTTCAGTTGA+AGG | + | chr8.1:23865882-23865901 | MS.gene065446:CDS | 25.0% |
!! | GAATTCAAACATAGTTCTTT+TGG | - | chr8.1:23867548-23867567 | None:intergenic | 25.0% |
!! | GTTGGTTCAAAAATTGATTT+AGG | + | chr8.1:23866153-23866172 | MS.gene065446:CDS | 25.0% |
!! | TAATGTTGAATAGGGATTTT+TGG | + | chr8.1:23867898-23867917 | MS.gene065446:intron | 25.0% |
!! | TTATTTGTATGTTTCCCTTT+TGG | - | chr8.1:23868263-23868282 | None:intergenic | 25.0% |
!! | TTTGGTTTCATGAACAATTT+GGG | + | chr8.1:23868230-23868249 | MS.gene065446:intron | 25.0% |
!! | TTTTGATAAGTCAGTTACTT+GGG | - | chr8.1:23866414-23866433 | None:intergenic | 25.0% |
!!! | AAAATTTGAGTTTTGTGTGT+AGG | + | chr8.1:23866752-23866771 | MS.gene065446:intron | 25.0% |
!!! | AAACATGCATTTAGTTCTAT+TGG | - | chr8.1:23867452-23867471 | None:intergenic | 25.0% |
!!! | TCATTTTTCCTGTTTTTTTC+AGG | + | chr8.1:23867953-23867972 | MS.gene065446:intron | 25.0% |
!!! | TTGATGATTCAACACATTTT+CGG | + | chr8.1:23871946-23871965 | MS.gene065446:intron | 25.0% |
!!! | TTGTTTTTTAAAATAGCCTC+TGG | + | chr8.1:23871913-23871932 | MS.gene065446:intron | 25.0% |
!!! | TTTCTTGTTTCTTTTGTTTC+TGG | - | chr8.1:23868875-23868894 | None:intergenic | 25.0% |
AAAAATGATACATTCCCAAC+TGG | - | chr8.1:23867941-23867960 | None:intergenic | 30.0% | |
AACCCAACGATTAATATAGA+TGG | + | chr8.1:23869344-23869363 | MS.gene065446:intron | 30.0% | |
AATGTGTGTTATGTTTGGAT+GGG | + | chr8.1:23868302-23868321 | MS.gene065446:intron | 30.0% | |
AATGTTAAGGAGTTTATGTG+GGG | + | chr8.1:23866335-23866354 | MS.gene065446:intron | 30.0% | |
ACAAAAGAAATAACATCCCT+AGG | - | chr8.1:23869007-23869026 | None:intergenic | 30.0% | |
ACTAGAAGCTTACAATGAAA+GGG | + | chr8.1:23867598-23867617 | MS.gene065446:intron | 30.0% | |
AGCTAAAAGTTAGTATCATG+TGG | + | chr8.1:23868189-23868208 | MS.gene065446:intron | 30.0% | |
AGGAGAAATTTCACTAAAAG+TGG | - | chr8.1:23869877-23869896 | None:intergenic | 30.0% | |
ATGCAATATTCGAATGAAGA+AGG | + | chr8.1:23870815-23870834 | MS.gene065446:CDS | 30.0% | |
CAAATGATATCTGCAATTTG+TGG | - | chr8.1:23866314-23866333 | None:intergenic | 30.0% | |
CACAAATTGCAGATATCATT+TGG | + | chr8.1:23866312-23866331 | MS.gene065446:intron | 30.0% | |
CACCATCTATATTAATCGTT+GGG | - | chr8.1:23869349-23869368 | None:intergenic | 30.0% | |
CATTGTAAGCTTCTAGTAAT+GGG | - | chr8.1:23867595-23867614 | None:intergenic | 30.0% | |
CCCAAATTCACTATATTTAC+AGG | - | chr8.1:23871843-23871862 | None:intergenic | 30.0% | |
GAAATTGTTGCAGATAATGA+GGG | + | chr8.1:23866002-23866021 | MS.gene065446:CDS | 30.0% | |
GAATGTTAAGGAGTTTATGT+GGG | + | chr8.1:23866334-23866353 | MS.gene065446:intron | 30.0% | |
GAATGTTCGAACAAATTCAT+GGG | + | chr8.1:23870916-23870935 | MS.gene065446:CDS | 30.0% | |
GATGGTGAAAATTGTAAAGA+TGG | + | chr8.1:23869362-23869381 | MS.gene065446:intron | 30.0% | |
GTAAAAAGGGAAAAATAAGG+AGG | + | chr8.1:23870424-23870443 | MS.gene065446:intron | 30.0% | |
TAAATAAAGTCAAGAGAGCA+TGG | - | chr8.1:23869728-23869747 | None:intergenic | 30.0% | |
TACTAGAAGCTTACAATGAA+AGG | + | chr8.1:23867597-23867616 | MS.gene065446:intron | 30.0% | |
TAGTTGATCTGTTTCATTGT+TGG | + | chr8.1:23869245-23869264 | MS.gene065446:intron | 30.0% | |
TATGTGCAGAAGAAATTCAT+AGG | + | chr8.1:23871204-23871223 | MS.gene065446:CDS | 30.0% | |
TCACCATCTATATTAATCGT+TGG | - | chr8.1:23869350-23869369 | None:intergenic | 30.0% | |
TCATGAAACCAAATCATGTT+TGG | - | chr8.1:23868223-23868242 | None:intergenic | 30.0% | |
TCATGTTTGGATTCTAACAT+CGG | - | chr8.1:23868410-23868429 | None:intergenic | 30.0% | |
TCATTCATCCAAACATGATT+TGG | + | chr8.1:23868212-23868231 | MS.gene065446:intron | 30.0% | |
TCATTGTAAGCTTCTAGTAA+TGG | - | chr8.1:23867596-23867615 | None:intergenic | 30.0% | |
TGAAGACTCCAAAATATTGT+GGG | + | chr8.1:23868702-23868721 | MS.gene065446:intron | 30.0% | |
TGAATGTAATGTTGATCTCT+AGG | + | chr8.1:23869976-23869995 | MS.gene065446:intron | 30.0% | |
TGAATGTTCGAACAAATTCA+TGG | + | chr8.1:23870915-23870934 | MS.gene065446:CDS | 30.0% | |
TGAATTCGTAAATGTTCCAA+AGG | + | chr8.1:23865977-23865996 | MS.gene065446:CDS | 30.0% | |
TGACTAATTCGCCAAAATAT+TGG | + | chr8.1:23869847-23869866 | MS.gene065446:intron | 30.0% | |
TTGAAGACTCCAAAATATTG+TGG | + | chr8.1:23868701-23868720 | MS.gene065446:intron | 30.0% | |
TTTCTTCTTATTCACAATCC+TGG | + | chr8.1:23872340-23872359 | MS.gene065446:intron | 30.0% | |
! | ACTTCTTTTAGCGCTAAAAT+AGG | + | chr8.1:23865810-23865829 | MS.gene065446:CDS | 30.0% |
! | CAAACATAGTTCTTTTGGAT+TGG | - | chr8.1:23867543-23867562 | None:intergenic | 30.0% |
! | CTTTTGATAAGTCAGTTACT+TGG | - | chr8.1:23866415-23866434 | None:intergenic | 30.0% |
! | GATACTGAGAACTTGTTTAA+AGG | + | chr8.1:23869930-23869949 | MS.gene065446:intron | 30.0% |
! | TTTTCATGTTTACATGTCGT+GGG | + | chr8.1:23867239-23867258 | MS.gene065446:intron | 30.0% |
!! | AAGAAGTATCTTTCCTTTGA+AGG | - | chr8.1:23865797-23865816 | None:intergenic | 30.0% |
!! | AATATAGTGAATTTGGGTTG+TGG | + | chr8.1:23871846-23871865 | MS.gene065446:intron | 30.0% |
!! | ACGACAATATGTGTTTTGTT+TGG | + | chr8.1:23866843-23866862 | MS.gene065446:intron | 30.0% |
!! | ATAAGGTTGATGACATGTTT+AGG | - | chr8.1:23868817-23868836 | None:intergenic | 30.0% |
!! | GTCTGCATTTCATTTTGTTT+TGG | + | chr8.1:23868585-23868604 | MS.gene065446:intron | 30.0% |
!! | TAAGGTTGATGACATGTTTA+GGG | - | chr8.1:23868816-23868835 | None:intergenic | 30.0% |
!! | TGAAATTTGTTAGCCCTTTA+CGG | - | chr8.1:23869107-23869126 | None:intergenic | 30.0% |
!! | TGACAGATTGTTGTTTAAGA+TGG | + | chr8.1:23871272-23871291 | MS.gene065446:CDS | 30.0% |
!! | TGCATTTAGTTCTATTGGAT+TGG | - | chr8.1:23867447-23867466 | None:intergenic | 30.0% |
!! | TTATGGACTGGTTTAATTGA+TGG | + | chr8.1:23867190-23867209 | MS.gene065446:intron | 30.0% |
!!! | GTTTTGTTTGCAATGTTAGT+TGG | + | chr8.1:23866919-23866938 | MS.gene065446:intron | 30.0% |
!!! | GTTTTGTTTGCATTGTTAGT+TGG | + | chr8.1:23867113-23867132 | MS.gene065446:intron | 30.0% |
AAAAGGGAAAAATAAGGAGG+TGG | + | chr8.1:23870427-23870446 | MS.gene065446:intron | 35.0% | |
AAAAGTTGCTCATGGAGTTA+AGG | - | chr8.1:23870069-23870088 | None:intergenic | 35.0% | |
AAAATAATCATCCCCTGATG+AGG | + | chr8.1:23866485-23866504 | MS.gene065446:intron | 35.0% | |
AAAGATCCATTGATGTGGAA+TGG | - | chr8.1:23871084-23871103 | None:intergenic | 35.0% | |
AAAGGGAAAAATAAGGAGGT+GGG | + | chr8.1:23870428-23870447 | MS.gene065446:intron | 35.0% | |
AAAGGGGGAGATTAAAAATG+AGG | + | chr8.1:23872241-23872260 | MS.gene065446:intron | 35.0% | |
AACCAATCAAGATTGTGTTG+TGG | + | chr8.1:23872370-23872389 | MS.gene065446:intron | 35.0% | |
AAGAAGGTTGGAGAAGTTTA+AGG | - | chr8.1:23868926-23868945 | None:intergenic | 35.0% | |
AAGGGGGAGATTAAAAATGA+GGG | + | chr8.1:23872242-23872261 | MS.gene065446:intron | 35.0% | |
AATCCTAACTCAAAACCTAC+CGG | - | chr8.1:23865915-23865934 | None:intergenic | 35.0% | |
ACTTCAAACTCGCAGTTATA+CGG | - | chr8.1:23872455-23872474 | None:intergenic | 35.0% | |
AGAAAATAACACCTCATCAG+GGG | - | chr8.1:23866499-23866518 | None:intergenic | 35.0% | |
AGAAGTTTAAGGAAGGTTCA+AGG | - | chr8.1:23868915-23868934 | None:intergenic | 35.0% | |
AGAGAAAATAACACCTCATC+AGG | - | chr8.1:23866501-23866520 | None:intergenic | 35.0% | |
ATATCAGGATCATACCGTAA+AGG | + | chr8.1:23869090-23869109 | MS.gene065446:intron | 35.0% | |
ATCCTAAACTATCTTGACCT+AGG | + | chr8.1:23868987-23869006 | MS.gene065446:intron | 35.0% | |
ATTATATTGACGTCAGTGAC+GGG | - | chr8.1:23866188-23866207 | None:intergenic | 35.0% | |
ATTCGTAAATGTTCCAAAGG+TGG | + | chr8.1:23865980-23865999 | MS.gene065446:CDS | 35.0% | |
CAATATTCGAATGAAGAAGG+AGG | + | chr8.1:23870818-23870837 | MS.gene065446:CDS | 35.0% | |
CAATGTGTGTTATGTTTGGA+TGG | + | chr8.1:23868301-23868320 | MS.gene065446:intron | 35.0% | |
CAGAAGAAATTCATAGGAAG+GGG | + | chr8.1:23871210-23871229 | MS.gene065446:CDS | 35.0% | |
CAGACAATGTGTGTTATGTT+TGG | + | chr8.1:23868297-23868316 | MS.gene065446:intron | 35.0% | |
CCACTCATAAAGAAAAGAGA+TGG | + | chr8.1:23871777-23871796 | MS.gene065446:intron | 35.0% | |
CTAATTCGCCAAAATATTGG+AGG | + | chr8.1:23869850-23869869 | MS.gene065446:intron | 35.0% | |
CTAGAAGCTTACAATGAAAG+GGG | + | chr8.1:23867599-23867618 | MS.gene065446:intron | 35.0% | |
CTTAGAAATGCAGATATGAG+AGG | + | chr8.1:23865849-23865868 | MS.gene065446:CDS | 35.0% | |
GAGAAAATAACACCTCATCA+GGG | - | chr8.1:23866500-23866519 | None:intergenic | 35.0% | |
GATGTTAGAATCCAAACATG+AGG | + | chr8.1:23868409-23868428 | MS.gene065446:intron | 35.0% | |
GATTATATTGACGTCAGTGA+CGG | - | chr8.1:23866189-23866208 | None:intergenic | 35.0% | |
GATTGTACAAAACTGTCAAG+TGG | + | chr8.1:23872123-23872142 | MS.gene065446:intron | 35.0% | |
GCAAGCCTTAAGTTTCAAAT+TGG | + | chr8.1:23870527-23870546 | MS.gene065446:intron | 35.0% | |
GCAATTGTAATCAATAACGC+CGG | + | chr8.1:23872407-23872426 | MS.gene065446:CDS | 35.0% | |
GCAGAAGAAATTCATAGGAA+GGG | + | chr8.1:23871209-23871228 | MS.gene065446:CDS | 35.0% | |
GGAAATTGTTGCAGATAATG+AGG | + | chr8.1:23866001-23866020 | MS.gene065446:CDS | 35.0% | |
GGAATGTTAAGGAGTTTATG+TGG | + | chr8.1:23866333-23866352 | MS.gene065446:intron | 35.0% | |
GTCTCTCAAATTAGTGACAT+AGG | - | chr8.1:23867731-23867750 | None:intergenic | 35.0% | |
TAACCTCCAAAATTGCTCTT+AGG | - | chr8.1:23867418-23867437 | None:intergenic | 35.0% | |
TAGAATCCAAACATGAGGAA+GGG | + | chr8.1:23868414-23868433 | MS.gene065446:intron | 35.0% | |
TAGATTACCAGCTTATGAGT+TGG | - | chr8.1:23870971-23870990 | None:intergenic | 35.0% | |
TATCAGGATCATACCGTAAA+GGG | + | chr8.1:23869091-23869110 | MS.gene065446:intron | 35.0% | |
TCCTAAACTATCTTGACCTA+GGG | + | chr8.1:23868988-23869007 | MS.gene065446:intron | 35.0% | |
TGACATTCATTGATAGGTGT+TGG | - | chr8.1:23869272-23869291 | None:intergenic | 35.0% | |
TGCAGAAGAAATTCATAGGA+AGG | + | chr8.1:23871208-23871227 | MS.gene065446:CDS | 35.0% | |
TGGAGTCTTCAAAATTAGTC+TGG | - | chr8.1:23868693-23868712 | None:intergenic | 35.0% | |
TGTGATATTGATGTTGAACC+TGG | + | chr8.1:23871177-23871196 | MS.gene065446:CDS | 35.0% | |
TTAGAATCCAAACATGAGGA+AGG | + | chr8.1:23868413-23868432 | MS.gene065446:intron | 35.0% | |
TTCAGTTGAAGGAGATTATC+CGG | + | chr8.1:23865893-23865912 | MS.gene065446:CDS | 35.0% | |
TTTAAACCCTTCCTCATGTT+TGG | - | chr8.1:23868423-23868442 | None:intergenic | 35.0% | |
TTTGTTCGAACATTCAGACA+TGG | - | chr8.1:23870911-23870930 | None:intergenic | 35.0% | |
! | AAAGTGGTCCTCCAATATTT+TGG | - | chr8.1:23869861-23869880 | None:intergenic | 35.0% |
! | AGGCTGTTACACTATTGATT+TGG | + | chr8.1:23868093-23868112 | MS.gene065446:CDS | 35.0% |
! | ATTCGTCCTAAGAGCAATTT+TGG | + | chr8.1:23867409-23867428 | MS.gene065446:intron | 35.0% |
! | ATTTGAAACTTAAGGCTTGC+TGG | - | chr8.1:23870527-23870546 | None:intergenic | 35.0% |
! | CCATCTCTTTTCTTTATGAG+TGG | - | chr8.1:23871780-23871799 | None:intergenic | 35.0% |
! | CTTTTCATGTTTACATGTCG+TGG | + | chr8.1:23867238-23867257 | MS.gene065446:intron | 35.0% |
! | GATCAGGTTGCTTAAGATAA+TGG | + | chr8.1:23871422-23871441 | MS.gene065446:intron | 35.0% |
! | GATTTGAGTTCAGTTGCATT+CGG | + | chr8.1:23869952-23869971 | MS.gene065446:intron | 35.0% |
! | GTTTAAGATGGACAGTAATC+CGG | + | chr8.1:23871284-23871303 | MS.gene065446:CDS | 35.0% |
! | TACATTTGTTGAAGCGAGTA+AGG | + | chr8.1:23871239-23871258 | MS.gene065446:CDS | 35.0% |
! | TGTAGTTTTCGTCAAAATCG+CGG | + | chr8.1:23868367-23868386 | MS.gene065446:intron | 35.0% |
! | TTATAGAGGGTGGCTTTTAA+AGG | - | chr8.1:23869792-23869811 | None:intergenic | 35.0% |
! | TTGTAGCTCTGTTATGAGAA+TGG | + | chr8.1:23870667-23870686 | MS.gene065446:CDS | 35.0% |
! | TTTAAGATGGACAGTAATCC+GGG | + | chr8.1:23871285-23871304 | MS.gene065446:CDS | 35.0% |
! | TTTGAAACTTAAGGCTTGCT+GGG | - | chr8.1:23870526-23870545 | None:intergenic | 35.0% |
!! | ACACTATTGATTTGGCTGTT+GGG | + | chr8.1:23868101-23868120 | MS.gene065446:CDS | 35.0% |
!! | ACGACAATACGTGTTTTGTT+TGG | + | chr8.1:23867037-23867056 | MS.gene065446:intron | 35.0% |
!! | AGAGATAGCTGATTTTGAAC+TGG | + | chr8.1:23866131-23866150 | MS.gene065446:CDS | 35.0% |
!! | ATAGCTGATTTTGAACTGGT+TGG | + | chr8.1:23866135-23866154 | MS.gene065446:CDS | 35.0% |
!! | GTAAGTTTAGTGGATTACAC+AGG | - | chr8.1:23869481-23869500 | None:intergenic | 35.0% |
!! | TACACTATTGATTTGGCTGT+TGG | + | chr8.1:23868100-23868119 | MS.gene065446:CDS | 35.0% |
!!! | CTTGATTGGTTTTGATTTCC+AGG | - | chr8.1:23872361-23872380 | None:intergenic | 35.0% |
!!! | GTTTTGGTTGCTACACTTTT+TGG | + | chr8.1:23868601-23868620 | MS.gene065446:intron | 35.0% |
AAAGACGGCTTCTATGATGA+TGG | + | chr8.1:23869438-23869457 | MS.gene065446:intron | 40.0% | |
AAGGGAAAAATAAGGAGGTG+GGG | + | chr8.1:23870429-23870448 | MS.gene065446:intron | 40.0% | |
AATCTCGCGCACATATGAAA+CGG | - | chr8.1:23869586-23869605 | None:intergenic | 40.0% | |
ACAATGAAAGGGGTTCACTT+CGG | + | chr8.1:23867609-23867628 | MS.gene065446:intron | 40.0% | |
ACCTTATACATGTCACCAGT+AGG | + | chr8.1:23868830-23868849 | MS.gene065446:intron | 40.0% | |
ACTGGTAAGTGGTGTTTGTT+TGG | + | chr8.1:23871346-23871365 | MS.gene065446:intron | 40.0% | |
ACTGTCAAGTGGCATTTACT+TGG | + | chr8.1:23872134-23872153 | MS.gene065446:intron | 40.0% | |
AGAAATTCATAGGAAGGGGT+TGG | + | chr8.1:23871214-23871233 | MS.gene065446:CDS | 40.0% | |
AGAAGATGAGAGGAGAAACA+AGG | - | chr8.1:23872313-23872332 | None:intergenic | 40.0% | |
AGAGACTCTGACATTGACAT+TGG | + | chr8.1:23871119-23871138 | MS.gene065446:CDS | 40.0% | |
AGGTTGGAGAAGTTTAAGGA+AGG | - | chr8.1:23868922-23868941 | None:intergenic | 40.0% | |
ATAAAGCCAACTTGATCCTG+TGG | + | chr8.1:23865754-23865773 | MS.gene065446:CDS | 40.0% | |
ATAATCCCACAGGATCAAGT+TGG | - | chr8.1:23865763-23865782 | None:intergenic | 40.0% | |
ATAGGAGTGGATGATGAATG+TGG | + | chr8.1:23871704-23871723 | MS.gene065446:intron | 40.0% | |
ATCAGAATAGTCGCCTTCAA+AGG | + | chr8.1:23865781-23865800 | MS.gene065446:CDS | 40.0% | |
ATTGGACAAAACTGTCAACG+TGG | + | chr8.1:23871986-23872005 | MS.gene065446:intron | 40.0% | |
ATTGTAATCAATAACGCCGG+TGG | + | chr8.1:23872410-23872429 | MS.gene065446:CDS | 40.0% | |
CACGAAAAGATCCATTGATG+TGG | - | chr8.1:23871089-23871108 | None:intergenic | 40.0% | |
CCACATGACCTGAAAAAAAC+AGG | - | chr8.1:23867964-23867983 | None:intergenic | 40.0% | |
CGAATTCCATTCCACATCAA+TGG | + | chr8.1:23871075-23871094 | MS.gene065446:CDS | 40.0% | |
CTAAAATTCTTGCCGAGTTG+AGG | + | chr8.1:23866234-23866253 | MS.gene065446:intron | 40.0% | |
CTCATGTCAAAAGTTGCTCA+TGG | - | chr8.1:23870077-23870096 | None:intergenic | 40.0% | |
GACTATTCTGATAATCCCAC+AGG | - | chr8.1:23865773-23865792 | None:intergenic | 40.0% | |
GAGGAAGAGAAAACGATTAC+AGG | - | chr8.1:23872291-23872310 | None:intergenic | 40.0% | |
GCAGGTTCTACATCAATTTG+AGG | - | chr8.1:23870857-23870876 | None:intergenic | 40.0% | |
GTAAGATTGCTTGGTACAAG+AGG | + | chr8.1:23868073-23868092 | MS.gene065446:CDS | 40.0% | |
GTCCACAACACAATCTTGAT+TGG | - | chr8.1:23872375-23872394 | None:intergenic | 40.0% | |
TAAAGCCAACTTGATCCTGT+GGG | + | chr8.1:23865755-23865774 | MS.gene065446:CDS | 40.0% | |
TCCCTAGGTCAAGATAGTTT+AGG | - | chr8.1:23868992-23869011 | None:intergenic | 40.0% | |
TCCTACTGGTGACATGTATA+AGG | - | chr8.1:23868834-23868853 | None:intergenic | 40.0% | |
TCTGCAACAATTTCCACCTT+TGG | - | chr8.1:23865996-23866015 | None:intergenic | 40.0% | |
TGAAATGAATGAGTCACCTG+AGG | - | chr8.1:23867295-23867314 | None:intergenic | 40.0% | |
TGAGAATGGCAACATTGAAG+AGG | + | chr8.1:23870681-23870700 | MS.gene065446:CDS | 40.0% | |
TGATAGCTTCATTGGACATG+AGG | + | chr8.1:23867993-23868012 | MS.gene065446:CDS | 40.0% | |
TGCAACATAGGTGTAGTGAT+AGG | + | chr8.1:23866266-23866285 | MS.gene065446:intron | 40.0% | |
TGTTCGAACAAATTCATGGG+AGG | + | chr8.1:23870919-23870938 | MS.gene065446:CDS | 40.0% | |
TTACATGTCGTGGGATTTGT+GGG | + | chr8.1:23867248-23867267 | MS.gene065446:intron | 40.0% | |
TTATATTGACGTCAGTGACG+GGG | - | chr8.1:23866187-23866206 | None:intergenic | 40.0% | |
TTCTTCTGCACATAATCACC+AGG | - | chr8.1:23871198-23871217 | None:intergenic | 40.0% | |
TTGGATAAGATGCAGTGTGA+AGG | + | chr8.1:23869605-23869624 | MS.gene065446:intron | 40.0% | |
TTTACATGTCGTGGGATTTG+TGG | + | chr8.1:23867247-23867266 | MS.gene065446:intron | 40.0% | |
TTTACGTCCAACTCATAAGC+TGG | + | chr8.1:23870961-23870980 | MS.gene065446:CDS | 40.0% | |
TTTCATATGTGCGCGAGATT+TGG | + | chr8.1:23869586-23869605 | MS.gene065446:intron | 40.0% | |
TTTGATGTCACACTTCCTAC+TGG | - | chr8.1:23868848-23868867 | None:intergenic | 40.0% | |
TTTGTTTGGAGACAGTGTGT+TGG | + | chr8.1:23871360-23871379 | MS.gene065446:intron | 40.0% | |
! | AAGAGAGCATGGTGGTTATT+AGG | - | chr8.1:23869717-23869736 | None:intergenic | 40.0% |
! | AATGGATCTTTTCGTGAACC+TGG | + | chr8.1:23871093-23871112 | MS.gene065446:CDS | 40.0% |
! | AATTTGGGACTGTAGCCAAA+AGG | + | chr8.1:23868245-23868264 | MS.gene065446:intron | 40.0% |
! | AGAGAGCATGGTGGTTATTA+GGG | - | chr8.1:23869716-23869735 | None:intergenic | 40.0% |
! | ATAAAGTCAAGAGAGCATGG+TGG | - | chr8.1:23869725-23869744 | None:intergenic | 40.0% |
! | ATGGATCTTTTCGTGAACCT+GGG | + | chr8.1:23871094-23871113 | MS.gene065446:CDS | 40.0% |
! | ATTTGGGACTGTAGCCAAAA+GGG | + | chr8.1:23868246-23868265 | MS.gene065446:intron | 40.0% |
!! | ATTGATTTGGCTGTTGGGTT+AGG | + | chr8.1:23868106-23868125 | MS.gene065446:CDS | 40.0% |
!! | ATTTGTGGGAGTGTCAAACT+AGG | - | chr8.1:23866299-23866318 | None:intergenic | 40.0% |
!! | GGATCAAGTTGGCTTTATGT+TGG | - | chr8.1:23865752-23865771 | None:intergenic | 40.0% |
!! | GTTTAGTGGATTACACAGGT+AGG | - | chr8.1:23869477-23869496 | None:intergenic | 40.0% |
!! | TTGAAACTTAAGGCTTGCTG+GGG | - | chr8.1:23870525-23870544 | None:intergenic | 40.0% |
!!! | CCTGTTTTTTTCAGGTCATG+TGG | + | chr8.1:23867961-23867980 | MS.gene065446:intron | 40.0% |
!!! | GTTTTTTTCAGGTCATGTGG+CGG | + | chr8.1:23867964-23867983 | MS.gene065446:intron | 40.0% |
!!! | TATCCGGTAGGTTTTGAGTT+AGG | + | chr8.1:23865909-23865928 | MS.gene065446:CDS | 40.0% |
!!! | TTTTGGATTGGTCAGTGTGT+GGG | - | chr8.1:23867531-23867550 | None:intergenic | 40.0% |
!!! | TTTTTTTCAGGTCATGTGGC+GGG | + | chr8.1:23867965-23867984 | MS.gene065446:intron | 40.0% |
AAGGAGTTTATGTGGGGTCA+AGG | + | chr8.1:23866341-23866360 | MS.gene065446:intron | 45.0% | |
AATGAGTCACCTGAGGCAAT+GGG | - | chr8.1:23867288-23867307 | None:intergenic | 45.0% | |
AATGTCAGAGTCTCTTTCCC+AGG | - | chr8.1:23871114-23871133 | None:intergenic | 45.0% | |
ACATGAGGAGGATGAAGAGA+TGG | + | chr8.1:23868008-23868027 | MS.gene065446:CDS | 45.0% | |
ACATTCAGACATGGAGGAAC+CGG | - | chr8.1:23870902-23870921 | None:intergenic | 45.0% | |
AGATGAGAGGAGAAACAAGG+AGG | - | chr8.1:23872310-23872329 | None:intergenic | 45.0% | |
AGCGTACAACTCAAGAAGGT+TGG | - | chr8.1:23868938-23868957 | None:intergenic | 45.0% | |
AGGAGGAGAAACTGCAACAT+AGG | + | chr8.1:23866254-23866273 | MS.gene065446:intron | 45.0% | |
AGGGAAAAATAAGGAGGTGG+GGG | + | chr8.1:23870430-23870449 | MS.gene065446:intron | 45.0% | |
AGTTGGCCCATAACAAAGAC+GGG | + | chr8.1:23870495-23870514 | MS.gene065446:intron | 45.0% | |
CATAACAGAGCTACAAGCTG+TGG | - | chr8.1:23870663-23870682 | None:intergenic | 45.0% | |
CATCAAGAAAGTGAGTCCAG+AGG | - | chr8.1:23871932-23871951 | None:intergenic | 45.0% | |
CATGAGGAGGATGAAGAGAT+GGG | + | chr8.1:23868009-23868028 | MS.gene065446:CDS | 45.0% | |
CTGCAAGCTGTAAGATTGCT+TGG | + | chr8.1:23868064-23868083 | MS.gene065446:CDS | 45.0% | |
CTTCTCTGCATCAACCTTAC+TGG | - | chr8.1:23870795-23870814 | None:intergenic | 45.0% | |
GAAAATAATCCACCCCCAAC+CGG | - | chr8.1:23870159-23870178 | None:intergenic | 45.0% | |
GAAGCGAGTAAGGTGAAAGT+TGG | + | chr8.1:23871249-23871268 | MS.gene065446:CDS | 45.0% | |
GAGGATGAAGAGATGGGATA+TGG | + | chr8.1:23868015-23868034 | MS.gene065446:CDS | 45.0% | |
GAGTTGGCCCATAACAAAGA+CGG | + | chr8.1:23870494-23870513 | MS.gene065446:intron | 45.0% | |
GTGTGTTATGTTTGGATGGG+AGG | + | chr8.1:23868305-23868324 | MS.gene065446:intron | 45.0% | |
GTTAAAGCGATGCAGCAAAG+TGG | - | chr8.1:23868963-23868982 | None:intergenic | 45.0% | |
GTTCGAACATTCAGACATGG+AGG | - | chr8.1:23870908-23870927 | None:intergenic | 45.0% | |
GTTGAAGGAGATTATCCGGT+AGG | + | chr8.1:23865897-23865916 | MS.gene065446:CDS | 45.0% | |
TAGCTTCATTGGACATGAGG+AGG | + | chr8.1:23867996-23868015 | MS.gene065446:CDS | 45.0% | |
TCAAACTCGCAGTTATACGG+TGG | - | chr8.1:23872452-23872471 | None:intergenic | 45.0% | |
TGAAGAGATGGGATATGGCA+TGG | + | chr8.1:23868020-23868039 | MS.gene065446:CDS | 45.0% | |
TGATTACCGTGAGCCAATAC+CGG | + | chr8.1:23870880-23870899 | MS.gene065446:CDS | 45.0% | |
TTACTGCAGTGAGTCCAGTA+AGG | + | chr8.1:23870778-23870797 | MS.gene065446:intron | 45.0% | |
! | AAATTCTTGCCGAGTTGAGG+AGG | + | chr8.1:23866237-23866256 | MS.gene065446:intron | 45.0% |
! | AAGATGCAGTTGATGCGATC+TGG | + | chr8.1:23871154-23871173 | MS.gene065446:CDS | 45.0% |
! | CGTCCTAAGAGCAATTTTGG+AGG | + | chr8.1:23867412-23867431 | MS.gene065446:intron | 45.0% |
! | GAGAGCATGGTGGTTATTAG+GGG | - | chr8.1:23869715-23869734 | None:intergenic | 45.0% |
! | GGAAAGCGTACAACTCAAGA+AGG | - | chr8.1:23868942-23868961 | None:intergenic | 45.0% |
!! | AATTGAGTGGTAGTGGGATC+TGG | - | chr8.1:23866557-23866576 | None:intergenic | 45.0% |
!!! | CTTTTGGATTGGTCAGTGTG+TGG | - | chr8.1:23867532-23867551 | None:intergenic | 45.0% |
!! | ATAATAAAAGAAATAAAAAA+TGG | + | chr8.1:23870263-23870282 | MS.gene065446:intron | 5.0% |
!! | TAATAAAAGAAATAAAAAAT+GGG | + | chr8.1:23870264-23870283 | MS.gene065446:intron | 5.0% |
!! | TAATAATAAAATTATTGAAA+TGG | + | chr8.1:23870365-23870384 | MS.gene065446:intron | 5.0% |
AGACATGGAGGAACCGGTAT+TGG | - | chr8.1:23870896-23870915 | None:intergenic | 50.0% | |
AGCATGGTGGTTATTAGGGG+AGG | - | chr8.1:23869712-23869731 | None:intergenic | 50.0% | |
CTCGTGTGGACTTTCCAGTT+GGG | + | chr8.1:23867924-23867943 | MS.gene065446:intron | 50.0% | |
CTGTCAACGTGGCATTTACC+TGG | + | chr8.1:23871997-23872016 | MS.gene065446:intron | 50.0% | |
GAATGAGTCACCTGAGGCAA+TGG | - | chr8.1:23867289-23867308 | None:intergenic | 50.0% | |
GCAGTTATACGGTGGTTCGA+CGG | - | chr8.1:23872444-23872463 | None:intergenic | 50.0% | |
GCAGTTTCTCCTCCTCAACT+CGG | - | chr8.1:23866249-23866268 | None:intergenic | 50.0% | |
GCATGGTGGTTATTAGGGGA+GGG | - | chr8.1:23869711-23869730 | None:intergenic | 50.0% | |
GTAATCAATAACGCCGGTGG+AGG | + | chr8.1:23872413-23872432 | MS.gene065446:CDS | 50.0% | |
TCGCGCACATATGAAACGGT+GGG | - | chr8.1:23869582-23869601 | None:intergenic | 50.0% | |
TCTCGTGTGGACTTTCCAGT+TGG | + | chr8.1:23867923-23867942 | MS.gene065446:intron | 50.0% | |
! | TCAACACATTTTCGGCCACG+CGG | + | chr8.1:23871954-23871973 | MS.gene065446:intron | 50.0% |
! | TCAACACATTTTCGGCCACG+TGG | + | chr8.1:23871954-23871973 | MS.gene065446:intron | 50.0% |
!! | GGGTTCGGTGATAGCTTCAT+TGG | + | chr8.1:23867985-23868004 | MS.gene065446:CDS | 50.0% |
!! | TGAATTTGGGTTGTGGCAGC+TGG | + | chr8.1:23871853-23871872 | MS.gene065446:intron | 50.0% |
!! | TGGGAGGTGCTGATTCATTC+TGG | + | chr8.1:23870935-23870954 | MS.gene065446:CDS | 50.0% |
!!! | GGGATTTTTGGGTTCTCGTG+TGG | + | chr8.1:23867910-23867929 | MS.gene065446:intron | 50.0% |
AACATACCCGTGCATCCGCA+CGG | + | chr8.1:23870130-23870149 | MS.gene065446:intron | 55.0% | |
CTCGCGCACATATGAAACGG+TGG | - | chr8.1:23869583-23869602 | None:intergenic | 55.0% | |
GGCCCATAACAAAGACGGGT+CGG | + | chr8.1:23870499-23870518 | MS.gene065446:intron | 55.0% | |
GGCTCACGGTAATCATCTGC+AGG | - | chr8.1:23870875-23870894 | None:intergenic | 55.0% | |
TCCAATCAGCAAGTGCCACG+TGG | - | chr8.1:23871972-23871991 | None:intergenic | 55.0% | |
! | ATTGACGTCAGTGACGGGGA+AGG | - | chr8.1:23866183-23866202 | None:intergenic | 55.0% |
! | GGCCGACCCGTCTTTGTTAT+GGG | - | chr8.1:23870504-23870523 | None:intergenic | 55.0% |
! | TACAATCAGCAAGTGCCGCG+TGG | - | chr8.1:23872110-23872129 | None:intergenic | 55.0% |
! | TTGACGTCAGTGACGGGGAA+GGG | - | chr8.1:23866182-23866201 | None:intergenic | 55.0% |
! | TTGGCTGTTGGGTTAGGTGC+TGG | + | chr8.1:23868112-23868131 | MS.gene065446:CDS | 55.0% |
!! | GAGGAACCGGTATTGGCTCA+CGG | - | chr8.1:23870889-23870908 | None:intergenic | 55.0% |
!! | TTCAGGTCATGTGGCGGGTT+CGG | + | chr8.1:23867970-23867989 | MS.gene065446:intron | 55.0% |
ACATACCCGTGCATCCGCAC+GGG | + | chr8.1:23870131-23870150 | MS.gene065446:intron | 60.0% | |
CACACAGCTCCCATTGCCTC+AGG | + | chr8.1:23867276-23867295 | MS.gene065446:intron | 60.0% | |
CTGAGGCAATGGGAGCTGTG+TGG | - | chr8.1:23867278-23867297 | None:intergenic | 60.0% | |
GGGCCGACCCGTCTTTGTTA+TGG | - | chr8.1:23870505-23870524 | None:intergenic | 60.0% | |
! | GCCACGTGGCACTTGCTGAT+TGG | + | chr8.1:23871968-23871987 | MS.gene065446:intron | 60.0% |
! | TGACGTCAGTGACGGGGAAG+GGG | - | chr8.1:23866181-23866200 | None:intergenic | 60.0% |
!! | TTCGACGGTGTTGCCTCCAC+CGG | - | chr8.1:23872429-23872448 | None:intergenic | 60.0% |
!! | ATCCGCACGGGTACCGGTTG+GGG | + | chr8.1:23870143-23870162 | MS.gene065446:intron | 65.0% |
!! | CATCCGCACGGGTACCGGTT+GGG | + | chr8.1:23870142-23870161 | MS.gene065446:intron | 65.0% |
ACCCCCAACCGGTACCCGTG+CGG | - | chr8.1:23870148-23870167 | None:intergenic | 70.0% | |
CCGGTACCCGTGCGGATGCA+CGG | - | chr8.1:23870140-23870159 | None:intergenic | 70.0% | |
CCGTGCATCCGCACGGGTAC+CGG | + | chr8.1:23870137-23870156 | MS.gene065446:intron | 70.0% | |
CGGTACCCGTGCGGATGCAC+GGG | - | chr8.1:23870139-23870158 | None:intergenic | 70.0% | |
!! | GCATCCGCACGGGTACCGGT+TGG | + | chr8.1:23870141-23870160 | MS.gene065446:intron | 70.0% |
!! | TCCGCACGGGTACCGGTTGG+GGG | + | chr8.1:23870144-23870163 | MS.gene065446:intron | 70.0% |
!! | GCACGGGTACCGGTTGGGGG+TGG | + | chr8.1:23870147-23870166 | MS.gene065446:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 23865723 | 23872487 | 23865723 | ID=MS.gene065446 |
chr8.1 | mRNA | 23865723 | 23872487 | 23865723 | ID=MS.gene065446.t1;Parent=MS.gene065446 |
chr8.1 | exon | 23865723 | 23866023 | 23865723 | ID=MS.gene065446.t1.exon1;Parent=MS.gene065446.t1 |
chr8.1 | CDS | 23865723 | 23866023 | 23865723 | ID=cds.MS.gene065446.t1;Parent=MS.gene065446.t1 |
chr8.1 | exon | 23866115 | 23866174 | 23866115 | ID=MS.gene065446.t1.exon2;Parent=MS.gene065446.t1 |
chr8.1 | CDS | 23866115 | 23866174 | 23866115 | ID=cds.MS.gene065446.t1;Parent=MS.gene065446.t1 |
chr8.1 | exon | 23867975 | 23868196 | 23867975 | ID=MS.gene065446.t1.exon3;Parent=MS.gene065446.t1 |
chr8.1 | CDS | 23867975 | 23868196 | 23867975 | ID=cds.MS.gene065446.t1;Parent=MS.gene065446.t1 |
chr8.1 | exon | 23870666 | 23870702 | 23870666 | ID=MS.gene065446.t1.exon4;Parent=MS.gene065446.t1 |
chr8.1 | CDS | 23870666 | 23870702 | 23870666 | ID=cds.MS.gene065446.t1;Parent=MS.gene065446.t1 |
chr8.1 | exon | 23870787 | 23870982 | 23870787 | ID=MS.gene065446.t1.exon5;Parent=MS.gene065446.t1 |
chr8.1 | CDS | 23870787 | 23870982 | 23870787 | ID=cds.MS.gene065446.t1;Parent=MS.gene065446.t1 |
chr8.1 | exon | 23871075 | 23871306 | 23871075 | ID=MS.gene065446.t1.exon6;Parent=MS.gene065446.t1 |
chr8.1 | CDS | 23871075 | 23871306 | 23871075 | ID=cds.MS.gene065446.t1;Parent=MS.gene065446.t1 |
chr8.1 | exon | 23872405 | 23872487 | 23872405 | ID=MS.gene065446.t1.exon7;Parent=MS.gene065446.t1 |
chr8.1 | CDS | 23872405 | 23872487 | 23872405 | ID=cds.MS.gene065446.t1;Parent=MS.gene065446.t1 |
Gene Sequence |
Protein sequence |