Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069840.t1 | XP_013451595.1 | 98.1 | 413 | 8 | 0 | 5 | 417 | 30 | 442 | 3.90E-220 | 773.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069840.t1 | Q8RWF4 | 73.7 | 407 | 102 | 3 | 5 | 408 | 30 | 434 | 3.4e-164 | 579.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069840.t1 | A0A072U945 | 98.1 | 413 | 8 | 0 | 5 | 417 | 30 | 442 | 2.8e-220 | 773.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene069840 | 0.806418 | 8.31E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene069840 | 0.809657 | 1.70E-50 | -1.69E-46 |
| MS.gene04998 | MS.gene069840 | 0.823091 | 1.67E-53 | -1.69E-46 |
| MS.gene050654 | MS.gene069840 | 0.81042 | 1.16E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene069840 | 0.806757 | 7.04E-50 | -1.69E-46 |
| MS.gene051490 | MS.gene069840 | 0.803228 | 3.85E-49 | -1.69E-46 |
| MS.gene051541 | MS.gene069840 | 0.81423 | 1.71E-51 | -1.69E-46 |
| MS.gene052016 | MS.gene069840 | 0.849447 | 3.21E-60 | -1.69E-46 |
| MS.gene052118 | MS.gene069840 | 0.81454 | 1.46E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene069840 | 0.824598 | 7.40E-54 | -1.69E-46 |
| MS.gene052493 | MS.gene069840 | 0.831225 | 1.88E-55 | -1.69E-46 |
| MS.gene052533 | MS.gene069840 | 0.812798 | 3.54E-51 | -1.69E-46 |
| MS.gene053298 | MS.gene069840 | 0.812663 | 3.79E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene069840 | 0.803047 | 4.20E-49 | -1.69E-46 |
| MS.gene054617 | MS.gene069840 | 0.819694 | 1.02E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene069840 | 0.861044 | 1.35E-63 | -1.69E-46 |
| MS.gene054893 | MS.gene069840 | 0.857976 | 1.13E-62 | -1.69E-46 |
| MS.gene055229 | MS.gene069840 | 0.808532 | 2.96E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene069840 | 0.834794 | 2.44E-56 | -1.69E-46 |
| MS.gene055864 | MS.gene069840 | 0.824023 | 1.01E-53 | -1.69E-46 |
| MS.gene056699 | MS.gene069840 | 0.800853 | 1.19E-48 | -1.69E-46 |
| MS.gene057102 | MS.gene069840 | 0.807245 | 5.55E-50 | -1.69E-46 |
| MS.gene057155 | MS.gene069840 | 0.803164 | 3.97E-49 | -1.69E-46 |
| MS.gene058159 | MS.gene069840 | 0.813035 | 3.14E-51 | -1.69E-46 |
| MS.gene058289 | MS.gene069840 | 0.804922 | 1.71E-49 | -1.69E-46 |
| MS.gene058429 | MS.gene069840 | 0.813926 | 2.00E-51 | -1.69E-46 |
| MS.gene058720 | MS.gene069840 | 0.808684 | 2.74E-50 | -1.69E-46 |
| MS.gene059144 | MS.gene069840 | 0.80009 | 1.70E-48 | -1.69E-46 |
| MS.gene059170 | MS.gene069840 | 0.838133 | 3.45E-57 | -1.69E-46 |
| MS.gene05952 | MS.gene069840 | 0.803569 | 3.27E-49 | -1.69E-46 |
| MS.gene059774 | MS.gene069840 | 0.850376 | 1.77E-60 | -1.69E-46 |
| MS.gene05985 | MS.gene069840 | -0.805266 | 1.45E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene069840 | 0.826696 | 2.35E-54 | -1.69E-46 |
| MS.gene060259 | MS.gene069840 | 0.80885 | 2.53E-50 | -1.69E-46 |
| MS.gene060413 | MS.gene069840 | 0.802059 | 6.71E-49 | -1.69E-46 |
| MS.gene060697 | MS.gene069840 | 0.849906 | 2.39E-60 | -1.69E-46 |
| MS.gene060932 | MS.gene069840 | 0.84795 | 8.36E-60 | -1.69E-46 |
| MS.gene061047 | MS.gene069840 | 0.826776 | 2.25E-54 | -1.69E-46 |
| MS.gene061100 | MS.gene069840 | 0.805215 | 1.49E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069840.t1 | MTR_6g033100 | 98.063 | 413 | 8 | 0 | 5 | 417 | 30 | 442 | 0.0 | 828 |
| MS.gene069840.t1 | MTR_3g083960 | 20.205 | 292 | 217 | 2 | 27 | 318 | 50 | 325 | 1.45e-13 | 71.6 |
| MS.gene069840.t1 | MTR_4g074050 | 19.630 | 270 | 197 | 4 | 32 | 298 | 54 | 306 | 1.00e-11 | 66.2 |
| MS.gene069840.t1 | MTR_2g006070 | 21.708 | 281 | 195 | 3 | 27 | 299 | 60 | 323 | 4.52e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069840.t1 | AT3G26670 | 73.464 | 407 | 103 | 3 | 5 | 408 | 30 | 434 | 0.0 | 607 |
| MS.gene069840.t1 | AT3G26670 | 73.464 | 407 | 103 | 3 | 5 | 408 | 30 | 434 | 0.0 | 607 |
| MS.gene069840.t1 | AT3G26670 | 73.464 | 407 | 103 | 3 | 5 | 408 | 30 | 434 | 0.0 | 607 |
| MS.gene069840.t1 | AT3G26670 | 73.464 | 407 | 103 | 3 | 5 | 408 | 30 | 434 | 0.0 | 607 |
| MS.gene069840.t1 | AT4G09640 | 21.569 | 306 | 212 | 6 | 32 | 334 | 67 | 347 | 3.97e-11 | 64.7 |
| MS.gene069840.t1 | AT1G34470 | 22.846 | 267 | 178 | 2 | 32 | 291 | 67 | 312 | 4.14e-11 | 64.7 |
| MS.gene069840.t1 | AT2G21120 | 19.322 | 295 | 209 | 5 | 12 | 301 | 36 | 306 | 4.93e-11 | 63.9 |
Find 76 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCAGTACTGCTGGATTT+TGG | 0.142862 | 6.2:-21496896 | MS.gene069840:CDS |
| TGTGCACTATCTCTTGGTTT+TGG | 0.174892 | 6.2:-21494030 | MS.gene069840:CDS |
| TCTTAGCCGTTACTTGTAAA+TGG | 0.216028 | 6.2:+21497447 | None:intergenic |
| CAGTCACTTCTTGCAGCTTT+GGG | 0.250820 | 6.2:-21497999 | MS.gene069840:CDS |
| GATAAAGATTACAGATATTC+TGG | 0.265706 | 6.2:-21494158 | MS.gene069840:CDS |
| GCAGTCACTTCTTGCAGCTT+TGG | 0.277025 | 6.2:-21498000 | MS.gene069840:intron |
| GCCACAGCTTTCATTGTTCT+TGG | 0.284449 | 6.2:-21497793 | MS.gene069840:CDS |
| GTTCATTGGTATTTCTTTGC+TGG | 0.299314 | 6.2:-21494693 | MS.gene069840:CDS |
| CGAGACTAAAGATAGTTCTT+TGG | 0.306013 | 6.2:-21494562 | MS.gene069840:CDS |
| AGCCAAAGGAAATGAAATTA+AGG | 0.313097 | 6.2:+21498373 | None:intergenic |
| TGCCTTAATTTCATTTCCTT+TGG | 0.323753 | 6.2:-21498375 | MS.gene069840:CDS |
| CAACTCTGAAAGTATATAAT+AGG | 0.327966 | 6.2:+21498524 | None:intergenic |
| GTCTTTGCTGTGTGCTTCTT+CGG | 0.331223 | 6.2:+21494207 | None:intergenic |
| ACATGACCTCAAACCCATTT+GGG | 0.334317 | 6.2:-21497325 | MS.gene069840:CDS |
| CCTCTTTGTTTCTGTTGAAA+TGG | 0.356734 | 6.2:+21494521 | None:intergenic |
| TTACTTTGTGTTGAACAAAA+TGG | 0.359982 | 6.2:-21497943 | MS.gene069840:CDS |
| TTCATTCTTGATGACATCAT+TGG | 0.366184 | 6.2:+21493970 | None:intergenic |
| TTCCTTTGGCTATGCTGCTC+AGG | 0.369645 | 6.2:-21498361 | MS.gene069840:intron |
| AACAGGTATTTGACACGTTA+AGG | 0.379853 | 6.2:-21494748 | MS.gene069840:intron |
| CGGCAATAGCATACCCCAAA+TGG | 0.385675 | 6.2:+21497311 | None:intergenic |
| GTAGCAGACTTACAGTGATT+TGG | 0.388285 | 6.2:+21497236 | None:intergenic |
| GACATGACCTCAAACCCATT+TGG | 0.390111 | 6.2:-21497326 | MS.gene069840:CDS |
| GAACTTCTGCTTGCTATATC+AGG | 0.394740 | 6.2:-21497348 | MS.gene069840:CDS |
| CTTGGAAGTGATGGGGTACA+TGG | 0.397753 | 6.2:-21498563 | MS.gene069840:CDS |
| ACTTCTTGTGCACTATCTCT+TGG | 0.403283 | 6.2:-21494036 | MS.gene069840:CDS |
| TATTTCTCTGTCAACTGCTC+TGG | 0.408057 | 6.2:+21497532 | None:intergenic |
| TTGTCCTTTAAACAGGGTAT+TGG | 0.422996 | 6.2:-21497818 | MS.gene069840:intron |
| TTACGACTGGCTATGTCTAA+TGG | 0.429669 | 6.2:-21496963 | MS.gene069840:CDS |
| AGGACAACAATGTTTATACT+TGG | 0.430760 | 6.2:-21494728 | MS.gene069840:CDS |
| TTTGTTTCTGTTGAAATGGC+AGG | 0.454053 | 6.2:+21494525 | None:intergenic |
| CAGAGAGAAAGACATTTACT+TGG | 0.454553 | 6.2:-21498581 | MS.gene069840:CDS |
| CTATTATATACTTTCAGAGT+TGG | 0.454723 | 6.2:-21498523 | MS.gene069840:CDS |
| ATGGCTATCAGCTGCACAGC+TGG | 0.462592 | 6.2:-21496944 | MS.gene069840:CDS |
| AGACATTTACTTGGAAGTGA+TGG | 0.463692 | 6.2:-21498572 | MS.gene069840:CDS |
| TAGACATAGCCAGTCGTAAG+AGG | 0.475251 | 6.2:+21496967 | None:intergenic |
| TACTTTCAGAGTTGGAGAAT+CGG | 0.476261 | 6.2:-21498515 | MS.gene069840:intron |
| TTCCCATGTTTCAAATAGCA+TGG | 0.482456 | 6.2:-21496734 | MS.gene069840:CDS |
| TTTGTTGCATCTTCATCCAT+AGG | 0.490370 | 6.2:+21493877 | None:intergenic |
| GACATTTACTTGGAAGTGAT+GGG | 0.492218 | 6.2:-21498571 | MS.gene069840:CDS |
| ACATTCTTCTCAATCTGTAC+AGG | 0.494590 | 6.2:-21496711 | MS.gene069840:CDS |
| CAATTACAATCAAAGCTAGA+AGG | 0.499368 | 6.2:+21497485 | None:intergenic |
| GGAATGATGTGTGTGTTCAT+TGG | 0.500051 | 6.2:-21494707 | MS.gene069840:CDS |
| TACGTTACATACCAGGTGAT+TGG | 0.503118 | 6.2:+21497740 | None:intergenic |
| ATGATGTCATCAAGAATGAA+TGG | 0.511671 | 6.2:-21493967 | MS.gene069840:CDS |
| GCATACCCCAAATGGGTTTG+AGG | 0.512283 | 6.2:+21497319 | None:intergenic |
| CTGGCACCTGATGAATCAAA+AGG | 0.517430 | 6.2:-21494674 | MS.gene069840:intron |
| CAAAGAACTATCTTTAGTCT+CGG | 0.521362 | 6.2:+21494563 | None:intergenic |
| GGCAATAGCATACCCCAAAT+GGG | 0.523524 | 6.2:+21497312 | None:intergenic |
| CAGATGACTAGGTTGAATGA+AGG | 0.523979 | 6.2:-21496786 | MS.gene069840:CDS |
| TGGTTGGAGCAAAATACCTA+TGG | 0.531629 | 6.2:-21493893 | MS.gene069840:CDS |
| ATGAATGGCTTCAGAGGCAA+TGG | 0.532560 | 6.2:-21493952 | MS.gene069840:CDS |
| GAAACTACAGCATATGAAAA+CGG | 0.535353 | 6.2:+21497291 | None:intergenic |
| TATCGATGAGAAATTCTGGT+TGG | 0.535924 | 6.2:-21493909 | MS.gene069840:CDS |
| GTCCATGCTATTTGAAACAT+GGG | 0.543572 | 6.2:+21496732 | None:intergenic |
| TGTCCATGCTATTTGAAACA+TGG | 0.547427 | 6.2:+21496731 | None:intergenic |
| AGATATTCTGGTCAAGGCAA+AGG | 0.550087 | 6.2:-21494146 | MS.gene069840:intron |
| CAGTTCTAACCTCTTACGAC+TGG | 0.564450 | 6.2:-21496976 | MS.gene069840:CDS |
| TCAAGAATGAATGGCTTCAG+AGG | 0.564716 | 6.2:-21493958 | MS.gene069840:CDS |
| GATTACAGATATTCTGGTCA+AGG | 0.568159 | 6.2:-21494152 | MS.gene069840:CDS |
| ACTGAGAAATAAAAGAAGCA+TGG | 0.568619 | 6.2:+21496911 | None:intergenic |
| TTTCATATGCTGTAGTTTCG+GGG | 0.572383 | 6.2:-21497287 | MS.gene069840:CDS |
| AATAAGAATTGCATCGAACA+TGG | 0.577173 | 6.2:+21496758 | None:intergenic |
| GTACAGAAGGAACGCGACAT+TGG | 0.594650 | 6.2:+21497507 | None:intergenic |
| AACAAACACTATCAAGGGCT+AGG | 0.595279 | 6.2:+21493826 | None:intergenic |
| TCAAAGCTAGAAGGTACAGA+AGG | 0.607754 | 6.2:+21497494 | None:intergenic |
| TTCATATGCTGTAGTTTCGG+GGG | 0.615874 | 6.2:-21497286 | MS.gene069840:CDS |
| TGAAATGGCAGGAGACACTA+CGG | 0.632048 | 6.2:+21494536 | None:intergenic |
| AAACACTATCAAGGGCTAGG+AGG | 0.632929 | 6.2:+21493829 | None:intergenic |
| CCATTTCAACAGAAACAAAG+AGG | 0.633660 | 6.2:-21494521 | MS.gene069840:intron |
| TCCAAGAACAATGAAAGCTG+TGG | 0.636557 | 6.2:+21497792 | None:intergenic |
| TTTGGAAATCACCAATCACC+TGG | 0.643242 | 6.2:-21497751 | MS.gene069840:intron |
| TCAGAGGCAATGGACTCGAA+CGG | 0.648762 | 6.2:-21493942 | MS.gene069840:CDS |
| ACACAAAGTAAGCGAATGCG+AGG | 0.654505 | 6.2:+21497955 | None:intergenic |
| ACATTTACTTGGAAGTGATG+GGG | 0.654846 | 6.2:-21498570 | MS.gene069840:CDS |
| TACCTGAGCAGCATAGCCAA+AGG | 0.659340 | 6.2:+21498359 | None:intergenic |
| CATGACCTCAAACCCATTTG+GGG | 0.699560 | 6.2:-21497324 | MS.gene069840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGAAATACTATAAATA+GGG | - | chr6.2:21496720-21496739 | MS.gene069840:CDS | 10.0% |
| !! | TTAATATGAGAAATATTAAA+GGG | - | chr6.2:21497047-21497066 | MS.gene069840:intron | 10.0% |
| !! | TTTAATATTACAAATACAAT+GGG | + | chr6.2:21496001-21496020 | None:intergenic | 10.0% |
| !!! | ATAAATACAAAATTGTTTTA+AGG | - | chr6.2:21497786-21497805 | MS.gene069840:CDS | 10.0% |
| !!! | ATTATAGATTGAAAATTTTA+GGG | - | chr6.2:21497137-21497156 | MS.gene069840:intron | 10.0% |
| !!! | TGTTTTTTCATAATAAATTT+AGG | - | chr6.2:21497636-21497655 | MS.gene069840:intron | 10.0% |
| !!! | TTTTAATATTACAAATACAA+TGG | + | chr6.2:21496002-21496021 | None:intergenic | 10.0% |
| !! | AATTGAAATACTATAAATAG+GGG | - | chr6.2:21496721-21496740 | MS.gene069840:CDS | 15.0% |
| !! | ATCATAAAATTACATATGTT+AGG | + | chr6.2:21494134-21494153 | None:intergenic | 15.0% |
| !! | CTTAATATGAGAAATATTAA+AGG | - | chr6.2:21497046-21497065 | MS.gene069840:intron | 15.0% |
| !! | GAAATTGAAATACTATAAAT+AGG | - | chr6.2:21496719-21496738 | MS.gene069840:CDS | 15.0% |
| !! | TGAAATAATTTCAAAATACT+TGG | - | chr6.2:21496096-21496115 | MS.gene069840:intron | 15.0% |
| !! | TTCTTAAATATATATCCTAA+GGG | + | chr6.2:21495920-21495939 | None:intergenic | 15.0% |
| !!! | AATTTTTTTTACCGAAAAAT+AGG | + | chr6.2:21495569-21495588 | None:intergenic | 15.0% |
| !!! | GATTATAGATTGAAAATTTT+AGG | - | chr6.2:21497136-21497155 | MS.gene069840:intron | 15.0% |
| !!! | TCAAATGAACTTTTTTTTTA+AGG | + | chr6.2:21494360-21494379 | None:intergenic | 15.0% |
| !! | AAATATTAAATTAAGCCACA+AGG | + | chr6.2:21494597-21494616 | None:intergenic | 20.0% |
| !! | AATTAAATGTAATCATGTGT+CGG | + | chr6.2:21495316-21495335 | None:intergenic | 20.0% |
| !! | AATTTCCAAGAAAGAAAAAT+AGG | + | chr6.2:21494039-21494058 | None:intergenic | 20.0% |
| !! | AGAAGTTAAAATCAAACTTA+TGG | - | chr6.2:21495859-21495878 | MS.gene069840:intron | 20.0% |
| !! | ATTGAAATACTATAAATAGG+GGG | - | chr6.2:21496722-21496741 | MS.gene069840:CDS | 20.0% |
| !! | GTCTACTTATTAAGAATAAA+CGG | + | chr6.2:21497423-21497442 | None:intergenic | 20.0% |
| !! | GTTCTTAAATATATATCCTA+AGG | + | chr6.2:21495921-21495940 | None:intergenic | 20.0% |
| !! | TAATATTTGTCCTTTAAACA+GGG | - | chr6.2:21494609-21494628 | MS.gene069840:intron | 20.0% |
| !! | TAATTTCAAAATACTTGGTT+TGG | - | chr6.2:21496101-21496120 | MS.gene069840:intron | 20.0% |
| !! | TACTTCATAATAATCAAAGT+TGG | + | chr6.2:21497272-21497291 | None:intergenic | 20.0% |
| !! | TATATCAGATAAAACAGTAT+TGG | + | chr6.2:21498191-21498210 | None:intergenic | 20.0% |
| !! | TTAATATTTGTCCTTTAAAC+AGG | - | chr6.2:21494608-21494627 | MS.gene069840:intron | 20.0% |
| !! | TTTCGGTAAAAAAAATTCTT+AGG | - | chr6.2:21495572-21495591 | MS.gene069840:intron | 20.0% |
| !!! | AATACTGTTTTATCTGATAT+AGG | - | chr6.2:21498190-21498209 | MS.gene069840:intron | 20.0% |
| !!! | ATATGATAATTGTTCACTTT+TGG | + | chr6.2:21497960-21497979 | None:intergenic | 20.0% |
| !!! | GAAATATTAAAGGGTATATT+AGG | - | chr6.2:21497056-21497075 | MS.gene069840:intron | 20.0% |
| !!! | GTCATTTTCTTAAAATACTA+TGG | - | chr6.2:21494286-21494305 | MS.gene069840:intron | 20.0% |
| !!! | TACAGGATTTATATATTTTC+AGG | - | chr6.2:21495739-21495758 | MS.gene069840:intron | 20.0% |
| !!! | TATATATTTTCAGGAATATC+AGG | - | chr6.2:21495748-21495767 | MS.gene069840:intron | 20.0% |
| !!! | TTGTATAAATTTTGATATGC+AGG | - | chr6.2:21494010-21494029 | MS.gene069840:CDS | 20.0% |
| !!! | TTTTTTTCTGAAGCTTAATA+TGG | + | chr6.2:21494794-21494813 | None:intergenic | 20.0% |
| ! | AAATTATTTCAGCGATGATA+TGG | + | chr6.2:21496087-21496106 | None:intergenic | 25.0% |
| ! | AGAAAAAATGCTCATTTCAA+TGG | - | chr6.2:21494832-21494851 | MS.gene069840:intron | 25.0% |
| ! | ATAAAAGTTGTAGAAGTGAT+AGG | + | chr6.2:21497558-21497577 | None:intergenic | 25.0% |
| ! | ATATGCAATTACATGTAATC+AGG | - | chr6.2:21496956-21496975 | MS.gene069840:CDS | 25.0% |
| ! | ATTAAGAATAAACGGAGTTA+TGG | + | chr6.2:21497415-21497434 | None:intergenic | 25.0% |
| ! | CTAAATTCATTGAGTTAACT+AGG | - | chr6.2:21497114-21497133 | MS.gene069840:intron | 25.0% |
| ! | CTATTATATACTTTCAGAGT+TGG | - | chr6.2:21493910-21493929 | MS.gene069840:CDS | 25.0% |
| ! | GATAAAGATTACAGATATTC+TGG | - | chr6.2:21498275-21498294 | MS.gene069840:intron | 25.0% |
| ! | TGTAATTGCATATATGTATG+TGG | - | chr6.2:21493946-21493965 | MS.gene069840:CDS | 25.0% |
| ! | TTACTTTGTGTTGAACAAAA+TGG | - | chr6.2:21494490-21494509 | MS.gene069840:intron | 25.0% |
| !! | AATCATTTAGTTTCCTTTCA+GGG | + | chr6.2:21497994-21498013 | None:intergenic | 25.0% |
| !! | AGAGTAGACTTATGAATTTT+AGG | + | chr6.2:21495943-21495962 | None:intergenic | 25.0% |
| !! | AGGATTTTTCTAATGAATAG+CGG | - | chr6.2:21497323-21497342 | MS.gene069840:CDS | 25.0% |
| !! | ATTTTATCGATGAGAAATTC+TGG | - | chr6.2:21498520-21498539 | MS.gene069840:CDS | 25.0% |
| !! | CAACTCTGAAAGTATATAAT+AGG | + | chr6.2:21493912-21493931 | None:intergenic | 25.0% |
| !! | TAGGAAAGTACACTATTAAA+GGG | - | chr6.2:21497075-21497094 | MS.gene069840:intron | 25.0% |
| !! | TTACATTGGTAGAACAATTT+TGG | + | chr6.2:21494572-21494591 | None:intergenic | 25.0% |
| !! | TTAGGAAAGTACACTATTAA+AGG | - | chr6.2:21497074-21497093 | MS.gene069840:intron | 25.0% |
| !!! | AAAATTTTAGGGATGCAAAT+GGG | - | chr6.2:21497148-21497167 | MS.gene069840:intron | 25.0% |
| !!! | ATAATACCTTTTGATTCATC+AGG | + | chr6.2:21497768-21497787 | None:intergenic | 25.0% |
| !!! | ATATGAACATTGATTTCACA+AGG | + | chr6.2:21494754-21494773 | None:intergenic | 25.0% |
| !!! | TTTTATGGAGAAGTACTTAT+AGG | - | chr6.2:21496631-21496650 | MS.gene069840:intron | 25.0% |
| AAAAACAAGAATCAGCAACA+TGG | + | chr6.2:21493988-21494007 | None:intergenic | 30.0% | |
| AACCTTATCTTCATGAAAAC+AGG | - | chr6.2:21497668-21497687 | MS.gene069840:intron | 30.0% | |
| AATAAGAATTGCATCGAACA+TGG | + | chr6.2:21495678-21495697 | None:intergenic | 30.0% | |
| ACATAGGTAATCAGAAGAAA+AGG | + | chr6.2:21494399-21494418 | None:intergenic | 30.0% | |
| ACATCTGCAAACATTTATGA+AGG | + | chr6.2:21495599-21495618 | None:intergenic | 30.0% | |
| ACTGAGAAATAAAAGAAGCA+TGG | + | chr6.2:21495525-21495544 | None:intergenic | 30.0% | |
| ACTGTGTACTTTATTCCTAA+TGG | - | chr6.2:21495420-21495439 | MS.gene069840:intron | 30.0% | |
| AGCCAAAGGAAATGAAATTA+AGG | + | chr6.2:21494063-21494082 | None:intergenic | 30.0% | |
| AGGACAACAATGTTTATACT+TGG | - | chr6.2:21497705-21497724 | MS.gene069840:intron | 30.0% | |
| ATCACTCCATTTACAAGTAA+CGG | - | chr6.2:21494980-21494999 | MS.gene069840:intron | 30.0% | |
| ATGATGTCATCAAGAATGAA+TGG | - | chr6.2:21498466-21498485 | MS.gene069840:intron | 30.0% | |
| CAAAGAACTATCTTTAGTCT+CGG | + | chr6.2:21497873-21497892 | None:intergenic | 30.0% | |
| CAATTACAATCAAAGCTAGA+AGG | + | chr6.2:21494951-21494970 | None:intergenic | 30.0% | |
| GAAACTACAGCATATGAAAA+CGG | + | chr6.2:21495145-21495164 | None:intergenic | 30.0% | |
| GATTAAAATGTGAAATGTGC+AGG | - | chr6.2:21495056-21495075 | MS.gene069840:intron | 30.0% | |
| GTAGTTTCTGAGTAAGAATT+CGG | - | chr6.2:21496264-21496283 | MS.gene069840:intron | 30.0% | |
| GTGCAAACTAATTTATGTGA+CGG | - | chr6.2:21494854-21494873 | MS.gene069840:intron | 30.0% | |
| TATGAAATACGTTACATACC+AGG | + | chr6.2:21494703-21494722 | None:intergenic | 30.0% | |
| TCATAAGTCTACTCTTACTT+TGG | - | chr6.2:21495948-21495967 | MS.gene069840:intron | 30.0% | |
| TGCCTTAATTTCATTTCCTT+TGG | - | chr6.2:21494058-21494077 | MS.gene069840:intron | 30.0% | |
| TTAATAAGTAGACATCCTTC+CGG | - | chr6.2:21497430-21497449 | MS.gene069840:intron | 30.0% | |
| TTGAATGTATTCACATGTGT+CGG | + | chr6.2:21494262-21494281 | None:intergenic | 30.0% | |
| ! | AAAACATCCAATAAGTATCG+TGG | + | chr6.2:21494110-21494129 | None:intergenic | 30.0% |
| ! | CAAAGGTATATCATTATGAC+TGG | - | chr6.2:21498304-21498323 | MS.gene069840:intron | 30.0% |
| ! | CAATCATTTAGTTTCCTTTC+AGG | + | chr6.2:21497995-21498014 | None:intergenic | 30.0% |
| ! | CTTTTCCTAACTGAATTCAT+GGG | + | chr6.2:21496812-21496831 | None:intergenic | 30.0% |
| ! | GGAAAATAAGGTCTTTTGTA+AGG | + | chr6.2:21496591-21496610 | None:intergenic | 30.0% |
| ! | GTTTTCATATGCTGTAGTTT+CGG | - | chr6.2:21495144-21495163 | MS.gene069840:intron | 30.0% |
| ! | TAAGCACATGTTGCTTATTA+TGG | - | chr6.2:21498149-21498168 | MS.gene069840:intron | 30.0% |
| ! | TAAGGTTTTACTATAAACCG+AGG | - | chr6.2:21497804-21497823 | MS.gene069840:CDS | 30.0% |
| ! | TACCTGTTTTCATGAAGATA+AGG | + | chr6.2:21497673-21497692 | None:intergenic | 30.0% |
| ! | TCTTTTCCTAACTGAATTCA+TGG | + | chr6.2:21496813-21496832 | None:intergenic | 30.0% |
| ! | TTCATTCTTGATGACATCAT+TGG | + | chr6.2:21498466-21498485 | None:intergenic | 30.0% |
| ! | TTCTAATTTTGCAGATGACT+AGG | - | chr6.2:21495636-21495655 | MS.gene069840:intron | 30.0% |
| ! | TTTTCATATGCTGTAGTTTC+GGG | - | chr6.2:21495145-21495164 | MS.gene069840:intron | 30.0% |
| !! | CTAATGGATTGTAAAAACGA+GGG | + | chr6.2:21496412-21496431 | None:intergenic | 30.0% |
| !! | CTTATATGTTGCTATTTCCT+GGG | - | chr6.2:21496459-21496478 | MS.gene069840:intron | 30.0% |
| !! | GAAAATTTTAGGGATGCAAA+TGG | - | chr6.2:21497147-21497166 | MS.gene069840:intron | 30.0% |
| !! | GGTATCCTATTTTTCTTTCT+TGG | - | chr6.2:21494031-21494050 | MS.gene069840:CDS | 30.0% |
| !! | GTAGAACAATTTTGGTGAAA+AGG | + | chr6.2:21494564-21494583 | None:intergenic | 30.0% |
| !! | TCGTTTTTACAATCCATTAG+AGG | - | chr6.2:21496412-21496431 | MS.gene069840:intron | 30.0% |
| !! | TCTAATGGATTGTAAAAACG+AGG | + | chr6.2:21496413-21496432 | None:intergenic | 30.0% |
| !!! | AATGTTTTTCTAGTTGCGTT+TGG | - | chr6.2:21494664-21494683 | MS.gene069840:intron | 30.0% |
| !!! | ATGTTGCTGATTCTTGTTTT+TGG | - | chr6.2:21493987-21494006 | MS.gene069840:CDS | 30.0% |
| !!! | CTTTGTAAGTTTTGTTCAGA+TGG | - | chr6.2:21497240-21497259 | MS.gene069840:intron | 30.0% |
| AAAACCATACATTCAGACCT+GGG | + | chr6.2:21496861-21496880 | None:intergenic | 35.0% | |
| AACAGAGATGATAGAAGGAT+AGG | + | chr6.2:21496888-21496907 | None:intergenic | 35.0% | |
| AACAGGTATTTGACACGTTA+AGG | - | chr6.2:21497685-21497704 | MS.gene069840:intron | 35.0% | |
| AATTCGGCTAGAAGAGAATA+TGG | - | chr6.2:21496280-21496299 | MS.gene069840:intron | 35.0% | |
| ACAGAGATGATAGAAGGATA+GGG | + | chr6.2:21496887-21496906 | None:intergenic | 35.0% | |
| ACATTCTTCTCAATCTGTAC+AGG | - | chr6.2:21495722-21495741 | MS.gene069840:intron | 35.0% | |
| ACATTTACTTGGAAGTGATG+GGG | - | chr6.2:21493863-21493882 | MS.gene069840:CDS | 35.0% | |
| AGACATTTACTTGGAAGTGA+TGG | - | chr6.2:21493861-21493880 | MS.gene069840:CDS | 35.0% | |
| AGAGTAGGTAGTTAGTTACT+GGG | - | chr6.2:21496751-21496770 | MS.gene069840:CDS | 35.0% | |
| ATTCGGCTAGAAGAGAATAT+GGG | - | chr6.2:21496281-21496300 | MS.gene069840:intron | 35.0% | |
| ATTTAAAAGACGTCCCTGAA+AGG | - | chr6.2:21497978-21497997 | MS.gene069840:CDS | 35.0% | |
| CAGAGAGAAAGACATTTACT+TGG | - | chr6.2:21493852-21493871 | MS.gene069840:CDS | 35.0% | |
| CAGTTAAGAATCATCATGCA+AGG | + | chr6.2:21497200-21497219 | None:intergenic | 35.0% | |
| CATACTGTTATAGCAAGTTG+AGG | - | chr6.2:21496349-21496368 | MS.gene069840:intron | 35.0% | |
| CCAAGATATACACAATACAC+TGG | - | chr6.2:21496979-21496998 | MS.gene069840:intron | 35.0% | |
| CCAGTGTATTGTGTATATCT+TGG | + | chr6.2:21496982-21497001 | None:intergenic | 35.0% | |
| CCATTTCAACAGAAACAAAG+AGG | - | chr6.2:21497912-21497931 | MS.gene069840:intron | 35.0% | |
| CGAAAAACAGAGATGATAGA+AGG | + | chr6.2:21496893-21496912 | None:intergenic | 35.0% | |
| CGAGACTAAAGATAGTTCTT+TGG | - | chr6.2:21497871-21497890 | MS.gene069840:intron | 35.0% | |
| CTACTCCTACTTTGATGAAA+TGG | - | chr6.2:21495891-21495910 | MS.gene069840:intron | 35.0% | |
| CTAGTATTCCCCAACAAATA+GGG | - | chr6.2:21496219-21496238 | MS.gene069840:intron | 35.0% | |
| CTTATCGAAACTGATAGCAT+CGG | + | chr6.2:21498348-21498367 | None:intergenic | 35.0% | |
| GACATTTACTTGGAAGTGAT+GGG | - | chr6.2:21493862-21493881 | MS.gene069840:CDS | 35.0% | |
| GATTACAGATATTCTGGTCA+AGG | - | chr6.2:21498281-21498300 | MS.gene069840:intron | 35.0% | |
| GTTAGGAAAAGAGATAACAC+AGG | - | chr6.2:21496784-21496803 | MS.gene069840:CDS | 35.0% | |
| GTTCATTGGTATTTCTTTGC+TGG | - | chr6.2:21497740-21497759 | MS.gene069840:intron | 35.0% | |
| TAAGCCACAAGGATTTACAT+TGG | + | chr6.2:21494586-21494605 | None:intergenic | 35.0% | |
| TACTTTCAGAGTTGGAGAAT+CGG | - | chr6.2:21493918-21493937 | MS.gene069840:CDS | 35.0% | |
| TAGTATTCCCCAACAAATAG+GGG | - | chr6.2:21496220-21496239 | MS.gene069840:intron | 35.0% | |
| TATCGATGAGAAATTCTGGT+TGG | - | chr6.2:21498524-21498543 | MS.gene069840:CDS | 35.0% | |
| TCCTAGTATGCTTTCTGTTA+AGG | - | chr6.2:21497457-21497476 | MS.gene069840:intron | 35.0% | |
| TCTACCAATGTAAATCCTTG+TGG | - | chr6.2:21494579-21494598 | MS.gene069840:intron | 35.0% | |
| TCTAGTATTCCCCAACAAAT+AGG | - | chr6.2:21496218-21496237 | MS.gene069840:intron | 35.0% | |
| TCTGCAAATAGACAGAAACT+TGG | + | chr6.2:21498378-21498397 | None:intergenic | 35.0% | |
| TCTTAGCCGTTACTTGTAAA+TGG | + | chr6.2:21494989-21495008 | None:intergenic | 35.0% | |
| TGATTAAATCGGCATATCTC+CGG | - | chr6.2:21496536-21496555 | MS.gene069840:intron | 35.0% | |
| TTCCATTCCACGATACTTAT+TGG | - | chr6.2:21494100-21494119 | MS.gene069840:intron | 35.0% | |
| TTCCCATGTTTCAAATAGCA+TGG | - | chr6.2:21495699-21495718 | MS.gene069840:intron | 35.0% | |
| TTGTCCTCAAGAGGAAAATA+AGG | + | chr6.2:21496603-21496622 | None:intergenic | 35.0% | |
| TTGTCCTTTAAACAGGGTAT+TGG | - | chr6.2:21494615-21494634 | MS.gene069840:intron | 35.0% | |
| TTTCATATGCTGTAGTTTCG+GGG | - | chr6.2:21495146-21495165 | MS.gene069840:intron | 35.0% | |
| TTTGTTGCATCTTCATCCAT+AGG | + | chr6.2:21498559-21498578 | None:intergenic | 35.0% | |
| ! | ATCCAATAAGTATCGTGGAA+TGG | + | chr6.2:21494105-21494124 | None:intergenic | 35.0% |
| ! | GTATTGGCATTAGTGAAAGT+CGG | + | chr6.2:21498175-21498194 | None:intergenic | 35.0% |
| ! | GTCCATGCTATTTGAAACAT+GGG | + | chr6.2:21495704-21495723 | None:intergenic | 35.0% |
| ! | TCCTAATGGCAACTTCATTT+TGG | - | chr6.2:21495434-21495453 | MS.gene069840:intron | 35.0% |
| ! | TCCTTAACAGAAAGCATACT+AGG | + | chr6.2:21497461-21497480 | None:intergenic | 35.0% |
| ! | TGTCCATGCTATTTGAAACA+TGG | + | chr6.2:21495705-21495724 | None:intergenic | 35.0% |
| ! | TTAACAGAAAGCATACTAGG+AGG | + | chr6.2:21497458-21497477 | None:intergenic | 35.0% |
| ! | TTATTTTCCTCTTGAGGACA+AGG | - | chr6.2:21496602-21496621 | MS.gene069840:intron | 35.0% |
| !! | ACTTGGTTTGGTAGTGTTAT+TGG | - | chr6.2:21496113-21496132 | MS.gene069840:intron | 35.0% |
| !! | CCTCTTTGTTTCTGTTGAAA+TGG | + | chr6.2:21497915-21497934 | None:intergenic | 35.0% |
| !! | CTCAACTTGCTATAACAGTA+TGG | + | chr6.2:21496351-21496370 | None:intergenic | 35.0% |
| !! | CTTTTATTTCTCAGTACTGC+TGG | - | chr6.2:21495530-21495549 | MS.gene069840:intron | 35.0% |
| !! | GAGAAGTACTTATAGGTACA+CGG | - | chr6.2:21496638-21496657 | MS.gene069840:intron | 35.0% |
| !! | GCTTATATGTTGCTATTTCC+TGG | - | chr6.2:21496458-21496477 | MS.gene069840:intron | 35.0% |
| !! | TTTGGGTAAGGCCTATTTTT+CGG | - | chr6.2:21495555-21495574 | MS.gene069840:intron | 35.0% |
| !! | TTTGTTTCTGTTGAAATGGC+AGG | + | chr6.2:21497911-21497930 | None:intergenic | 35.0% |
| !!! | AAGACCTTATTTTCCTCTTG+AGG | - | chr6.2:21496596-21496615 | MS.gene069840:intron | 35.0% |
| ACATGACCTCAAACCCATTT+GGG | - | chr6.2:21495108-21495127 | MS.gene069840:intron | 40.0% | |
| ACGAAGAACGTAAACTCGAT+AGG | - | chr6.2:21497303-21497322 | MS.gene069840:CDS | 40.0% | |
| ACTTCTTGTGCACTATCTCT+TGG | - | chr6.2:21498397-21498416 | MS.gene069840:CDS | 40.0% | |
| AGATATTCTGGTCAAGGCAA+AGG | - | chr6.2:21498287-21498306 | MS.gene069840:intron | 40.0% | |
| AGTATTCCCCAACAAATAGG+GGG | - | chr6.2:21496221-21496240 | MS.gene069840:intron | 40.0% | |
| ATGCCTTCGATCAGAAGATT+TGG | + | chr6.2:21494213-21494232 | None:intergenic | 40.0% | |
| CAAAACCATACATTCAGACC+TGG | + | chr6.2:21496862-21496881 | None:intergenic | 40.0% | |
| CAGAGATGATAGAAGGATAG+GGG | + | chr6.2:21496886-21496905 | None:intergenic | 40.0% | |
| CAGAGTAGGTAGTTAGTTAC+TGG | - | chr6.2:21496750-21496769 | MS.gene069840:CDS | 40.0% | |
| GACTATTGTCTTGAAGAGCA+AGG | + | chr6.2:21496506-21496525 | None:intergenic | 40.0% | |
| GCAACCAATACCCTGTTTAA+AGG | + | chr6.2:21494622-21494641 | None:intergenic | 40.0% | |
| GCCAAAATGAAGTTGCCATT+AGG | + | chr6.2:21495438-21495457 | None:intergenic | 40.0% | |
| GCTATAACAGTATGGTACCT+AGG | + | chr6.2:21496343-21496362 | None:intergenic | 40.0% | |
| GGAATGATGTGTGTGTTCAT+TGG | - | chr6.2:21497726-21497745 | MS.gene069840:intron | 40.0% | |
| GGAGTCCATTTCATCAAAGT+AGG | + | chr6.2:21495899-21495918 | None:intergenic | 40.0% | |
| GTAGCAGACTTACAGTGATT+TGG | + | chr6.2:21495200-21495219 | None:intergenic | 40.0% | |
| TACGTTACATACCAGGTGAT+TGG | + | chr6.2:21494696-21494715 | None:intergenic | 40.0% | |
| TACTGGGAACGAATTCAGTT+AGG | - | chr6.2:21496767-21496786 | MS.gene069840:CDS | 40.0% | |
| TAGATGTGGCAGTTACGAAA+GGG | - | chr6.2:21496136-21496155 | MS.gene069840:intron | 40.0% | |
| TATTTCTCTGTCAACTGCTC+TGG | + | chr6.2:21494904-21494923 | None:intergenic | 40.0% | |
| TCAAGAATGAATGGCTTCAG+AGG | - | chr6.2:21498475-21498494 | MS.gene069840:intron | 40.0% | |
| TCCAAGAACAATGAAAGCTG+TGG | + | chr6.2:21494644-21494663 | None:intergenic | 40.0% | |
| TGGTTGGAGCAAAATACCTA+TGG | - | chr6.2:21498540-21498559 | MS.gene069840:CDS | 40.0% | |
| TGTCTGTGTGTATACTTCCT+AGG | - | chr6.2:21496323-21496342 | MS.gene069840:intron | 40.0% | |
| TTCATATGCTGTAGTTTCGG+GGG | - | chr6.2:21495147-21495166 | MS.gene069840:intron | 40.0% | |
| TTCGGCTAGAAGAGAATATG+GGG | - | chr6.2:21496282-21496301 | MS.gene069840:intron | 40.0% | |
| TTTATAGCTTCTCCTTGCCA+CGG | - | chr6.2:21495828-21495847 | MS.gene069840:intron | 40.0% | |
| TTTGGAAATCACCAATCACC+TGG | - | chr6.2:21494682-21494701 | MS.gene069840:CDS | 40.0% | |
| ! | ACACTTTCCATCAAAGGTGT+CGG | + | chr6.2:21495259-21495278 | None:intergenic | 40.0% |
| ! | ACAGCTATGGGAATCTTTTG+AGG | - | chr6.2:21496565-21496584 | MS.gene069840:intron | 40.0% |
| ! | AGGAAGTATACACACAGACA+TGG | + | chr6.2:21496323-21496342 | None:intergenic | 40.0% |
| ! | AGGACAAGGTGAACGTTTTA+TGG | - | chr6.2:21496616-21496635 | MS.gene069840:intron | 40.0% |
| ! | ATGTAATCATGTGTCGGTGT+CGG | + | chr6.2:21495310-21495329 | None:intergenic | 40.0% |
| ! | CAGATGACTAGGTTGAATGA+AGG | - | chr6.2:21495647-21495666 | MS.gene069840:intron | 40.0% |
| ! | CAGTGAGCTGCTGATTAAAT+CGG | - | chr6.2:21496525-21496544 | MS.gene069840:intron | 40.0% |
| ! | GGTAGTGTTATTGGTAGATG+TGG | - | chr6.2:21496122-21496141 | MS.gene069840:intron | 40.0% |
| ! | TCAAAGCTAGAAGGTACAGA+AGG | + | chr6.2:21494942-21494961 | None:intergenic | 40.0% |
| ! | TCTCAGTACTGCTGGATTTT+GGG | - | chr6.2:21495538-21495557 | MS.gene069840:intron | 40.0% |
| ! | TGTGCACTATCTCTTGGTTT+TGG | - | chr6.2:21498403-21498422 | MS.gene069840:CDS | 40.0% |
| ! | TTACGACTGGCTATGTCTAA+TGG | - | chr6.2:21495470-21495489 | MS.gene069840:intron | 40.0% |
| ! | TTCTCAGTACTGCTGGATTT+TGG | - | chr6.2:21495537-21495556 | MS.gene069840:intron | 40.0% |
| ! | TTGATGAAATGGACTCCCTT+AGG | - | chr6.2:21495902-21495921 | MS.gene069840:intron | 40.0% |
| !! | CTACGAAAGCATTTGTGAAG+AGG | - | chr6.2:21496664-21496683 | MS.gene069840:intron | 40.0% |
| !! | GAACTTCTGCTTGCTATATC+AGG | - | chr6.2:21495085-21495104 | MS.gene069840:intron | 40.0% |
| !! | GTGCACTATCTCTTGGTTTT+GGG | - | chr6.2:21498404-21498423 | MS.gene069840:CDS | 40.0% |
| !!! | TGCACTATCTCTTGGTTTTG+GGG | - | chr6.2:21498405-21498424 | MS.gene069840:intron | 40.0% |
| AAAGCTGCAAGAAGTGACTG+CGG | + | chr6.2:21494434-21494453 | None:intergenic | 45.0% | |
| AAATAGGGGGTCAGCAAAGT+AGG | - | chr6.2:21496234-21496253 | MS.gene069840:intron | 45.0% | |
| AAATGTGAAATGTGCAGGCG+AGG | - | chr6.2:21495061-21495080 | MS.gene069840:intron | 45.0% | |
| AATAGGGGGTTTAGCAGAGT+AGG | - | chr6.2:21496736-21496755 | MS.gene069840:CDS | 45.0% | |
| ACACAAAGTAAGCGAATGCG+AGG | + | chr6.2:21494481-21494500 | None:intergenic | 45.0% | |
| ACTAGATCGCTGCTAATGAC+AGG | + | chr6.2:21496204-21496223 | None:intergenic | 45.0% | |
| AGGATGTCTTCCAATTCCGT+CGG | + | chr6.2:21496486-21496505 | None:intergenic | 45.0% | |
| AGGTGCCCATGAATTCAGTT+AGG | - | chr6.2:21496804-21496823 | MS.gene069840:intron | 45.0% | |
| ATGAATGGCTTCAGAGGCAA+TGG | - | chr6.2:21498481-21498500 | MS.gene069840:intron | 45.0% | |
| CAGTCACTTCTTGCAGCTTT+GGG | - | chr6.2:21494434-21494453 | MS.gene069840:intron | 45.0% | |
| CATGACCTCAAACCCATTTG+GGG | - | chr6.2:21495109-21495128 | MS.gene069840:intron | 45.0% | |
| CTGGCACCTGATGAATCAAA+AGG | - | chr6.2:21497759-21497778 | MS.gene069840:CDS | 45.0% | |
| GACATGACCTCAAACCCATT+TGG | - | chr6.2:21495107-21495126 | MS.gene069840:intron | 45.0% | |
| GCACCAAATCTTCTGATCGA+AGG | - | chr6.2:21494207-21494226 | MS.gene069840:CDS | 45.0% | |
| GCCACAGCTTTCATTGTTCT+TGG | - | chr6.2:21494640-21494659 | MS.gene069840:intron | 45.0% | |
| GCGGAGGAAATAGAAGACAT+AGG | + | chr6.2:21494415-21494434 | None:intergenic | 45.0% | |
| GGCAATAGCATACCCCAAAT+GGG | + | chr6.2:21495124-21495143 | None:intergenic | 45.0% | |
| GTAGATGTGGCAGTTACGAA+AGG | - | chr6.2:21496135-21496154 | MS.gene069840:intron | 45.0% | |
| TAGACATAGCCAGTCGTAAG+AGG | + | chr6.2:21495469-21495488 | None:intergenic | 45.0% | |
| TAGCAATCGTTGGCACATTC+AGG | - | chr6.2:21496372-21496391 | MS.gene069840:intron | 45.0% | |
| TCAGAGTTGGAGAATCGGTA+TGG | - | chr6.2:21493923-21493942 | MS.gene069840:CDS | 45.0% | |
| TGAAATGGCAGGAGACACTA+CGG | + | chr6.2:21497900-21497919 | None:intergenic | 45.0% | |
| TTAACTTCTTCGAGTGTCCG+TGG | + | chr6.2:21495848-21495867 | None:intergenic | 45.0% | |
| TTACGGATGTGTCAGTGTCT+TGG | - | chr6.2:21495355-21495374 | MS.gene069840:intron | 45.0% | |
| TTAGGGATGCAAATGGGACA+CGG | - | chr6.2:21497154-21497173 | MS.gene069840:intron | 45.0% | |
| TTGCTGACCCCCTATTTGTT+GGG | + | chr6.2:21496231-21496250 | None:intergenic | 45.0% | |
| TTGGCACATTCAGGAATGAG+AGG | - | chr6.2:21496381-21496400 | MS.gene069840:intron | 45.0% | |
| TTTGCTGACCCCCTATTTGT+TGG | + | chr6.2:21496232-21496251 | None:intergenic | 45.0% | |
| ! | AGACGCGAGATCTTTTGTCA+AGG | - | chr6.2:21498245-21498264 | MS.gene069840:intron | 45.0% |
| ! | CAAGTTGAGGTAGCAATCGT+TGG | - | chr6.2:21496362-21496381 | MS.gene069840:intron | 45.0% |
| ! | CAGTTCTAACCTCTTACGAC+TGG | - | chr6.2:21495457-21495476 | MS.gene069840:intron | 45.0% |
| ! | GAAAGCATACTAGGAGGTTC+CGG | + | chr6.2:21497452-21497471 | None:intergenic | 45.0% |
| ! | GACGCGAGATCTTTTGTCAA+GGG | - | chr6.2:21498246-21498265 | MS.gene069840:intron | 45.0% |
| ! | GTATTCACATGTGTCGGTGT+CGG | + | chr6.2:21494256-21494275 | None:intergenic | 45.0% |
| ! | GTCTTTGCTGTGTGCTTCTT+CGG | + | chr6.2:21498229-21498248 | None:intergenic | 45.0% |
| !! | CCTTTGATGGAAAGTGTCTC+CGG | - | chr6.2:21495262-21495281 | MS.gene069840:intron | 45.0% |
| !! | GTACTGCTGGATTTTGGGTA+AGG | - | chr6.2:21495543-21495562 | MS.gene069840:intron | 45.0% |
| !! | TACGAAAGGGTGGTGTTGTT+TGG | - | chr6.2:21496149-21496168 | MS.gene069840:intron | 45.0% |
| !! | TGAAGCACTGACACGAACAT+CGG | + | chr6.2:21494334-21494353 | None:intergenic | 45.0% |
| !!! | ACTATCTCTTGGTTTTGGGG+AGG | - | chr6.2:21498408-21498427 | MS.gene069840:intron | 45.0% |
| !!! | TTAATTTTTCAAATTTTTTA+CGG | - | chr6.2:21495338-21495357 | MS.gene069840:intron | 5.0% |
| AACTTGACTGCATGCCTGCT+AGG | - | chr6.2:21497365-21497384 | MS.gene069840:intron | 50.0% | |
| ACCTTCGCTAGCACCTCTAA+TGG | + | chr6.2:21496428-21496447 | None:intergenic | 50.0% | |
| ACGTTCACCTTGTCCTCAAG+AGG | + | chr6.2:21496612-21496631 | None:intergenic | 50.0% | |
| ATGTGGCAGTTACGAAAGGG+TGG | - | chr6.2:21496139-21496158 | MS.gene069840:intron | 50.0% | |
| CCGGAGACACTTTCCATCAA+AGG | + | chr6.2:21495265-21495284 | None:intergenic | 50.0% | |
| CGGCAATAGCATACCCCAAA+TGG | + | chr6.2:21495125-21495144 | None:intergenic | 50.0% | |
| GCAAATGGGACACGGCAATA+TGG | - | chr6.2:21497162-21497181 | MS.gene069840:intron | 50.0% | |
| GCAGTCACTTCTTGCAGCTT+TGG | - | chr6.2:21494433-21494452 | MS.gene069840:intron | 50.0% | |
| GTACAGAAGGAACGCGACAT+TGG | + | chr6.2:21494929-21494948 | None:intergenic | 50.0% | |
| TACCTGAGCAGCATAGCCAA+AGG | + | chr6.2:21494077-21494096 | None:intergenic | 50.0% | |
| TCAGACCTGGGCGAATTCAT+GGG | + | chr6.2:21496849-21496868 | None:intergenic | 50.0% | |
| TGCTAGCGAAGGTAGGATCA+GGG | - | chr6.2:21496435-21496454 | MS.gene069840:intron | 50.0% | |
| TTCAGACCTGGGCGAATTCA+TGG | + | chr6.2:21496850-21496869 | None:intergenic | 50.0% | |
| TTCCCATAGCTGTCACAGTC+CGG | + | chr6.2:21496558-21496577 | None:intergenic | 50.0% | |
| TTCCTTTGGCTATGCTGCTC+AGG | - | chr6.2:21494072-21494091 | MS.gene069840:intron | 50.0% | |
| TTCGCCCAGGTCTGAATGTA+TGG | - | chr6.2:21496854-21496873 | MS.gene069840:intron | 50.0% | |
| ! | CTTGGAAGTGATGGGGTACA+TGG | - | chr6.2:21493870-21493889 | MS.gene069840:CDS | 50.0% |
| ! | GCATACCCCAAATGGGTTTG+AGG | + | chr6.2:21495117-21495136 | None:intergenic | 50.0% |
| ! | TCAGAGGCAATGGACTCGAA+CGG | - | chr6.2:21498491-21498510 | MS.gene069840:intron | 50.0% |
| ! | TGCTGACCCCCTATTTGTTG+GGG | + | chr6.2:21496230-21496249 | None:intergenic | 50.0% |
| !! | TCCATTAGAGGTGCTAGCGA+AGG | - | chr6.2:21496424-21496443 | MS.gene069840:intron | 50.0% |
| !! | TTAGAGGTGCTAGCGAAGGT+AGG | - | chr6.2:21496428-21496447 | MS.gene069840:intron | 50.0% |
| !! | TTGCTATTTCCTGGGACCGA+CGG | - | chr6.2:21496467-21496486 | MS.gene069840:intron | 50.0% |
| AGGGGGTCAGCAAAGTAGGT+TGG | - | chr6.2:21496238-21496257 | MS.gene069840:intron | 55.0% | |
| ATGGCTATCAGCTGCACAGC+TGG | - | chr6.2:21495489-21495508 | MS.gene069840:intron | 55.0% | |
| CGTATAGACGCGTCAGACAC+CGG | + | chr6.2:21495284-21495303 | None:intergenic | 55.0% | |
| CTCCGGACTGTGACAGCTAT+GGG | - | chr6.2:21496553-21496572 | MS.gene069840:intron | 55.0% | |
| GCATACTAGGAGGTTCCGGA+AGG | + | chr6.2:21497448-21497467 | None:intergenic | 55.0% | |
| GCTAGCGAAGGTAGGATCAG+GGG | - | chr6.2:21496436-21496455 | MS.gene069840:intron | 55.0% | |
| GCTGTAGTTTCGGGGGCTAT+AGG | - | chr6.2:21495154-21495173 | MS.gene069840:intron | 55.0% | |
| GGGGGTCAGCAAAGTAGGTT+GGG | - | chr6.2:21496239-21496258 | MS.gene069840:intron | 55.0% | |
| GTGCTAGCGAAGGTAGGATC+AGG | - | chr6.2:21496434-21496453 | MS.gene069840:intron | 55.0% | |
| TCTCCGGACTGTGACAGCTA+TGG | - | chr6.2:21496552-21496571 | MS.gene069840:intron | 55.0% | |
| TGCCTGCTAGGTGAGGTATG+CGG | - | chr6.2:21497377-21497396 | MS.gene069840:intron | 55.0% | |
| TTCTTCGAGTGTCCGTGGCA+AGG | + | chr6.2:21495843-21495862 | None:intergenic | 55.0% | |
| TTTCCTGGGACCGACGGAAT+TGG | - | chr6.2:21496473-21496492 | MS.gene069840:intron | 55.0% | |
| ! | GGTCAGCAAAGTAGGTTGGG+AGG | - | chr6.2:21496242-21496261 | MS.gene069840:intron | 55.0% |
| !! | CAAAGGTGTCGGTGCTGCAA+AGG | + | chr6.2:21495248-21495267 | None:intergenic | 55.0% |
| !! | TGCAGCACCGACACCTTTGA+TGG | - | chr6.2:21495249-21495268 | MS.gene069840:intron | 55.0% |
| AGCCGCATACCTCACCTAGC+AGG | + | chr6.2:21497382-21497401 | None:intergenic | 60.0% | |
| AGGTGCCCATGAATTCGCCC+AGG | - | chr6.2:21496841-21496860 | MS.gene069840:intron | 60.0% | |
| CTTCCAATTCCGTCGGTCCC+AGG | + | chr6.2:21496479-21496498 | None:intergenic | 60.0% | |
| GACTGCATGCCTGCTAGGTG+AGG | - | chr6.2:21497370-21497389 | MS.gene069840:intron | 60.0% | |
| GCTGCAAGAAGTGACTGCGG+AGG | + | chr6.2:21494431-21494450 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 21493837 | 21498618 | 21493837 | ID=MS.gene069840 |
| chr6.2 | mRNA | 21493837 | 21498618 | 21493837 | ID=MS.gene069840.t1;Parent=MS.gene069840 |
| chr6.2 | exon | 21498516 | 21498618 | 21498516 | ID=MS.gene069840.t1.exon1;Parent=MS.gene069840.t1 |
| chr6.2 | CDS | 21498516 | 21498618 | 21498516 | ID=cds.MS.gene069840.t1;Parent=MS.gene069840.t1 |
| chr6.2 | exon | 21498362 | 21498423 | 21498362 | ID=MS.gene069840.t1.exon2;Parent=MS.gene069840.t1 |
| chr6.2 | CDS | 21498362 | 21498423 | 21498362 | ID=cds.MS.gene069840.t1;Parent=MS.gene069840.t1 |
| chr6.2 | exon | 21497933 | 21498018 | 21497933 | ID=MS.gene069840.t1.exon3;Parent=MS.gene069840.t1 |
| chr6.2 | CDS | 21497933 | 21498018 | 21497933 | ID=cds.MS.gene069840.t1;Parent=MS.gene069840.t1 |
| chr6.2 | exon | 21497752 | 21497825 | 21497752 | ID=MS.gene069840.t1.exon4;Parent=MS.gene069840.t1 |
| chr6.2 | CDS | 21497752 | 21497825 | 21497752 | ID=cds.MS.gene069840.t1;Parent=MS.gene069840.t1 |
| chr6.2 | exon | 21497460 | 21497562 | 21497460 | ID=MS.gene069840.t1.exon5;Parent=MS.gene069840.t1 |
| chr6.2 | CDS | 21497460 | 21497562 | 21497460 | ID=cds.MS.gene069840.t1;Parent=MS.gene069840.t1 |
| chr6.2 | exon | 21497249 | 21497377 | 21497249 | ID=MS.gene069840.t1.exon6;Parent=MS.gene069840.t1 |
| chr6.2 | CDS | 21497249 | 21497377 | 21497249 | ID=cds.MS.gene069840.t1;Parent=MS.gene069840.t1 |
| chr6.2 | exon | 21496896 | 21496995 | 21496896 | ID=MS.gene069840.t1.exon7;Parent=MS.gene069840.t1 |
| chr6.2 | CDS | 21496896 | 21496995 | 21496896 | ID=cds.MS.gene069840.t1;Parent=MS.gene069840.t1 |
| chr6.2 | exon | 21496686 | 21496805 | 21496686 | ID=MS.gene069840.t1.exon8;Parent=MS.gene069840.t1 |
| chr6.2 | CDS | 21496686 | 21496805 | 21496686 | ID=cds.MS.gene069840.t1;Parent=MS.gene069840.t1 |
| chr6.2 | exon | 21494675 | 21494765 | 21494675 | ID=MS.gene069840.t1.exon9;Parent=MS.gene069840.t1 |
| chr6.2 | CDS | 21494675 | 21494765 | 21494675 | ID=cds.MS.gene069840.t1;Parent=MS.gene069840.t1 |
| chr6.2 | exon | 21494522 | 21494588 | 21494522 | ID=MS.gene069840.t1.exon10;Parent=MS.gene069840.t1 |
| chr6.2 | CDS | 21494522 | 21494588 | 21494522 | ID=cds.MS.gene069840.t1;Parent=MS.gene069840.t1 |
| chr6.2 | exon | 21494147 | 21494243 | 21494147 | ID=MS.gene069840.t1.exon11;Parent=MS.gene069840.t1 |
| chr6.2 | CDS | 21494147 | 21494243 | 21494147 | ID=cds.MS.gene069840.t1;Parent=MS.gene069840.t1 |
| chr6.2 | exon | 21493837 | 21494058 | 21493837 | ID=MS.gene069840.t1.exon12;Parent=MS.gene069840.t1 |
| chr6.2 | CDS | 21493837 | 21494058 | 21493837 | ID=cds.MS.gene069840.t1;Parent=MS.gene069840.t1 |
| Gene Sequence |
| Protein sequence |
