AlfalfaGEDB | MS.gene074034

M. sativa cultivar XinJiangDaYe / MS.gene074034

KEGG: K09338
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00046.32 PF02183.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074034.t1	XP_003613642.1	96.6	236	2	1	1	230	48	283	6.50E-100	373.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074034.t1	Q8LC03	63.5	233	75	3	7	230	63	294	3.1e-50	199.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074034.t1	G7KB59	96.6	236	2	1	1	230	48	283	4.7e-100	373.6

TFs/TRs:

Gene ID	Type	Classification
MS.gene074034.t1	TF	HB-HD-ZIP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049142	MS.gene074034	0.83341	5.42E-56	-1.69E-46
MS.gene049341	MS.gene074034	0.806718	7.18E-50	-1.69E-46
MS.gene049350	MS.gene074034	0.838209	3.29E-57	-1.69E-46
MS.gene049711	MS.gene074034	0.827932	1.19E-54	-1.69E-46
MS.gene049807	MS.gene074034	0.827259	1.73E-54	-1.69E-46
MS.gene049824	MS.gene074034	0.821769	3.39E-53	-1.69E-46
MS.gene049825	MS.gene074034	0.800606	1.33E-48	-1.69E-46
MS.gene049887	MS.gene074034	0.831149	1.97E-55	-1.69E-46
MS.gene050807	MS.gene074034	0.837295	5.65E-57	-1.69E-46
MS.gene050808	MS.gene074034	0.800047	1.73E-48	-1.69E-46
MS.gene051700	MS.gene074034	0.826786	2.24E-54	-1.69E-46
MS.gene051719	MS.gene074034	0.833323	5.70E-56	-1.69E-46
MS.gene051720	MS.gene074034	0.835491	1.63E-56	-1.69E-46
MS.gene051885	MS.gene074034	0.802576	5.25E-49	-1.69E-46
MS.gene052133	MS.gene074034	0.812263	4.63E-51	-1.69E-46
MS.gene052239	MS.gene074034	-0.802086	6.63E-49	-1.69E-46
MS.gene052335	MS.gene074034	0.803116	4.06E-49	-1.69E-46
MS.gene052516	MS.gene074034	0.829289	5.59E-55	-1.69E-46
MS.gene053144	MS.gene074034	0.848235	6.97E-60	-1.69E-46
MS.gene053174	MS.gene074034	0.810983	8.79E-51	-1.69E-46
MS.gene053226	MS.gene074034	0.825843	3.76E-54	-1.69E-46
MS.gene053563	MS.gene074034	0.813772	2.16E-51	-1.69E-46
MS.gene053581	MS.gene074034	0.83307	6.59E-56	-1.69E-46
MS.gene053597	MS.gene074034	0.821253	4.46E-53	-1.69E-46
MS.gene053599	MS.gene074034	0.839544	1.49E-57	-1.69E-46
MS.gene05364	MS.gene074034	0.818959	1.49E-52	-1.69E-46
MS.gene054550	MS.gene074034	0.804718	1.89E-49	-1.69E-46
MS.gene054584	MS.gene074034	0.83101	2.13E-55	-1.69E-46
MS.gene055465	MS.gene074034	0.820781	5.72E-53	-1.69E-46
MS.gene055466	MS.gene074034	0.820355	7.17E-53	-1.69E-46
MS.gene055468	MS.gene074034	0.818878	1.56E-52	-1.69E-46
MS.gene055469	MS.gene074034	0.815919	7.22E-52	-1.69E-46
MS.gene055512	MS.gene074034	0.834332	3.19E-56	-1.69E-46
MS.gene055537	MS.gene074034	0.830084	3.58E-55	-1.69E-46
MS.gene055580	MS.gene074034	-0.826286	2.95E-54	-1.69E-46
MS.gene055890	MS.gene074034	0.838238	3.24E-57	-1.69E-46
MS.gene055891	MS.gene074034	0.88339	4.67E-71	-1.69E-46
MS.gene056005	MS.gene074034	0.857215	1.90E-62	-1.69E-46
MS.gene056043	MS.gene074034	-0.8164	5.64E-52	-1.69E-46
MS.gene056308	MS.gene074034	0.817408	3.35E-52	-1.69E-46
MS.gene056366	MS.gene074034	0.809058	2.28E-50	-1.69E-46
MS.gene057102	MS.gene074034	0.80715	5.82E-50	-1.69E-46
MS.gene057705	MS.gene074034	0.822209	2.68E-53	-1.69E-46
MS.gene058625	MS.gene074034	0.809442	1.89E-50	-1.69E-46
MS.gene058668	MS.gene074034	0.820066	8.35E-53	-1.69E-46
MS.gene058852	MS.gene074034	0.830347	3.09E-55	-1.69E-46
MS.gene05894	MS.gene074034	0.804658	1.94E-49	-1.69E-46
MS.gene059171	MS.gene074034	0.807938	3.96E-50	-1.69E-46
MS.gene060587	MS.gene074034	0.838426	2.90E-57	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074034.t1	MTR_5g039000	96.610	236	2	1	1	230	48	283	4.40e-167	462
MS.gene074034.t1	MTR_8g468210	83.966	237	27	5	1	230	50	282	6.18e-127	360
MS.gene074034.t1	MTR_6g011610	54.812	239	72	6	1	227	58	272	1.17e-74	228
MS.gene074034.t1	MTR_6g011610	57.209	215	65	4	17	227	62	253	2.51e-74	226
MS.gene074034.t1	MTR_7g010020	54.148	229	94	7	1	223	48	271	2.23e-70	216
MS.gene074034.t1	MTR_8g089895	44.886	176	88	3	18	191	40	208	6.43e-39	137
MS.gene074034.t1	MTR_6g007647	64.000	100	36	0	26	125	29	128	1.02e-38	135
MS.gene074034.t1	MTR_6g007647	64.000	100	36	0	26	125	63	162	3.01e-38	134
MS.gene074034.t1	MTR_3g086790	57.500	120	48	1	17	133	47	166	7.02e-38	134
MS.gene074034.t1	MTR_3g080100	54.225	142	54	2	15	145	5	146	7.58e-38	131
MS.gene074034.t1	MTR_3g080100	54.225	142	54	2	15	145	44	185	1.52e-37	132
MS.gene074034.t1	MTR_5g038280	60.169	118	46	1	8	125	66	182	1.63e-37	133
MS.gene074034.t1	MTR_8g469430	66.667	96	32	0	30	125	89	184	7.27e-37	130
MS.gene074034.t1	MTR_4g107650	57.025	121	48	1	2	122	71	187	1.93e-36	131
MS.gene074034.t1	MTR_7g103340	50.926	108	46	1	18	125	51	151	7.23e-31	114
MS.gene074034.t1	MTR_1g061660	52.885	104	46	2	15	117	45	146	4.14e-27	104
MS.gene074034.t1	MTR_3g092150	53.846	91	42	0	32	122	40	130	6.61e-26	101
MS.gene074034.t1	MTR_8g026960	41.322	121	71	0	4	124	8	128	1.11e-23	95.5
MS.gene074034.t1	MTR_4g097600	47.573	103	52	1	15	117	114	214	6.17e-21	88.6
MS.gene074034.t1	MTR_4g100550	45.545	101	54	1	18	117	107	207	7.12e-20	85.9
MS.gene074034.t1	MTR_5g019650	47.872	94	49	0	30	123	53	146	1.69e-19	84.0
MS.gene074034.t1	MTR_5g019680	48.889	90	46	0	30	119	53	142	1.99e-19	83.2
MS.gene074034.t1	MTR_7g093430	45.283	106	54	1	22	127	152	253	7.41e-19	83.6
MS.gene074034.t1	MTR_1g054285	46.875	96	51	0	22	117	146	241	1.09e-18	83.2
MS.gene074034.t1	MTR_5g014890	45.000	100	55	0	22	121	115	214	1.16e-18	82.4
MS.gene074034.t1	MTR_8g006705	48.913	92	47	0	30	121	146	237	1.56e-18	82.8
MS.gene074034.t1	MTR_2g061030	41.071	112	65	1	6	117	177	287	9.17e-18	80.9
MS.gene074034.t1	MTR_1g017090	47.727	88	46	0	30	117	130	217	1.16e-17	80.1
MS.gene074034.t1	MTR_5g013010	43.750	96	54	0	22	117	128	223	8.00e-17	77.8
MS.gene074034.t1	MTR_4g126900	44.706	85	47	0	33	117	91	175	1.91e-16	75.5
MS.gene074034.t1	MTR_4g084750	46.591	88	47	0	30	117	65	152	6.69e-16	73.6
MS.gene074034.t1	MTR_3g103590	43.617	94	53	0	8	101	123	216	7.77e-16	75.1
MS.gene074034.t1	MTR_2g038625	38.182	110	65	1	11	117	60	169	1.04e-13	68.2
MS.gene074034.t1	MTR_2g038580	38.182	110	65	1	11	117	60	169	1.04e-13	68.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074034.t1	AT1G69780	65.690	239	72	4	1	230	57	294	2.92e-103	301
MS.gene074034.t1	AT1G26960	63.426	216	59	5	17	230	58	255	7.08e-87	258
MS.gene074034.t1	AT3G01220	54.419	215	81	6	15	223	70	273	6.51e-69	213
MS.gene074034.t1	AT5G15150	48.165	218	85	6	17	223	100	300	8.69e-58	186
MS.gene074034.t1	AT5G65310	50.602	166	75	3	18	176	39	204	8.62e-42	144
MS.gene074034.t1	AT5G65310	50.602	166	75	3	18	176	57	222	1.54e-41	144
MS.gene074034.t1	AT4G40060	57.143	133	52	3	11	139	39	170	5.45e-38	134
MS.gene074034.t1	AT2G22430	67.010	97	32	0	29	125	61	157	1.09e-37	134
MS.gene074034.t1	AT3G01470	63.000	100	37	0	26	125	64	163	6.16e-37	130
MS.gene074034.t1	AT1G27045	44.737	152	77	2	4	148	41	192	3.12e-28	107
MS.gene074034.t1	AT1G27045	45.517	145	72	2	11	148	5	149	5.15e-28	105
MS.gene074034.t1	AT1G27045	45.517	145	72	2	11	148	5	149	5.15e-28	105
MS.gene074034.t1	AT1G27045	48.800	125	58	1	30	148	17	141	2.12e-27	103
MS.gene074034.t1	AT2G46680	52.688	93	44	0	31	123	33	125	1.20e-26	103
MS.gene074034.t1	AT1G27045	49.573	117	58	1	4	119	41	157	1.40e-26	103
MS.gene074034.t1	AT2G46680	53.333	90	42	0	31	120	33	122	7.11e-26	101
MS.gene074034.t1	AT3G61890	51.111	90	44	0	33	122	33	122	2.44e-24	97.1
MS.gene074034.t1	AT5G03790	51.136	88	43	0	30	117	77	164	4.53e-24	96.3
MS.gene074034.t1	AT2G18550	40.816	147	69	4	20	158	48	184	1.86e-22	91.7
MS.gene074034.t1	AT5G03790	52.500	80	38	0	30	109	77	156	1.99e-22	90.9
MS.gene074034.t1	AT4G36740	48.544	103	46	1	21	123	47	142	5.94e-22	90.5
MS.gene074034.t1	AT4G36740	48.544	103	46	1	21	123	46	141	6.45e-22	90.1
MS.gene074034.t1	AT2G36610	41.379	116	58	2	12	119	55	168	1.66e-21	88.2
MS.gene074034.t1	AT5G66700	46.552	116	53	2	17	125	60	173	3.59e-21	88.6
MS.gene074034.t1	AT5G53980	45.545	101	55	0	25	125	6	106	7.24e-21	85.9
MS.gene074034.t1	AT3G60390	45.545	101	55	0	17	117	149	249	4.01e-19	84.7
MS.gene074034.t1	AT4G37790	45.000	100	55	0	18	117	114	213	1.17e-18	82.8
MS.gene074034.t1	AT2G01430	44.554	101	56	0	17	117	126	226	2.75e-18	81.6
MS.gene074034.t1	AT5G47370	43.434	99	56	0	19	117	119	217	3.39e-18	81.6
MS.gene074034.t1	AT5G06710	45.263	95	52	0	22	116	182	276	9.55e-18	80.9
MS.gene074034.t1	AT2G22800	44.792	96	53	0	22	117	105	200	2.94e-17	79.0
MS.gene074034.t1	AT4G17460	42.708	96	55	0	22	117	127	222	9.94e-17	77.4
MS.gene074034.t1	AT2G44910	46.591	88	47	0	30	117	163	250	2.17e-16	77.0
MS.gene074034.t1	AT1G70920	37.600	125	69	2	9	133	50	165	2.91e-15	72.0
MS.gene074034.t1	AT1G70920	37.600	125	69	2	9	133	20	135	3.83e-15	71.2
MS.gene074034.t1	AT4G16780	40.625	96	57	0	22	117	121	216	4.02e-14	70.5
MS.gene074034.t1	AT2G01430	51.515	66	32	0	17	82	126	191	3.02e-13	67.0
MS.gene074034.t1	AT5G06710	51.667	60	29	0	22	81	182	241	1.08e-11	63.2

Find 33 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTTGACCATTTGAATTTC+TGG	0.030649	5.1:+29431182	None:intergenic
ATCCTTCTGTTTCTTTGTTC+AGG	0.195256	5.1:+29431375	None:intergenic
CCACCTTCTGCTAGGCCTTC+AGG	0.235321	5.1:-29431239	MS.gene074034:CDS
TGGATGATCAAGCTGGATTT+TGG	0.257444	5.1:-29431130	MS.gene074034:CDS
TTTCTGGCCTTGAAGAAGTT+TGG	0.289017	5.1:+29431198	None:intergenic
GAAGAAGAGGAGGCTTAATA+TGG	0.330137	5.1:-29432493	MS.gene074034:CDS
AACCTAGACAAGTTGCTATA+TGG	0.331625	5.1:-29432380	MS.gene074034:CDS
CTATATGGTTTCAAAATAGA+AGG	0.336540	5.1:-29432365	MS.gene074034:CDS
TCATCTGATAAATCTTCTTC+AGG	0.406192	5.1:+29432534	None:intergenic
GAAAGAGGACTATCACTTGC+TGG	0.446270	5.1:+29431296	None:intergenic
TTCAAAATAGAAGGGCTAGA+TGG	0.455440	5.1:-29432356	MS.gene074034:CDS
CCTTCTTTCCACCTTCTGCT+AGG	0.463390	5.1:-29431247	MS.gene074034:CDS
TTCAGGTTGATTGATTCTGT+TGG	0.470903	5.1:+29431392	None:intergenic
GAAGAAGATTTATCAGATGA+TGG	0.491350	5.1:-29432531	MS.gene074034:CDS
CCTAGCAGAAGGTGGAAAGA+AGG	0.498274	5.1:+29431247	None:intergenic
TTCAAGGCCAGAAATTCAAA+TGG	0.500653	5.1:-29431189	MS.gene074034:CDS
AGGTTCTGCTTGTTGTATGT+TGG	0.535809	5.1:+29431267	None:intergenic
TCAGATGATGGATCACAAGC+TGG	0.546396	5.1:-29432519	MS.gene074034:CDS
CACAAGCTGGAGAGAAGAAG+AGG	0.557400	5.1:-29432506	MS.gene074034:CDS
AGCTGAGCAATTCCACCTGA+AGG	0.558857	5.1:+29431224	None:intergenic
TGTGGTATGGATGATCAAGC+TGG	0.559995	5.1:-29431137	MS.gene074034:CDS
AACCATATAGCAACTTGTCT+AGG	0.569003	5.1:+29432378	None:intergenic
TATATGGTTTCAAAATAGAA+GGG	0.590755	5.1:-29432364	MS.gene074034:CDS
AAATGTTGTTGCTCCAACCA+TGG	0.592621	5.1:+29431107	None:intergenic
CCACCTGAAGGCCTAGCAGA+AGG	0.595631	5.1:+29431236	None:intergenic
CCTGAAGGCCTAGCAGAAGG+TGG	0.606372	5.1:+29431239	None:intergenic
GTAATAAGCTTGAGCCTGAG+AGG	0.611232	5.1:-29432434	MS.gene074034:CDS
AAGCTGGAGAGAAGAAGAGG+AGG	0.613532	5.1:-29432503	MS.gene074034:CDS
GAACAGTTCAGATATCAAGT+TGG	0.615882	5.1:-29431333	MS.gene074034:CDS
TAGATGGAAGACAAAGCAGT+TGG	0.627956	5.1:-29432340	MS.gene074034:CDS
CCTTCTGCTAGGCCTTCAGG+TGG	0.640058	5.1:-29431236	MS.gene074034:CDS
GTATGTTGGTGTGTAGAAAG+AGG	0.664598	5.1:+29431281	None:intergenic
AACCTGAACAAAGAAACAGA+AGG	0.692102	5.1:-29431377	MS.gene074034:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAAAGTACAATATATTTAAT+TGG	+	chr5.1:29431697-29431716	None:intergenic	10.0%
!!!	GTTATTATTTTTTATAACAA+TGG	-	chr5.1:29431749-29431768	MS.gene074034:intron	10.0%
!!	TTTGTAGAAATAATACTATT+TGG	-	chr5.1:29431827-29431846	MS.gene074034:intron	15.0%
!!!	AAATTATCTAATTATTGGTT+CGG	+	chr5.1:29432230-29432249	None:intergenic	15.0%
!!!	ATCTTGATTAATTTACTTTT+AGG	+	chr5.1:29431973-29431992	None:intergenic	15.0%
!!!	TTTTAATTTGTTACAGATAT+TGG	-	chr5.1:29432247-29432266	MS.gene074034:intron	15.0%
!!	TATATGGTTTCAAAATAGAA+GGG	-	chr5.1:29431315-29431334	MS.gene074034:CDS	20.0%
!!	TGAAGTGAAAATAAAATCAT+TGG	+	chr5.1:29431996-29432015	None:intergenic	20.0%
!!!	ATGAGTATGATTTTGAATTT+CGG	+	chr5.1:29431661-29431680	None:intergenic	20.0%
!!!	CTATTATATTACAGTTTTAG+AGG	-	chr5.1:29431488-29431507	MS.gene074034:intron	20.0%
!!!	TCGGTTAATTTTTTTTGTAA+CGG	+	chr5.1:29431642-29431661	None:intergenic	20.0%
!!!	TCTCTAGAAACTTTATAATA+TGG	+	chr5.1:29432076-29432095	None:intergenic	20.0%
!!!	TTAATTTACTTTTAGGTGAT+TGG	+	chr5.1:29431966-29431985	None:intergenic	20.0%
!	ATGACTTCTTTCTCTTAAAT+AGG	-	chr5.1:29432016-29432035	MS.gene074034:intron	25.0%
!	CTATATGGTTTCAAAATAGA+AGG	-	chr5.1:29431314-29431333	MS.gene074034:CDS	25.0%
!!	TAAGATGAGACATTTTTATG+TGG	+	chr5.1:29432053-29432072	None:intergenic	25.0%
!!!	TAAAGTTGATGTTAGAGAAT+AGG	+	chr5.1:29431927-29431946	None:intergenic	25.0%
	CAACGTAATTAACTGAAGTT+TGG	-	chr5.1:29431569-29431588	MS.gene074034:intron	30.0%
	CCTCAAGAACAATTATATTG+AGG	+	chr5.1:29432135-29432154	None:intergenic	30.0%
	CCTCAATATAATTGTTCTTG+AGG	-	chr5.1:29432132-29432151	MS.gene074034:intron	30.0%
	GAAGAAGATTTATCAGATGA+TGG	-	chr5.1:29431148-29431167	MS.gene074034:CDS	30.0%
	GTCTTTACATATGACAAACA+AGG	+	chr5.1:29431599-29431618	None:intergenic	30.0%
	GTTTGTCATATGTAAAGACT+TGG	-	chr5.1:29431600-29431619	MS.gene074034:intron	30.0%
	TCATCTGATAAATCTTCTTC+AGG	+	chr5.1:29431148-29431167	None:intergenic	30.0%
	TCTTTGACCATTTGAATTTC+TGG	+	chr5.1:29432500-29432519	None:intergenic	30.0%
!	AGTTTAAGCAACATGTTTTG+TGG	-	chr5.1:29432524-29432543	MS.gene074034:CDS	30.0%
!!!	AGTTTTAGAGGTTTATGCAA+CGG	-	chr5.1:29431500-29431519	MS.gene074034:intron	30.0%
	AACCATATAGCAACTTGTCT+AGG	+	chr5.1:29431304-29431323	None:intergenic	35.0%
	AACCTAGACAAGTTGCTATA+TGG	-	chr5.1:29431299-29431318	MS.gene074034:CDS	35.0%
	AACCTGAACAAAGAAACAGA+AGG	-	chr5.1:29432302-29432321	MS.gene074034:CDS	35.0%
	GAACAGTTCAGATATCAAGT+TGG	-	chr5.1:29432346-29432365	MS.gene074034:CDS	35.0%
	GATGTTAGAGAATAGGTGAA+AGG	+	chr5.1:29431920-29431939	None:intergenic	35.0%
	TAGAGAATAGGTGAAAGGAA+AGG	+	chr5.1:29431915-29431934	None:intergenic	35.0%
	TTCAAAATAGAAGGGCTAGA+TGG	-	chr5.1:29431323-29431342	MS.gene074034:CDS	35.0%
	TTCAAGGCCAGAAATTCAAA+TGG	-	chr5.1:29432490-29432509	MS.gene074034:CDS	35.0%
!	AAACCTCAGCTTGAAGTTTT+TGG	+	chr5.1:29431438-29431457	None:intergenic	35.0%
!	AAGCAACATGTTTTGTGGTA+TGG	-	chr5.1:29432529-29432548	MS.gene074034:CDS	35.0%
!	AGCTTTTCCAAACTTCTTCA+AGG	-	chr5.1:29432474-29432493	MS.gene074034:CDS	35.0%
!	ATCCTTCTGTTTCTTTGTTC+AGG	+	chr5.1:29432307-29432326	None:intergenic	35.0%
!	TTTTCATCAGGGATTGAACT+TGG	-	chr5.1:29431106-29431125	MS.gene074034:CDS	35.0%
!!	TTCAGGTTGATTGATTCTGT+TGG	+	chr5.1:29432290-29432309	None:intergenic	35.0%
!!!	CTTGAGAAGAGTTTTGAACT+TGG	-	chr5.1:29431223-29431242	MS.gene074034:CDS	35.0%
	AAATGTTGTTGCTCCAACCA+TGG	+	chr5.1:29432575-29432594	None:intergenic	40.0%
	GAACCAAAAACTTCAAGCTG+AGG	-	chr5.1:29431432-29431451	MS.gene074034:intron	40.0%
	GAAGAAGAGGAGGCTTAATA+TGG	-	chr5.1:29431186-29431205	MS.gene074034:CDS	40.0%
	GTATGTTGGTGTGTAGAAAG+AGG	+	chr5.1:29432401-29432420	None:intergenic	40.0%
	TAGATGGAAGACAAAGCAGT+TGG	-	chr5.1:29431339-29431358	MS.gene074034:CDS	40.0%
!	TGGATGATCAAGCTGGATTT+TGG	-	chr5.1:29432549-29432568	MS.gene074034:CDS	40.0%
!!	AGGTTCTGCTTGTTGTATGT+TGG	+	chr5.1:29432415-29432434	None:intergenic	40.0%
!!	TTGGTTCGGTTCTAATTTCG+TGG	+	chr5.1:29432216-29432235	None:intergenic	40.0%
!!	TTTCTGGCCTTGAAGAAGTT+TGG	+	chr5.1:29432484-29432503	None:intergenic	40.0%
	GAAAGAGGACTATCACTTGC+TGG	+	chr5.1:29432386-29432405	None:intergenic	45.0%
	GTAATAAGCTTGAGCCTGAG+AGG	-	chr5.1:29431245-29431264	MS.gene074034:CDS	45.0%
	TGTGGTATGGATGATCAAGC+TGG	-	chr5.1:29432542-29432561	MS.gene074034:CDS	45.0%
!!	ATCAAGCTGGATTTTGGCCA+TGG	-	chr5.1:29432555-29432574	MS.gene074034:CDS	45.0%
!!	TCAGATGATGGATCACAAGC+TGG	-	chr5.1:29431160-29431179	MS.gene074034:CDS	45.0%
!!	AATTAAAATTATCTAATTAT+TGG	+	chr5.1:29432235-29432254	None:intergenic	5.0%
!!!	TTATTATTTTTTATAACAAT+GGG	-	chr5.1:29431750-29431769	MS.gene074034:intron	5.0%
	AAGCTGGAGAGAAGAAGAGG+AGG	-	chr5.1:29431176-29431195	MS.gene074034:CDS	50.0%
	AGCTGAGCAATTCCACCTGA+AGG	+	chr5.1:29432458-29432477	None:intergenic	50.0%
	CACAAGCTGGAGAGAAGAAG+AGG	-	chr5.1:29431173-29431192	MS.gene074034:CDS	50.0%
	CCTAGCAGAAGGTGGAAAGA+AGG	+	chr5.1:29432435-29432454	None:intergenic	50.0%
	CCTTCTTTCCACCTTCTGCT+AGG	-	chr5.1:29432432-29432451	MS.gene074034:CDS	50.0%
!	GCAAGCTGCATTTTCCTCTC+AGG	+	chr5.1:29431262-29431281	None:intergenic	50.0%
!!	AGCTGGATTTTGGCCATGGT+TGG	-	chr5.1:29432559-29432578	MS.gene074034:CDS	50.0%
	TCGTGGCAAGAAACTGCGCA+TGG	+	chr5.1:29432199-29432218	None:intergenic	55.0%
	CCACCTGAAGGCCTAGCAGA+AGG	+	chr5.1:29432446-29432465	None:intergenic	60.0%
	CCACCTTCTGCTAGGCCTTC+AGG	-	chr5.1:29432440-29432459	MS.gene074034:CDS	60.0%
	CCTGAAGGCCTAGCAGAAGG+TGG	+	chr5.1:29432443-29432462	None:intergenic	60.0%
	CCTTCTGCTAGGCCTTCAGG+TGG	-	chr5.1:29432443-29432462	MS.gene074034:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	29431100	29432601	29431100	ID=MS.gene074034
chr5.1	mRNA	29431100	29432601	29431100	ID=MS.gene074034.t1;Parent=MS.gene074034
chr5.1	exon	29432248	29432601	29432248	ID=MS.gene074034.t1.exon1;Parent=MS.gene074034.t1
chr5.1	CDS	29432248	29432601	29432248	ID=cds.MS.gene074034.t1;Parent=MS.gene074034.t1
chr5.1	exon	29431100	29431438	29431100	ID=MS.gene074034.t1.exon2;Parent=MS.gene074034.t1
chr5.1	CDS	29431100	29431438	29431100	ID=cds.MS.gene074034.t1;Parent=MS.gene074034.t1

Gene Sequence

>MS.gene074034

ATGTCATTTTCATCAGGGATTGAACTTGGAGAAGAAGCAAATATACCTGAAGAAGATTTATCAGATGATGGATCACAAGCTGGAGAGAAGAAGAGGAGGCTTAATATGGAACAAGTGAAGACACTTGAGAAGAGTTTTGAACTTGGTAATAAGCTTGAGCCTGAGAGGAAAATGCAGCTTGCAAGAGCTCTTAACTTGCAACCTAGACAAGTTGCTATATGGTTTCAAAATAGAAGGGCTAGATGGAAGACAAAGCAGTTGGAAAAAGACTATGATGTTCTTAAAAGACAATATGATGCTATTAAGTTAGATAATGATGCACTTCAAGCTCAGAACCAAAAACTTCAAGCTGAGGTTTGTAGTTTTCTTTTAACTCATAATCATAGTTCTATTATATTACAGTTTTAGAGGTTTATGCAACGGCATGACAACTACAATTGCATTTATTTTACTGTAATGTAAAAGTTTGCAACGTAATTAACTGAAGTTTGGTGTTCCTTGTTTGTCATATGTAAAGACTTGGTTATTAATAAACTTTGCCGTTACAAAAAAAATTAACCGAAATTCAAAATCATACTCATAATAACACAATTTCCAATTAAATATATTGTACTTTAGTTGCTTGCTTTCATTTAATTTATTTGCTTGAGTTATTATTTTTTATAACAATGGGAAAAATAAATAAATGATGAAGAACTAAAGACTTGCTTGATTTTATTTTTAAACTTTTGTAGAAATAATACTATTTGGTAATGATGATACTTCTTTTTGATGTAGTTATGCTTTTTTGACTATCTGCATAGTTTTCAGAACCTTTCCTTTCACCTATTCTCTAACATCAACTTTATAAAAAGCTGCTTTTTCCAATCACCTAAAAGTAAATTAATCAAGATCCAATGATTTTATTTTCACTTCAATGACTTCTTTCTCTTAAATAGGCTACTAGTTTTCCACATAAAAATGTCTCATCTTACCATATTATAAAGTTTCTAGAGATTTAATTTTATGAAATTATCACAACTGCAATTTTGACCTCAATATAATTGTTCTTGAGGTCTTTGCAACGACATCACAACTGTAATCAATATCGTATCAGCCATGCGCAGTTTCTTGCCACGAAATTAGAACCGAACCAATAATTAGATAATTTTAATTTGTTACAGATATTGGCATTGAAAAATAGAGAACCAACAGAATCAATCAACCTGAACAAAGAAACAGAAGGATCAAGCAGCAATAGAAGTGAGAACAGTTCAGATATCAAGTTGGATATGTCAAGAACACCAGCAAGTGATAGTCCTCTTTCTACACACCAACATACAACAAGCAGAACCTTCTTTCCACCTTCTGCTAGGCCTTCAGGTGGAATTGCTCAGCTTTTCCAAACTTCTTCAAGGCCAGAAATTCAAATGGTCAAAGAAGAAAGTTTAAGCAACATGTTTTGTGGTATGGATGATCAAGCTGGATTTTGGCCATGGTTGGAGCAACAACATTTCAATTGA

Protein sequence

>MS.gene074034.t1

MSFSSGIELGEEANIPEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALNLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQYDAIKLDNDALQAQNQKLQAEILALKNREPTESINLNKETEGSSSNRSENSSDIKLDMSRTPASDSPLSTHQHTTSRTFFPPSARPSGGIAQLFQTSSRPEIQMVKEESLSNMFCGMDDQAGFWPWLEQQHFN