Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08136.t1 | AES80930.2 | 98.4 | 833 | 10 | 1 | 1 | 833 | 97 | 926 | 0.00E+00 | 1585.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08136.t1 | Q69LE7 | 78.9 | 743 | 154 | 3 | 1 | 742 | 101 | 841 | 0.0e+00 | 1171.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08136.t1 | G7L1J6 | 98.4 | 833 | 10 | 1 | 1 | 833 | 97 | 926 | 0.0e+00 | 1585.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene08136 | 0.821937 | 3.10E-53 | -1.69E-46 |
| MS.gene049369 | MS.gene08136 | 0.807427 | 5.08E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene08136 | 0.820208 | 7.75E-53 | -1.69E-46 |
| MS.gene049491 | MS.gene08136 | 0.804569 | 2.03E-49 | -1.69E-46 |
| MS.gene049614 | MS.gene08136 | 0.809679 | 1.68E-50 | -1.69E-46 |
| MS.gene050076 | MS.gene08136 | 0.807212 | 5.64E-50 | -1.69E-46 |
| MS.gene050099 | MS.gene08136 | 0.814466 | 1.52E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene08136 | 0.821782 | 3.36E-53 | -1.69E-46 |
| MS.gene050767 | MS.gene08136 | 0.867926 | 9.55E-66 | -1.69E-46 |
| MS.gene050770 | MS.gene08136 | 0.871304 | 7.57E-67 | -1.69E-46 |
| MS.gene05101 | MS.gene08136 | 0.828008 | 1.14E-54 | -1.69E-46 |
| MS.gene051228 | MS.gene08136 | 0.801619 | 8.26E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene08136 | 0.834585 | 2.75E-56 | -1.69E-46 |
| MS.gene052078 | MS.gene08136 | 0.828543 | 8.48E-55 | -1.69E-46 |
| MS.gene052178 | MS.gene08136 | 0.800117 | 1.67E-48 | -1.69E-46 |
| MS.gene052310 | MS.gene08136 | 0.838481 | 2.80E-57 | -1.69E-46 |
| MS.gene052326 | MS.gene08136 | 0.857814 | 1.26E-62 | -1.69E-46 |
| MS.gene052379 | MS.gene08136 | 0.812911 | 3.34E-51 | -1.69E-46 |
| MS.gene053322 | MS.gene08136 | 0.804464 | 2.13E-49 | -1.69E-46 |
| MS.gene053384 | MS.gene08136 | 0.820366 | 7.13E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene08136 | 0.863028 | 3.33E-64 | -1.69E-46 |
| MS.gene054376 | MS.gene08136 | 0.859068 | 5.34E-63 | -1.69E-46 |
| MS.gene05455 | MS.gene08136 | 0.84172 | 4.00E-58 | -1.69E-46 |
| MS.gene054802 | MS.gene08136 | 0.871314 | 7.51E-67 | -1.69E-46 |
| MS.gene054803 | MS.gene08136 | 0.872688 | 2.62E-67 | -1.69E-46 |
| MS.gene054804 | MS.gene08136 | 0.87371 | 1.19E-67 | -1.69E-46 |
| MS.gene055254 | MS.gene08136 | 0.82088 | 5.43E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene08136 | 0.834963 | 2.21E-56 | -1.69E-46 |
| MS.gene055390 | MS.gene08136 | 0.863995 | 1.67E-64 | -1.69E-46 |
| MS.gene055397 | MS.gene08136 | 0.846535 | 2.04E-59 | -1.69E-46 |
| MS.gene055422 | MS.gene08136 | 0.827423 | 1.58E-54 | -1.69E-46 |
| MS.gene055499 | MS.gene08136 | 0.824058 | 9.91E-54 | -1.69E-46 |
| MS.gene055636 | MS.gene08136 | 0.810628 | 1.05E-50 | -1.69E-46 |
| MS.gene055896 | MS.gene08136 | 0.848261 | 6.86E-60 | -1.69E-46 |
| MS.gene055930 | MS.gene08136 | 0.830164 | 3.43E-55 | -1.69E-46 |
| MS.gene056410 | MS.gene08136 | 0.831015 | 2.12E-55 | -1.69E-46 |
| MS.gene056609 | MS.gene08136 | 0.855018 | 8.36E-62 | -1.69E-46 |
| MS.gene057129 | MS.gene08136 | 0.831829 | 1.34E-55 | -1.69E-46 |
| MS.gene057295 | MS.gene08136 | 0.81631 | 5.91E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene08136 | 0.821021 | 5.04E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene08136 | 0.840768 | 7.12E-58 | -1.69E-46 |
| MS.gene058660 | MS.gene08136 | 0.855381 | 6.55E-62 | -1.69E-46 |
| MS.gene058993 | MS.gene08136 | 0.801632 | 8.22E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene08136 | 0.819254 | 1.28E-52 | -1.69E-46 |
| MS.gene059326 | MS.gene08136 | 0.840193 | 1.01E-57 | -1.69E-46 |
| MS.gene059597 | MS.gene08136 | 0.815968 | 7.04E-52 | -1.69E-46 |
| MS.gene05959 | MS.gene08136 | 0.835152 | 1.98E-56 | -1.69E-46 |
| MS.gene059676 | MS.gene08136 | 0.844653 | 6.62E-59 | -1.69E-46 |
| MS.gene059708 | MS.gene08136 | 0.861765 | 8.15E-64 | -1.69E-46 |
| MS.gene059960 | MS.gene08136 | 0.86223 | 5.87E-64 | -1.69E-46 |
| MS.gene060005 | MS.gene08136 | 0.822294 | 2.56E-53 | -1.69E-46 |
| MS.gene06037 | MS.gene08136 | 0.808474 | 3.04E-50 | -1.69E-46 |
| MS.gene060818 | MS.gene08136 | 0.822046 | 2.92E-53 | -1.69E-46 |
| MS.gene06090 | MS.gene08136 | 0.800783 | 1.23E-48 | -1.69E-46 |
| MS.gene061041 | MS.gene08136 | 0.805217 | 1.49E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene08136 | -0.813141 | 2.97E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene08136 | 0.855629 | 5.55E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08136.t1 | MTR_7g086640 | 98.439 | 833 | 10 | 1 | 1 | 833 | 97 | 926 | 0.0 | 1662 |
| MS.gene08136.t1 | MTR_6g005460 | 34.724 | 743 | 422 | 13 | 1 | 736 | 55 | 741 | 2.76e-123 | 395 |
| MS.gene08136.t1 | MTR_7g116920 | 25.714 | 245 | 163 | 6 | 347 | 589 | 8 | 235 | 3.59e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08136.t1 | AT3G03710 | 72.792 | 838 | 206 | 6 | 1 | 833 | 99 | 919 | 0.0 | 1205 |
| MS.gene08136.t1 | AT5G14580 | 36.968 | 752 | 412 | 13 | 4 | 750 | 67 | 761 | 1.08e-137 | 434 |
| MS.gene08136.t1 | AT2G47220 | 80.769 | 78 | 14 | 1 | 1 | 77 | 31 | 108 | 2.89e-34 | 137 |
Find 193 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGGAGATATGGACTTTA+AGG | 0.129280 | 7.2:+21157084 | MS.gene08136:CDS |
| GATGAAAGGGCTTTCCTTCT+TGG | 0.191181 | 7.2:-21152649 | None:intergenic |
| TCAGTTGAATTTGAATTATC+TGG | 0.191747 | 7.2:-21165246 | None:intergenic |
| GTTCTTGATACCAAGGAATT+TGG | 0.197589 | 7.2:+21157010 | MS.gene08136:CDS |
| AAGCCACAGCTTGAGTTAAT+TGG | 0.228853 | 7.2:-21154332 | None:intergenic |
| GATAAAATAAATCTTATAAT+TGG | 0.231659 | 7.2:+21161516 | MS.gene08136:CDS |
| TGCATTTCAGATGGACATTA+AGG | 0.254453 | 7.2:+21159442 | MS.gene08136:CDS |
| GCTTTAAGTAGCTTCTCTTC+TGG | 0.262614 | 7.2:-21150913 | None:intergenic |
| CGTTTCCTCCTTCATGTGTT+GGG | 0.301280 | 7.2:+21156413 | MS.gene08136:CDS |
| TTGACAATGGTTCCAACTAT+TGG | 0.318776 | 7.2:+21161771 | MS.gene08136:CDS |
| GAAAATATTTGCGAGAGATT+TGG | 0.321372 | 7.2:+21161713 | MS.gene08136:CDS |
| CTTATTCTGTCCGACATAAC+TGG | 0.336072 | 7.2:+21157049 | MS.gene08136:CDS |
| TTCAACTGATAAGGGTTCAT+TGG | 0.344987 | 7.2:+21165260 | MS.gene08136:CDS |
| CTTTAAGTAGCTTCTCTTCT+GGG | 0.345776 | 7.2:-21150912 | None:intergenic |
| TTAATTGGACGAATTTCATT+TGG | 0.346612 | 7.2:-21154317 | None:intergenic |
| TAATTGGACGAATTTCATTT+GGG | 0.348167 | 7.2:-21154316 | None:intergenic |
| TTATTTGTAGATTGATTGAT+AGG | 0.349222 | 7.2:+21148949 | MS.gene08136:CDS |
| AAGACAATATTTGAGTTTCA+TGG | 0.351241 | 7.2:-21149004 | None:intergenic |
| CTTAAGATACTTTCAGAGAA+TGG | 0.358131 | 7.2:+21152688 | MS.gene08136:CDS |
| CACATTAGTGAACTGAGTTC+AGG | 0.362235 | 7.2:+21164062 | MS.gene08136:CDS |
| GCTTGCCTCCTCCAGCAAAA+AGG | 0.363438 | 7.2:+21161328 | MS.gene08136:CDS |
| CCTATCAAGTCCTCGATTGC+TGG | 0.374212 | 7.2:+21156971 | MS.gene08136:CDS |
| TAATTCAAATTCAACTGATA+AGG | 0.379211 | 7.2:+21165251 | MS.gene08136:CDS |
| TTTGGTTGAGACTGGTCATA+TGG | 0.379849 | 7.2:+21147354 | MS.gene08136:CDS |
| CATGTGTTGGGGAGGTTGGC+CGG | 0.379966 | 7.2:+21156425 | MS.gene08136:CDS |
| ATAAATCTTATAATTGGTTC+CGG | 0.382883 | 7.2:+21161522 | MS.gene08136:CDS |
| GTTGGGGAGGTTGGCCGGAT+TGG | 0.387798 | 7.2:+21156430 | MS.gene08136:CDS |
| CGCGTTGGTTTCCGTGGGGT+TGG | 0.393171 | 7.2:-21152838 | None:intergenic |
| TGCTTAGCATTGCAAGATGC+TGG | 0.393547 | 7.2:+21156944 | MS.gene08136:CDS |
| CAACTATTGGTGATATATAT+AGG | 0.393918 | 7.2:+21161784 | MS.gene08136:CDS |
| TGCTGGAATTGCAATGGGTT+TGG | 0.395232 | 7.2:+21156988 | MS.gene08136:CDS |
| GGCTAGTTTAGAGATGTCTA+AGG | 0.396612 | 7.2:+21161734 | MS.gene08136:CDS |
| CTTCCCACATTTCTTAACTA+AGG | 0.399629 | 7.2:-21151583 | None:intergenic |
| AATTCAAATTCAACTGATAA+GGG | 0.400775 | 7.2:+21165252 | MS.gene08136:CDS |
| GCACCGAGTAGAAGAGAAAT+TGG | 0.401167 | 7.2:+21156454 | MS.gene08136:CDS |
| TGCAGTGACAGCCAAGGAAT+CGG | 0.404139 | 7.2:-21149804 | None:intergenic |
| TGAAGATGCATCTGGAGATA+TGG | 0.404354 | 7.2:+21157075 | MS.gene08136:CDS |
| TTAAGATACTTTCAGAGAAT+GGG | 0.404443 | 7.2:+21152689 | MS.gene08136:CDS |
| TGTGTACACCACTGTTTGTT+TGG | 0.407615 | 7.2:+21148527 | MS.gene08136:CDS |
| ATCTTGTCTTTGTTCGTGAC+AGG | 0.410660 | 7.2:-21165453 | None:intergenic |
| GGAGTTCGAGTTGGCCTTGT+TGG | 0.411869 | 7.2:+21150156 | MS.gene08136:CDS |
| GCTATTGATACTGAAGATAA+TGG | 0.413604 | 7.2:+21161588 | MS.gene08136:CDS |
| ACAACGAATAGACAATCTTA+TGG | 0.414678 | 7.2:+21155370 | MS.gene08136:CDS |
| CCTTTCATCGTTAGAAGAAA+AGG | 0.419679 | 7.2:+21152663 | MS.gene08136:CDS |
| CCTTCATGTGTTGGGGAGGT+TGG | 0.427300 | 7.2:+21156421 | MS.gene08136:CDS |
| TATTGATGTAAAACTTATAG+AGG | 0.428749 | 7.2:+21164262 | MS.gene08136:CDS |
| CAACTAAACCAGCATTTGTC+AGG | 0.429599 | 7.2:-21165296 | None:intergenic |
| CTCTCAACACGAATAGTGTA+AGG | 0.430149 | 7.2:-21156535 | None:intergenic |
| GCTTAGCATTGCAAGATGCT+GGG | 0.430496 | 7.2:+21156945 | MS.gene08136:CDS |
| TCCTTGGCTGTCACTGCAGC+TGG | 0.430502 | 7.2:+21149809 | MS.gene08136:CDS |
| GAATTATCTGGATCTGCATC+AGG | 0.433159 | 7.2:-21165234 | None:intergenic |
| TTCTGAGGTAGATGTGAAGT+TGG | 0.433258 | 7.2:+21154024 | MS.gene08136:CDS |
| GCAGTGACAGCCAAGGAATC+GGG | 0.436723 | 7.2:-21149803 | None:intergenic |
| ATCTCTACAAACGCTCCATA+TGG | 0.437468 | 7.2:-21163747 | None:intergenic |
| ATGAAACTCAAATATTGTCT+TGG | 0.437637 | 7.2:+21149006 | MS.gene08136:CDS |
| CTCTTGATAATTCACAGAAA+GGG | 0.438673 | 7.2:-21148583 | None:intergenic |
| TCGTTTCCTCCTTCATGTGT+TGG | 0.439502 | 7.2:+21156412 | MS.gene08136:CDS |
| TCGCTAGCTGTTGCTACGCT+TGG | 0.440720 | 7.2:+21155332 | MS.gene08136:CDS |
| CTCAGGAGGAGGCAACTTGA+TGG | 0.445249 | 7.2:-21151622 | None:intergenic |
| TCGATTGCTGGAATTGCAAT+GGG | 0.446632 | 7.2:+21156983 | MS.gene08136:CDS |
| AATGATATGATGCAGGTTGC+TGG | 0.448258 | 7.2:+21159401 | MS.gene08136:intron |
| CCAGCAATCGAGGACTTGAT+AGG | 0.451046 | 7.2:-21156971 | None:intergenic |
| ATCAAATCAATAGTTCCATA+TGG | 0.452775 | 7.2:+21163732 | MS.gene08136:CDS |
| CCCACGTCAAAAGCAGTTGC+TGG | 0.453846 | 7.2:+21150135 | MS.gene08136:CDS |
| AAGAGCATTATTGAGCAATC+TGG | 0.454272 | 7.2:+21161558 | MS.gene08136:CDS |
| GTGAATCAGAGGAGCATACT+TGG | 0.457219 | 7.2:-21161355 | None:intergenic |
| ATGGTTTCAGCATTATTCCT+TGG | 0.458148 | 7.2:-21152733 | None:intergenic |
| CAGAAGGCAAAATTGTTTCA+AGG | 0.461946 | 7.2:-21156501 | None:intergenic |
| TGAAACTCAAATATTGTCTT+GGG | 0.462092 | 7.2:+21149007 | MS.gene08136:CDS |
| TCCATCTCCACCAAATTCCT+TGG | 0.464849 | 7.2:-21157020 | None:intergenic |
| GATGAAGAAGTAATTGTTGA+TGG | 0.466927 | 7.2:+21152784 | MS.gene08136:CDS |
| TAAAGCTGTAGAAGTTGGTC+AGG | 0.468201 | 7.2:+21150930 | MS.gene08136:CDS |
| ACCAAGGAATTTGGTGGAGA+TGG | 0.472242 | 7.2:+21157019 | MS.gene08136:CDS |
| AGAGCACTTCCATGTGCTCT+AGG | 0.473089 | 7.2:-21154359 | None:intergenic |
| GAGTTGGACCTCATGCTGGC+TGG | 0.474204 | 7.2:+21150225 | MS.gene08136:CDS |
| AAGTGGTTCTGTTACAGTTA+CGG | 0.474887 | 7.2:+21147387 | MS.gene08136:CDS |
| ACTGGATCTGAAGATGCATC+TGG | 0.477890 | 7.2:+21157067 | MS.gene08136:CDS |
| ATTGCATATCCCCGATTCCT+TGG | 0.479146 | 7.2:+21149793 | MS.gene08136:CDS |
| CTCGATTGCTGGAATTGCAA+TGG | 0.484276 | 7.2:+21156982 | MS.gene08136:CDS |
| CATGAGAGAAGCACTGCTGC+AGG | 0.484803 | 7.2:+21159828 | MS.gene08136:CDS |
| CGCAGAGATTCTTGAGGACG+AGG | 0.487704 | 7.2:+21152756 | MS.gene08136:CDS |
| TCTGCGTCCTACTATGCCTA+AGG | 0.488115 | 7.2:+21148974 | MS.gene08136:CDS |
| GAAGCCTTAGTTAAGAAATG+TGG | 0.488759 | 7.2:+21151579 | MS.gene08136:CDS |
| GTTATCAGCCTGACAAATGC+TGG | 0.493637 | 7.2:+21165288 | MS.gene08136:CDS |
| ACTAAACGCGTTGGTTTCCG+TGG | 0.493937 | 7.2:-21152844 | None:intergenic |
| AAATCCTACTTCTGAGGAGA+TGG | 0.495458 | 7.2:+21150194 | MS.gene08136:CDS |
| GTTTCATGGTAGAAGCCCTT+AGG | 0.496080 | 7.2:-21148990 | None:intergenic |
| CTCTGAGTTGGACCTCATGC+TGG | 0.496592 | 7.2:+21150221 | MS.gene08136:CDS |
| GCATGTGACAGGGTGGGAAA+AGG | 0.500077 | 7.2:+21154279 | MS.gene08136:intron |
| CTACTTAAAGCTGTAGAAGT+TGG | 0.502196 | 7.2:+21150925 | MS.gene08136:CDS |
| TTTCTGCCGCTGGTCGCACT+AGG | 0.502692 | 7.2:+21148610 | MS.gene08136:CDS |
| TAGAAGCCCTTAGGCATAGT+AGG | 0.503563 | 7.2:-21148981 | None:intergenic |
| TTACAAGAGGTTCTATCTGC+AGG | 0.503936 | 7.2:+21155403 | MS.gene08136:CDS |
| TATTGAGCAATCTGGAATAG+AGG | 0.507204 | 7.2:+21161566 | MS.gene08136:CDS |
| TCAACATGTTTATAAAGCTC+AGG | 0.508267 | 7.2:-21151639 | None:intergenic |
| CTTGATACCAAGGAATTTGG+TGG | 0.514317 | 7.2:+21157013 | MS.gene08136:CDS |
| TCCTCTGATTCACGTTATGA+AGG | 0.515651 | 7.2:+21161365 | MS.gene08136:CDS |
| TTCTACTCGGTGCACCAATC+CGG | 0.516529 | 7.2:-21156444 | None:intergenic |
| CACAGCATGGCATCTGTTTG+TGG | 0.518135 | 7.2:+21156917 | MS.gene08136:intron |
| GCTCTTGATAATTCACAGAA+AGG | 0.523392 | 7.2:-21148584 | None:intergenic |
| GGAGATGGAAAACTCTGAGT+TGG | 0.523459 | 7.2:+21150209 | MS.gene08136:CDS |
| GGACCTCATGCTGGCTGGCA+CGG | 0.523923 | 7.2:+21150230 | MS.gene08136:CDS |
| CTATATATATCACCAATAGT+TGG | 0.524102 | 7.2:-21161783 | None:intergenic |
| ATCTTATAATTGGTTCCGGC+GGG | 0.525663 | 7.2:+21161526 | MS.gene08136:CDS |
| AAGGCAAAACCTCATCGAAA+AGG | 0.525725 | 7.2:+21165358 | MS.gene08136:CDS |
| TTAAATAATTTAGGTCAGAC+CGG | 0.528847 | 7.2:+21161494 | MS.gene08136:intron |
| CCAACCTCCCCAACACATGA+AGG | 0.529022 | 7.2:-21156421 | None:intergenic |
| GTTAATATGCAGGAAATCGC+TGG | 0.529795 | 7.2:+21152586 | MS.gene08136:intron |
| GCTAAGGTAAACACCCGTAA+AGG | 0.531828 | 7.2:+21165339 | MS.gene08136:CDS |
| CAGCAGTGCTTCTCTCATGA+TGG | 0.533550 | 7.2:-21159824 | None:intergenic |
| AGAAGGCAAAATTGTTTCAA+GGG | 0.536176 | 7.2:-21156500 | None:intergenic |
| CAGAAAGCAATGGCTCTTCG+AGG | 0.537697 | 7.2:+21156566 | MS.gene08136:CDS |
| GTTTCCTCCTTCATGTGTTG+GGG | 0.538309 | 7.2:+21156414 | MS.gene08136:CDS |
| TTTGAGGAAACGTATAGTAG+AGG | 0.539179 | 7.2:+21154072 | MS.gene08136:CDS |
| TCCTCCTTCATGTGTTGGGG+AGG | 0.541021 | 7.2:+21156417 | MS.gene08136:CDS |
| CTAAACGCGTTGGTTTCCGT+GGG | 0.541130 | 7.2:-21152843 | None:intergenic |
| TTGGTTGAGACTGGTCATAT+GGG | 0.547677 | 7.2:+21147355 | MS.gene08136:CDS |
| TGAGCTTTATAAACATGTTG+AGG | 0.555254 | 7.2:+21151641 | MS.gene08136:CDS |
| CTTAGCATTGCAAGATGCTG+GGG | 0.556255 | 7.2:+21156946 | MS.gene08136:CDS |
| TAGTGCAATATTGATGATAG+AGG | 0.557497 | 7.2:+21150254 | MS.gene08136:CDS |
| CAGGGTGGGAAAAGGAGCGA+TGG | 0.562775 | 7.2:+21154287 | MS.gene08136:intron |
| GGGTTTGGTTCTTGATACCA+AGG | 0.569830 | 7.2:+21157003 | MS.gene08136:CDS |
| ATGATATGATGCAGGTTGCT+GGG | 0.570640 | 7.2:+21159402 | MS.gene08136:intron |
| TGACCAATTTCTCTTCTACT+CGG | 0.571061 | 7.2:-21156457 | None:intergenic |
| AATCTTATAATTGGTTCCGG+CGG | 0.571340 | 7.2:+21161525 | MS.gene08136:CDS |
| GTTGATGGTGAAGTTGATGA+AGG | 0.574671 | 7.2:+21152799 | MS.gene08136:CDS |
| GCAGTTGCTGGAGTTCGAGT+TGG | 0.574945 | 7.2:+21150147 | MS.gene08136:CDS |
| CAGGTTGCTGGGAATGAAGA+TGG | 0.575114 | 7.2:+21159413 | MS.gene08136:intron |
| AAGCCTTAGTTAAGAAATGT+GGG | 0.576353 | 7.2:+21151580 | MS.gene08136:CDS |
| AGGGTGGGAAAAGGAGCGAT+GGG | 0.577844 | 7.2:+21154288 | MS.gene08136:intron |
| GTTCGTGACAGGCTTATCCT+CGG | 0.578484 | 7.2:-21165442 | None:intergenic |
| TGGCATAACTGCATTTCAGA+TGG | 0.581349 | 7.2:+21159433 | MS.gene08136:CDS |
| CGTCCAATTAACTCAAGCTG+TGG | 0.581642 | 7.2:+21154329 | MS.gene08136:CDS |
| GTCCTCAAGAATCTCTGCGA+TGG | 0.581667 | 7.2:-21152752 | None:intergenic |
| AAAGTATGTACCTCTCGTCC+CGG | 0.582212 | 7.2:-21163774 | None:intergenic |
| GAAAACTGAACAGAATGCTA+AGG | 0.582359 | 7.2:+21165323 | MS.gene08136:CDS |
| TATAGTAAATCCTACTTCTG+AGG | 0.583150 | 7.2:+21150188 | MS.gene08136:CDS |
| GCACTGCTGCAGGCAAAAGA+CGG | 0.584735 | 7.2:+21159838 | MS.gene08136:CDS |
| CTGCATCAGGAAGCAGTGCT+CGG | 0.586287 | 7.2:-21165221 | None:intergenic |
| TATCATTAGTAATTTGACAA+TGG | 0.588966 | 7.2:+21161758 | MS.gene08136:CDS |
| TCTTGATAATTCACAGAAAG+GGG | 0.592284 | 7.2:-21148582 | None:intergenic |
| GGTTCTGTTACAGTTACGGA+TGG | 0.596302 | 7.2:+21147391 | MS.gene08136:CDS |
| TATCCGTGCCAGCCAGCATG+AGG | 0.596655 | 7.2:-21150233 | None:intergenic |
| TAAACGAGAAGGAAAGACAA+AGG | 0.596829 | 7.2:+21148708 | MS.gene08136:CDS |
| TGTTTATAAAGCTCAGGAGG+AGG | 0.597536 | 7.2:-21151633 | None:intergenic |
| ATCTTCAGATCCAGTTATGT+CGG | 0.597877 | 7.2:-21157059 | None:intergenic |
| TGCTGCAGGCAAAAGACGGA+AGG | 0.601312 | 7.2:+21159842 | MS.gene08136:CDS |
| ACCTTCATAACGTGAATCAG+AGG | 0.603485 | 7.2:-21161366 | None:intergenic |
| TAAGGGAAATCACTATCAGA+AGG | 0.603872 | 7.2:-21156517 | None:intergenic |
| ACCAGCTGCAGTGACAGCCA+AGG | 0.605652 | 7.2:-21149810 | None:intergenic |
| CATTGCAATTCCAGCAATCG+AGG | 0.607395 | 7.2:-21156981 | None:intergenic |
| AGTAGAAGAGAAATTGGTCA+CGG | 0.609345 | 7.2:+21156460 | MS.gene08136:CDS |
| CTATATACTTGTCACCAACA+AGG | 0.609540 | 7.2:-21150170 | None:intergenic |
| TTAGAAACAAAATACCAAGA+AGG | 0.610216 | 7.2:+21152635 | MS.gene08136:CDS |
| CTGCGTCCTACTATGCCTAA+GGG | 0.611399 | 7.2:+21148975 | MS.gene08136:CDS |
| GGCTTATTACCTAGAGCACA+TGG | 0.613061 | 7.2:+21154350 | MS.gene08136:CDS |
| CTGAACTCAGTTCACTAATG+TGG | 0.613087 | 7.2:-21164061 | None:intergenic |
| GGAAATCGCTGGTGATGAGT+TGG | 0.615709 | 7.2:+21152597 | MS.gene08136:intron |
| AGGAAAGACAAAGGATCATG+AGG | 0.620066 | 7.2:+21148717 | MS.gene08136:CDS |
| AGCGTTTGTAGAGATAGCAC+CGG | 0.621194 | 7.2:+21163755 | MS.gene08136:CDS |
| GTAGAAGAGAAATTGGTCAC+GGG | 0.622598 | 7.2:+21156461 | MS.gene08136:CDS |
| TTGAGACTGGTCATATGGGA+AGG | 0.626257 | 7.2:+21147359 | MS.gene08136:CDS |
| AGCATGGCATCTGTTTGTGG+AGG | 0.626639 | 7.2:+21156920 | MS.gene08136:intron |
| AATTGGACGAATTTCATTTG+GGG | 0.629216 | 7.2:-21154315 | None:intergenic |
| TTCATATAAAGCCAACCCCA+CGG | 0.629572 | 7.2:+21152827 | MS.gene08136:CDS |
| GCGTTTGTAGAGATAGCACC+GGG | 0.630733 | 7.2:+21163756 | MS.gene08136:CDS |
| GTGGTGCTTACTAAACGCGT+TGG | 0.631510 | 7.2:-21152853 | None:intergenic |
| TGGATGTTGATGATTACAAG+AGG | 0.640234 | 7.2:+21155390 | MS.gene08136:CDS |
| TGCGCTGCAGATAAATGACA+AGG | 0.643501 | 7.2:+21165179 | MS.gene08136:intron |
| AGTGCGAGCAATCTGTAATG+AGG | 0.643613 | 7.2:+21151554 | MS.gene08136:CDS |
| ACATGTTTATAAAGCTCAGG+AGG | 0.646335 | 7.2:-21151636 | None:intergenic |
| AATATCATCCAAACAAACAG+TGG | 0.649281 | 7.2:-21148535 | None:intergenic |
| AGAGATAGCACCGGGACGAG+AGG | 0.650207 | 7.2:+21163764 | MS.gene08136:CDS |
| TCACAAATGATACTGCTCCA+AGG | 0.650362 | 7.2:+21152716 | MS.gene08136:CDS |
| GTATCAGTATTACAGGTGGG+TGG | 0.650643 | 7.2:+21159790 | MS.gene08136:intron |
| GACGGAAGGAAACATATACT+CGG | 0.650660 | 7.2:+21159856 | MS.gene08136:CDS |
| TTAGTGAACTGAGTTCAGGT+TGG | 0.655843 | 7.2:+21164066 | MS.gene08136:CDS |
| AGTACTATCACAGAAAGCAA+TGG | 0.656352 | 7.2:+21156556 | MS.gene08136:CDS |
| CAGTGACAGCCAAGGAATCG+GGG | 0.657199 | 7.2:-21149802 | None:intergenic |
| TCTCAACACGAATAGTGTAA+GGG | 0.657446 | 7.2:-21156534 | None:intergenic |
| GAGATCGGTCAGCTCTTCCG+AGG | 0.662555 | 7.2:+21165425 | MS.gene08136:CDS |
| AACCATCGCAGAGATTCTTG+AGG | 0.668422 | 7.2:+21152750 | MS.gene08136:CDS |
| TACGCTTGGAGATAACAAGA+TGG | 0.675088 | 7.2:+21155346 | MS.gene08136:CDS |
| GTTATGTCGGACAGAATAAG+CGG | 0.679962 | 7.2:-21157046 | None:intergenic |
| CATATGGGAAGGCAAGCAAG+TGG | 0.683058 | 7.2:+21147370 | MS.gene08136:CDS |
| GCAGTGCTCGGTGACTAAGA+CGG | 0.685802 | 7.2:-21165209 | None:intergenic |
| AAAGACAAGATAAATAAGAG+CGG | 0.686522 | 7.2:+21165465 | MS.gene08136:CDS |
| CTTGATAATTCACAGAAAGG+GGG | 0.692656 | 7.2:-21148581 | None:intergenic |
| TAAACGCGTTGGTTTCCGTG+GGG | 0.702525 | 7.2:-21152842 | None:intergenic |
| ACCTCCCCAACACATGAAGG+AGG | 0.703173 | 7.2:-21156418 | None:intergenic |
| GCGCTGCAGATAAATGACAA+GGG | 0.713540 | 7.2:+21165180 | MS.gene08136:intron |
| GGCATACCTAGTGCGACCAG+CGG | 0.717125 | 7.2:-21148616 | None:intergenic |
| TTAGGCATAGTAGGACGCAG+AGG | 0.735674 | 7.2:-21148972 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 21147352 | 21165527 | 21147352 | ID=MS.gene08136 |
| chr7.2 | mRNA | 21147352 | 21165527 | 21147352 | ID=MS.gene08136.t1;Parent=MS.gene08136 |
| chr7.2 | exon | 21147352 | 21147420 | 21147352 | ID=MS.gene08136.t1.exon1;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21147352 | 21147420 | 21147352 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21148525 | 21148631 | 21148525 | ID=MS.gene08136.t1.exon2;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21148525 | 21148631 | 21148525 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21148696 | 21148738 | 21148696 | ID=MS.gene08136.t1.exon3;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21148696 | 21148738 | 21148696 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21148945 | 21149028 | 21148945 | ID=MS.gene08136.t1.exon4;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21148945 | 21149028 | 21148945 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21149776 | 21149840 | 21149776 | ID=MS.gene08136.t1.exon5;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21149776 | 21149840 | 21149776 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21150119 | 21150275 | 21150119 | ID=MS.gene08136.t1.exon6;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21150119 | 21150275 | 21150119 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21150895 | 21150951 | 21150895 | ID=MS.gene08136.t1.exon7;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21150895 | 21150951 | 21150895 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21151549 | 21151662 | 21151549 | ID=MS.gene08136.t1.exon8;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21151549 | 21151662 | 21151549 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21152598 | 21152864 | 21152598 | ID=MS.gene08136.t1.exon9;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21152598 | 21152864 | 21152598 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21154022 | 21154093 | 21154022 | ID=MS.gene08136.t1.exon10;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21154022 | 21154093 | 21154022 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21154290 | 21154403 | 21154290 | ID=MS.gene08136.t1.exon11;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21154290 | 21154403 | 21154290 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21155332 | 21155424 | 21155332 | ID=MS.gene08136.t1.exon12;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21155332 | 21155424 | 21155332 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21156409 | 21156587 | 21156409 | ID=MS.gene08136.t1.exon13;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21156409 | 21156587 | 21156409 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21156922 | 21157105 | 21156922 | ID=MS.gene08136.t1.exon14;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21156922 | 21157105 | 21156922 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21159416 | 21159463 | 21159416 | ID=MS.gene08136.t1.exon15;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21159416 | 21159463 | 21159416 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21159805 | 21159877 | 21159805 | ID=MS.gene08136.t1.exon16;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21159805 | 21159877 | 21159805 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21161313 | 21161386 | 21161313 | ID=MS.gene08136.t1.exon17;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21161313 | 21161386 | 21161313 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21161507 | 21161614 | 21161507 | ID=MS.gene08136.t1.exon18;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21161507 | 21161614 | 21161507 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21161711 | 21161805 | 21161711 | ID=MS.gene08136.t1.exon19;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21161711 | 21161805 | 21161711 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21163722 | 21163785 | 21163722 | ID=MS.gene08136.t1.exon20;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21163722 | 21163785 | 21163722 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21164053 | 21164106 | 21164053 | ID=MS.gene08136.t1.exon21;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21164053 | 21164106 | 21164053 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21164242 | 21164283 | 21164242 | ID=MS.gene08136.t1.exon22;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21164242 | 21164283 | 21164242 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| chr7.2 | exon | 21165189 | 21165527 | 21165189 | ID=MS.gene08136.t1.exon23;Parent=MS.gene08136.t1 |
| chr7.2 | CDS | 21165189 | 21165527 | 21165189 | ID=cds.MS.gene08136.t1;Parent=MS.gene08136.t1 |
| Gene Sequence |
| Protein sequence |
