Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09240.t1 | PNX80967.1 | 80.6 | 36 | 7 | 0 | 1 | 36 | 3 | 38 | 1.00E-06 | 64.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09240.t1 | A0A2K3LR28 | 80.6 | 36 | 7 | 0 | 1 | 36 | 3 | 38 | 7.5e-07 | 64.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene09240 | 0.812894 | 3.37E-51 | -1.69E-46 |
MS.gene049159 | MS.gene09240 | 0.836112 | 1.13E-56 | -1.69E-46 |
MS.gene049501 | MS.gene09240 | 0.800382 | 1.48E-48 | -1.69E-46 |
MS.gene049825 | MS.gene09240 | 0.803078 | 4.14E-49 | -1.69E-46 |
MS.gene050303 | MS.gene09240 | 0.814129 | 1.80E-51 | -1.69E-46 |
MS.gene050719 | MS.gene09240 | 0.808091 | 3.67E-50 | -1.69E-46 |
MS.gene050721 | MS.gene09240 | 0.81183 | 5.75E-51 | -1.69E-46 |
MS.gene050815 | MS.gene09240 | 0.800627 | 1.32E-48 | -1.69E-46 |
MS.gene050844 | MS.gene09240 | 0.819814 | 9.53E-53 | -1.69E-46 |
MS.gene051210 | MS.gene09240 | 0.821134 | 4.74E-53 | -1.69E-46 |
MS.gene051247 | MS.gene09240 | 0.816086 | 6.63E-52 | -1.69E-46 |
MS.gene051452 | MS.gene09240 | 0.803309 | 3.71E-49 | -1.69E-46 |
MS.gene052012 | MS.gene09240 | 0.846509 | 2.08E-59 | -1.69E-46 |
MS.gene052519 | MS.gene09240 | 0.825503 | 4.52E-54 | -1.69E-46 |
MS.gene052611 | MS.gene09240 | 0.804168 | 2.46E-49 | -1.69E-46 |
MS.gene052863 | MS.gene09240 | 0.828695 | 7.79E-55 | -1.69E-46 |
MS.gene052896 | MS.gene09240 | 0.818153 | 2.27E-52 | -1.69E-46 |
MS.gene053008 | MS.gene09240 | 0.836514 | 8.95E-57 | -1.69E-46 |
MS.gene053226 | MS.gene09240 | 0.831486 | 1.62E-55 | -1.69E-46 |
MS.gene05364 | MS.gene09240 | 0.803784 | 2.96E-49 | -1.69E-46 |
MS.gene054472 | MS.gene09240 | 0.808562 | 2.91E-50 | -1.69E-46 |
MS.gene05468 | MS.gene09240 | 0.809014 | 2.33E-50 | -1.69E-46 |
MS.gene05517 | MS.gene09240 | 0.806979 | 6.32E-50 | -1.69E-46 |
MS.gene055363 | MS.gene09240 | 0.812853 | 3.44E-51 | -1.69E-46 |
MS.gene055466 | MS.gene09240 | 0.80007 | 1.71E-48 | -1.69E-46 |
MS.gene055623 | MS.gene09240 | 0.834323 | 3.20E-56 | -1.69E-46 |
MS.gene055818 | MS.gene09240 | 0.825914 | 3.62E-54 | -1.69E-46 |
MS.gene057026 | MS.gene09240 | 0.808274 | 3.36E-50 | -1.69E-46 |
MS.gene057140 | MS.gene09240 | 0.821437 | 4.04E-53 | -1.69E-46 |
MS.gene057693 | MS.gene09240 | 0.806679 | 7.32E-50 | -1.69E-46 |
MS.gene057915 | MS.gene09240 | 0.810747 | 9.88E-51 | -1.69E-46 |
MS.gene058084 | MS.gene09240 | 0.804645 | 1.96E-49 | -1.69E-46 |
MS.gene058548 | MS.gene09240 | 0.808971 | 2.38E-50 | -1.69E-46 |
MS.gene058625 | MS.gene09240 | 0.810575 | 1.08E-50 | -1.69E-46 |
MS.gene05979 | MS.gene09240 | 0.808322 | 3.28E-50 | -1.69E-46 |
MS.gene059830 | MS.gene09240 | 0.80048 | 1.41E-48 | -1.69E-46 |
MS.gene059842 | MS.gene09240 | 0.819122 | 1.37E-52 | -1.69E-46 |
MS.gene060322 | MS.gene09240 | 0.821408 | 4.10E-53 | -1.69E-46 |
MS.gene060429 | MS.gene09240 | 0.8027 | 4.95E-49 | -1.69E-46 |
MS.gene060572 | MS.gene09240 | 0.819322 | 1.23E-52 | -1.69E-46 |
MS.gene060803 | MS.gene09240 | 0.824917 | 6.23E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09240.t1 | MTR_8g080860 | 97.818 | 275 | 6 | 0 | 10 | 284 | 9 | 283 | 0.0 | 529 |
MS.gene09240.t1 | MTR_8g080860 | 97.818 | 275 | 6 | 0 | 10 | 284 | 13 | 287 | 0.0 | 528 |
MS.gene09240.t1 | MTR_8g092090 | 54.864 | 257 | 100 | 2 | 13 | 268 | 5 | 246 | 2.25e-86 | 258 |
MS.gene09240.t1 | MTR_8g095240 | 51.748 | 286 | 104 | 2 | 17 | 268 | 50 | 335 | 1.95e-83 | 257 |
MS.gene09240.t1 | MTR_8g095240 | 50.350 | 286 | 108 | 2 | 15 | 266 | 2 | 287 | 3.34e-81 | 251 |
MS.gene09240.t1 | MTR_8g095240 | 42.324 | 241 | 105 | 2 | 60 | 266 | 1 | 241 | 9.47e-50 | 170 |
MS.gene09240.t1 | MTR_8g095240 | 38.636 | 220 | 101 | 3 | 16 | 201 | 118 | 337 | 3.70e-34 | 128 |
MS.gene09240.t1 | MTR_4g107460 | 51.737 | 259 | 123 | 2 | 12 | 268 | 4 | 262 | 3.68e-80 | 246 |
MS.gene09240.t1 | MTR_8g080310 | 68.790 | 157 | 49 | 0 | 54 | 210 | 1 | 157 | 1.29e-70 | 215 |
MS.gene09240.t1 | MTR_8g080310 | 66.452 | 155 | 52 | 0 | 102 | 256 | 3 | 157 | 6.20e-66 | 203 |
MS.gene09240.t1 | MTR_8g080310 | 62.585 | 147 | 55 | 0 | 18 | 164 | 11 | 157 | 4.70e-56 | 178 |
MS.gene09240.t1 | MTR_8g080310 | 62.500 | 120 | 45 | 0 | 148 | 267 | 3 | 122 | 1.83e-44 | 148 |
MS.gene09240.t1 | MTR_8g080310 | 44.660 | 103 | 34 | 1 | 16 | 118 | 78 | 157 | 6.75e-18 | 79.3 |
MS.gene09240.t1 | MTR_8g080340 | 69.481 | 154 | 46 | 1 | 131 | 284 | 19 | 171 | 3.76e-68 | 209 |
MS.gene09240.t1 | MTR_8g080340 | 56.970 | 165 | 47 | 2 | 10 | 174 | 13 | 153 | 9.88e-53 | 170 |
MS.gene09240.t1 | MTR_6g043150 | 44.130 | 247 | 138 | 0 | 17 | 263 | 79 | 325 | 8.39e-62 | 198 |
MS.gene09240.t1 | MTR_6g043150 | 38.127 | 299 | 135 | 3 | 9 | 280 | 2 | 277 | 2.66e-57 | 187 |
MS.gene09240.t1 | MTR_6g043150 | 43.575 | 179 | 101 | 0 | 17 | 195 | 148 | 326 | 2.72e-38 | 137 |
MS.gene09240.t1 | MTR_8g088930 | 53.514 | 185 | 86 | 0 | 12 | 196 | 8 | 192 | 2.47e-61 | 206 |
MS.gene09240.t1 | MTR_8g088930 | 42.308 | 182 | 105 | 0 | 61 | 242 | 11 | 192 | 3.83e-39 | 145 |
MS.gene09240.t1 | MTR_8g088930 | 40.252 | 159 | 95 | 0 | 108 | 266 | 12 | 170 | 9.32e-32 | 124 |
MS.gene09240.t1 | MTR_8g088930 | 38.938 | 113 | 69 | 0 | 153 | 265 | 11 | 123 | 1.64e-15 | 77.0 |
MS.gene09240.t1 | MTR_8g088930 | 53.514 | 185 | 86 | 0 | 12 | 196 | 8 | 192 | 2.48e-61 | 206 |
MS.gene09240.t1 | MTR_8g088930 | 42.308 | 182 | 105 | 0 | 61 | 242 | 11 | 192 | 4.08e-39 | 145 |
MS.gene09240.t1 | MTR_8g088930 | 40.252 | 159 | 95 | 0 | 108 | 266 | 12 | 170 | 9.57e-32 | 124 |
MS.gene09240.t1 | MTR_8g088930 | 38.938 | 113 | 69 | 0 | 153 | 265 | 11 | 123 | 1.77e-15 | 76.6 |
MS.gene09240.t1 | MTR_8g088930 | 53.514 | 185 | 86 | 0 | 12 | 196 | 8 | 192 | 5.06e-61 | 206 |
MS.gene09240.t1 | MTR_8g088930 | 42.308 | 182 | 105 | 0 | 61 | 242 | 11 | 192 | 4.97e-39 | 145 |
MS.gene09240.t1 | MTR_8g088930 | 40.252 | 159 | 95 | 0 | 108 | 266 | 12 | 170 | 1.29e-31 | 124 |
MS.gene09240.t1 | MTR_8g088930 | 38.938 | 113 | 69 | 0 | 153 | 265 | 11 | 123 | 2.09e-15 | 76.6 |
MS.gene09240.t1 | MTR_8g088930 | 53.514 | 185 | 86 | 0 | 12 | 196 | 8 | 192 | 5.11e-61 | 206 |
MS.gene09240.t1 | MTR_8g088930 | 42.308 | 182 | 105 | 0 | 61 | 242 | 11 | 192 | 5.00e-39 | 145 |
MS.gene09240.t1 | MTR_8g088930 | 40.252 | 159 | 95 | 0 | 108 | 266 | 12 | 170 | 1.34e-31 | 124 |
MS.gene09240.t1 | MTR_8g088930 | 38.938 | 113 | 69 | 0 | 153 | 265 | 11 | 123 | 2.09e-15 | 76.6 |
MS.gene09240.t1 | MTR_2g078470 | 43.396 | 265 | 150 | 0 | 11 | 275 | 4 | 268 | 1.03e-60 | 197 |
MS.gene09240.t1 | MTR_2g078470 | 39.683 | 252 | 152 | 0 | 17 | 268 | 79 | 330 | 2.56e-60 | 196 |
MS.gene09240.t1 | MTR_2g078470 | 37.611 | 226 | 141 | 0 | 17 | 242 | 148 | 373 | 1.31e-44 | 155 |
MS.gene09240.t1 | MTR_5g010840 | 36.879 | 282 | 147 | 2 | 15 | 273 | 110 | 383 | 1.64e-51 | 174 |
MS.gene09240.t1 | MTR_8g092410 | 38.435 | 294 | 136 | 6 | 1 | 261 | 7 | 288 | 4.08e-50 | 169 |
MS.gene09240.t1 | MTR_8g092410 | 37.387 | 222 | 106 | 6 | 49 | 262 | 140 | 336 | 6.80e-30 | 116 |
MS.gene09240.t1 | MTR_8g092410 | 31.169 | 231 | 106 | 5 | 82 | 266 | 24 | 247 | 5.48e-23 | 97.4 |
MS.gene09240.t1 | MTR_8g080350 | 37.121 | 264 | 93 | 6 | 44 | 241 | 86 | 342 | 6.23e-44 | 154 |
MS.gene09240.t1 | MTR_8g080350 | 42.308 | 156 | 65 | 2 | 136 | 268 | 86 | 239 | 3.06e-33 | 125 |
MS.gene09240.t1 | MTR_8g080350 | 36.239 | 218 | 101 | 3 | 16 | 195 | 125 | 342 | 3.39e-33 | 125 |
MS.gene09240.t1 | MTR_8g080350 | 31.325 | 249 | 107 | 6 | 73 | 259 | 68 | 314 | 2.41e-26 | 107 |
MS.gene09240.t1 | MTR_5g058920 | 43.011 | 186 | 106 | 0 | 6 | 191 | 186 | 371 | 6.15e-41 | 147 |
MS.gene09240.t1 | MTR_5g058920 | 39.560 | 182 | 103 | 1 | 92 | 266 | 173 | 354 | 5.00e-34 | 128 |
MS.gene09240.t1 | MTR_5g058920 | 37.853 | 177 | 110 | 0 | 62 | 238 | 196 | 372 | 1.43e-30 | 119 |
MS.gene09240.t1 | MTR_8g039100 | 38.974 | 195 | 119 | 0 | 13 | 207 | 49 | 243 | 1.22e-38 | 144 |
MS.gene09240.t1 | MTR_8g039100 | 35.426 | 223 | 138 | 3 | 59 | 278 | 51 | 270 | 5.44e-30 | 119 |
MS.gene09240.t1 | MTR_8g039100 | 33.520 | 179 | 113 | 3 | 95 | 268 | 12 | 189 | 7.34e-18 | 84.0 |
MS.gene09240.t1 | MTR_1g062740 | 40.323 | 186 | 111 | 0 | 11 | 196 | 45 | 230 | 4.99e-37 | 139 |
MS.gene09240.t1 | MTR_1g062740 | 38.798 | 183 | 112 | 0 | 60 | 242 | 48 | 230 | 1.01e-29 | 118 |
MS.gene09240.t1 | MTR_1g062740 | 36.250 | 160 | 102 | 0 | 106 | 265 | 48 | 207 | 6.61e-25 | 104 |
MS.gene09240.t1 | MTR_1g062740 | 30.657 | 137 | 95 | 0 | 131 | 267 | 50 | 186 | 3.57e-13 | 70.1 |
MS.gene09240.t1 | MTR_5g459450 | 40.351 | 171 | 102 | 0 | 10 | 180 | 62 | 232 | 8.87e-36 | 136 |
MS.gene09240.t1 | MTR_5g459450 | 35.220 | 159 | 103 | 0 | 109 | 267 | 69 | 227 | 2.84e-25 | 105 |
MS.gene09240.t1 | MTR_5g459450 | 37.681 | 138 | 86 | 0 | 131 | 268 | 68 | 205 | 5.92e-22 | 95.9 |
MS.gene09240.t1 | MTR_5g459450 | 29.439 | 214 | 122 | 3 | 36 | 249 | 48 | 232 | 1.06e-19 | 89.4 |
MS.gene09240.t1 | MTR_1g050740 | 40.217 | 184 | 110 | 0 | 13 | 196 | 57 | 240 | 9.18e-36 | 135 |
MS.gene09240.t1 | MTR_1g050740 | 33.333 | 228 | 145 | 3 | 64 | 284 | 62 | 289 | 7.60e-30 | 119 |
MS.gene09240.t1 | MTR_1g050740 | 36.970 | 165 | 102 | 1 | 101 | 265 | 55 | 217 | 1.96e-26 | 108 |
MS.gene09240.t1 | MTR_1g050740 | 34.975 | 203 | 130 | 1 | 24 | 226 | 47 | 247 | 3.78e-26 | 108 |
MS.gene09240.t1 | MTR_7g451440 | 40.556 | 180 | 107 | 0 | 14 | 193 | 189 | 368 | 1.90e-35 | 132 |
MS.gene09240.t1 | MTR_7g451440 | 39.884 | 173 | 104 | 0 | 41 | 213 | 193 | 365 | 2.64e-32 | 124 |
MS.gene09240.t1 | MTR_7g451440 | 35.294 | 187 | 121 | 0 | 59 | 245 | 188 | 374 | 5.05e-32 | 123 |
MS.gene09240.t1 | MTR_7g451440 | 39.506 | 162 | 98 | 0 | 105 | 266 | 188 | 349 | 9.79e-30 | 117 |
MS.gene09240.t1 | MTR_7g451440 | 36.571 | 175 | 111 | 0 | 87 | 261 | 193 | 367 | 6.43e-28 | 112 |
MS.gene09240.t1 | MTR_3g072650 | 39.037 | 187 | 112 | 1 | 6 | 190 | 172 | 358 | 2.05e-34 | 129 |
MS.gene09240.t1 | MTR_3g072650 | 35.326 | 184 | 119 | 0 | 50 | 233 | 172 | 355 | 6.36e-31 | 119 |
MS.gene09240.t1 | MTR_3g072650 | 37.423 | 163 | 102 | 0 | 103 | 265 | 179 | 341 | 1.84e-29 | 115 |
MS.gene09240.t1 | MTR_3g072650 | 32.353 | 204 | 135 | 1 | 81 | 284 | 180 | 380 | 4.26e-27 | 108 |
MS.gene09240.t1 | MTR_3g072650 | 37.391 | 115 | 72 | 0 | 145 | 259 | 175 | 289 | 4.68e-16 | 77.8 |
MS.gene09240.t1 | MTR_3g072650 | 39.037 | 187 | 112 | 1 | 6 | 190 | 172 | 358 | 3.52e-34 | 129 |
MS.gene09240.t1 | MTR_3g072650 | 35.326 | 184 | 119 | 0 | 50 | 233 | 172 | 355 | 1.71e-30 | 119 |
MS.gene09240.t1 | MTR_3g072650 | 37.423 | 163 | 102 | 0 | 103 | 265 | 179 | 341 | 6.44e-29 | 114 |
MS.gene09240.t1 | MTR_3g072650 | 32.500 | 200 | 132 | 1 | 81 | 280 | 180 | 376 | 2.37e-25 | 104 |
MS.gene09240.t1 | MTR_3g072650 | 37.391 | 115 | 72 | 0 | 145 | 259 | 175 | 289 | 8.45e-16 | 77.4 |
MS.gene09240.t1 | MTR_8g007500 | 39.459 | 185 | 112 | 0 | 9 | 193 | 189 | 373 | 7.10e-34 | 128 |
MS.gene09240.t1 | MTR_8g007500 | 36.957 | 184 | 116 | 0 | 62 | 245 | 196 | 379 | 1.33e-30 | 119 |
MS.gene09240.t1 | MTR_8g007500 | 39.506 | 162 | 98 | 0 | 105 | 266 | 193 | 354 | 2.09e-27 | 110 |
MS.gene09240.t1 | MTR_3g023310 | 48.855 | 131 | 54 | 1 | 122 | 252 | 9 | 126 | 3.12e-33 | 120 |
MS.gene09240.t1 | MTR_3g023310 | 48.062 | 129 | 54 | 1 | 78 | 206 | 11 | 126 | 1.13e-29 | 110 |
MS.gene09240.t1 | MTR_3g023310 | 45.736 | 129 | 57 | 1 | 32 | 160 | 11 | 126 | 3.05e-29 | 109 |
MS.gene09240.t1 | MTR_3g023310 | 50.588 | 85 | 42 | 0 | 30 | 114 | 42 | 126 | 2.45e-20 | 86.3 |
MS.gene09240.t1 | MTR_4g099180 | 39.205 | 176 | 107 | 0 | 38 | 213 | 170 | 345 | 1.94e-32 | 124 |
MS.gene09240.t1 | MTR_4g099180 | 38.889 | 162 | 99 | 0 | 105 | 266 | 168 | 329 | 1.42e-27 | 110 |
MS.gene09240.t1 | MTR_4g099180 | 33.514 | 185 | 123 | 0 | 55 | 239 | 164 | 348 | 2.06e-27 | 110 |
MS.gene09240.t1 | MTR_4g099180 | 35.632 | 174 | 112 | 0 | 86 | 259 | 172 | 345 | 1.19e-25 | 105 |
MS.gene09240.t1 | MTR_3g073100 | 38.286 | 175 | 107 | 1 | 13 | 186 | 53 | 227 | 6.65e-32 | 124 |
MS.gene09240.t1 | MTR_3g073100 | 32.653 | 196 | 129 | 2 | 73 | 267 | 23 | 216 | 6.98e-27 | 110 |
MS.gene09240.t1 | MTR_3g073100 | 33.032 | 221 | 138 | 4 | 36 | 255 | 35 | 246 | 5.48e-26 | 107 |
MS.gene09240.t1 | MTR_3g073100 | 36.471 | 170 | 102 | 2 | 18 | 186 | 82 | 246 | 2.27e-22 | 97.1 |
MS.gene09240.t1 | MTR_3g073100 | 35.971 | 139 | 88 | 1 | 131 | 268 | 56 | 194 | 1.17e-19 | 89.4 |
MS.gene09240.t1 | MTR_7g089950 | 40.113 | 177 | 106 | 0 | 11 | 187 | 65 | 241 | 8.25e-32 | 124 |
MS.gene09240.t1 | MTR_7g089950 | 38.217 | 157 | 97 | 0 | 109 | 265 | 71 | 227 | 2.76e-24 | 102 |
MS.gene09240.t1 | MTR_7g089950 | 35.673 | 171 | 110 | 0 | 63 | 233 | 71 | 241 | 3.90e-23 | 99.4 |
MS.gene09240.t1 | MTR_7g089950 | 33.918 | 171 | 113 | 0 | 86 | 256 | 71 | 241 | 1.34e-21 | 94.7 |
MS.gene09240.t1 | MTR_3g097260 | 40.884 | 181 | 107 | 0 | 7 | 187 | 45 | 225 | 4.40e-31 | 122 |
MS.gene09240.t1 | MTR_3g097260 | 36.723 | 177 | 112 | 0 | 61 | 237 | 53 | 229 | 1.08e-20 | 92.0 |
MS.gene09240.t1 | MTR_3g097260 | 34.503 | 171 | 112 | 0 | 86 | 256 | 55 | 225 | 6.69e-19 | 87.0 |
MS.gene09240.t1 | MTR_3g097260 | 37.107 | 159 | 100 | 0 | 109 | 267 | 55 | 213 | 7.92e-19 | 86.7 |
MS.gene09240.t1 | MTR_3g097260 | 38.406 | 138 | 85 | 0 | 131 | 268 | 54 | 191 | 4.44e-18 | 84.3 |
MS.gene09240.t1 | MTR_3g014650 | 33.824 | 204 | 113 | 2 | 13 | 206 | 85 | 276 | 9.42e-30 | 118 |
MS.gene09240.t1 | MTR_3g014650 | 32.701 | 211 | 129 | 2 | 64 | 274 | 90 | 287 | 2.15e-26 | 108 |
MS.gene09240.t1 | MTR_8g095170 | 36.126 | 191 | 120 | 2 | 3 | 192 | 16 | 205 | 6.21e-29 | 115 |
MS.gene09240.t1 | MTR_8g095170 | 38.365 | 159 | 97 | 1 | 109 | 266 | 30 | 188 | 3.10e-27 | 110 |
MS.gene09240.t1 | MTR_8g095170 | 36.041 | 197 | 120 | 4 | 64 | 255 | 31 | 226 | 4.94e-25 | 104 |
MS.gene09240.t1 | MTR_8g095170 | 36.508 | 189 | 118 | 2 | 5 | 192 | 18 | 205 | 1.23e-28 | 115 |
MS.gene09240.t1 | MTR_8g095170 | 38.365 | 159 | 97 | 1 | 109 | 266 | 30 | 188 | 5.23e-27 | 110 |
MS.gene09240.t1 | MTR_8g095170 | 36.041 | 197 | 120 | 4 | 64 | 255 | 31 | 226 | 7.65e-25 | 104 |
MS.gene09240.t1 | MTR_4g099180 | 37.008 | 127 | 80 | 0 | 38 | 164 | 170 | 296 | 3.22e-18 | 83.2 |
MS.gene09240.t1 | MTR_4g099180 | 41.525 | 118 | 69 | 0 | 14 | 131 | 169 | 286 | 4.41e-18 | 82.8 |
MS.gene09240.t1 | MTR_4g099180 | 33.333 | 156 | 92 | 1 | 128 | 283 | 168 | 311 | 4.47e-17 | 80.1 |
MS.gene09240.t1 | MTR_4g099180 | 38.655 | 119 | 73 | 0 | 105 | 223 | 168 | 286 | 7.59e-17 | 79.3 |
MS.gene09240.t1 | MTR_4g099180 | 33.884 | 121 | 80 | 0 | 55 | 175 | 164 | 284 | 4.32e-13 | 68.6 |
MS.gene09240.t1 | MTR_4g099180 | 36.036 | 111 | 71 | 0 | 86 | 196 | 172 | 282 | 1.09e-12 | 67.4 |
MS.gene09240.t1 | MTR_4g099180 | 41.525 | 118 | 69 | 0 | 14 | 131 | 169 | 286 | 6.96e-18 | 82.4 |
MS.gene09240.t1 | MTR_4g099180 | 39.823 | 113 | 68 | 0 | 38 | 150 | 170 | 282 | 4.61e-17 | 80.1 |
MS.gene09240.t1 | MTR_4g099180 | 38.655 | 119 | 73 | 0 | 105 | 223 | 168 | 286 | 1.34e-16 | 79.0 |
MS.gene09240.t1 | MTR_4g099180 | 41.121 | 107 | 63 | 0 | 128 | 234 | 168 | 274 | 1.55e-16 | 78.6 |
MS.gene09240.t1 | MTR_4g099180 | 34.677 | 124 | 73 | 1 | 141 | 256 | 150 | 273 | 4.86e-15 | 74.3 |
MS.gene09240.t1 | MTR_4g099180 | 33.884 | 121 | 80 | 0 | 55 | 175 | 164 | 284 | 4.79e-13 | 68.6 |
MS.gene09240.t1 | MTR_4g099180 | 36.036 | 111 | 71 | 0 | 86 | 196 | 172 | 282 | 1.69e-12 | 67.0 |
MS.gene09240.t1 | MTR_3g023315 | 55.172 | 58 | 17 | 2 | 1 | 58 | 1 | 49 | 9.30e-12 | 60.5 |
MS.gene09240.t1 | MTR_1g112280 | 37.069 | 116 | 73 | 0 | 75 | 190 | 625 | 740 | 3.37e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09240.t1 | AT1G60890 | 47.644 | 191 | 100 | 0 | 7 | 197 | 1 | 191 | 3.50e-54 | 187 |
MS.gene09240.t1 | AT1G60890 | 41.209 | 182 | 107 | 0 | 62 | 243 | 10 | 191 | 4.83e-40 | 148 |
MS.gene09240.t1 | AT1G60890 | 40.881 | 159 | 94 | 0 | 108 | 266 | 10 | 168 | 3.14e-33 | 129 |
MS.gene09240.t1 | AT1G60890 | 48.168 | 191 | 99 | 0 | 7 | 197 | 13 | 203 | 3.62e-54 | 187 |
MS.gene09240.t1 | AT1G60890 | 41.209 | 182 | 107 | 0 | 62 | 243 | 22 | 203 | 5.89e-40 | 148 |
MS.gene09240.t1 | AT1G60890 | 40.881 | 159 | 94 | 0 | 108 | 266 | 22 | 180 | 3.81e-33 | 128 |
MS.gene09240.t1 | AT1G10900 | 45.946 | 185 | 100 | 0 | 13 | 197 | 7 | 191 | 3.15e-49 | 174 |
MS.gene09240.t1 | AT1G10900 | 38.798 | 183 | 112 | 0 | 61 | 243 | 9 | 191 | 8.44e-37 | 139 |
MS.gene09240.t1 | AT1G10900 | 38.750 | 160 | 98 | 0 | 107 | 266 | 9 | 168 | 8.93e-30 | 119 |
MS.gene09240.t1 | AT1G10900 | 45.946 | 185 | 100 | 0 | 13 | 197 | 7 | 191 | 3.15e-49 | 174 |
MS.gene09240.t1 | AT1G10900 | 38.798 | 183 | 112 | 0 | 61 | 243 | 9 | 191 | 8.44e-37 | 139 |
MS.gene09240.t1 | AT1G10900 | 38.750 | 160 | 98 | 0 | 107 | 266 | 9 | 168 | 8.93e-30 | 119 |
MS.gene09240.t1 | AT1G10900 | 45.946 | 185 | 100 | 0 | 13 | 197 | 7 | 191 | 3.15e-49 | 174 |
MS.gene09240.t1 | AT1G10900 | 38.798 | 183 | 112 | 0 | 61 | 243 | 9 | 191 | 8.44e-37 | 139 |
MS.gene09240.t1 | AT1G10900 | 38.750 | 160 | 98 | 0 | 107 | 266 | 9 | 168 | 8.93e-30 | 119 |
MS.gene09240.t1 | AT1G21980 | 41.714 | 175 | 102 | 0 | 13 | 187 | 72 | 246 | 5.72e-39 | 145 |
MS.gene09240.t1 | AT1G21980 | 36.216 | 185 | 114 | 1 | 53 | 233 | 62 | 246 | 2.76e-30 | 120 |
MS.gene09240.t1 | AT1G21980 | 37.975 | 158 | 98 | 0 | 109 | 266 | 76 | 233 | 2.06e-29 | 117 |
MS.gene09240.t1 | AT3G07960 | 40.000 | 185 | 111 | 0 | 13 | 197 | 23 | 207 | 8.59e-39 | 144 |
MS.gene09240.t1 | AT3G07960 | 40.764 | 157 | 93 | 0 | 109 | 265 | 27 | 183 | 1.02e-31 | 124 |
MS.gene09240.t1 | AT3G07960 | 34.634 | 205 | 121 | 2 | 64 | 262 | 28 | 225 | 1.60e-31 | 123 |
MS.gene09240.t1 | AT3G07960 | 38.938 | 113 | 69 | 0 | 17 | 129 | 96 | 208 | 1.02e-14 | 74.3 |
MS.gene09240.t1 | AT3G07960 | 40.000 | 185 | 111 | 0 | 13 | 197 | 23 | 207 | 1.07e-38 | 143 |
MS.gene09240.t1 | AT3G07960 | 40.764 | 157 | 93 | 0 | 109 | 265 | 27 | 183 | 1.17e-31 | 124 |
MS.gene09240.t1 | AT3G07960 | 34.634 | 205 | 121 | 2 | 64 | 262 | 28 | 225 | 1.85e-31 | 123 |
MS.gene09240.t1 | AT3G07960 | 38.938 | 113 | 69 | 0 | 17 | 129 | 96 | 208 | 1.25e-14 | 74.3 |
MS.gene09240.t1 | AT3G07960 | 40.000 | 185 | 111 | 0 | 13 | 197 | 23 | 207 | 1.07e-38 | 143 |
MS.gene09240.t1 | AT3G07960 | 40.764 | 157 | 93 | 0 | 109 | 265 | 27 | 183 | 1.17e-31 | 124 |
MS.gene09240.t1 | AT3G07960 | 34.634 | 205 | 121 | 2 | 64 | 262 | 28 | 225 | 1.85e-31 | 123 |
MS.gene09240.t1 | AT3G07960 | 38.938 | 113 | 69 | 0 | 17 | 129 | 96 | 208 | 1.25e-14 | 74.3 |
MS.gene09240.t1 | AT3G07960 | 40.000 | 185 | 111 | 0 | 13 | 197 | 23 | 207 | 2.70e-38 | 143 |
MS.gene09240.t1 | AT3G07960 | 40.764 | 157 | 93 | 0 | 109 | 265 | 27 | 183 | 2.26e-31 | 123 |
MS.gene09240.t1 | AT3G07960 | 34.634 | 205 | 121 | 2 | 64 | 262 | 28 | 225 | 3.68e-31 | 122 |
MS.gene09240.t1 | AT3G07960 | 38.938 | 113 | 69 | 0 | 17 | 129 | 96 | 208 | 1.73e-14 | 73.9 |
MS.gene09240.t1 | AT3G09920 | 41.270 | 189 | 111 | 0 | 8 | 196 | 44 | 232 | 3.15e-38 | 143 |
MS.gene09240.t1 | AT3G09920 | 39.891 | 183 | 110 | 0 | 60 | 242 | 50 | 232 | 2.32e-32 | 126 |
MS.gene09240.t1 | AT3G09920 | 39.752 | 161 | 97 | 0 | 106 | 266 | 50 | 210 | 2.15e-26 | 108 |
MS.gene09240.t1 | AT3G09920 | 41.270 | 189 | 111 | 0 | 8 | 196 | 44 | 232 | 3.15e-38 | 143 |
MS.gene09240.t1 | AT3G09920 | 39.891 | 183 | 110 | 0 | 60 | 242 | 50 | 232 | 2.32e-32 | 126 |
MS.gene09240.t1 | AT3G09920 | 39.752 | 161 | 97 | 0 | 106 | 266 | 50 | 210 | 2.15e-26 | 108 |
MS.gene09240.t1 | AT3G09920 | 41.270 | 189 | 111 | 0 | 8 | 196 | 44 | 232 | 3.15e-38 | 143 |
MS.gene09240.t1 | AT3G09920 | 39.891 | 183 | 110 | 0 | 60 | 242 | 50 | 232 | 2.32e-32 | 126 |
MS.gene09240.t1 | AT3G09920 | 39.752 | 161 | 97 | 0 | 106 | 266 | 50 | 210 | 2.15e-26 | 108 |
MS.gene09240.t1 | AT3G09920 | 41.270 | 189 | 111 | 0 | 8 | 196 | 44 | 232 | 3.15e-38 | 143 |
MS.gene09240.t1 | AT3G09920 | 39.891 | 183 | 110 | 0 | 60 | 242 | 50 | 232 | 2.32e-32 | 126 |
MS.gene09240.t1 | AT3G09920 | 39.752 | 161 | 97 | 0 | 106 | 266 | 50 | 210 | 2.15e-26 | 108 |
MS.gene09240.t1 | AT1G21920 | 40.107 | 187 | 110 | 1 | 6 | 190 | 161 | 347 | 1.09e-35 | 131 |
MS.gene09240.t1 | AT1G21920 | 36.413 | 184 | 117 | 0 | 50 | 233 | 161 | 344 | 2.08e-31 | 120 |
MS.gene09240.t1 | AT1G21920 | 38.650 | 163 | 100 | 0 | 103 | 265 | 168 | 330 | 3.18e-28 | 111 |
MS.gene09240.t1 | AT1G21920 | 31.658 | 199 | 136 | 0 | 81 | 279 | 169 | 367 | 4.43e-25 | 103 |
MS.gene09240.t1 | AT3G56960 | 35.961 | 203 | 121 | 1 | 13 | 206 | 68 | 270 | 1.73e-35 | 135 |
MS.gene09240.t1 | AT3G56960 | 35.196 | 179 | 116 | 0 | 64 | 242 | 73 | 251 | 5.83e-29 | 116 |
MS.gene09240.t1 | AT3G56960 | 36.264 | 182 | 105 | 2 | 84 | 265 | 58 | 228 | 2.60e-28 | 114 |
MS.gene09240.t1 | AT3G56960 | 33.514 | 185 | 123 | 0 | 86 | 270 | 72 | 256 | 8.22e-25 | 104 |
MS.gene09240.t1 | AT3G56960 | 35.961 | 203 | 121 | 1 | 13 | 206 | 68 | 270 | 1.73e-35 | 135 |
MS.gene09240.t1 | AT3G56960 | 35.196 | 179 | 116 | 0 | 64 | 242 | 73 | 251 | 5.83e-29 | 116 |
MS.gene09240.t1 | AT3G56960 | 36.264 | 182 | 105 | 2 | 84 | 265 | 58 | 228 | 2.60e-28 | 114 |
MS.gene09240.t1 | AT3G56960 | 33.514 | 185 | 123 | 0 | 86 | 270 | 72 | 256 | 8.22e-25 | 104 |
MS.gene09240.t1 | AT2G41210 | 36.275 | 204 | 121 | 1 | 13 | 207 | 66 | 269 | 2.93e-35 | 134 |
MS.gene09240.t1 | AT2G41210 | 35.754 | 179 | 115 | 0 | 64 | 242 | 71 | 249 | 9.34e-28 | 112 |
MS.gene09240.t1 | AT2G41210 | 36.364 | 165 | 103 | 1 | 101 | 265 | 64 | 226 | 2.88e-26 | 108 |
MS.gene09240.t1 | AT1G21920 | 40.107 | 187 | 110 | 1 | 6 | 190 | 161 | 347 | 3.93e-35 | 131 |
MS.gene09240.t1 | AT1G21920 | 36.413 | 184 | 117 | 0 | 50 | 233 | 161 | 344 | 1.02e-30 | 119 |
MS.gene09240.t1 | AT1G21920 | 38.650 | 163 | 100 | 0 | 103 | 265 | 168 | 330 | 1.52e-27 | 110 |
MS.gene09240.t1 | AT1G21920 | 31.500 | 200 | 137 | 0 | 81 | 280 | 169 | 368 | 2.34e-24 | 101 |
MS.gene09240.t1 | AT1G77740 | 39.429 | 175 | 106 | 0 | 13 | 187 | 73 | 247 | 9.21e-35 | 133 |
MS.gene09240.t1 | AT1G77740 | 37.647 | 170 | 106 | 0 | 64 | 233 | 78 | 247 | 3.09e-28 | 114 |
MS.gene09240.t1 | AT1G77740 | 36.709 | 158 | 100 | 0 | 109 | 266 | 77 | 234 | 1.75e-27 | 112 |
MS.gene09240.t1 | AT1G77740 | 33.333 | 171 | 114 | 0 | 86 | 256 | 77 | 247 | 6.86e-23 | 98.6 |
MS.gene09240.t1 | AT1G77740 | 36.496 | 137 | 87 | 0 | 131 | 267 | 76 | 212 | 9.46e-22 | 95.5 |
MS.gene09240.t1 | AT1G77740 | 39.429 | 175 | 106 | 0 | 13 | 187 | 73 | 247 | 9.21e-35 | 133 |
MS.gene09240.t1 | AT1G77740 | 37.647 | 170 | 106 | 0 | 64 | 233 | 78 | 247 | 3.09e-28 | 114 |
MS.gene09240.t1 | AT1G77740 | 36.709 | 158 | 100 | 0 | 109 | 266 | 77 | 234 | 1.75e-27 | 112 |
MS.gene09240.t1 | AT1G77740 | 33.333 | 171 | 114 | 0 | 86 | 256 | 77 | 247 | 6.86e-23 | 98.6 |
MS.gene09240.t1 | AT1G77740 | 36.496 | 137 | 87 | 0 | 131 | 267 | 76 | 212 | 9.46e-22 | 95.5 |
MS.gene09240.t1 | AT1G77660 | 40.314 | 191 | 112 | 1 | 2 | 190 | 161 | 351 | 2.42e-34 | 129 |
MS.gene09240.t1 | AT1G77660 | 36.813 | 182 | 115 | 0 | 54 | 235 | 169 | 350 | 2.94e-29 | 115 |
MS.gene09240.t1 | AT1G77660 | 38.650 | 163 | 100 | 0 | 103 | 265 | 172 | 334 | 8.53e-26 | 105 |
MS.gene09240.t1 | AT2G26420 | 39.884 | 173 | 104 | 0 | 2 | 174 | 38 | 210 | 9.19e-33 | 127 |
MS.gene09240.t1 | AT2G26420 | 37.975 | 158 | 98 | 0 | 110 | 267 | 54 | 211 | 2.22e-26 | 108 |
MS.gene09240.t1 | AT2G26420 | 36.875 | 160 | 101 | 0 | 87 | 246 | 54 | 213 | 1.48e-22 | 97.8 |
MS.gene09240.t1 | AT2G26420 | 39.884 | 173 | 104 | 0 | 2 | 174 | 38 | 210 | 1.12e-32 | 127 |
MS.gene09240.t1 | AT2G26420 | 37.975 | 158 | 98 | 0 | 110 | 267 | 54 | 211 | 2.51e-26 | 108 |
MS.gene09240.t1 | AT2G26420 | 36.875 | 160 | 101 | 0 | 87 | 246 | 54 | 213 | 1.68e-22 | 97.4 |
MS.gene09240.t1 | AT2G26420 | 39.884 | 173 | 104 | 0 | 2 | 174 | 38 | 210 | 1.12e-32 | 127 |
MS.gene09240.t1 | AT2G26420 | 37.975 | 158 | 98 | 0 | 110 | 267 | 54 | 211 | 2.51e-26 | 108 |
MS.gene09240.t1 | AT2G26420 | 36.875 | 160 | 101 | 0 | 87 | 246 | 54 | 213 | 1.68e-22 | 97.4 |
MS.gene09240.t1 | AT4G17080 | 40.000 | 175 | 105 | 0 | 16 | 190 | 256 | 430 | 3.24e-32 | 124 |
MS.gene09240.t1 | AT4G17080 | 37.714 | 175 | 109 | 0 | 39 | 213 | 256 | 430 | 1.54e-29 | 117 |
MS.gene09240.t1 | AT4G17080 | 32.487 | 197 | 127 | 1 | 59 | 255 | 253 | 443 | 1.14e-28 | 114 |
MS.gene09240.t1 | AT4G17080 | 38.012 | 171 | 106 | 0 | 96 | 266 | 244 | 414 | 1.65e-28 | 114 |
MS.gene09240.t1 | AT2G35170 | 39.181 | 171 | 104 | 0 | 20 | 190 | 229 | 399 | 9.25e-30 | 117 |
MS.gene09240.t1 | AT2G35170 | 35.028 | 177 | 115 | 0 | 59 | 235 | 222 | 398 | 7.47e-28 | 112 |
MS.gene09240.t1 | AT2G35170 | 38.824 | 170 | 104 | 0 | 44 | 213 | 230 | 399 | 1.84e-27 | 111 |
MS.gene09240.t1 | AT1G75010 | 34.646 | 127 | 83 | 0 | 64 | 190 | 603 | 729 | 1.97e-11 | 64.7 |
Find 83 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAACGTCTACACTGGAAAT+TGG | 0.199973 | 4.1:+14829294 | MS.gene09240:CDS |
GAAACGTCTACACTGGAAAT+TGG | 0.199973 | 4.1:+14829570 | MS.gene09240:CDS |
TACACTGGAAATTGGGAAAA+AGG | 0.217123 | 4.1:+14829578 | MS.gene09240:CDS |
GGGATGTCTACGCTGGAAAT+TGG | 0.240613 | 4.1:+14829432 | MS.gene09240:CDS |
TACACTGGAAATTGGGAAAA+AGG | 0.296129 | 4.1:+14829302 | MS.gene09240:CDS |
GAGATGTCTACACTGGAAAT+TGG | 0.297839 | 4.1:+14829708 | MS.gene09240:CDS |
TGACCAACAACCATCGAAAA+TGG | 0.303459 | 4.1:-14829228 | None:intergenic |
TACGCTGGAAATTGGGAAAA+AGG | 0.309774 | 4.1:+14829440 | MS.gene09240:CDS |
AATTAAGCTTCAGATGATAA+TGG | 0.335808 | 4.1:-14829873 | None:intergenic |
ATGGAAAAGGGATTATGAAT+TGG | 0.347632 | 4.1:+14829471 | MS.gene09240:CDS |
AATGGACTTTCGCATGGATA+TGG | 0.353378 | 4.1:+14829527 | MS.gene09240:CDS |
TACGAGGGCGATTGGGTTGA+TGG | 0.368273 | 4.1:+14829785 | MS.gene09240:CDS |
AATGGACATAAACATGGATA+TGG | 0.369212 | 4.1:+14829389 | MS.gene09240:CDS |
TTCAATGGTTATTGGTCAAA+TGG | 0.370575 | 4.1:+14829371 | MS.gene09240:CDS |
AGGGAAAGGGATTATGAATT+GGG | 0.375715 | 4.1:+14829196 | MS.gene09240:CDS |
GAGTTTATAGATTTGCAAAT+GGG | 0.384860 | 4.1:+14829411 | MS.gene09240:CDS |
CAGGGAAAGGGATTATGAAT+TGG | 0.387625 | 4.1:+14829195 | MS.gene09240:CDS |
TTCAAGGGTGAACTTCTTCA+TGG | 0.393069 | 4.1:+14829107 | MS.gene09240:CDS |
TTCGATGGTTGTTGGTCAAA+TGG | 0.393393 | 4.1:+14829233 | MS.gene09240:CDS |
AATGGACTTTCACATGGATA+TGG | 0.393948 | 4.1:+14829251 | MS.gene09240:CDS |
TGGAAAAGGGATTATGAATT+GGG | 0.398832 | 4.1:+14829472 | MS.gene09240:CDS |
ATTAAGCTTCAGATGATAAT+GGG | 0.406796 | 4.1:-14829872 | None:intergenic |
TTCGATGGTTATTGGTCAAA+TGG | 0.407614 | 4.1:+14829647 | MS.gene09240:CDS |
TACGAGGGTGACTGGGTTGA+TGG | 0.408545 | 4.1:+14829164 | MS.gene09240:CDS |
AATAATAAAATGGATGGAAG+AGG | 0.408648 | 4.1:+14829734 | MS.gene09240:CDS |
GAACAATATACGAGGGTGAC+TGG | 0.412789 | 4.1:+14829156 | MS.gene09240:CDS |
ATGGAAAAGGGATTATGAAA+TGG | 0.419433 | 4.1:+14829333 | MS.gene09240:CDS |
TTCGATGGTTGCTGGTCAAA+TGG | 0.420223 | 4.1:+14829509 | MS.gene09240:CDS |
GGGATTATGAATTGGGCTAA+TGG | 0.426829 | 4.1:+14829479 | MS.gene09240:CDS |
AAGGGGAAAGGGATGGAAAA+GGG | 0.430911 | 4.1:+14829597 | MS.gene09240:CDS |
TGGGTTGATGGACAAATGAT+AGG | 0.434531 | 4.1:+14829797 | MS.gene09240:CDS |
GGAGTTTATAGATTTGCAAA+TGG | 0.437498 | 4.1:+14829410 | MS.gene09240:CDS |
AAAGGGGAAAGGGATGGAAA+AGG | 0.442937 | 4.1:+14829596 | MS.gene09240:CDS |
ATGGAAAAGGGATTATGAAA+TGG | 0.443399 | 4.1:+14829609 | MS.gene09240:CDS |
AAAGGAGAAAAGGATGGAAA+AGG | 0.446263 | 4.1:+14829458 | MS.gene09240:CDS |
AAACGTCTACACTGGAAATT+GGG | 0.451480 | 4.1:+14829295 | MS.gene09240:CDS |
AAACGTCTACACTGGAAATT+GGG | 0.451480 | 4.1:+14829571 | MS.gene09240:CDS |
AAGGAGAAAAGGATGGAAAA+GGG | 0.451607 | 4.1:+14829459 | MS.gene09240:CDS |
GGGATTATGAATTGGTCAAA+TGG | 0.455729 | 4.1:+14829755 | MS.gene09240:CDS |
GAACAATGTACGAGGGCGAT+TGG | 0.457462 | 4.1:+14829777 | MS.gene09240:CDS |
AAGGTGAAAGGCATGGAAAA+GGG | 0.462403 | 4.1:+14829321 | MS.gene09240:CDS |
GGATGTCTACGCTGGAAATT+GGG | 0.465315 | 4.1:+14829433 | MS.gene09240:CDS |
ATGGAAGAGGGATTATGAAT+TGG | 0.469752 | 4.1:+14829747 | MS.gene09240:CDS |
GGGATTATGAATTGGGGTAA+TGG | 0.470324 | 4.1:+14829203 | MS.gene09240:CDS |
AACAATGTACGAGGGCGATT+GGG | 0.470740 | 4.1:+14829778 | MS.gene09240:CDS |
TGTCTACATTGGTAAATTCA+AGG | 0.474127 | 4.1:+14829091 | MS.gene09240:CDS |
AAAGGTGAAAGGCATGGAAA+AGG | 0.474168 | 4.1:+14829320 | MS.gene09240:CDS |
GGAGTTTATAGATTTGCAAA+TGG | 0.480472 | 4.1:+14829686 | MS.gene09240:CDS |
TGGAAAAGGGATTATGAAAT+GGG | 0.487859 | 4.1:+14829610 | MS.gene09240:CDS |
TGGAAAAGGGATTATGAAAT+GGG | 0.493424 | 4.1:+14829334 | MS.gene09240:CDS |
GGAAAGTACACATGGACAAA+TGG | 0.494048 | 4.1:+14829134 | MS.gene09240:CDS |
GATGGAAAAGTGACAGGGAA+AGG | 0.496612 | 4.1:+14829182 | MS.gene09240:CDS |
GGAGTTTATAGATCTGCAAA+TGG | 0.513797 | 4.1:+14829272 | MS.gene09240:CDS |
GGAGTTTATAGATCTGCAAA+TGG | 0.513797 | 4.1:+14829548 | MS.gene09240:CDS |
TCAAATGGGGATGTCTACAT+TGG | 0.518877 | 4.1:+14829080 | MS.gene09240:CDS |
ATGGAAAAGTGACAGGGAAA+GGG | 0.534561 | 4.1:+14829183 | MS.gene09240:CDS |
TGGGTTGATGGAAAAGTGAC+AGG | 0.540161 | 4.1:+14829176 | MS.gene09240:CDS |
ATAATAAAATGGATGGAAGA+GGG | 0.546218 | 4.1:+14829735 | MS.gene09240:CDS |
GATGGACAAATGATAGGGAA+TGG | 0.550634 | 4.1:+14829803 | MS.gene09240:CDS |
AACAATATACGAGGGTGACT+GGG | 0.562591 | 4.1:+14829157 | MS.gene09240:CDS |
GGGTTGATGGACAAATGATA+GGG | 0.565463 | 4.1:+14829798 | MS.gene09240:CDS |
AGTTTATAGATTTGCAAATG+GGG | 0.568661 | 4.1:+14829412 | MS.gene09240:CDS |
GTCTACATTGGTAAATTCAA+GGG | 0.570653 | 4.1:+14829092 | MS.gene09240:CDS |
AATGGACAGAAACATGGCTA+TGG | 0.574469 | 4.1:+14829665 | MS.gene09240:CDS |
GGTGAACTTCTTCATGGCAT+CGG | 0.576407 | 4.1:+14829113 | MS.gene09240:CDS |
TGGTCAAATGGACTTTCACA+TGG | 0.576790 | 4.1:+14829245 | MS.gene09240:CDS |
GGGAATGGATTGATGATACC+AGG | 0.577591 | 4.1:+14829818 | MS.gene09240:CDS |
GCAAATGGAAACGTCTACAC+TGG | 0.588126 | 4.1:+14829287 | MS.gene09240:CDS |
GCAAATGGAAACGTCTACAC+TGG | 0.588126 | 4.1:+14829563 | MS.gene09240:CDS |
GCAAATGGGGATGTCTACGC+TGG | 0.596613 | 4.1:+14829425 | MS.gene09240:CDS |
TGGTCAAATGGACAGAAACA+TGG | 0.596729 | 4.1:+14829659 | MS.gene09240:CDS |
TGGTCAAATGGACTTTCGCA+TGG | 0.604154 | 4.1:+14829521 | MS.gene09240:CDS |
TGGTCAAATGGACATAAACA+TGG | 0.607218 | 4.1:+14829383 | MS.gene09240:CDS |
GCAAATGGAGATGTCTACAC+TGG | 0.608648 | 4.1:+14829701 | MS.gene09240:CDS |
GGGATTATGAAATGGGCTAA+CGG | 0.622522 | 4.1:+14829341 | MS.gene09240:CDS |
GGGATTATGAAATGGGCTAA+CGG | 0.622522 | 4.1:+14829617 | MS.gene09240:CDS |
GGGAAAGGGATTATGAATTG+GGG | 0.649116 | 4.1:+14829197 | MS.gene09240:CDS |
GTCAAATGGAACAATGTACG+AGG | 0.679412 | 4.1:+14829769 | MS.gene09240:CDS |
ATGGCATCGGAAAGTACACA+TGG | 0.681327 | 4.1:+14829126 | MS.gene09240:CDS |
GACAAATGGAACAATATACG+AGG | 0.707016 | 4.1:+14829148 | MS.gene09240:CDS |
TCAAATGGAACAATGTACGA+GGG | 0.718322 | 4.1:+14829770 | MS.gene09240:CDS |
ACAAATGGAACAATATACGA+GGG | 0.718645 | 4.1:+14829149 | MS.gene09240:CDS |
GGGTTGATGGAAAAGTGACA+GGG | 0.720292 | 4.1:+14829177 | MS.gene09240:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTGGAAAAATAATAAAA+TGG | + | chr4.1:14829724-14829743 | MS.gene09240:CDS | 10.0% |
!! | TGGAAAAATAATAAAATGGA+TGG | + | chr4.1:14829728-14829747 | MS.gene09240:CDS | 20.0% |
! | AATAATAAAATGGATGGAAG+AGG | + | chr4.1:14829734-14829753 | MS.gene09240:CDS | 25.0% |
! | AGTTTATAGATTTGCAAATG+GGG | + | chr4.1:14829412-14829431 | MS.gene09240:CDS | 25.0% |
! | ATAATAAAATGGATGGAAGA+GGG | + | chr4.1:14829735-14829754 | MS.gene09240:CDS | 25.0% |
! | GAGTTTATAGATTTGCAAAT+GGG | + | chr4.1:14829411-14829430 | MS.gene09240:CDS | 25.0% |
!! | AAAGAGAAGTTCTTTTCAAA+TGG | + | chr4.1:14829065-14829084 | MS.gene09240:CDS | 25.0% |
!! | AAGAGAAGTTCTTTTCAAAT+GGG | + | chr4.1:14829066-14829085 | MS.gene09240:CDS | 25.0% |
AAAAATGTACATAGAAAGCC+TGG | - | chr4.1:14829839-14829858 | None:intergenic | 30.0% | |
AAATTGGGAAAAAGGAGAAA+AGG | + | chr4.1:14829448-14829467 | MS.gene09240:CDS | 30.0% | |
AATGGACATAAACATGGATA+TGG | + | chr4.1:14829389-14829408 | MS.gene09240:CDS | 30.0% | |
ACAAATGGAACAATATACGA+GGG | + | chr4.1:14829149-14829168 | MS.gene09240:CDS | 30.0% | |
ATGGAAAAGGGATTATGAAA+TGG | + | chr4.1:14829333-14829352 | MS.gene09240:CDS | 30.0% | |
ATGGAAAAGGGATTATGAAT+TGG | + | chr4.1:14829471-14829490 | MS.gene09240:CDS | 30.0% | |
GGAGTTTATAGATTTGCAAA+TGG | + | chr4.1:14829410-14829429 | MS.gene09240:CDS | 30.0% | |
GTCTACATTGGTAAATTCAA+GGG | + | chr4.1:14829092-14829111 | MS.gene09240:CDS | 30.0% | |
TGGAAAAGGGATTATGAAAT+GGG | + | chr4.1:14829334-14829353 | MS.gene09240:CDS | 30.0% | |
TGGAAAAGGGATTATGAATT+GGG | + | chr4.1:14829472-14829491 | MS.gene09240:CDS | 30.0% | |
TGTCTACATTGGTAAATTCA+AGG | + | chr4.1:14829091-14829110 | MS.gene09240:CDS | 30.0% | |
TTCAATGGTTATTGGTCAAA+TGG | + | chr4.1:14829371-14829390 | MS.gene09240:CDS | 30.0% | |
! | AGAGAAGTTCTTTTCAAATG+GGG | + | chr4.1:14829067-14829086 | MS.gene09240:CDS | 30.0% |
! | GTGATGTTTTCAATGGTTAT+TGG | + | chr4.1:14829363-14829382 | MS.gene09240:CDS | 30.0% |
AAACGTCTACACTGGAAATT+GGG | + | chr4.1:14829295-14829314 | MS.gene09240:CDS | 35.0% | |
AAAGGAGAAAAGGATGGAAA+AGG | + | chr4.1:14829458-14829477 | MS.gene09240:CDS | 35.0% | |
AAATTGGGAAAAAGGGGAAA+GGG | + | chr4.1:14829586-14829605 | MS.gene09240:CDS | 35.0% | |
AAGGAGAAAAGGATGGAAAA+GGG | + | chr4.1:14829459-14829478 | MS.gene09240:CDS | 35.0% | |
ACACTGGAAATTGGGAAAAA+GGG | + | chr4.1:14829303-14829322 | MS.gene09240:CDS | 35.0% | |
AGGGAAAGGGATTATGAATT+GGG | + | chr4.1:14829196-14829215 | MS.gene09240:CDS | 35.0% | |
ATGGAAGAGGGATTATGAAT+TGG | + | chr4.1:14829747-14829766 | MS.gene09240:CDS | 35.0% | |
GAAATTGGGAAAAAGGTGAA+AGG | + | chr4.1:14829309-14829328 | MS.gene09240:CDS | 35.0% | |
GACAAATGGAACAATATACG+AGG | + | chr4.1:14829148-14829167 | MS.gene09240:CDS | 35.0% | |
GGAGTTTATAGATCTGCAAA+TGG | + | chr4.1:14829272-14829291 | MS.gene09240:CDS | 35.0% | |
GGGATTATGAATTGGTCAAA+TGG | + | chr4.1:14829755-14829774 | MS.gene09240:CDS | 35.0% | |
TACACTGGAAATTGGGAAAA+AGG | + | chr4.1:14829302-14829321 | MS.gene09240:CDS | 35.0% | |
TCAAATGGAACAATGTACGA+GGG | + | chr4.1:14829770-14829789 | MS.gene09240:CDS | 35.0% | |
TGGTCAAATGGACATAAACA+TGG | + | chr4.1:14829383-14829402 | MS.gene09240:CDS | 35.0% | |
TTCGATGGTTATTGGTCAAA+TGG | + | chr4.1:14829647-14829666 | MS.gene09240:CDS | 35.0% | |
! | AATGGACTTTCACATGGATA+TGG | + | chr4.1:14829251-14829270 | MS.gene09240:CDS | 35.0% |
! | GTGATGTTTTCGATGGTTAT+TGG | + | chr4.1:14829639-14829658 | MS.gene09240:CDS | 35.0% |
AACAATATACGAGGGTGACT+GGG | + | chr4.1:14829157-14829176 | MS.gene09240:CDS | 40.0% | |
AATGGACAGAAACATGGCTA+TGG | + | chr4.1:14829665-14829684 | MS.gene09240:CDS | 40.0% | |
ATGGAAAAGTGACAGGGAAA+GGG | + | chr4.1:14829183-14829202 | MS.gene09240:CDS | 40.0% | |
CACTGGAAATTGGGAAAAAG+GGG | + | chr4.1:14829304-14829323 | MS.gene09240:CDS | 40.0% | |
CAGGGAAAGGGATTATGAAT+TGG | + | chr4.1:14829195-14829214 | MS.gene09240:CDS | 40.0% | |
GAAACGTCTACACTGGAAAT+TGG | + | chr4.1:14829294-14829313 | MS.gene09240:CDS | 40.0% | |
GAAATTGGGAAAAAGGGGAA+AGG | + | chr4.1:14829585-14829604 | MS.gene09240:CDS | 40.0% | |
GAGATGTCTACACTGGAAAT+TGG | + | chr4.1:14829708-14829727 | MS.gene09240:CDS | 40.0% | |
GATGGACAAATGATAGGGAA+TGG | + | chr4.1:14829803-14829822 | MS.gene09240:CDS | 40.0% | |
GGGAAAGGGATTATGAATTG+GGG | + | chr4.1:14829197-14829216 | MS.gene09240:CDS | 40.0% | |
GGGATTATGAATTGGGCTAA+TGG | + | chr4.1:14829479-14829498 | MS.gene09240:CDS | 40.0% | |
GGGATTATGAATTGGGGTAA+TGG | + | chr4.1:14829203-14829222 | MS.gene09240:CDS | 40.0% | |
GTCAAATGGAACAATGTACG+AGG | + | chr4.1:14829769-14829788 | MS.gene09240:CDS | 40.0% | |
TACGCTGGAAATTGGGAAAA+AGG | + | chr4.1:14829440-14829459 | MS.gene09240:CDS | 40.0% | |
TCAAATGGGGATGTCTACAT+TGG | + | chr4.1:14829080-14829099 | MS.gene09240:CDS | 40.0% | |
TGACCAACAACCATCGAAAA+TGG | - | chr4.1:14829231-14829250 | None:intergenic | 40.0% | |
TGGGAAAAAGGAGAAAAGGA+TGG | + | chr4.1:14829452-14829471 | MS.gene09240:CDS | 40.0% | |
TGGTCAAATGGACAGAAACA+TGG | + | chr4.1:14829659-14829678 | MS.gene09240:CDS | 40.0% | |
TTCAAGGGTGAACTTCTTCA+TGG | + | chr4.1:14829107-14829126 | MS.gene09240:CDS | 40.0% | |
TTCGATGGTTGTTGGTCAAA+TGG | + | chr4.1:14829233-14829252 | MS.gene09240:CDS | 40.0% | |
! | AAAGGTGAAAGGCATGGAAA+AGG | + | chr4.1:14829320-14829339 | MS.gene09240:CDS | 40.0% |
! | AAGGTGAAAGGCATGGAAAA+GGG | + | chr4.1:14829321-14829340 | MS.gene09240:CDS | 40.0% |
! | AATGGACTTTCGCATGGATA+TGG | + | chr4.1:14829527-14829546 | MS.gene09240:CDS | 40.0% |
! | GCTAACGGTGATGTTTTCAA+TGG | + | chr4.1:14829356-14829375 | MS.gene09240:CDS | 40.0% |
! | GGAAAGTACACATGGACAAA+TGG | + | chr4.1:14829134-14829153 | MS.gene09240:CDS | 40.0% |
! | TGGTCAAATGGACTTTCACA+TGG | + | chr4.1:14829245-14829264 | MS.gene09240:CDS | 40.0% |
!! | GGGATTATGAAATGGGCTAA+CGG | + | chr4.1:14829341-14829360 | MS.gene09240:CDS | 40.0% |
!! | GGGTTGATGGACAAATGATA+GGG | + | chr4.1:14829798-14829817 | MS.gene09240:CDS | 40.0% |
!! | TGGGTTGATGGACAAATGAT+AGG | + | chr4.1:14829797-14829816 | MS.gene09240:CDS | 40.0% |
!!! | GCTAATGGTGCTATTTTCGA+TGG | + | chr4.1:14829494-14829513 | MS.gene09240:CDS | 40.0% |
AAAGGGGAAAGGGATGGAAA+AGG | + | chr4.1:14829596-14829615 | MS.gene09240:CDS | 45.0% | |
AACAATGTACGAGGGCGATT+GGG | + | chr4.1:14829778-14829797 | MS.gene09240:CDS | 45.0% | |
AAGGGGAAAGGGATGGAAAA+GGG | + | chr4.1:14829597-14829616 | MS.gene09240:CDS | 45.0% | |
GAACAATATACGAGGGTGAC+TGG | + | chr4.1:14829156-14829175 | MS.gene09240:CDS | 45.0% | |
GATGGAAAAGTGACAGGGAA+AGG | + | chr4.1:14829182-14829201 | MS.gene09240:CDS | 45.0% | |
GCAAATGGAAACGTCTACAC+TGG | + | chr4.1:14829287-14829306 | MS.gene09240:CDS | 45.0% | |
GCAAATGGAGATGTCTACAC+TGG | + | chr4.1:14829701-14829720 | MS.gene09240:CDS | 45.0% | |
GGATGTCTACGCTGGAAATT+GGG | + | chr4.1:14829433-14829452 | MS.gene09240:CDS | 45.0% | |
GGTGAACTTCTTCATGGCAT+CGG | + | chr4.1:14829113-14829132 | MS.gene09240:CDS | 45.0% | |
TGGGAAAAAGGTGAAAGGCA+TGG | + | chr4.1:14829314-14829333 | MS.gene09240:CDS | 45.0% | |
TTCGATGGTTGCTGGTCAAA+TGG | + | chr4.1:14829509-14829528 | MS.gene09240:CDS | 45.0% | |
! | ATGGCATCGGAAAGTACACA+TGG | + | chr4.1:14829126-14829145 | MS.gene09240:CDS | 45.0% |
! | GCTAACGGTGATGTTTTCGA+TGG | + | chr4.1:14829632-14829651 | MS.gene09240:CDS | 45.0% |
! | TGGTCAAATGGACTTTCGCA+TGG | + | chr4.1:14829521-14829540 | MS.gene09240:CDS | 45.0% |
!! | GGGAATGGATTGATGATACC+AGG | + | chr4.1:14829818-14829837 | MS.gene09240:CDS | 45.0% |
!! | GGGTTGATGGAAAAGTGACA+GGG | + | chr4.1:14829177-14829196 | MS.gene09240:CDS | 45.0% |
!! | TGGGTTGATGGAAAAGTGAC+AGG | + | chr4.1:14829176-14829195 | MS.gene09240:CDS | 45.0% |
!!! | GGTAATGGTGCCATTTTCGA+TGG | + | chr4.1:14829218-14829237 | MS.gene09240:CDS | 45.0% |
!!! | GTGCCATTTTCGATGGTTGT+TGG | + | chr4.1:14829225-14829244 | MS.gene09240:CDS | 45.0% |
!!! | GTGCTATTTTCGATGGTTGC+TGG | + | chr4.1:14829501-14829520 | MS.gene09240:CDS | 45.0% |
GAACAATGTACGAGGGCGAT+TGG | + | chr4.1:14829777-14829796 | MS.gene09240:CDS | 50.0% | |
GGGATGTCTACGCTGGAAAT+TGG | + | chr4.1:14829432-14829451 | MS.gene09240:CDS | 50.0% | |
TGGGAAAAAGGGGAAAGGGA+TGG | + | chr4.1:14829590-14829609 | MS.gene09240:CDS | 50.0% | |
GCAAATGGGGATGTCTACGC+TGG | + | chr4.1:14829425-14829444 | MS.gene09240:CDS | 55.0% | |
! | TACGAGGGTGACTGGGTTGA+TGG | + | chr4.1:14829164-14829183 | MS.gene09240:CDS | 55.0% |
!! | TACGAGGGCGATTGGGTTGA+TGG | + | chr4.1:14829785-14829804 | MS.gene09240:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 14829032 | 14829886 | 14829032 | ID=MS.gene09240 |
chr4.1 | mRNA | 14829032 | 14829886 | 14829032 | ID=MS.gene09240.t1;Parent=MS.gene09240 |
chr4.1 | exon | 14829032 | 14829886 | 14829032 | ID=MS.gene09240.t1.exon1;Parent=MS.gene09240.t1 |
chr4.1 | CDS | 14829032 | 14829886 | 14829032 | ID=cds.MS.gene09240.t1;Parent=MS.gene09240.t1 |
Gene Sequence |
Protein sequence |