Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22896.t1 | XP_013450562.1 | 91.1 | 538 | 41 | 2 | 1 | 538 | 1 | 531 | 2.20E-292 | 1014.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22896.t1 | A0A072UFM7 | 91.1 | 538 | 41 | 2 | 1 | 538 | 1 | 531 | 1.6e-292 | 1014.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049633 | MS.gene22896 | 0.840943 | 6.41E-58 | -1.69E-46 |
| MS.gene049757 | MS.gene22896 | 0.803748 | 3.01E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene22896 | 0.800176 | 1.63E-48 | -1.69E-46 |
| MS.gene050553 | MS.gene22896 | 0.972522 | 6.64E-135 | -1.69E-46 |
| MS.gene050747 | MS.gene22896 | 0.803294 | 3.73E-49 | -1.69E-46 |
| MS.gene050809 | MS.gene22896 | -0.828318 | 9.61E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene22896 | 0.839515 | 1.51E-57 | -1.69E-46 |
| MS.gene05081 | MS.gene22896 | 0.824818 | 6.57E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene22896 | 0.84163 | 4.23E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene22896 | 0.839082 | 1.96E-57 | -1.69E-46 |
| MS.gene051521 | MS.gene22896 | 0.809052 | 2.29E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene22896 | 0.85428 | 1.37E-61 | -1.69E-46 |
| MS.gene051874 | MS.gene22896 | 0.818665 | 1.74E-52 | -1.69E-46 |
| MS.gene052136 | MS.gene22896 | 0.806159 | 9.42E-50 | -1.69E-46 |
| MS.gene052346 | MS.gene22896 | 0.804654 | 1.95E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene22896 | 0.823845 | 1.11E-53 | -1.69E-46 |
| MS.gene052469 | MS.gene22896 | 0.830724 | 2.50E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene22896 | 0.842777 | 2.10E-58 | -1.69E-46 |
| MS.gene053449 | MS.gene22896 | 0.805279 | 1.44E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene22896 | 0.832267 | 1.04E-55 | -1.69E-46 |
| MS.gene053912 | MS.gene22896 | 0.848242 | 6.94E-60 | -1.69E-46 |
| MS.gene05494 | MS.gene22896 | 0.860105 | 2.60E-63 | -1.69E-46 |
| MS.gene055159 | MS.gene22896 | -0.810242 | 1.27E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene22896 | 0.81859 | 1.81E-52 | -1.69E-46 |
| MS.gene055577 | MS.gene22896 | 0.802756 | 4.82E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene22896 | 0.824384 | 8.31E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene22896 | 0.821041 | 4.98E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene22896 | 0.823632 | 1.25E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene22896 | 0.825787 | 3.87E-54 | -1.69E-46 |
| MS.gene056283 | MS.gene22896 | 0.801235 | 9.91E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene22896 | 0.81456 | 1.45E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene22896 | 0.808011 | 3.82E-50 | -1.69E-46 |
| MS.gene057086 | MS.gene22896 | 0.807569 | 4.74E-50 | -1.69E-46 |
| MS.gene057289 | MS.gene22896 | 0.812861 | 3.43E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene22896 | 0.836586 | 8.58E-57 | -1.69E-46 |
| MS.gene058120 | MS.gene22896 | 0.863753 | 1.99E-64 | -1.69E-46 |
| MS.gene05837 | MS.gene22896 | 0.819352 | 1.22E-52 | -1.69E-46 |
| MS.gene058448 | MS.gene22896 | 0.845307 | 4.41E-59 | -1.69E-46 |
| MS.gene058700 | MS.gene22896 | 0.803066 | 4.16E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene22896 | 0.808624 | 2.83E-50 | -1.69E-46 |
| MS.gene05960 | MS.gene22896 | -0.81759 | 3.05E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene22896 | 0.812632 | 3.85E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene22896 | 0.804801 | 1.81E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene22896 | 0.802363 | 5.81E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22896.t1 | MTR_7g115570 | 95.167 | 538 | 19 | 2 | 1 | 538 | 1 | 531 | 0.0 | 1062 |
| MS.gene22896.t1 | MTR_7g115570 | 94.568 | 405 | 15 | 2 | 1 | 405 | 1 | 398 | 0.0 | 791 |
| MS.gene22896.t1 | MTR_1g080320 | 69.659 | 557 | 143 | 7 | 1 | 538 | 1 | 550 | 0.0 | 790 |
| MS.gene22896.t1 | MTR_7g115570 | 97.521 | 363 | 9 | 0 | 176 | 538 | 1 | 363 | 0.0 | 751 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22896.t1 | AT5G28910 | 57.895 | 532 | 191 | 8 | 8 | 538 | 2 | 501 | 0.0 | 617 |
| MS.gene22896.t1 | AT5G28960 | 54.887 | 532 | 208 | 7 | 8 | 538 | 2 | 502 | 0.0 | 580 |
| MS.gene22896.t1 | AT5G28910 | 67.049 | 349 | 109 | 4 | 190 | 538 | 32 | 374 | 1.28e-177 | 507 |
Find 115 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTATTGTTTCTTTGATTT+TGG | 0.061596 | 7.3:+1960337 | MS.gene22896:CDS |
| TTCTATTTCTTTAGGTTTAA+AGG | 0.141301 | 7.3:-1961574 | None:intergenic |
| GTAGTAGACCTTTGATTTAA+TGG | 0.224978 | 7.3:-1960224 | None:intergenic |
| GTTAATCTTTCTATTTCTTT+AGG | 0.231940 | 7.3:-1961582 | None:intergenic |
| ATTATACGTCGAAGCATATA+TGG | 0.264313 | 7.3:+1962790 | MS.gene22896:CDS |
| ACCAAATGTTATTGAGGTTT+GGG | 0.282915 | 7.3:-1964192 | None:intergenic |
| AACCAAATGTTATTGAGGTT+TGG | 0.296113 | 7.3:-1964193 | None:intergenic |
| CTGAGAGAAGTAAGTGCTTA+TGG | 0.301437 | 7.3:+1961694 | MS.gene22896:CDS |
| ATCTCTCCCAGTCAGCTAAA+AGG | 0.322499 | 7.3:-1962423 | None:intergenic |
| TGGGACCCAGGGCTTGTGAT+TGG | 0.323573 | 7.3:-1964062 | None:intergenic |
| TTGTCACTAACTTCTACAAT+AGG | 0.327883 | 7.3:+1962524 | MS.gene22896:CDS |
| TATTTCTCATTCCATCTATA+AGG | 0.328056 | 7.3:-1964525 | None:intergenic |
| CTTGCCTAATGCTCCACATT+TGG | 0.333008 | 7.3:+1961740 | MS.gene22896:CDS |
| GGCATTGGAGCTCAAATTGC+TGG | 0.341476 | 7.3:+1962457 | MS.gene22896:CDS |
| AAACCAAAGAGTATTCTTCT+AGG | 0.346609 | 7.3:+1964333 | MS.gene22896:CDS |
| CACAAGACTTCCGTTTATAT+CGG | 0.347880 | 7.3:-1962985 | None:intergenic |
| TGGGAGAGATTACCTGGATT+TGG | 0.353736 | 7.3:+1962436 | MS.gene22896:CDS |
| CCACCTAGAAGAATACTCTT+TGG | 0.354022 | 7.3:-1964336 | None:intergenic |
| TGCAGCTTGCTGATAGAATT+AGG | 0.358510 | 7.3:+1964161 | MS.gene22896:CDS |
| CAAAGGTAAGAAGGCAAGAT+AGG | 0.362541 | 7.3:+1964372 | MS.gene22896:CDS |
| TCCCAAACCTCAATAACATT+TGG | 0.374339 | 7.3:+1964191 | MS.gene22896:CDS |
| TTCGGGTCGCTACAGTTTGA+TGG | 0.388599 | 7.3:-1962391 | None:intergenic |
| CTCTTCTAAGCATGCATGTA+AGG | 0.389151 | 7.3:+1964089 | MS.gene22896:CDS |
| GAGGAGCGCCATGCTGCCTT+TGG | 0.390042 | 7.3:+1963300 | MS.gene22896:CDS |
| TTGGCTATTCTTGGTAACTT+TGG | 0.403485 | 7.3:+1960356 | MS.gene22896:CDS |
| GGCTGAGTATGAAGCTAGCC+TGG | 0.415295 | 7.3:+1964409 | MS.gene22896:CDS |
| TATCTTTGCTTTACTCAGCT+TGG | 0.415647 | 7.3:+1961646 | MS.gene22896:CDS |
| GAAAAGTTCAACGCGACATA+TGG | 0.418048 | 7.3:+1962356 | MS.gene22896:CDS |
| CTTCCGTTTATATCGGTTGT+TGG | 0.424746 | 7.3:-1962978 | None:intergenic |
| CTTGCTATTGCAATCAATGA+AGG | 0.433637 | 7.3:+1962493 | MS.gene22896:CDS |
| AATTTATCAATATCAGACTT+TGG | 0.436340 | 7.3:-1964031 | None:intergenic |
| TGCATGCTTAGAAGAGGTCT+TGG | 0.446515 | 7.3:-1964082 | None:intergenic |
| TGAGAGAGTGGTTTCTCAAA+GGG | 0.446705 | 7.3:+1960253 | MS.gene22896:CDS |
| TTCATTATACAAAGGTAAGA+AGG | 0.458461 | 7.3:+1964363 | MS.gene22896:CDS |
| GCTAAAAGGAACTTGACATT+CGG | 0.460601 | 7.3:-1962409 | None:intergenic |
| CTGATATTGATAAATTTGTA+TGG | 0.463456 | 7.3:+1964038 | MS.gene22896:CDS |
| TAGTGCTTCTCTCCCTTCCC+AGG | 0.463552 | 7.3:-1964427 | None:intergenic |
| AAGAGATTAATCAAGATGAA+AGG | 0.465185 | 7.3:+1961622 | MS.gene22896:CDS |
| TATGGTCCAATCACAAGCCC+TGG | 0.466147 | 7.3:+1964056 | MS.gene22896:CDS |
| AACCGTCTCGACACACGTAT+AGG | 0.466328 | 7.3:+1961792 | MS.gene22896:CDS |
| TAGACAACCAAATGTTATTG+AGG | 0.467328 | 7.3:-1964198 | None:intergenic |
| AGTAGCAATTCCAGCTAGAT+CGG | 0.470188 | 7.3:-1962671 | None:intergenic |
| GCTGACTGGGAGAGATTACC+TGG | 0.471329 | 7.3:+1962430 | MS.gene22896:CDS |
| CTAAAAGGAACTTGACATTC+GGG | 0.474877 | 7.3:-1962408 | None:intergenic |
| AGATTACCTGGATTTGGCAT+TGG | 0.484786 | 7.3:+1962442 | MS.gene22896:CDS |
| AGGCTGTACGTTACTTAATG+AGG | 0.485431 | 7.3:+1963244 | MS.gene22896:intron |
| TCTAAGCATGCATGTAAGGA+TGG | 0.488615 | 7.3:+1964093 | MS.gene22896:CDS |
| CAACCAACAACCGATATAAA+CGG | 0.491670 | 7.3:+1962975 | MS.gene22896:CDS |
| TGTCACTAACTTCTACAATA+GGG | 0.493395 | 7.3:+1962525 | MS.gene22896:CDS |
| CAGGGCTGTCCCGATCTAGC+TGG | 0.497278 | 7.3:+1962661 | MS.gene22896:intron |
| AGAGATTAATCAAGATGAAA+GGG | 0.498406 | 7.3:+1961623 | MS.gene22896:CDS |
| GTGAAAGCTTGCCTAGGAGT+TGG | 0.499983 | 7.3:-1962819 | None:intergenic |
| TCGACGGTGGTGGCGAGCAC+AGG | 0.504855 | 7.3:+1963028 | MS.gene22896:CDS |
| AGTAAGTGCTTATGGAAACT+TGG | 0.512305 | 7.3:+1961702 | MS.gene22896:CDS |
| CAATGTATGATGCAGGATAT+GGG | 0.512609 | 7.3:+1962932 | MS.gene22896:intron |
| TACTACTCCTCTTGAGAGAG+TGG | 0.522344 | 7.3:+1960241 | MS.gene22896:CDS |
| CCTTTCCACCATGGACAAGT+AGG | 0.522455 | 7.3:+1961823 | MS.gene22896:CDS |
| ATTGAGGATGCATTGAGTAA+AGG | 0.523240 | 7.3:+1962747 | MS.gene22896:CDS |
| TAGAAGAGGTCTTGGGACCC+AGG | 0.525104 | 7.3:-1964074 | None:intergenic |
| TTGGAGCTTTGGGTTCAACT+TGG | 0.526444 | 7.3:+1964497 | MS.gene22896:CDS |
| AGATAGGAGTAATGTTTCAA+TGG | 0.527576 | 7.3:+1964388 | MS.gene22896:CDS |
| TTCCTATACGTGTGTCGAGA+CGG | 0.527916 | 7.3:-1961794 | None:intergenic |
| TTGAGAGAGTGGTTTCTCAA+AGG | 0.528985 | 7.3:+1960252 | MS.gene22896:CDS |
| AAGTTGCATGTGTATTCAGT+CGG | 0.532185 | 7.3:-1963270 | None:intergenic |
| TTATACGTCGAAGCATATAT+GGG | 0.535262 | 7.3:+1962791 | MS.gene22896:CDS |
| CCTACTTGTCCATGGTGGAA+AGG | 0.537449 | 7.3:-1961823 | None:intergenic |
| GGAAAATAACTTACTGATGG+TGG | 0.537841 | 7.3:-1960438 | None:intergenic |
| GGCTGATCATGATGGCTGCA+AGG | 0.539239 | 7.3:+1962546 | MS.gene22896:CDS |
| TTGGTTGTCTACAGAGATGC+AGG | 0.539391 | 7.3:+1964210 | MS.gene22896:CDS |
| GTAGCAATTCCAGCTAGATC+GGG | 0.539518 | 7.3:-1962670 | None:intergenic |
| TATGGGCAGGACCAACTCCT+AGG | 0.541882 | 7.3:+1962808 | MS.gene22896:CDS |
| AGTTGCATGTGTATTCAGTC+GGG | 0.544098 | 7.3:-1963269 | None:intergenic |
| AGAATGTCGCCAACGTGCGT+TGG | 0.549164 | 7.3:+1962713 | MS.gene22896:CDS |
| GCTGATCATGATGGCTGCAA+GGG | 0.549566 | 7.3:+1962547 | MS.gene22896:CDS |
| TACAATAGGGCTGATCATGA+TGG | 0.551411 | 7.3:+1962538 | MS.gene22896:CDS |
| GCATGCTTAGAAGAGGTCTT+GGG | 0.551947 | 7.3:-1964081 | None:intergenic |
| CACATGCAACTTATTGAATG+AGG | 0.554044 | 7.3:+1963281 | MS.gene22896:CDS |
| GCCATAAGAAAATTAACAAG+TGG | 0.555432 | 7.3:-1964455 | None:intergenic |
| ACGTCGAAGCATATATGGGC+AGG | 0.555903 | 7.3:+1962795 | MS.gene22896:CDS |
| AAATGGAGCCATTAAATCAA+AGG | 0.561729 | 7.3:+1960216 | None:intergenic |
| TGAGCTCCAATGCCAAATCC+AGG | 0.562206 | 7.3:-1962448 | None:intergenic |
| ATGTGGAGCATTAGGCAAGT+TGG | 0.563992 | 7.3:-1961736 | None:intergenic |
| AATCCTTTCCTACTTGTCCA+TGG | 0.564954 | 7.3:-1961831 | None:intergenic |
| AGTATGAAGCTAGCCTGGGA+AGG | 0.565186 | 7.3:+1964414 | MS.gene22896:CDS |
| CGATATAAACGGAAGTCTTG+TGG | 0.565369 | 7.3:+1962986 | MS.gene22896:CDS |
| GCAGGATATGGGGCGATCCG+TGG | 0.570632 | 7.3:+1962943 | MS.gene22896:intron |
| GTTGGTTGCAAATAATTCCA+CGG | 0.574159 | 7.3:-1962960 | None:intergenic |
| GCTCAAATTGCTGGAATGTG+TGG | 0.578209 | 7.3:+1962466 | MS.gene22896:CDS |
| CTAAGCATGCATGTAAGGAT+GGG | 0.579310 | 7.3:+1964094 | MS.gene22896:CDS |
| CTGAGGGTAATCATCCACCC+TGG | 0.583025 | 7.3:+1961880 | MS.gene22896:CDS |
| AGAAGAGGTCTTGGGACCCA+GGG | 0.585539 | 7.3:-1964073 | None:intergenic |
| GAGATGCCTCAGGAGGAGAA+TGG | 0.586610 | 7.3:+1964001 | MS.gene22896:intron |
| TGAGAAACCACTCTCTCAAG+AGG | 0.586656 | 7.3:-1960248 | None:intergenic |
| GTATGAAGCTAGCCTGGGAA+GGG | 0.593330 | 7.3:+1964415 | MS.gene22896:CDS |
| CTTACATGCATGCTTAGAAG+AGG | 0.593796 | 7.3:-1964088 | None:intergenic |
| GCTGAGTATGAAGCTAGCCT+GGG | 0.604368 | 7.3:+1964410 | MS.gene22896:CDS |
| CCACCATGGACAAGTAGGAA+AGG | 0.607649 | 7.3:+1961828 | MS.gene22896:CDS |
| TACCCTCAGATACAGCAAGA+GGG | 0.609496 | 7.3:-1961866 | None:intergenic |
| TGAGGGTAATCATCCACCCT+GGG | 0.609901 | 7.3:+1961881 | MS.gene22896:CDS |
| ATGGTCCAATCACAAGCCCT+GGG | 0.610228 | 7.3:+1964057 | MS.gene22896:CDS |
| GTGGAACTTTCATTATACAA+AGG | 0.616580 | 7.3:+1964355 | MS.gene22896:CDS |
| GAAATGATTCCTTTCCACCA+TGG | 0.616729 | 7.3:+1961814 | MS.gene22896:CDS |
| CCTTTCCTACTTGTCCATGG+TGG | 0.617827 | 7.3:-1961828 | None:intergenic |
| CCAAAGAGTATTCTTCTAGG+TGG | 0.628449 | 7.3:+1964336 | MS.gene22896:CDS |
| ACCCTCAGATACAGCAAGAG+GGG | 0.639224 | 7.3:-1961865 | None:intergenic |
| GTTGGAACTCGTGAAAATTG+AGG | 0.646555 | 7.3:+1962731 | MS.gene22896:CDS |
| TAAAGCATGTGAAATGAGAG+TGG | 0.647417 | 7.3:+1964120 | MS.gene22896:CDS |
| GCAACAGCACATATCTGACA+TGG | 0.647774 | 7.3:-1960299 | None:intergenic |
| CCCTCAGATACAGCAAGAGG+GGG | 0.652389 | 7.3:-1961864 | None:intergenic |
| TCTTATTGGAGAATGGCCAA+AGG | 0.652636 | 7.3:+1963353 | MS.gene22896:CDS |
| ATTAAGAAACATACCCAGGG+TGG | 0.662468 | 7.3:-1961894 | None:intergenic |
| TTACCCTCAGATACAGCAAG+AGG | 0.671672 | 7.3:-1961867 | None:intergenic |
| AATGTATGATGCAGGATATG+GGG | 0.675541 | 7.3:+1962933 | MS.gene22896:intron |
| TATTGTAGAAGTTAGTGACA+AGG | 0.707557 | 7.3:-1962522 | None:intergenic |
| TCACGAGTTCCAACGCACGT+TGG | 0.722369 | 7.3:-1962722 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATTTTAAAAAAACAGT+AGG | - | chr7.3:1961150-1961169 | None:intergenic | 10.0% |
| !!! | AATTTGTTATTTAGTAATTT+TGG | + | chr7.3:1962014-1962033 | MS.gene22896:intron | 10.0% |
| !!! | GTACAATAATTTTTTTTTTT+AGG | + | chr7.3:1960851-1960870 | MS.gene22896:intron | 10.0% |
| !! | AAAACAAGAAAATCATAAAT+GGG | - | chr7.3:1960597-1960616 | None:intergenic | 15.0% |
| !! | AAAAGAAGAAAATAATAAAG+GGG | - | chr7.3:1961108-1961127 | None:intergenic | 15.0% |
| !! | ACAAAAGAAGAAAATAATAA+AGG | - | chr7.3:1961110-1961129 | None:intergenic | 15.0% |
| !! | CAAAAGAAGAAAATAATAAA+GGG | - | chr7.3:1961109-1961128 | None:intergenic | 15.0% |
| !!! | ACTATCAATAAGTAATTTTT+TGG | - | chr7.3:1960769-1960788 | None:intergenic | 15.0% |
| !!! | AGCATACTATAATTAATTTT+TGG | + | chr7.3:1961296-1961315 | MS.gene22896:intron | 15.0% |
| !!! | ATTAATTTTAGAAAAACAGT+AGG | - | chr7.3:1960746-1960765 | None:intergenic | 15.0% |
| !!! | GATTCATTTTTTTTTTTTGA+GGG | - | chr7.3:1960687-1960706 | None:intergenic | 15.0% |
| !!! | TCATTTTCTATAATCTAATA+AGG | - | chr7.3:1962278-1962297 | None:intergenic | 15.0% |
| !!! | TTTGGATTTTGTATTTAATA+AGG | + | chr7.3:1962117-1962136 | MS.gene22896:intron | 15.0% |
| !! | AATATCAAAGCATGTAAAAA+TGG | - | chr7.3:1963961-1963980 | None:intergenic | 20.0% |
| !! | AATTTATCAATATCAGACTT+TGG | - | chr7.3:1964034-1964053 | None:intergenic | 20.0% |
| !! | ATATATATGTGTATTGGATA+CGG | + | chr7.3:1963696-1963715 | MS.gene22896:intron | 20.0% |
| !! | CAAAACAAGAAAATCATAAA+TGG | - | chr7.3:1960598-1960617 | None:intergenic | 20.0% |
| !! | CATATTATTGGATTAATGTT+AGG | - | chr7.3:1960646-1960665 | None:intergenic | 20.0% |
| !! | CTAGTTATTAAGAGAAAATT+GGG | + | chr7.3:1960513-1960532 | MS.gene22896:intron | 20.0% |
| !! | CTGATATTGATAAATTTGTA+TGG | + | chr7.3:1964038-1964057 | MS.gene22896:CDS | 20.0% |
| !! | TACAAGATAACATTACATTA+GGG | + | chr7.3:1961344-1961363 | MS.gene22896:intron | 20.0% |
| !! | TGGATTAATAAACAGAAATA+AGG | - | chr7.3:1963058-1963077 | None:intergenic | 20.0% |
| !!! | GGATTCATTTTTTTTTTTTG+AGG | - | chr7.3:1960688-1960707 | None:intergenic | 20.0% |
| !!! | GTTAATCTTTCTATTTCTTT+AGG | - | chr7.3:1961585-1961604 | None:intergenic | 20.0% |
| !!! | TTCTATTTCTTTAGGTTTAA+AGG | - | chr7.3:1961577-1961596 | None:intergenic | 20.0% |
| ! | AAAACATTGGTAGAATATGA+TGG | - | chr7.3:1963127-1963146 | None:intergenic | 25.0% |
| ! | AACAGTAGGATTCATATTAT+TGG | - | chr7.3:1960658-1960677 | None:intergenic | 25.0% |
| ! | AAGAGATTAATCAAGATGAA+AGG | + | chr7.3:1961622-1961641 | MS.gene22896:CDS | 25.0% |
| ! | AGAGATTAATCAAGATGAAA+GGG | + | chr7.3:1961623-1961642 | MS.gene22896:CDS | 25.0% |
| ! | ATACCAAATAGGAAAATTAG+TGG | - | chr7.3:1963387-1963406 | None:intergenic | 25.0% |
| ! | CATCATTAAATCACTATTCA+TGG | - | chr7.3:1963204-1963223 | None:intergenic | 25.0% |
| ! | CATTACATAATAATGCACTT+AGG | - | chr7.3:1962154-1962173 | None:intergenic | 25.0% |
| ! | CCTAGTTATTAAGAGAAAAT+TGG | + | chr7.3:1960512-1960531 | MS.gene22896:intron | 25.0% |
| ! | CTACAAGATAACATTACATT+AGG | + | chr7.3:1961343-1961362 | MS.gene22896:intron | 25.0% |
| ! | GAAATACAGTTGAAACTTTA+GGG | + | chr7.3:1961182-1961201 | MS.gene22896:intron | 25.0% |
| ! | GACATAAGAATAAGAAGAAT+AGG | - | chr7.3:1962913-1962932 | None:intergenic | 25.0% |
| ! | GATATTTAATATGAGACACA+TGG | + | chr7.3:1960961-1960980 | MS.gene22896:intron | 25.0% |
| ! | GTAGTAAATGAAAGTGATTA+AGG | - | chr7.3:1960462-1960481 | None:intergenic | 25.0% |
| ! | TAACACAAAGAAGAATAAGA+AGG | - | chr7.3:1964274-1964293 | None:intergenic | 25.0% |
| ! | TAAGGAAAATAACTTACTGA+TGG | - | chr7.3:1960444-1960463 | None:intergenic | 25.0% |
| ! | TACTATAAAAAGTTGGAAAG+TGG | - | chr7.3:1961455-1961474 | None:intergenic | 25.0% |
| ! | TAGGAAACTACTATCATATT+TGG | + | chr7.3:1962099-1962118 | MS.gene22896:intron | 25.0% |
| ! | TGAAATACAGTTGAAACTTT+AGG | + | chr7.3:1961181-1961200 | MS.gene22896:intron | 25.0% |
| ! | TTAATCCATGATATCATTGA+TGG | + | chr7.3:1963070-1963089 | MS.gene22896:intron | 25.0% |
| ! | TTCATTATACAAAGGTAAGA+AGG | + | chr7.3:1964363-1964382 | MS.gene22896:CDS | 25.0% |
| ! | TTCTTCATATAGCAGTTAAA+AGG | - | chr7.3:1961042-1961061 | None:intergenic | 25.0% |
| ! | TTGTGCTTTACATCTATAAA+TGG | + | chr7.3:1963437-1963456 | MS.gene22896:intron | 25.0% |
| !! | CCAATTTTCTCTTAATAACT+AGG | - | chr7.3:1960515-1960534 | None:intergenic | 25.0% |
| !! | CTTGATGAGTATGAAATTTT+AGG | + | chr7.3:1961225-1961244 | MS.gene22896:intron | 25.0% |
| !! | TGTTAATTTTCTTATGGCTA+CGG | + | chr7.3:1964460-1964479 | MS.gene22896:CDS | 25.0% |
| !! | TTGCCATAATTATCATTTTC+AGG | + | chr7.3:1963224-1963243 | MS.gene22896:intron | 25.0% |
| !!! | ACTGTGAAGTTTTGTTAAAA+TGG | - | chr7.3:1962609-1962628 | None:intergenic | 25.0% |
| !!! | ATGGTTCTAAAAAGTCTTAT+TGG | + | chr7.3:1963339-1963358 | MS.gene22896:CDS | 25.0% |
| !!! | CTGTATTGTTTCTTTGATTT+TGG | + | chr7.3:1960337-1960356 | MS.gene22896:CDS | 25.0% |
| !!! | TAAAAAGTCTTATTGGAGAA+TGG | + | chr7.3:1963346-1963365 | MS.gene22896:CDS | 25.0% |
| !!! | TCCACTTGTTAATTTTCTTA+TGG | + | chr7.3:1964454-1964473 | MS.gene22896:CDS | 25.0% |
| !!! | TCTAATGTCTTGTTTGTTTT+AGG | + | chr7.3:1962080-1962099 | MS.gene22896:intron | 25.0% |
| AACCAAATGTTATTGAGGTT+TGG | - | chr7.3:1964196-1964215 | None:intergenic | 30.0% | |
| AATGATTAAGAAACATACCC+AGG | - | chr7.3:1961901-1961920 | None:intergenic | 30.0% | |
| ACACGTGTACTATAAAAAGT+TGG | - | chr7.3:1961462-1961481 | None:intergenic | 30.0% | |
| ACCAAATGTTATTGAGGTTT+GGG | - | chr7.3:1964195-1964214 | None:intergenic | 30.0% | |
| ACCAGCATATATATGTGTAT+TGG | + | chr7.3:1963690-1963709 | MS.gene22896:intron | 30.0% | |
| AGAAGAATAGGTTTATGTTC+AGG | - | chr7.3:1962901-1962920 | None:intergenic | 30.0% | |
| AGATAGGAGTAATGTTTCAA+TGG | + | chr7.3:1964388-1964407 | MS.gene22896:CDS | 30.0% | |
| ATGATTAAGAAACATACCCA+GGG | - | chr7.3:1961900-1961919 | None:intergenic | 30.0% | |
| ATTAATGTTAGGAAGACAGT+AGG | - | chr7.3:1960635-1960654 | None:intergenic | 30.0% | |
| ATTATACGTCGAAGCATATA+TGG | + | chr7.3:1962790-1962809 | MS.gene22896:CDS | 30.0% | |
| ATTGTGTCAAAAATGCACTT+AGG | - | chr7.3:1962201-1962220 | None:intergenic | 30.0% | |
| ATTTGGTATAGAAGACTAAG+TGG | + | chr7.3:1963398-1963417 | MS.gene22896:intron | 30.0% | |
| CACATTCTGACTTTATACTT+TGG | - | chr7.3:1963850-1963869 | None:intergenic | 30.0% | |
| CAGCCTGAAAATGATAATTA+TGG | - | chr7.3:1963230-1963249 | None:intergenic | 30.0% | |
| CTTAATAACTAGGCTAGAAA+CGG | - | chr7.3:1960505-1960524 | None:intergenic | 30.0% | |
| GCATTCTAACTTGGTATATT+GGG | + | chr7.3:1963823-1963842 | MS.gene22896:intron | 30.0% | |
| GCCATAAGAAAATTAACAAG+TGG | - | chr7.3:1964458-1964477 | None:intergenic | 30.0% | |
| GTGGAACTTTCATTATACAA+AGG | + | chr7.3:1964355-1964374 | MS.gene22896:CDS | 30.0% | |
| TAAAAATGGACCATAGGATT+TGG | - | chr7.3:1963947-1963966 | None:intergenic | 30.0% | |
| TATTGTAGAAGTTAGTGACA+AGG | - | chr7.3:1962525-1962544 | None:intergenic | 30.0% | |
| TCAAGTGCACAAACATAAAT+AGG | - | chr7.3:1963642-1963661 | None:intergenic | 30.0% | |
| TCATTGAGTTCATTTGATTC+AGG | + | chr7.3:1964298-1964317 | MS.gene22896:intron | 30.0% | |
| TCCAATACACATATATATGC+TGG | - | chr7.3:1963694-1963713 | None:intergenic | 30.0% | |
| TCTACTACATTATAGAGTCT+TGG | + | chr7.3:1961958-1961977 | MS.gene22896:intron | 30.0% | |
| TCTCTCATGAAACAAAACAT+TGG | - | chr7.3:1963140-1963159 | None:intergenic | 30.0% | |
| TGGGTATGTTTCTTAATCAT+TGG | + | chr7.3:1961900-1961919 | MS.gene22896:intron | 30.0% | |
| TGTCACTAACTTCTACAATA+GGG | + | chr7.3:1962525-1962544 | MS.gene22896:CDS | 30.0% | |
| TTATACGTCGAAGCATATAT+GGG | + | chr7.3:1962791-1962810 | MS.gene22896:CDS | 30.0% | |
| TTGTCACTAACTTCTACAAT+AGG | + | chr7.3:1962524-1962543 | MS.gene22896:CDS | 30.0% | |
| ! | CTTAGTCTTCTATACCAAAT+AGG | - | chr7.3:1963398-1963417 | None:intergenic | 30.0% |
| ! | CTTTTCCATCAATGATATCA+TGG | - | chr7.3:1963078-1963097 | None:intergenic | 30.0% |
| ! | GTAGTAGACCTTTGATTTAA+TGG | - | chr7.3:1960227-1960246 | None:intergenic | 30.0% |
| ! | TCTCCACTAATTTTCCTATT+TGG | + | chr7.3:1963381-1963400 | MS.gene22896:intron | 30.0% |
| ! | TTACTTATGTTTTGTGAGCT+TGG | + | chr7.3:1963488-1963507 | MS.gene22896:intron | 30.0% |
| !! | AAACCAAAGAGTATTCTTCT+AGG | + | chr7.3:1964333-1964352 | MS.gene22896:CDS | 30.0% |
| !! | ATCATCTGGTCTTAATATGA+TGG | - | chr7.3:1963802-1963821 | None:intergenic | 30.0% |
| !! | TAGAATCCAAGTTCACTTTT+TGG | + | chr7.3:1963616-1963635 | MS.gene22896:intron | 30.0% |
| !!! | TCTTTGATTTTGGCTATTCT+TGG | + | chr7.3:1960347-1960366 | MS.gene22896:CDS | 30.0% |
| !!! | TGATTTTTTGTTGGAGCTTT+GGG | + | chr7.3:1964487-1964506 | MS.gene22896:CDS | 30.0% |
| AAGCAATTACGCATTTGACA+CGG | + | chr7.3:1963762-1963781 | MS.gene22896:intron | 35.0% | |
| AAGTTGCATGTGTATTCAGT+CGG | - | chr7.3:1963273-1963292 | None:intergenic | 35.0% | |
| AATAGGCCAAAAAGTGAACT+TGG | - | chr7.3:1963625-1963644 | None:intergenic | 35.0% | |
| AATGTATGATGCAGGATATG+GGG | + | chr7.3:1962933-1962952 | MS.gene22896:intron | 35.0% | |
| AGCATGTAAAAATGGACCAT+AGG | - | chr7.3:1963953-1963972 | None:intergenic | 35.0% | |
| AGTAAGTGCTTATGGAAACT+TGG | + | chr7.3:1961702-1961721 | MS.gene22896:CDS | 35.0% | |
| ATGTTATCTTGTAGCAAGTG+CGG | - | chr7.3:1961337-1961356 | None:intergenic | 35.0% | |
| ATTAGTGGAGAGTTAACCTT+TGG | - | chr7.3:1963372-1963391 | None:intergenic | 35.0% | |
| ATTGAGGATGCATTGAGTAA+AGG | + | chr7.3:1962747-1962766 | MS.gene22896:CDS | 35.0% | |
| CAACCAACAACCGATATAAA+CGG | + | chr7.3:1962975-1962994 | MS.gene22896:CDS | 35.0% | |
| CAATGTATGATGCAGGATAT+GGG | + | chr7.3:1962932-1962951 | MS.gene22896:intron | 35.0% | |
| CACAAGACTTCCGTTTATAT+CGG | - | chr7.3:1962988-1963007 | None:intergenic | 35.0% | |
| CACATGCAACTTATTGAATG+AGG | + | chr7.3:1963281-1963300 | MS.gene22896:CDS | 35.0% | |
| CGCATTCTAACTTGGTATAT+TGG | + | chr7.3:1963822-1963841 | MS.gene22896:intron | 35.0% | |
| CTAAAAGGAACTTGACATTC+GGG | - | chr7.3:1962411-1962430 | None:intergenic | 35.0% | |
| CTTATGTCAATGTATGATGC+AGG | + | chr7.3:1962925-1962944 | MS.gene22896:intron | 35.0% | |
| GCATAGAAAAATGAGCAAAC+TGG | - | chr7.3:1960388-1960407 | None:intergenic | 35.0% | |
| GCTAAAAGGAACTTGACATT+CGG | - | chr7.3:1962412-1962431 | None:intergenic | 35.0% | |
| GGAAAATAACTTACTGATGG+TGG | - | chr7.3:1960441-1960460 | None:intergenic | 35.0% | |
| GGATATGCAGATTCATAGAA+TGG | - | chr7.3:1962588-1962607 | None:intergenic | 35.0% | |
| GTTGGTTGCAAATAATTCCA+CGG | - | chr7.3:1962963-1962982 | None:intergenic | 35.0% | |
| TAAAGCATGTGAAATGAGAG+TGG | + | chr7.3:1964120-1964139 | MS.gene22896:CDS | 35.0% | |
| TATCTTTGCTTTACTCAGCT+TGG | + | chr7.3:1961646-1961665 | MS.gene22896:CDS | 35.0% | |
| TCAATGTATGATGCAGGATA+TGG | + | chr7.3:1962931-1962950 | MS.gene22896:intron | 35.0% | |
| TCCCAAACCTCAATAACATT+TGG | + | chr7.3:1964191-1964210 | MS.gene22896:CDS | 35.0% | |
| TTATGTTCAGGACCTTGTTA+CGG | - | chr7.3:1962889-1962908 | None:intergenic | 35.0% | |
| TTTGAGGGAAGAAAAACAGT+AGG | - | chr7.3:1960672-1960691 | None:intergenic | 35.0% | |
| ! | ATACAGTTGAAACTTTAGGG+AGG | + | chr7.3:1961185-1961204 | MS.gene22896:intron | 35.0% |
| ! | CACTTACTTCTCTCAGTTTT+AGG | - | chr7.3:1961690-1961709 | None:intergenic | 35.0% |
| ! | GATTGATTGATTCCGTAACA+AGG | + | chr7.3:1962874-1962893 | MS.gene22896:intron | 35.0% |
| ! | TTGGCTATTCTTGGTAACTT+TGG | + | chr7.3:1960356-1960375 | MS.gene22896:CDS | 35.0% |
| !! | CTTGCTATTGCAATCAATGA+AGG | + | chr7.3:1962493-1962512 | MS.gene22896:CDS | 35.0% |
| !! | TTTTCCAAATGTGGAGCATT+AGG | - | chr7.3:1961747-1961766 | None:intergenic | 35.0% |
| !!! | CTGATTTTTTGTTGGAGCTT+TGG | + | chr7.3:1964486-1964505 | MS.gene22896:CDS | 35.0% |
| !!! | TACGGACTCTGATTTTTTGT+TGG | + | chr7.3:1964478-1964497 | MS.gene22896:CDS | 35.0% |
| !!! | TTGTCATGTATTTTGACCTC+TGG | + | chr7.3:1963979-1963998 | MS.gene22896:intron | 35.0% |
| AATCCTTTCCTACTTGTCCA+TGG | - | chr7.3:1961834-1961853 | None:intergenic | 40.0% | |
| ACCAAGGAATCCAAATCCTA+TGG | + | chr7.3:1963934-1963953 | MS.gene22896:intron | 40.0% | |
| ACCATAGGATTTGGATTCCT+TGG | - | chr7.3:1963938-1963957 | None:intergenic | 40.0% | |
| AGATTACCTGGATTTGGCAT+TGG | + | chr7.3:1962442-1962461 | MS.gene22896:CDS | 40.0% | |
| AGGCTGTACGTTACTTAATG+AGG | + | chr7.3:1963244-1963263 | MS.gene22896:intron | 40.0% | |
| AGTAGCAATTCCAGCTAGAT+CGG | - | chr7.3:1962674-1962693 | None:intergenic | 40.0% | |
| AGTTGCATGTGTATTCAGTC+GGG | - | chr7.3:1963272-1963291 | None:intergenic | 40.0% | |
| ATTAAGAAACATACCCAGGG+TGG | - | chr7.3:1961897-1961916 | None:intergenic | 40.0% | |
| ATTTAGCTGGAGAAGCTAGA+CGG | + | chr7.3:1963588-1963607 | MS.gene22896:intron | 40.0% | |
| CAAAGGTAAGAAGGCAAGAT+AGG | + | chr7.3:1964372-1964391 | MS.gene22896:CDS | 40.0% | |
| CAAGATTTAGTTGGACGAAC+CGG | - | chr7.3:1963529-1963548 | None:intergenic | 40.0% | |
| CAAGTTAGAATGCGATCATC+TGG | - | chr7.3:1963816-1963835 | None:intergenic | 40.0% | |
| CAATCTAAACCACCTGATCA+AGG | - | chr7.3:1963878-1963897 | None:intergenic | 40.0% | |
| CACATCGAAAAATGGATCGA+CGG | + | chr7.3:1963012-1963031 | MS.gene22896:CDS | 40.0% | |
| CAGATGATCGCATTCTAACT+TGG | + | chr7.3:1963814-1963833 | MS.gene22896:intron | 40.0% | |
| CAGTATTGCGAACATCTACT+TGG | + | chr7.3:1962625-1962644 | MS.gene22896:intron | 40.0% | |
| CCAACTAAATCTTGGCTGTT+GGG | + | chr7.3:1963535-1963554 | MS.gene22896:intron | 40.0% | |
| CCACCTAGAAGAATACTCTT+TGG | - | chr7.3:1964339-1964358 | None:intergenic | 40.0% | |
| CGATATAAACGGAAGTCTTG+TGG | + | chr7.3:1962986-1963005 | MS.gene22896:CDS | 40.0% | |
| CTAAGCATGCATGTAAGGAT+GGG | + | chr7.3:1964094-1964113 | MS.gene22896:CDS | 40.0% | |
| CTCTTCTAAGCATGCATGTA+AGG | + | chr7.3:1964089-1964108 | MS.gene22896:CDS | 40.0% | |
| CTGAGAGAAGTAAGTGCTTA+TGG | + | chr7.3:1961694-1961713 | MS.gene22896:CDS | 40.0% | |
| CTTACATGCATGCTTAGAAG+AGG | - | chr7.3:1964091-1964110 | None:intergenic | 40.0% | |
| CTTGATCAGGTGGTTTAGAT+TGG | + | chr7.3:1963876-1963895 | MS.gene22896:intron | 40.0% | |
| GAAAAGTTCAACGCGACATA+TGG | + | chr7.3:1962356-1962375 | MS.gene22896:CDS | 40.0% | |
| GAAATGATTCCTTTCCACCA+TGG | + | chr7.3:1961814-1961833 | MS.gene22896:CDS | 40.0% | |
| GTTGGAACTCGTGAAAATTG+AGG | + | chr7.3:1962731-1962750 | MS.gene22896:CDS | 40.0% | |
| TACAATAGGGCTGATCATGA+TGG | + | chr7.3:1962538-1962557 | MS.gene22896:CDS | 40.0% | |
| TCCAACTAAATCTTGGCTGT+TGG | + | chr7.3:1963534-1963553 | MS.gene22896:intron | 40.0% | |
| TCTAAGCATGCATGTAAGGA+TGG | + | chr7.3:1964093-1964112 | MS.gene22896:CDS | 40.0% | |
| TCTTATTGGAGAATGGCCAA+AGG | + | chr7.3:1963353-1963372 | MS.gene22896:CDS | 40.0% | |
| TGAGAGAGTGGTTTCTCAAA+GGG | + | chr7.3:1960253-1960272 | MS.gene22896:CDS | 40.0% | |
| TGGAAAAATGGCTGCGAAAA+TGG | + | chr7.3:1963320-1963339 | MS.gene22896:CDS | 40.0% | |
| TGTGGCTTCACATCGAAAAA+TGG | + | chr7.3:1963004-1963023 | MS.gene22896:CDS | 40.0% | |
| TTGAGAGAGTGGTTTCTCAA+AGG | + | chr7.3:1960252-1960271 | MS.gene22896:CDS | 40.0% | |
| TTGGATTCTCTGTATCTGTC+CGG | + | chr7.3:1963507-1963526 | MS.gene22896:intron | 40.0% | |
| ! | AGAAGCTTTTGCAGATTGCA+GGG | + | chr7.3:1962305-1962324 | MS.gene22896:intron | 40.0% |
| ! | CTTCCGTTTATATCGGTTGT+TGG | - | chr7.3:1962981-1963000 | None:intergenic | 40.0% |
| ! | GCGTTGCAATTTTCCAAATG+TGG | - | chr7.3:1961756-1961775 | None:intergenic | 40.0% |
| ! | TAGAAGCTTTTGCAGATTGC+AGG | + | chr7.3:1962304-1962323 | MS.gene22896:intron | 40.0% |
| !! | CAAGTTCCTTTTAGCTGACT+GGG | + | chr7.3:1962417-1962436 | MS.gene22896:CDS | 40.0% |
| !! | CCAAAGAGTATTCTTCTAGG+TGG | + | chr7.3:1964336-1964355 | MS.gene22896:CDS | 40.0% |
| !! | CGTTGAACTTTTCTAGTCAG+AGG | - | chr7.3:1962349-1962368 | None:intergenic | 40.0% |
| !! | TCAAGTTCCTTTTAGCTGAC+TGG | + | chr7.3:1962416-1962435 | MS.gene22896:CDS | 40.0% |
| !! | TGCAGCTTGCTGATAGAATT+AGG | + | chr7.3:1964161-1964180 | MS.gene22896:CDS | 40.0% |
| !!! | TGTGCTGTTGCACTTTTTTG+TGG | + | chr7.3:1960311-1960330 | MS.gene22896:CDS | 40.0% |
| !!! | TTTCGCAGCCATTTTTCCAA+AGG | - | chr7.3:1963319-1963338 | None:intergenic | 40.0% |
| AAATCTTGGCTGTTGGGTCT+AGG | + | chr7.3:1963541-1963560 | MS.gene22896:intron | 45.0% | |
| AAGTGCGGTCTGAGTCAAAA+AGG | - | chr7.3:1961322-1961341 | None:intergenic | 45.0% | |
| ACTTGGAATGTTGCTCATGC+AGG | + | chr7.3:1962642-1962661 | MS.gene22896:intron | 45.0% | |
| ATCGAAAAATGGATCGACGG+TGG | + | chr7.3:1963015-1963034 | MS.gene22896:CDS | 45.0% | |
| ATCTCTCCCAGTCAGCTAAA+AGG | - | chr7.3:1962426-1962445 | None:intergenic | 45.0% | |
| ATGCGTAATTGCTTGAGTGC+AGG | - | chr7.3:1963726-1963745 | None:intergenic | 45.0% | |
| CCCAACAGCCAAGATTTAGT+TGG | - | chr7.3:1963538-1963557 | None:intergenic | 45.0% | |
| CCTTGGTACTCATGCAATCA+CGG | - | chr7.3:1963921-1963940 | None:intergenic | 45.0% | |
| CGGTTCGTCCAACTAAATCT+TGG | + | chr7.3:1963527-1963546 | MS.gene22896:intron | 45.0% | |
| CTTGCCTAATGCTCCACATT+TGG | + | chr7.3:1961740-1961759 | MS.gene22896:CDS | 45.0% | |
| CTTGGAATGTTGCTCATGCA+GGG | + | chr7.3:1962643-1962662 | MS.gene22896:intron | 45.0% | |
| GAATGTGAACGACCTTGATC+AGG | + | chr7.3:1963863-1963882 | MS.gene22896:intron | 45.0% | |
| GCAACAGCACATATCTGACA+TGG | - | chr7.3:1960302-1960321 | None:intergenic | 45.0% | |
| GCATGCAGAGTAGATACTTG+AGG | + | chr7.3:1962237-1962256 | MS.gene22896:intron | 45.0% | |
| GCATGCTTAGAAGAGGTCTT+GGG | - | chr7.3:1964084-1964103 | None:intergenic | 45.0% | |
| GCTCAAATTGCTGGAATGTG+TGG | + | chr7.3:1962466-1962485 | MS.gene22896:CDS | 45.0% | |
| GTAGCAATTCCAGCTAGATC+GGG | - | chr7.3:1962673-1962692 | None:intergenic | 45.0% | |
| GTTCTTGTGAAAGCTTGCCT+AGG | - | chr7.3:1962828-1962847 | None:intergenic | 45.0% | |
| TACCCTCAGATACAGCAAGA+GGG | - | chr7.3:1961869-1961888 | None:intergenic | 45.0% | |
| TACTACTCCTCTTGAGAGAG+TGG | + | chr7.3:1960241-1960260 | MS.gene22896:CDS | 45.0% | |
| TGAGAAACCACTCTCTCAAG+AGG | - | chr7.3:1960251-1960270 | None:intergenic | 45.0% | |
| TGCATGCTTAGAAGAGGTCT+TGG | - | chr7.3:1964085-1964104 | None:intergenic | 45.0% | |
| TGGGAGAGATTACCTGGATT+TGG | + | chr7.3:1962436-1962455 | MS.gene22896:CDS | 45.0% | |
| TTACCCTCAGATACAGCAAG+AGG | - | chr7.3:1961870-1961889 | None:intergenic | 45.0% | |
| TTCCTATACGTGTGTCGAGA+CGG | - | chr7.3:1961797-1961816 | None:intergenic | 45.0% | |
| TTTCTACCATTCTCCTCCTG+AGG | - | chr7.3:1964010-1964029 | None:intergenic | 45.0% | |
| ! | ATGTGGAGCATTAGGCAAGT+TGG | - | chr7.3:1961739-1961758 | None:intergenic | 45.0% |
| ! | CCATGCTGCCTTTGGAAAAA+TGG | + | chr7.3:1963308-1963327 | MS.gene22896:CDS | 45.0% |
| !! | CCATTTTTCCAAAGGCAGCA+TGG | - | chr7.3:1963311-1963330 | None:intergenic | 45.0% |
| !! | TTGGAGCTTTGGGTTCAACT+TGG | + | chr7.3:1964497-1964516 | MS.gene22896:CDS | 45.0% |
| !!! | TACAATAATTTTTTTTTTTA+GGG | + | chr7.3:1960852-1960871 | MS.gene22896:intron | 5.0% |
| AACCGTCTCGACACACGTAT+AGG | + | chr7.3:1961792-1961811 | MS.gene22896:CDS | 50.0% | |
| ACCCTCAGATACAGCAAGAG+GGG | - | chr7.3:1961868-1961887 | None:intergenic | 50.0% | |
| ACGTCGAAGCATATATGGGC+AGG | + | chr7.3:1962795-1962814 | MS.gene22896:CDS | 50.0% | |
| ATGGTCCAATCACAAGCCCT+GGG | + | chr7.3:1964057-1964076 | MS.gene22896:CDS | 50.0% | |
| CCACCATGGACAAGTAGGAA+AGG | + | chr7.3:1961828-1961847 | MS.gene22896:CDS | 50.0% | |
| CCGTGATTGCATGAGTACCA+AGG | + | chr7.3:1963918-1963937 | MS.gene22896:intron | 50.0% | |
| CCTTTCCACCATGGACAAGT+AGG | + | chr7.3:1961823-1961842 | MS.gene22896:CDS | 50.0% | |
| CCTTTCCTACTTGTCCATGG+TGG | - | chr7.3:1961831-1961850 | None:intergenic | 50.0% | |
| GAAAAATGGATCGACGGTGG+TGG | + | chr7.3:1963018-1963037 | MS.gene22896:CDS | 50.0% | |
| GCTGATCATGATGGCTGCAA+GGG | + | chr7.3:1962547-1962566 | MS.gene22896:CDS | 50.0% | |
| GTGAAAGCTTGCCTAGGAGT+TGG | - | chr7.3:1962822-1962841 | None:intergenic | 50.0% | |
| TATGGTCCAATCACAAGCCC+TGG | + | chr7.3:1964056-1964075 | MS.gene22896:CDS | 50.0% | |
| TCCAACGTGCGACATTTAGC+TGG | + | chr7.3:1963575-1963594 | MS.gene22896:intron | 50.0% | |
| TCCAGCTAAATGTCGCACGT+TGG | - | chr7.3:1963579-1963598 | None:intergenic | 50.0% | |
| TGAGCTCCAATGCCAAATCC+AGG | - | chr7.3:1962451-1962470 | None:intergenic | 50.0% | |
| TGAGGGTAATCATCCACCCT+GGG | + | chr7.3:1961881-1961900 | MS.gene22896:CDS | 50.0% | |
| TGTGAACGACCTTGATCAGG+TGG | + | chr7.3:1963866-1963885 | MS.gene22896:intron | 50.0% | |
| TTCGGGTCGCTACAGTTTGA+TGG | - | chr7.3:1962394-1962413 | None:intergenic | 50.0% | |
| ! | AGTATGAAGCTAGCCTGGGA+AGG | + | chr7.3:1964414-1964433 | MS.gene22896:CDS | 50.0% |
| ! | ATTGGTGTCCCCGTGAATCA+CGG | + | chr7.3:1963894-1963913 | MS.gene22896:intron | 50.0% |
| ! | CCTACTTGTCCATGGTGGAA+AGG | - | chr7.3:1961826-1961845 | None:intergenic | 50.0% |
| ! | GCTGAGTATGAAGCTAGCCT+GGG | + | chr7.3:1964410-1964429 | MS.gene22896:CDS | 50.0% |
| ! | GGCATTGGAGCTCAAATTGC+TGG | + | chr7.3:1962457-1962476 | MS.gene22896:CDS | 50.0% |
| ! | GTATGAAGCTAGCCTGGGAA+GGG | + | chr7.3:1964415-1964434 | MS.gene22896:CDS | 50.0% |
| AATCACGGCCCGTGATTCAC+GGG | - | chr7.3:1963906-1963925 | None:intergenic | 55.0% | |
| AGAAGAGGTCTTGGGACCCA+GGG | - | chr7.3:1964076-1964095 | None:intergenic | 55.0% | |
| AGAATGTCGCCAACGTGCGT+TGG | + | chr7.3:1962713-1962732 | MS.gene22896:CDS | 55.0% | |
| CAATCACGGCCCGTGATTCA+CGG | - | chr7.3:1963907-1963926 | None:intergenic | 55.0% | |
| CCCTCAGATACAGCAAGAGG+GGG | - | chr7.3:1961867-1961886 | None:intergenic | 55.0% | |
| CTGAGGGTAATCATCCACCC+TGG | + | chr7.3:1961880-1961899 | MS.gene22896:CDS | 55.0% | |
| GAGATGCCTCAGGAGGAGAA+TGG | + | chr7.3:1964001-1964020 | MS.gene22896:intron | 55.0% | |
| GCTGACTGGGAGAGATTACC+TGG | + | chr7.3:1962430-1962449 | MS.gene22896:CDS | 55.0% | |
| GGCTGAGTATGAAGCTAGCC+TGG | + | chr7.3:1964409-1964428 | MS.gene22896:CDS | 55.0% | |
| GGCTGATCATGATGGCTGCA+AGG | + | chr7.3:1962546-1962565 | MS.gene22896:CDS | 55.0% | |
| TAGAAGAGGTCTTGGGACCC+AGG | - | chr7.3:1964077-1964096 | None:intergenic | 55.0% | |
| TAGTGCTTCTCTCCCTTCCC+AGG | - | chr7.3:1964430-1964449 | None:intergenic | 55.0% | |
| TATGGGCAGGACCAACTCCT+AGG | + | chr7.3:1962808-1962827 | MS.gene22896:CDS | 55.0% | |
| TCACGAGTTCCAACGCACGT+TGG | - | chr7.3:1962725-1962744 | None:intergenic | 55.0% | |
| ! | CCCCCTCTTGCTGTATCTGA+GGG | + | chr7.3:1961864-1961883 | MS.gene22896:CDS | 55.0% |
| ! | TTGACCTCTGGAGATGCCTC+AGG | + | chr7.3:1963991-1964010 | MS.gene22896:intron | 55.0% |
| ! | TTGGTGTCCCCGTGAATCAC+GGG | + | chr7.3:1963895-1963914 | MS.gene22896:intron | 55.0% |
| ATCACGGCCCGTGATTCACG+GGG | - | chr7.3:1963905-1963924 | None:intergenic | 60.0% | |
| TGGGACCCAGGGCTTGTGAT+TGG | - | chr7.3:1964065-1964084 | None:intergenic | 60.0% | |
| ! | ACCTCTGGAGATGCCTCAGG+AGG | + | chr7.3:1963994-1964013 | MS.gene22896:intron | 60.0% |
| ! | GCCCCCTCTTGCTGTATCTG+AGG | + | chr7.3:1961863-1961882 | MS.gene22896:CDS | 60.0% |
| ! | TCCTCCTGAGGCATCTCCAG+AGG | - | chr7.3:1963998-1964017 | None:intergenic | 60.0% |
| CAGGGCTGTCCCGATCTAGC+TGG | + | chr7.3:1962661-1962680 | MS.gene22896:intron | 65.0% | |
| GCAGGATATGGGGCGATCCG+TGG | + | chr7.3:1962943-1962962 | MS.gene22896:intron | 65.0% | |
| !! | GAGGAGCGCCATGCTGCCTT+TGG | + | chr7.3:1963300-1963319 | MS.gene22896:CDS | 65.0% |
| ! | TCGACGGTGGTGGCGAGCAC+AGG | + | chr7.3:1963028-1963047 | MS.gene22896:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 1960218 | 1964532 | 1960218 | ID=MS.gene22896 |
| chr7.3 | mRNA | 1960218 | 1964532 | 1960218 | ID=MS.gene22896.t1;Parent=MS.gene22896 |
| chr7.3 | exon | 1960218 | 1960446 | 1960218 | ID=MS.gene22896.t1.exon1;Parent=MS.gene22896.t1 |
| chr7.3 | CDS | 1960218 | 1960446 | 1960218 | ID=cds.MS.gene22896.t1;Parent=MS.gene22896.t1 |
| chr7.3 | exon | 1961565 | 1961902 | 1961565 | ID=MS.gene22896.t1.exon2;Parent=MS.gene22896.t1 |
| chr7.3 | CDS | 1961565 | 1961902 | 1961565 | ID=cds.MS.gene22896.t1;Parent=MS.gene22896.t1 |
| chr7.3 | exon | 1962319 | 1962568 | 1962319 | ID=MS.gene22896.t1.exon3;Parent=MS.gene22896.t1 |
| chr7.3 | CDS | 1962319 | 1962568 | 1962319 | ID=cds.MS.gene22896.t1;Parent=MS.gene22896.t1 |
| chr7.3 | exon | 1962664 | 1962829 | 1962664 | ID=MS.gene22896.t1.exon4;Parent=MS.gene22896.t1 |
| chr7.3 | CDS | 1962664 | 1962829 | 1962664 | ID=cds.MS.gene22896.t1;Parent=MS.gene22896.t1 |
| chr7.3 | exon | 1962947 | 1963049 | 1962947 | ID=MS.gene22896.t1.exon5;Parent=MS.gene22896.t1 |
| chr7.3 | CDS | 1962947 | 1963049 | 1962947 | ID=cds.MS.gene22896.t1;Parent=MS.gene22896.t1 |
| chr7.3 | exon | 1963246 | 1963374 | 1963246 | ID=MS.gene22896.t1.exon6;Parent=MS.gene22896.t1 |
| chr7.3 | CDS | 1963246 | 1963374 | 1963246 | ID=cds.MS.gene22896.t1;Parent=MS.gene22896.t1 |
| chr7.3 | exon | 1964013 | 1964231 | 1964013 | ID=MS.gene22896.t1.exon7;Parent=MS.gene22896.t1 |
| chr7.3 | CDS | 1964013 | 1964231 | 1964013 | ID=cds.MS.gene22896.t1;Parent=MS.gene22896.t1 |
| chr7.3 | exon | 1964320 | 1964532 | 1964320 | ID=MS.gene22896.t1.exon8;Parent=MS.gene22896.t1 |
| chr7.3 | CDS | 1964320 | 1964532 | 1964320 | ID=cds.MS.gene22896.t1;Parent=MS.gene22896.t1 |
| Gene Sequence |
| Protein sequence |
