Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37131.t1 | XP_024642408.1 | 97 | 133 | 4 | 0 | 1 | 133 | 447 | 579 | 1.20E-63 | 252.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37131.t1 | Q9M895 | 76.7 | 133 | 31 | 0 | 1 | 133 | 461 | 593 | 1.2e-51 | 204.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37131.t1 | A0A072U7X6 | 97.0 | 133 | 4 | 0 | 1 | 133 | 447 | 579 | 9.0e-64 | 252.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene37131 | 0.831607 | 1.52E-55 | -1.69E-46 |
MS.gene049285 | MS.gene37131 | 0.829818 | 4.16E-55 | -1.69E-46 |
MS.gene049320 | MS.gene37131 | 0.815218 | 1.03E-51 | -1.69E-46 |
MS.gene049633 | MS.gene37131 | 0.800688 | 1.28E-48 | -1.69E-46 |
MS.gene050163 | MS.gene37131 | 0.800852 | 1.19E-48 | -1.69E-46 |
MS.gene050165 | MS.gene37131 | 0.808746 | 2.66E-50 | -1.69E-46 |
MS.gene050323 | MS.gene37131 | 0.807356 | 5.26E-50 | -1.69E-46 |
MS.gene050333 | MS.gene37131 | 0.836064 | 1.16E-56 | -1.69E-46 |
MS.gene050504 | MS.gene37131 | 0.824218 | 9.09E-54 | -1.69E-46 |
MS.gene050518 | MS.gene37131 | 0.815146 | 1.07E-51 | -1.69E-46 |
MS.gene050612 | MS.gene37131 | 0.839735 | 1.33E-57 | -1.69E-46 |
MS.gene050675 | MS.gene37131 | 0.811666 | 6.25E-51 | -1.69E-46 |
MS.gene05080 | MS.gene37131 | 0.819861 | 9.30E-53 | -1.69E-46 |
MS.gene050868 | MS.gene37131 | 0.808175 | 3.52E-50 | -1.69E-46 |
MS.gene050871 | MS.gene37131 | 0.805518 | 1.28E-49 | -1.69E-46 |
MS.gene050986 | MS.gene37131 | 0.808149 | 3.57E-50 | -1.69E-46 |
MS.gene051138 | MS.gene37131 | -0.803994 | 2.67E-49 | -1.69E-46 |
MS.gene051228 | MS.gene37131 | 0.802445 | 5.59E-49 | -1.69E-46 |
MS.gene051317 | MS.gene37131 | 0.807932 | 3.97E-50 | -1.69E-46 |
MS.gene052129 | MS.gene37131 | -0.819948 | 8.88E-53 | -1.69E-46 |
MS.gene052870 | MS.gene37131 | 0.807673 | 4.51E-50 | -1.69E-46 |
MS.gene052872 | MS.gene37131 | 0.81669 | 4.85E-52 | -1.69E-46 |
MS.gene052966 | MS.gene37131 | 0.800337 | 1.51E-48 | -1.69E-46 |
MS.gene053284 | MS.gene37131 | 0.812692 | 3.73E-51 | -1.69E-46 |
MS.gene053561 | MS.gene37131 | -0.81517 | 1.06E-51 | -1.69E-46 |
MS.gene054642 | MS.gene37131 | 0.832444 | 9.42E-56 | -1.69E-46 |
MS.gene054954 | MS.gene37131 | 0.822229 | 2.65E-53 | -1.69E-46 |
MS.gene055502 | MS.gene37131 | 0.821817 | 3.30E-53 | -1.69E-46 |
MS.gene055577 | MS.gene37131 | 0.832447 | 9.40E-56 | -1.69E-46 |
MS.gene055636 | MS.gene37131 | 0.805924 | 1.06E-49 | -1.69E-46 |
MS.gene055638 | MS.gene37131 | 0.804037 | 2.62E-49 | -1.69E-46 |
MS.gene055748 | MS.gene37131 | 0.821111 | 4.80E-53 | -1.69E-46 |
MS.gene055751 | MS.gene37131 | 0.822925 | 1.82E-53 | -1.69E-46 |
MS.gene056510 | MS.gene37131 | 0.807503 | 4.90E-50 | -1.69E-46 |
MS.gene056657 | MS.gene37131 | 0.801173 | 1.02E-48 | -1.69E-46 |
MS.gene056856 | MS.gene37131 | -0.809738 | 1.63E-50 | -1.69E-46 |
MS.gene05837 | MS.gene37131 | 0.80119 | 1.01E-48 | -1.69E-46 |
MS.gene058419 | MS.gene37131 | 0.804842 | 1.78E-49 | -1.69E-46 |
MS.gene058773 | MS.gene37131 | 0.838529 | 2.72E-57 | -1.69E-46 |
MS.gene059022 | MS.gene37131 | 0.824235 | 9.01E-54 | -1.69E-46 |
MS.gene059023 | MS.gene37131 | 0.813484 | 2.50E-51 | -1.69E-46 |
MS.gene059079 | MS.gene37131 | 0.805042 | 1.62E-49 | -1.69E-46 |
MS.gene059677 | MS.gene37131 | 0.816235 | 6.14E-52 | -1.69E-46 |
MS.gene059865 | MS.gene37131 | 0.816276 | 6.01E-52 | -1.69E-46 |
MS.gene060762 | MS.gene37131 | 0.817108 | 3.91E-52 | -1.69E-46 |
MS.gene061150 | MS.gene37131 | 0.821713 | 3.49E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37131.t1 | MTR_6g016600 | 96.992 | 133 | 4 | 0 | 1 | 133 | 447 | 579 | 2.54e-86 | 265 |
MS.gene37131.t1 | MTR_5g069780 | 52.459 | 122 | 54 | 2 | 1 | 120 | 447 | 566 | 8.94e-30 | 114 |
MS.gene37131.t1 | MTR_7g010800 | 49.206 | 126 | 62 | 1 | 1 | 126 | 339 | 462 | 2.07e-29 | 113 |
MS.gene37131.t1 | MTR_7g096060 | 41.860 | 129 | 75 | 0 | 1 | 129 | 374 | 502 | 4.58e-29 | 112 |
MS.gene37131.t1 | MTR_3g115110 | 48.092 | 131 | 66 | 1 | 1 | 131 | 382 | 510 | 9.24e-29 | 111 |
MS.gene37131.t1 | MTR_3g462930 | 49.180 | 122 | 58 | 2 | 1 | 120 | 438 | 557 | 3.07e-28 | 110 |
MS.gene37131.t1 | MTR_2g101290 | 43.651 | 126 | 69 | 1 | 1 | 126 | 548 | 671 | 3.41e-28 | 110 |
MS.gene37131.t1 | MTR_2g101290 | 43.651 | 126 | 69 | 1 | 1 | 126 | 548 | 671 | 4.62e-28 | 109 |
MS.gene37131.t1 | MTR_6g059690 | 42.063 | 126 | 73 | 0 | 1 | 126 | 331 | 456 | 3.82e-27 | 107 |
MS.gene37131.t1 | MTR_2g438140 | 45.038 | 131 | 69 | 2 | 1 | 131 | 419 | 546 | 1.91e-26 | 105 |
MS.gene37131.t1 | MTR_2g438140 | 45.038 | 131 | 69 | 2 | 1 | 131 | 359 | 486 | 2.03e-26 | 105 |
MS.gene37131.t1 | MTR_4g094662 | 45.038 | 131 | 69 | 2 | 1 | 131 | 362 | 489 | 2.74e-26 | 104 |
MS.gene37131.t1 | MTR_0376s0020 | 40.164 | 122 | 73 | 0 | 1 | 122 | 134 | 255 | 6.27e-26 | 103 |
MS.gene37131.t1 | MTR_7g078570 | 41.270 | 126 | 74 | 0 | 1 | 126 | 326 | 451 | 4.54e-25 | 100 |
MS.gene37131.t1 | MTR_3g104470 | 43.846 | 130 | 68 | 2 | 1 | 130 | 354 | 478 | 3.45e-24 | 98.6 |
MS.gene37131.t1 | MTR_1g028390 | 42.748 | 131 | 73 | 1 | 1 | 131 | 458 | 586 | 4.10e-24 | 98.2 |
MS.gene37131.t1 | MTR_4g064350 | 40.476 | 126 | 75 | 0 | 1 | 126 | 454 | 579 | 7.51e-24 | 97.8 |
MS.gene37131.t1 | MTR_5g075340 | 44.615 | 130 | 67 | 3 | 1 | 130 | 359 | 483 | 3.29e-23 | 95.9 |
MS.gene37131.t1 | MTR_3g104480 | 43.077 | 130 | 69 | 2 | 1 | 130 | 352 | 476 | 4.33e-23 | 95.5 |
MS.gene37131.t1 | MTR_1g044600 | 39.683 | 126 | 76 | 0 | 1 | 126 | 262 | 387 | 5.17e-23 | 95.1 |
MS.gene37131.t1 | MTR_3g096000 | 39.552 | 134 | 78 | 2 | 1 | 131 | 430 | 563 | 2.95e-22 | 93.2 |
MS.gene37131.t1 | MTR_7g089040 | 47.312 | 93 | 47 | 1 | 1 | 93 | 818 | 908 | 3.22e-21 | 90.1 |
MS.gene37131.t1 | MTR_7g089040 | 43.434 | 99 | 55 | 1 | 1 | 99 | 515 | 612 | 1.50e-13 | 68.2 |
MS.gene37131.t1 | MTR_1g063380 | 44.762 | 105 | 56 | 1 | 1 | 105 | 336 | 438 | 1.00e-20 | 88.6 |
MS.gene37131.t1 | MTR_1g063380 | 37.719 | 114 | 61 | 2 | 1 | 114 | 612 | 715 | 2.26e-17 | 79.0 |
MS.gene37131.t1 | MTR_3g117230 | 39.286 | 112 | 66 | 1 | 1 | 112 | 273 | 382 | 2.05e-20 | 87.0 |
MS.gene37131.t1 | MTR_7g101870 | 43.810 | 105 | 57 | 1 | 1 | 105 | 337 | 439 | 2.40e-20 | 87.4 |
MS.gene37131.t1 | MTR_7g101870 | 36.842 | 114 | 62 | 2 | 1 | 114 | 613 | 716 | 6.03e-17 | 77.8 |
MS.gene37131.t1 | MTR_2g007010 | 51.087 | 92 | 43 | 1 | 5 | 96 | 376 | 465 | 3.82e-20 | 87.0 |
MS.gene37131.t1 | MTR_2g007010 | 38.710 | 93 | 57 | 0 | 1 | 93 | 659 | 751 | 1.36e-12 | 65.1 |
MS.gene37131.t1 | MTR_8g056860 | 41.748 | 103 | 58 | 1 | 10 | 112 | 616 | 716 | 4.45e-20 | 86.7 |
MS.gene37131.t1 | MTR_1g083330 | 43.636 | 110 | 60 | 1 | 1 | 110 | 301 | 408 | 5.36e-20 | 86.3 |
MS.gene37131.t1 | MTR_4g033235 | 43.636 | 110 | 60 | 1 | 1 | 110 | 302 | 409 | 5.88e-20 | 85.9 |
MS.gene37131.t1 | MTR_3g112260 | 38.393 | 112 | 67 | 1 | 1 | 112 | 270 | 379 | 8.19e-20 | 85.5 |
MS.gene37131.t1 | MTR_1g095660 | 39.286 | 112 | 66 | 1 | 1 | 112 | 258 | 367 | 9.28e-20 | 85.1 |
MS.gene37131.t1 | MTR_8g023550 | 39.286 | 112 | 66 | 1 | 1 | 112 | 284 | 393 | 9.92e-20 | 85.1 |
MS.gene37131.t1 | MTR_2g095320 | 42.857 | 105 | 58 | 1 | 1 | 105 | 280 | 382 | 1.31e-19 | 85.5 |
MS.gene37131.t1 | MTR_5g075360 | 42.308 | 130 | 73 | 2 | 1 | 130 | 196 | 323 | 1.37e-19 | 85.1 |
MS.gene37131.t1 | MTR_5g075360 | 42.308 | 130 | 73 | 2 | 1 | 130 | 372 | 499 | 1.45e-19 | 85.1 |
MS.gene37131.t1 | MTR_5g075360 | 42.308 | 130 | 73 | 2 | 1 | 130 | 146 | 273 | 1.78e-19 | 84.7 |
MS.gene37131.t1 | MTR_5g075360 | 42.308 | 130 | 73 | 2 | 1 | 130 | 322 | 449 | 2.06e-19 | 84.7 |
MS.gene37131.t1 | MTR_8g099605 | 36.029 | 136 | 77 | 3 | 1 | 135 | 545 | 671 | 2.40e-19 | 84.7 |
MS.gene37131.t1 | MTR_8g099605 | 36.029 | 136 | 77 | 3 | 1 | 135 | 304 | 430 | 2.72e-19 | 84.3 |
MS.gene37131.t1 | MTR_2g078630 | 44.792 | 96 | 52 | 1 | 1 | 96 | 202 | 296 | 1.48e-18 | 82.4 |
MS.gene37131.t1 | MTR_2g078630 | 44.792 | 96 | 52 | 1 | 1 | 96 | 730 | 824 | 1.88e-18 | 82.0 |
MS.gene37131.t1 | MTR_5g074850 | 39.286 | 112 | 66 | 1 | 1 | 112 | 636 | 745 | 1.39e-17 | 79.7 |
MS.gene37131.t1 | MTR_7g099640 | 40.000 | 115 | 67 | 1 | 1 | 115 | 321 | 433 | 2.60e-17 | 78.6 |
MS.gene37131.t1 | MTR_7g088830 | 37.931 | 116 | 68 | 2 | 1 | 114 | 791 | 904 | 2.70e-17 | 79.0 |
MS.gene37131.t1 | MTR_7g088830 | 28.994 | 169 | 105 | 5 | 1 | 160 | 522 | 684 | 5.16e-12 | 63.5 |
MS.gene37131.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 270 | 362 | 3.05e-17 | 78.2 |
MS.gene37131.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 446 | 538 | 3.19e-17 | 78.6 |
MS.gene37131.t1 | MTR_1g069105 | 40.000 | 115 | 67 | 1 | 1 | 115 | 322 | 434 | 3.20e-17 | 78.2 |
MS.gene37131.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 403 | 495 | 3.78e-17 | 78.2 |
MS.gene37131.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 352 | 444 | 3.81e-17 | 78.2 |
MS.gene37131.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 420 | 512 | 4.20e-17 | 78.2 |
MS.gene37131.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 377 | 469 | 4.26e-17 | 78.2 |
MS.gene37131.t1 | MTR_3g023900 | 48.276 | 87 | 45 | 0 | 10 | 96 | 382 | 468 | 7.41e-17 | 77.4 |
MS.gene37131.t1 | MTR_7g099640 | 44.211 | 95 | 51 | 1 | 1 | 95 | 321 | 413 | 5.03e-16 | 74.7 |
MS.gene37131.t1 | MTR_4g094270 | 34.074 | 135 | 75 | 2 | 1 | 129 | 291 | 417 | 6.11e-16 | 74.7 |
MS.gene37131.t1 | MTR_2g095210 | 35.965 | 114 | 63 | 2 | 1 | 114 | 540 | 643 | 5.93e-15 | 72.0 |
MS.gene37131.t1 | MTR_3g023890 | 47.126 | 87 | 46 | 0 | 10 | 96 | 237 | 323 | 1.59e-14 | 70.9 |
MS.gene37131.t1 | MTR_7g088850 | 44.211 | 95 | 51 | 1 | 1 | 95 | 416 | 508 | 4.59e-14 | 69.3 |
MS.gene37131.t1 | MTR_4g067100 | 39.048 | 105 | 63 | 1 | 1 | 105 | 516 | 619 | 4.63e-12 | 63.5 |
MS.gene37131.t1 | MTR_4g067100 | 39.048 | 105 | 63 | 1 | 1 | 105 | 516 | 619 | 4.95e-12 | 63.5 |
MS.gene37131.t1 | MTR_3g092080 | 40.206 | 97 | 52 | 3 | 1 | 95 | 216 | 308 | 1.11e-11 | 62.4 |
MS.gene37131.t1 | MTR_3g092080 | 40.206 | 97 | 52 | 3 | 1 | 95 | 216 | 308 | 1.18e-11 | 62.0 |
MS.gene37131.t1 | MTR_3g062510 | 32.075 | 106 | 70 | 1 | 1 | 106 | 293 | 396 | 2.28e-11 | 61.6 |
MS.gene37131.t1 | MTR_8g099065 | 40.206 | 97 | 52 | 3 | 1 | 95 | 666 | 758 | 8.79e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37131.t1 | AT3G02450 | 76.692 | 133 | 31 | 0 | 1 | 133 | 461 | 593 | 1.26e-65 | 211 |
MS.gene37131.t1 | AT5G58870 | 51.200 | 125 | 57 | 2 | 1 | 123 | 460 | 582 | 1.57e-31 | 119 |
MS.gene37131.t1 | AT3G47060 | 50.400 | 125 | 58 | 2 | 1 | 123 | 456 | 578 | 8.54e-31 | 117 |
MS.gene37131.t1 | AT5G15250 | 42.515 | 167 | 90 | 3 | 1 | 164 | 354 | 517 | 1.22e-29 | 114 |
MS.gene37131.t1 | AT3G16290 | 41.667 | 132 | 75 | 1 | 1 | 132 | 540 | 669 | 4.37e-28 | 109 |
MS.gene37131.t1 | AT5G53170 | 45.802 | 131 | 69 | 1 | 1 | 131 | 488 | 616 | 4.75e-28 | 109 |
MS.gene37131.t1 | AT1G50250 | 47.328 | 131 | 67 | 1 | 1 | 131 | 392 | 520 | 7.72e-28 | 108 |
MS.gene37131.t1 | AT5G42270 | 45.802 | 131 | 69 | 1 | 1 | 131 | 380 | 508 | 4.73e-27 | 106 |
MS.gene37131.t1 | AT2G29080 | 41.085 | 129 | 76 | 0 | 1 | 129 | 452 | 580 | 5.27e-27 | 106 |
MS.gene37131.t1 | AT1G07510 | 41.085 | 129 | 76 | 0 | 1 | 129 | 458 | 586 | 8.97e-27 | 105 |
MS.gene37131.t1 | AT1G06430 | 45.038 | 131 | 69 | 2 | 1 | 131 | 350 | 477 | 3.44e-26 | 104 |
MS.gene37131.t1 | AT1G06430 | 45.038 | 131 | 69 | 2 | 1 | 131 | 350 | 477 | 3.44e-26 | 104 |
MS.gene37131.t1 | AT1G06430 | 45.038 | 131 | 69 | 2 | 1 | 131 | 350 | 477 | 3.44e-26 | 104 |
MS.gene37131.t1 | AT2G30950 | 44.275 | 131 | 70 | 2 | 1 | 131 | 357 | 484 | 4.94e-26 | 103 |
MS.gene37131.t1 | AT2G30950 | 44.275 | 131 | 70 | 2 | 1 | 131 | 357 | 484 | 4.94e-26 | 103 |
MS.gene37131.t1 | AT2G30950 | 44.275 | 131 | 70 | 2 | 1 | 131 | 357 | 484 | 4.94e-26 | 103 |
MS.gene37131.t1 | AT2G30950 | 44.275 | 131 | 70 | 2 | 1 | 131 | 361 | 488 | 5.05e-26 | 103 |
MS.gene37131.t1 | AT2G26140 | 45.802 | 131 | 69 | 1 | 1 | 131 | 354 | 482 | 1.15e-25 | 102 |
MS.gene37131.t1 | AT5G15250 | 40.940 | 149 | 63 | 2 | 1 | 126 | 354 | 500 | 5.16e-25 | 100 |
MS.gene37131.t1 | AT5G64580 | 38.806 | 134 | 79 | 2 | 1 | 131 | 447 | 580 | 1.99e-22 | 93.6 |
MS.gene37131.t1 | AT4G23940 | 35.135 | 148 | 88 | 2 | 1 | 142 | 568 | 713 | 5.67e-21 | 89.4 |
MS.gene37131.t1 | AT5G43010 | 40.179 | 112 | 65 | 1 | 1 | 112 | 270 | 379 | 1.05e-20 | 87.8 |
MS.gene37131.t1 | AT1G45000 | 40.179 | 112 | 65 | 1 | 1 | 112 | 270 | 379 | 1.16e-20 | 87.8 |
MS.gene37131.t1 | AT3G56690 | 47.312 | 93 | 47 | 1 | 1 | 93 | 854 | 944 | 1.27e-20 | 88.6 |
MS.gene37131.t1 | AT3G56690 | 44.792 | 96 | 52 | 1 | 1 | 96 | 512 | 606 | 5.28e-17 | 78.2 |
MS.gene37131.t1 | AT3G09840 | 43.810 | 105 | 57 | 1 | 1 | 105 | 335 | 437 | 3.92e-20 | 87.0 |
MS.gene37131.t1 | AT3G09840 | 36.842 | 114 | 62 | 2 | 1 | 114 | 612 | 715 | 1.48e-15 | 73.9 |
MS.gene37131.t1 | AT5G03340 | 43.810 | 105 | 57 | 1 | 1 | 105 | 335 | 437 | 4.00e-20 | 87.0 |
MS.gene37131.t1 | AT5G03340 | 37.374 | 99 | 60 | 1 | 1 | 99 | 611 | 707 | 9.63e-15 | 71.6 |
MS.gene37131.t1 | AT3G05530 | 43.636 | 110 | 60 | 1 | 1 | 110 | 302 | 409 | 4.81e-20 | 86.3 |
MS.gene37131.t1 | AT1G09100 | 43.636 | 110 | 60 | 1 | 1 | 110 | 301 | 408 | 8.01e-20 | 85.5 |
MS.gene37131.t1 | AT1G53750 | 39.286 | 112 | 66 | 1 | 1 | 112 | 299 | 408 | 1.29e-19 | 85.1 |
MS.gene37131.t1 | AT3G53230 | 41.905 | 105 | 59 | 1 | 1 | 105 | 336 | 438 | 2.14e-19 | 84.7 |
MS.gene37131.t1 | AT3G53230 | 40.404 | 99 | 57 | 1 | 1 | 99 | 612 | 708 | 1.34e-16 | 77.0 |
MS.gene37131.t1 | AT1G79560 | 37.500 | 112 | 68 | 1 | 1 | 112 | 627 | 736 | 3.10e-19 | 84.3 |
MS.gene37131.t1 | AT1G79560 | 37.500 | 112 | 68 | 1 | 1 | 112 | 627 | 736 | 3.49e-19 | 84.3 |
MS.gene37131.t1 | AT1G79560 | 37.500 | 112 | 68 | 1 | 1 | 112 | 627 | 736 | 3.64e-19 | 84.3 |
MS.gene37131.t1 | AT4G29040 | 41.739 | 115 | 65 | 1 | 1 | 115 | 319 | 431 | 1.62e-18 | 82.0 |
MS.gene37131.t1 | AT2G20140 | 41.739 | 115 | 65 | 1 | 1 | 115 | 319 | 431 | 4.70e-18 | 80.9 |
MS.gene37131.t1 | AT1G53780 | 37.069 | 116 | 71 | 1 | 1 | 116 | 471 | 584 | 3.20e-17 | 78.6 |
MS.gene37131.t1 | AT1G53780 | 37.069 | 116 | 71 | 1 | 1 | 116 | 471 | 584 | 3.20e-17 | 78.6 |
MS.gene37131.t1 | AT1G53780 | 37.069 | 116 | 71 | 1 | 1 | 116 | 492 | 605 | 3.51e-17 | 78.6 |
MS.gene37131.t1 | AT1G53780 | 37.069 | 116 | 71 | 1 | 1 | 116 | 470 | 583 | 3.66e-17 | 78.6 |
MS.gene37131.t1 | AT2G03670 | 45.263 | 95 | 50 | 1 | 1 | 95 | 418 | 510 | 1.36e-16 | 76.6 |
MS.gene37131.t1 | AT2G03670 | 31.765 | 170 | 92 | 5 | 6 | 166 | 161 | 315 | 1.17e-15 | 73.9 |
MS.gene37131.t1 | AT3G15120 | 40.625 | 96 | 56 | 1 | 1 | 96 | 852 | 946 | 3.81e-16 | 75.5 |
MS.gene37131.t1 | AT3G15120 | 40.625 | 96 | 56 | 1 | 1 | 96 | 862 | 956 | 3.81e-16 | 75.5 |
MS.gene37131.t1 | AT2G03670 | 31.765 | 170 | 92 | 5 | 6 | 166 | 161 | 315 | 1.06e-15 | 73.9 |
MS.gene37131.t1 | AT5G19990 | 33.333 | 135 | 76 | 2 | 1 | 129 | 235 | 361 | 5.52e-15 | 71.6 |
MS.gene37131.t1 | AT5G20000 | 34.884 | 129 | 82 | 1 | 1 | 129 | 293 | 419 | 6.11e-15 | 71.6 |
MS.gene37131.t1 | AT5G19990 | 33.333 | 135 | 76 | 2 | 1 | 129 | 293 | 419 | 6.29e-15 | 71.6 |
MS.gene37131.t1 | AT5G19990 | 33.333 | 135 | 76 | 2 | 1 | 129 | 293 | 419 | 6.29e-15 | 71.6 |
MS.gene37131.t1 | AT1G05910 | 39.640 | 111 | 66 | 1 | 1 | 111 | 514 | 623 | 1.63e-12 | 65.1 |
MS.gene37131.t1 | AT3G01610 | 45.977 | 87 | 41 | 2 | 10 | 96 | 380 | 460 | 1.85e-12 | 64.7 |
MS.gene37131.t1 | AT3G01610 | 34.545 | 110 | 68 | 3 | 1 | 108 | 656 | 763 | 1.43e-11 | 62.4 |
MS.gene37131.t1 | AT3G01610 | 45.977 | 87 | 41 | 2 | 10 | 96 | 380 | 460 | 2.09e-12 | 64.7 |
MS.gene37131.t1 | AT3G01610 | 34.545 | 110 | 68 | 3 | 1 | 108 | 656 | 763 | 1.56e-11 | 62.4 |
MS.gene37131.t1 | AT5G58290 | 33.019 | 106 | 69 | 1 | 1 | 106 | 286 | 389 | 8.81e-12 | 62.8 |
MS.gene37131.t1 | AT5G08470 | 39.048 | 105 | 59 | 2 | 1 | 105 | 963 | 1062 | 1.03e-11 | 62.8 |
MS.gene37131.t1 | AT5G08470 | 39.048 | 105 | 59 | 2 | 1 | 105 | 972 | 1071 | 1.08e-11 | 62.8 |
Find 48 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTATTGAAAGAGCAAAATT+TGG | 0.224551 | 6.2:+12037867 | MS.gene37131:CDS |
CGCTCTATCCACTGAGCTAC+AGG | 0.375810 | 6.2:+12038575 | MS.gene37131:CDS |
GCATTTGAGAGGAGTTCCTT+TGG | 0.379597 | 6.2:+12036731 | MS.gene37131:CDS |
TGTGGCAAGGGAAGATATAA+TGG | 0.388759 | 6.2:+12037842 | MS.gene37131:CDS |
TTTCTCCTTCCTTCTTCGTC+AGG | 0.391335 | 6.2:-12036696 | None:intergenic |
ATTGACGATGTTTGCAAGAT+CGG | 0.426563 | 6.2:-12036814 | None:intergenic |
ACTGAGCTACAGGCGCTGTC+TGG | 0.459515 | 6.2:+12038585 | MS.gene37131:CDS |
AGGGCTGGATCCAAGGCTTC+TGG | 0.459623 | 6.2:-12036630 | None:intergenic |
CGACCGGGACGACACAGGGC+TGG | 0.495070 | 6.2:-12036645 | None:intergenic |
TCTCGAGGAAAGTATATGTA+GGG | 0.504433 | 6.2:+12036670 | MS.gene37131:CDS |
ACGACACAGGGCTGGATCCA+AGG | 0.506054 | 6.2:-12036637 | None:intergenic |
AAACCTACGACCTTCTGCTT+AGG | 0.510716 | 6.2:+12038545 | MS.gene37131:CDS |
GAGAGGAGTTCCTTTGGAGG+AGG | 0.513124 | 6.2:+12036737 | MS.gene37131:CDS |
AAACCTACGACCTTCTGCTT+AGG | 0.514295 | 6.2:+12038521 | MS.gene37131:CDS |
GAATCAATGATAAGCAACTA+AGG | 0.515226 | 6.2:+12037889 | MS.gene37131:CDS |
GCGCTGTCTGGTGAAGCTAC+AGG | 0.519670 | 6.2:+12038597 | MS.gene37131:CDS |
AGAAACGACCGGGACGACAC+AGG | 0.521094 | 6.2:-12036650 | None:intergenic |
GAAACGACCGGGACGACACA+GGG | 0.522419 | 6.2:-12036649 | None:intergenic |
GATCCAGCCCTGTGTCGTCC+CGG | 0.528518 | 6.2:+12036642 | MS.gene37131:CDS |
TACTAACCGACCAGAAGCCT+TGG | 0.544542 | 6.2:+12036620 | MS.gene37131:CDS |
TTAATTGCCACAGTTACTGA+TGG | 0.552662 | 6.2:+12036780 | MS.gene37131:CDS |
TTTGAGAGGAGTTCCTTTGG+AGG | 0.552837 | 6.2:+12036734 | MS.gene37131:CDS |
TTCTCGAGGAAAGTATATGT+AGG | 0.558873 | 6.2:+12036669 | MS.gene37131:CDS |
TACTTTCCTCGAGAAACGAC+CGG | 0.560952 | 6.2:-12036661 | None:intergenic |
ACTTTCCTCGAGAAACGACC+GGG | 0.571156 | 6.2:-12036660 | None:intergenic |
ATATTAGCTGTGCATTTGAG+AGG | 0.572900 | 6.2:+12036720 | MS.gene37131:CDS |
AGTAAAATAAGCAAGGAGCT+TGG | 0.574154 | 6.2:+12037915 | MS.gene37131:CDS |
TTTCCTAAGCAGAAGGTCGT+AGG | 0.587678 | 6.2:-12038548 | None:intergenic |
GTAGGGGAACCTGACGAAGA+AGG | 0.589232 | 6.2:+12036687 | MS.gene37131:CDS |
TTTCCTAAGCAGAAGGTCGT+AGG | 0.592181 | 6.2:-12038524 | None:intergenic |
AGGTAGTGAAACTGTGGCAA+GGG | 0.592368 | 6.2:+12037830 | MS.gene37131:intron |
AAGGTCTAGTAAAATAAGCA+AGG | 0.598431 | 6.2:+12037908 | MS.gene37131:CDS |
GTCGTCCCGGTCGTTTCTCG+AGG | 0.603735 | 6.2:+12036655 | MS.gene37131:CDS |
GGGAACCTGACGAAGAAGGA+AGG | 0.608258 | 6.2:+12036691 | MS.gene37131:CDS |
ATGTTAGCATCCTCCTCCAA+AGG | 0.613955 | 6.2:-12036747 | None:intergenic |
CAGGTAGTGAAACTGTGGCA+AGG | 0.614725 | 6.2:+12037829 | MS.gene37131:intron |
GCGTCTGTTTCCTAAGCAGA+AGG | 0.615393 | 6.2:-12038555 | None:intergenic |
GCTTTGCTCGCTGCTCGAAG+AGG | 0.615478 | 6.2:+12036843 | MS.gene37131:CDS |
ACAGTTACTGATGGTCTCGT+AGG | 0.621604 | 6.2:+12036789 | MS.gene37131:CDS |
TTACATCAATGACTAATCAG+TGG | 0.629555 | 6.2:-12038626 | None:intergenic |
CTCGAGGAAAGTATATGTAG+GGG | 0.655243 | 6.2:+12036671 | MS.gene37131:CDS |
CTGGATCCAAGGCTTCTGGT+CGG | 0.665200 | 6.2:-12036626 | None:intergenic |
AGACAGCGCCTGTAGCTCAG+TGG | 0.665739 | 6.2:-12038583 | None:intergenic |
CTCTGCAGGTAGTGAAACTG+TGG | 0.666734 | 6.2:+12037824 | MS.gene37131:intron |
TACGAGACCATCAGTAACTG+TGG | 0.680129 | 6.2:-12036787 | None:intergenic |
ATTTGAATCAGAAATGAGAG+TGG | 0.693418 | 6.2:+12036584 | MS.gene37131:CDS |
TAGTTGCTGACAGAAATGGA+TGG | 0.707484 | 6.2:+12036561 | None:intergenic |
TCTTCGAGCAGCGAGCAAAG+CGG | 0.723854 | 6.2:-12036841 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATAATCAATTTCTATAAAA+GGG | - | chr6.2:12037590-12037609 | None:intergenic | 10.0% |
!!! | AAAAAACTAATTCATTTTAT+AGG | - | chr6.2:12038210-12038229 | None:intergenic | 10.0% |
!! | AAAAATATCATTTAATGTGA+AGG | - | chr6.2:12037746-12037765 | None:intergenic | 15.0% |
!! | ATTCAATAATAATAACCTAA+TGG | - | chr6.2:12038011-12038030 | None:intergenic | 15.0% |
!! | CACTTAATTCTATATAAATT+AGG | + | chr6.2:12036986-12037005 | MS.gene37131:intron | 15.0% |
!! | GTATAATCAATTTCTATAAA+AGG | - | chr6.2:12037591-12037610 | None:intergenic | 15.0% |
!! | TTATTATTGAATTCATGAAT+TGG | + | chr6.2:12038019-12038038 | MS.gene37131:intron | 15.0% |
!!! | ATTCTATATAAATTAGGTTT+TGG | + | chr6.2:12036992-12037011 | MS.gene37131:intron | 15.0% |
!!! | GAATTAGTTTTTTTTGATTT+TGG | + | chr6.2:12038217-12038236 | MS.gene37131:intron | 15.0% |
!! | AATTAAGTGTCACAAATATA+CGG | - | chr6.2:12036975-12036994 | None:intergenic | 20.0% |
!! | TTATCACTTCAATATTTGAA+AGG | + | chr6.2:12038269-12038288 | MS.gene37131:intron | 20.0% |
!!! | AAATATGCGAATTTCAATTT+TGG | - | chr6.2:12038381-12038400 | None:intergenic | 20.0% |
!!! | ACTTTATCTTTTGTTATAAG+AGG | + | chr6.2:12037394-12037413 | MS.gene37131:intron | 20.0% |
!!! | CTTTATCTTTTGTTATAAGA+GGG | + | chr6.2:12037395-12037414 | MS.gene37131:intron | 20.0% |
!!! | TTTATCTTTTGTTATAAGAG+GGG | + | chr6.2:12037396-12037415 | MS.gene37131:intron | 20.0% |
! | AATAAGTGTGAACAATGAAA+AGG | - | chr6.2:12038077-12038096 | None:intergenic | 25.0% |
! | ACAAATATCACTAAATGGAA+GGG | - | chr6.2:12038307-12038326 | None:intergenic | 25.0% |
! | ATTGTACAAGTAAATTTGAC+AGG | - | chr6.2:12038049-12038068 | None:intergenic | 25.0% |
! | CAATAATAATAACCTAATGG+TGG | - | chr6.2:12038008-12038027 | None:intergenic | 25.0% |
!! | AACAAAACTTTTTGCATACA+AGG | - | chr6.2:12038101-12038120 | None:intergenic | 25.0% |
!! | TAAAATCAAAGAGTGTATGA+AGG | + | chr6.2:12037075-12037094 | MS.gene37131:intron | 25.0% |
!! | TCTGAAGTAGTTATATCTAA+GGG | + | chr6.2:12037208-12037227 | MS.gene37131:intron | 25.0% |
!!! | AAAAGCATTTATGCTATAAG+TGG | + | chr6.2:12037626-12037645 | MS.gene37131:intron | 25.0% |
AAGGTCTAGTAAAATAAGCA+AGG | + | chr6.2:12037908-12037927 | MS.gene37131:CDS | 30.0% | |
ATTCGCATATTTGTCAATAG+AGG | + | chr6.2:12038389-12038408 | MS.gene37131:intron | 30.0% | |
ATTTGAATCAGAAATGAGAG+TGG | + | chr6.2:12036584-12036603 | MS.gene37131:CDS | 30.0% | |
CATTCACCAATGATAATTCT+TGG | + | chr6.2:12036911-12036930 | MS.gene37131:intron | 30.0% | |
GAATCAATGATAAGCAACTA+AGG | + | chr6.2:12037889-12037908 | MS.gene37131:CDS | 30.0% | |
GACAAATATCACTAAATGGA+AGG | - | chr6.2:12038308-12038327 | None:intergenic | 30.0% | |
GCTATTGAAAGAGCAAAATT+TGG | + | chr6.2:12037867-12037886 | MS.gene37131:CDS | 30.0% | |
GGTTGACAAATATCACTAAA+TGG | - | chr6.2:12038312-12038331 | None:intergenic | 30.0% | |
GTCTAACCAAGAATTATCAT+TGG | - | chr6.2:12036920-12036939 | None:intergenic | 30.0% | |
TCATTTAATGTGAAGGTGAA+AGG | - | chr6.2:12037739-12037758 | None:intergenic | 30.0% | |
!! | AGCTGATTTTATATGCTATC+TGG | + | chr6.2:12037120-12037139 | MS.gene37131:intron | 30.0% |
!! | CTCTGAAGTAGTTATATCTA+AGG | + | chr6.2:12037207-12037226 | MS.gene37131:intron | 30.0% |
!! | GCTGATTTTATATGCTATCT+GGG | + | chr6.2:12037121-12037140 | MS.gene37131:intron | 30.0% |
AGGAAACAAGATGACATACA+AGG | + | chr6.2:12037981-12038000 | MS.gene37131:intron | 35.0% | |
AGTAAAATAAGCAAGGAGCT+TGG | + | chr6.2:12037915-12037934 | MS.gene37131:CDS | 35.0% | |
ATACTCGTTAGACACATAAG+TGG | - | chr6.2:12038333-12038352 | None:intergenic | 35.0% | |
ATATTAGCTGTGCATTTGAG+AGG | + | chr6.2:12036720-12036739 | MS.gene37131:CDS | 35.0% | |
ATTGACGATGTTTGCAAGAT+CGG | - | chr6.2:12036817-12036836 | None:intergenic | 35.0% | |
ATTTCTATAAAAGGGCAACC+CGG | - | chr6.2:12037582-12037601 | None:intergenic | 35.0% | |
TATGCTATCTGGGAAACTTA+TGG | + | chr6.2:12037131-12037150 | MS.gene37131:intron | 35.0% | |
TTAATTGCCACAGTTACTGA+TGG | + | chr6.2:12036780-12036799 | MS.gene37131:CDS | 35.0% | |
! | ACGTGTTTGAGTTAACTATG+TGG | + | chr6.2:12037244-12037263 | MS.gene37131:intron | 35.0% |
! | TCTCGAGGAAAGTATATGTA+GGG | + | chr6.2:12036670-12036689 | MS.gene37131:CDS | 35.0% |
! | TTCTCGAGGAAAGTATATGT+AGG | + | chr6.2:12036669-12036688 | MS.gene37131:CDS | 35.0% |
AACAGCCTCTTGTGTAAAAC+AGG | + | chr6.2:12037484-12037503 | MS.gene37131:intron | 40.0% | |
AATCCATATTTGCACTCTGC+AGG | + | chr6.2:12037810-12037829 | MS.gene37131:intron | 40.0% | |
ACAGCCTCTTGTGTAAAACA+GGG | + | chr6.2:12037485-12037504 | MS.gene37131:intron | 40.0% | |
CATTGATGGGAAGAAGTGAT+AGG | + | chr6.2:12037961-12037980 | MS.gene37131:intron | 40.0% | |
CGTACAATACACCAAATGGT+GGG | + | chr6.2:12037516-12037535 | MS.gene37131:intron | 40.0% | |
CTCTTGTGTAAAACAGGGTA+AGG | + | chr6.2:12037490-12037509 | MS.gene37131:intron | 40.0% | |
GTTGTTGTCATGTGACTGAA+AGG | + | chr6.2:12037441-12037460 | MS.gene37131:intron | 40.0% | |
TCACTTCTTCCCATCAATGA+TGG | - | chr6.2:12037960-12037979 | None:intergenic | 40.0% | |
TGAAGGTGAAAGGTCAATGA+AGG | - | chr6.2:12037729-12037748 | None:intergenic | 40.0% | |
TGTGGCAAGGGAAGATATAA+TGG | + | chr6.2:12037842-12037861 | MS.gene37131:CDS | 40.0% | |
TGTTATAAGAGGGGTAACCT+TGG | + | chr6.2:12037405-12037424 | MS.gene37131:intron | 40.0% | |
! | CTCGAGGAAAGTATATGTAG+GGG | + | chr6.2:12036671-12036690 | MS.gene37131:CDS | 40.0% |
! | CTTACCCTGTTTTACACAAG+AGG | - | chr6.2:12037492-12037511 | None:intergenic | 40.0% |
AAACCTACGACCTTCTGCTT+AGG | + | chr6.2:12038521-12038540 | MS.gene37131:CDS | 45.0% | |
AAGCAGTTGTGAGGCTACTT+TGG | + | chr6.2:12037270-12037289 | MS.gene37131:intron | 45.0% | |
ACAGTTACTGATGGTCTCGT+AGG | + | chr6.2:12036789-12036808 | MS.gene37131:CDS | 45.0% | |
ACTAAAGCTCCCGCATATGT+AGG | - | chr6.2:12037556-12037575 | None:intergenic | 45.0% | |
AGGTAGTGAAACTGTGGCAA+GGG | + | chr6.2:12037830-12037849 | MS.gene37131:intron | 45.0% | |
ATGTTAGCATCCTCCTCCAA+AGG | - | chr6.2:12036750-12036769 | None:intergenic | 45.0% | |
CCATCAATGATGGCATCCAA+GGG | - | chr6.2:12037950-12037969 | None:intergenic | 45.0% | |
CCTTGGATGCCATCATTGAT+GGG | + | chr6.2:12037948-12037967 | MS.gene37131:intron | 45.0% | |
CTAAAGCTCCCGCATATGTA+GGG | - | chr6.2:12037555-12037574 | None:intergenic | 45.0% | |
CTACCTGCAGAGTGCAAATA+TGG | - | chr6.2:12037816-12037835 | None:intergenic | 45.0% | |
GAAAGGTCAATGAAGGCAGA+GGG | - | chr6.2:12037722-12037741 | None:intergenic | 45.0% | |
GACATACAAGGACCACCATT+AGG | + | chr6.2:12037993-12038012 | MS.gene37131:intron | 45.0% | |
GCATTTGAGAGGAGTTCCTT+TGG | + | chr6.2:12036731-12036750 | MS.gene37131:CDS | 45.0% | |
GCGTACAATACACCAAATGG+TGG | + | chr6.2:12037515-12037534 | MS.gene37131:intron | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | + | chr6.2:12037512-12037531 | MS.gene37131:intron | 45.0% | |
GTCATGTGACTGAAAGGTCA+CGG | + | chr6.2:12037447-12037466 | MS.gene37131:intron | 45.0% | |
TAAACATCTTCATACGCGCC+AGG | + | chr6.2:12038490-12038509 | MS.gene37131:intron | 45.0% | |
TACGAGACCATCAGTAACTG+TGG | - | chr6.2:12036790-12036809 | None:intergenic | 45.0% | |
TACTTTCCTCGAGAAACGAC+CGG | - | chr6.2:12036664-12036683 | None:intergenic | 45.0% | |
TCATGTGACTGAAAGGTCAC+GGG | + | chr6.2:12037448-12037467 | MS.gene37131:intron | 45.0% | |
TGAAAGGTCAATGAAGGCAG+AGG | - | chr6.2:12037723-12037742 | None:intergenic | 45.0% | |
TTTCCTAAGCAGAAGGTCGT+AGG | - | chr6.2:12038527-12038546 | None:intergenic | 45.0% | |
TTTCTCCTTCCTTCTTCGTC+AGG | - | chr6.2:12036699-12036718 | None:intergenic | 45.0% | |
TTTGAGAGGAGTTCCTTTGG+AGG | + | chr6.2:12036734-12036753 | MS.gene37131:CDS | 45.0% | |
! | CGTAGGTTTTCCTAAGCAGA+AGG | - | chr6.2:12038534-12038553 | None:intergenic | 45.0% |
! | TGGTCAGCTAAGAGTGTATG+TGG | - | chr6.2:12037669-12037688 | None:intergenic | 45.0% |
! | TTACACAAGAGGCTGTTTCC+AGG | - | chr6.2:12037481-12037500 | None:intergenic | 45.0% |
ACTTTCCTCGAGAAACGACC+GGG | - | chr6.2:12036663-12036682 | None:intergenic | 50.0% | |
AGCTTGGTAAGCTGTTCCCT+TGG | + | chr6.2:12037931-12037950 | MS.gene37131:intron | 50.0% | |
ATCTTCATACGCGCCAGGTA+GGG | + | chr6.2:12038495-12038514 | MS.gene37131:intron | 50.0% | |
ATGTGGCACAAGCAGTTGTG+AGG | + | chr6.2:12037261-12037280 | MS.gene37131:intron | 50.0% | |
CAACTTTACCAGTTGCGCCA+AGG | - | chr6.2:12037425-12037444 | None:intergenic | 50.0% | |
CAGGTAGTGAAACTGTGGCA+AGG | + | chr6.2:12037829-12037848 | MS.gene37131:intron | 50.0% | |
CCCATCAATGATGGCATCCA+AGG | - | chr6.2:12037951-12037970 | None:intergenic | 50.0% | |
CCCTTGGATGCCATCATTGA+TGG | + | chr6.2:12037947-12037966 | MS.gene37131:intron | 50.0% | |
CTCTGCAGGTAGTGAAACTG+TGG | + | chr6.2:12037824-12037843 | MS.gene37131:intron | 50.0% | |
GCGTCTGTTTCCTAAGCAGA+AGG | - | chr6.2:12038558-12038577 | None:intergenic | 50.0% | |
TACTAACCGACCAGAAGCCT+TGG | + | chr6.2:12036620-12036639 | MS.gene37131:CDS | 50.0% | |
!! | AAGCAGAAGGGGTGTCTGTA+GGG | - | chr6.2:12037699-12037718 | None:intergenic | 50.0% |
AAGGCAGAGGGAAGCAGAAG+GGG | - | chr6.2:12037710-12037729 | None:intergenic | 55.0% | |
AAGGTCACGGGTTCAAGTCC+TGG | + | chr6.2:12037460-12037479 | MS.gene37131:intron | 55.0% | |
CATATGTAGGGTCCGGGAAG+GGG | - | chr6.2:12037543-12037562 | None:intergenic | 55.0% | |
CATCTTCATACGCGCCAGGT+AGG | + | chr6.2:12038494-12038513 | MS.gene37131:intron | 55.0% | |
CGCTCTATCCACTGAGCTAC+AGG | + | chr6.2:12038575-12038594 | MS.gene37131:CDS | 55.0% | |
CTGGATCCAAGGCTTCTGGT+CGG | - | chr6.2:12036629-12036648 | None:intergenic | 55.0% | |
CTTCCCGGACCCTACATATG+CGG | + | chr6.2:12037543-12037562 | MS.gene37131:intron | 55.0% | |
GAAGGCAGAGGGAAGCAGAA+GGG | - | chr6.2:12037711-12037730 | None:intergenic | 55.0% | |
GCATATGTAGGGTCCGGGAA+GGG | - | chr6.2:12037544-12037563 | None:intergenic | 55.0% | |
GGGAACCTGACGAAGAAGGA+AGG | + | chr6.2:12036691-12036710 | MS.gene37131:CDS | 55.0% | |
GGTGTCTGTAGGGAGGCTAA+TGG | - | chr6.2:12037689-12037708 | None:intergenic | 55.0% | |
GTAGGGGAACCTGACGAAGA+AGG | + | chr6.2:12036687-12036706 | MS.gene37131:CDS | 55.0% | |
TCGTAGGTTTGACCCCTACC+TGG | - | chr6.2:12038511-12038530 | None:intergenic | 55.0% | |
TCTTCATACGCGCCAGGTAG+GGG | + | chr6.2:12038496-12038515 | MS.gene37131:intron | 55.0% | |
TCTTCGAGCAGCGAGCAAAG+CGG | - | chr6.2:12036844-12036863 | None:intergenic | 55.0% | |
TGAAGGCAGAGGGAAGCAGA+AGG | - | chr6.2:12037712-12037731 | None:intergenic | 55.0% | |
TTCCCGGACCCTACATATGC+GGG | + | chr6.2:12037544-12037563 | MS.gene37131:intron | 55.0% | |
! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr6.2:12037560-12037579 | MS.gene37131:intron | 55.0% |
! | GAGAGGAGTTCCTTTGGAGG+AGG | + | chr6.2:12036737-12036756 | MS.gene37131:CDS | 55.0% |
!! | GAAGCAGAAGGGGTGTCTGT+AGG | - | chr6.2:12037700-12037719 | None:intergenic | 55.0% |
ACGACACAGGGCTGGATCCA+AGG | - | chr6.2:12036640-12036659 | None:intergenic | 60.0% | |
AGAAACGACCGGGACGACAC+AGG | - | chr6.2:12036653-12036672 | None:intergenic | 60.0% | |
AGACAGCGCCTGTAGCTCAG+TGG | - | chr6.2:12038586-12038605 | None:intergenic | 60.0% | |
AGGGCTGGATCCAAGGCTTC+TGG | - | chr6.2:12036633-12036652 | None:intergenic | 60.0% | |
AGGGGTAACCTTGGCGCAAC+TGG | + | chr6.2:12037414-12037433 | MS.gene37131:intron | 60.0% | |
CGCATATGTAGGGTCCGGGA+AGG | - | chr6.2:12037545-12037564 | None:intergenic | 60.0% | |
CTCCCGCATATGTAGGGTCC+GGG | - | chr6.2:12037549-12037568 | None:intergenic | 60.0% | |
GAAACGACCGGGACGACACA+GGG | - | chr6.2:12036652-12036671 | None:intergenic | 60.0% | |
GCGCTGTCTGGTGAAGCTAC+AGG | + | chr6.2:12038597-12038616 | MS.gene37131:CDS | 60.0% | |
GCTCCCGCATATGTAGGGTC+CGG | - | chr6.2:12037550-12037569 | None:intergenic | 60.0% | |
GCTTTGCTCGCTGCTCGAAG+AGG | + | chr6.2:12036843-12036862 | MS.gene37131:CDS | 60.0% | |
! | ACTGAGCTACAGGCGCTGTC+TGG | + | chr6.2:12038585-12038604 | MS.gene37131:CDS | 60.0% |
! | CAAATGGTGGGACCCCTTCC+CGG | + | chr6.2:12037528-12037547 | MS.gene37131:intron | 60.0% |
! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr6.2:12037561-12037580 | MS.gene37131:intron | 60.0% |
!! | CAGAAGGGGTGTCTGTAGGG+AGG | - | chr6.2:12037696-12037715 | None:intergenic | 60.0% |
CGGGAAGGGGTCCCACCATT+TGG | - | chr6.2:12037530-12037549 | None:intergenic | 65.0% | |
GATCCAGCCCTGTGTCGTCC+CGG | + | chr6.2:12036642-12036661 | MS.gene37131:CDS | 65.0% | |
GTCGTCCCGGTCGTTTCTCG+AGG | + | chr6.2:12036655-12036674 | MS.gene37131:CDS | 65.0% | |
CGACCGGGACGACACAGGGC+TGG | - | chr6.2:12036648-12036667 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 12036576 | 12038636 | 12036576 | ID=MS.gene37131 |
chr6.2 | mRNA | 12036576 | 12038636 | 12036576 | ID=MS.gene37131.t1;Parent=MS.gene37131 |
chr6.2 | exon | 12036576 | 12036864 | 12036576 | ID=MS.gene37131.t1.exon1;Parent=MS.gene37131.t1 |
chr6.2 | CDS | 12036576 | 12036864 | 12036576 | ID=cds.MS.gene37131.t1;Parent=MS.gene37131.t1 |
chr6.2 | exon | 12037832 | 12037936 | 12037832 | ID=MS.gene37131.t1.exon2;Parent=MS.gene37131.t1 |
chr6.2 | CDS | 12037832 | 12037936 | 12037832 | ID=cds.MS.gene37131.t1;Parent=MS.gene37131.t1 |
chr6.2 | exon | 12038512 | 12038636 | 12038512 | ID=MS.gene37131.t1.exon3;Parent=MS.gene37131.t1 |
chr6.2 | CDS | 12038512 | 12038636 | 12038512 | ID=cds.MS.gene37131.t1;Parent=MS.gene37131.t1 |
Gene Sequence |
Protein sequence |